View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19342_high_9 (Length: 331)
Name: NF19342_high_9
Description: NF19342
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19342_high_9 |
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Alignment Details
Target: chr7 (Bit Score: 280; Significance: 1e-157; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 280; E-Value: 1e-157
Query Start/End: Original strand, 18 - 319
Target Start/End: Complemental strand, 21602002 - 21601704
Alignment:
| Q |
18 |
gtttggtcactgctttcattatgtactccactttttgcttttgttgagatgaacatgtatacttgatatatataaccttcttcaacgtgaaaataaaagt |
117 |
Q |
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| T |
21602002 |
gtttggtcactgctttcat---gtagtccactttttgcttttgttgagatgaacatgtatacttgatatatataaccttcttcaacgtgaaaataaaagt |
21601906 |
T |
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| Q |
118 |
tttgaggatgatgtttcttatttagtttattcaatcatcttcttgatatgattgtttattcgataattagtaaaacacataaatatttataatcatgtaa |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21601905 |
tttgaggatgatgtttcttatttagtttattcaatcatcttcttgatatgattgtttattcgataattagtaaaacacataaatatttataatcatgtaa |
21601806 |
T |
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| Q |
218 |
ttcaattctgattatacatcacagcaacaatatcctggattacagtctcctcctttatatccgatctcacggcacaacttgtcgcaatttccattctcag |
317 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21601805 |
ttcaattctgattatacatcacagcaacaataccctggattacagtctcctcctttatatccgatctcacggcacaacttgtcgcaatttccattctcag |
21601706 |
T |
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