View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19342_low_1 (Length: 915)

Name: NF19342_low_1
Description: NF19342
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19342_low_1
NF19342_low_1
[»] chr8 (53 HSPs)
chr8 (17-901)||(17083352-17084232)
chr8 (39-228)||(24927934-24928123)
chr8 (39-228)||(32303046-32303235)
chr8 (39-190)||(29108774-29108925)
chr8 (39-228)||(20399577-20399766)
chr8 (91-230)||(5858564-5858703)
chr8 (45-228)||(43113540-43113723)
chr8 (63-228)||(27932422-27932588)
chr8 (39-188)||(24869978-24870127)
chr8 (39-228)||(1063492-1063687)
chr8 (39-190)||(40248323-40248474)
chr8 (39-189)||(45236050-45236200)
chr8 (39-178)||(39445540-39445679)
chr8 (56-178)||(15173844-15173966)
chr8 (416-576)||(22171992-22172154)
chr8 (413-580)||(6094625-6094794)
chr8 (413-580)||(15326700-15326869)
chr8 (413-580)||(15507069-15507238)
chr8 (39-228)||(1012604-1012792)
chr8 (77-178)||(6388480-6388581)
chr8 (77-224)||(4230648-4230795)
chr8 (43-134)||(5700345-5700436)
chr8 (52-190)||(14155530-14155668)
chr8 (57-183)||(14687402-14687528)
chr8 (413-580)||(21941167-21941336)
chr8 (43-128)||(9476027-9476112)
chr8 (57-178)||(27777162-27777283)
chr8 (38-178)||(15068552-15068691)
chr8 (55-228)||(17469256-17469417)
chr8 (39-230)||(30481332-30481524)
chr8 (55-178)||(10297459-10297582)
chr8 (55-178)||(37960926-37961049)
chr8 (455-577)||(28548552-28548674)
chr8 (107-190)||(17220765-17220848)
chr8 (26-131)||(30904020-30904123)
chr8 (43-145)||(39379578-39379678)
chr8 (57-178)||(28345494-28345615)
chr8 (39-188)||(34139433-34139580)
chr8 (39-148)||(34777051-34777160)
chr8 (69-228)||(29416101-29416259)
chr8 (38-132)||(2183616-2183710)
chr8 (107-228)||(2075748-2075869)
chr8 (45-178)||(24568929-24569061)
chr8 (39-142)||(9642351-9642454)
chr8 (26-92)||(17108350-17108414)
chr8 (63-178)||(27056519-27056634)
chr8 (75-189)||(35215557-35215670)
chr8 (57-133)||(8545358-8545434)
chr8 (55-143)||(14186321-14186409)
chr8 (39-146)||(11255005-11255111)
chr8 (156-230)||(33631823-33631897)
chr8 (45-143)||(36131916-36132014)
chr8 (53-118)||(33631923-33631988)
[»] chr3 (72 HSPs)
chr3 (39-228)||(44953349-44953538)
chr3 (39-228)||(39655187-39655376)
chr3 (39-228)||(49580049-49580238)
chr3 (39-228)||(48390731-48390920)
chr3 (40-228)||(7469692-7469880)
chr3 (58-224)||(34119660-34119826)
chr3 (55-228)||(29284337-29284510)
chr3 (39-228)||(39728656-39728845)
chr3 (45-228)||(4557219-4557402)
chr3 (413-580)||(15341755-15341924)
chr3 (39-160)||(44172611-44172732)
chr3 (39-160)||(44179311-44179432)
chr3 (413-580)||(10572128-10572297)
chr3 (413-580)||(10578892-10579061)
chr3 (413-580)||(13249109-13249278)
chr3 (413-580)||(13517309-13517478)
chr3 (413-580)||(16482019-16482188)
chr3 (39-228)||(34025939-34026128)
chr3 (55-228)||(44639275-44639448)
chr3 (39-228)||(52572594-52572783)
chr3 (55-228)||(54317145-54317318)
chr3 (39-187)||(23580812-23580960)
chr3 (57-228)||(4015958-4016129)
chr3 (55-178)||(44252748-44252871)
chr3 (55-178)||(52198156-52198279)
chr3 (413-580)||(13211804-13211973)
chr3 (63-228)||(22535755-22535920)
chr3 (39-183)||(10043241-10043385)
chr3 (75-190)||(19111755-19111870)
chr3 (39-190)||(29842293-29842443)
chr3 (39-178)||(34154399-34154538)
chr3 (55-230)||(48305553-48305728)
chr3 (57-228)||(53631907-53632078)
chr3 (413-580)||(15357122-15357291)
chr3 (413-580)||(15600420-15600589)
chr3 (413-580)||(15606965-15607134)
chr3 (413-576)||(18520481-18520646)
chr3 (39-228)||(23546862-23547045)
chr3 (52-190)||(42243385-42243523)
chr3 (426-580)||(8490997-8491153)
chr3 (75-190)||(43582598-43582713)
chr3 (231-361)||(54385236-54385366)
chr3 (413-580)||(6110566-6110735)
chr3 (55-228)||(42758375-42758548)
chr3 (88-172)||(3414507-3414591)
chr3 (413-580)||(17780654-17780823)
chr3 (107-228)||(6738319-6738440)
chr3 (414-580)||(17136855-17137023)
chr3 (479-580)||(32056503-32056604)
chr3 (26-173)||(4553164-4553309)
chr3 (132-228)||(10371187-10371283)
chr3 (55-190)||(3385808-3385943)
chr3 (107-190)||(20087050-20087133)
chr3 (37-178)||(1772363-1772504)
chr3 (455-580)||(18523165-18523289)
chr3 (43-124)||(30904834-30904914)
chr3 (43-132)||(34593119-34593208)
chr3 (39-172)||(44106763-44106895)
chr3 (413-542)||(1647057-1647188)
chr3 (39-183)||(23154024-23154167)
chr3 (85-149)||(41937006-41937070)
chr3 (267-361)||(38701069-38701161)
chr3 (79-160)||(35687473-35687554)
chr3 (85-160)||(2490336-2490411)
chr3 (39-142)||(49025666-49025768)
chr3 (39-146)||(10823692-10823796)
chr3 (57-187)||(27252570-27252697)
chr3 (56-143)||(27937740-27937827)
chr3 (55-142)||(30616281-30616368)
chr3 (58-148)||(831013-831102)
chr3 (56-126)||(40796153-40796223)
chr3 (55-100)||(31271299-31271344)
[»] chr2 (53 HSPs)
chr2 (39-230)||(24414044-24414235)
chr2 (55-228)||(30846948-30847121)
chr2 (38-160)||(38342501-38342623)
chr2 (39-148)||(37999469-37999578)
chr2 (61-228)||(37106700-37106867)
chr2 (39-190)||(45115544-45115697)
chr2 (39-228)||(9632372-9632561)
chr2 (55-160)||(43371555-43371660)
chr2 (55-228)||(13705269-13705448)
chr2 (39-223)||(13830722-13830905)
chr2 (55-230)||(44746021-44746196)
chr2 (413-580)||(21329784-21329953)
chr2 (39-178)||(7314612-7314751)
chr2 (39-228)||(36128020-36128209)
chr2 (61-178)||(37472723-37472840)
chr2 (39-160)||(45256809-45256930)
chr2 (413-580)||(22791394-22791563)
chr2 (39-228)||(10208345-10208533)
chr2 (17-124)||(30696890-30696995)
chr2 (107-228)||(12341654-12341775)
chr2 (39-227)||(8915853-8916040)
chr2 (55-146)||(14331529-14331620)
chr2 (55-178)||(22900796-22900919)
chr2 (55-178)||(35248349-35248472)
chr2 (17-143)||(35965301-35965424)
chr2 (39-189)||(12193780-12193930)
chr2 (17-143)||(17845390-17845515)
chr2 (455-580)||(18797008-18797133)
chr2 (63-143)||(6027888-6027968)
chr2 (56-223)||(31942104-31942272)
chr2 (39-178)||(15546730-15546869)
chr2 (39-118)||(42798012-42798091)
chr2 (43-133)||(25210367-25210457)
chr2 (55-126)||(3547168-3547239)
chr2 (61-156)||(24051610-24051705)
chr2 (76-230)||(13954769-13954922)
chr2 (76-230)||(14095976-14096129)
chr2 (56-142)||(18485651-18485737)
chr2 (64-190)||(40734536-40734662)
chr2 (135-228)||(10920720-10920813)
chr2 (62-142)||(6164473-6164553)
chr2 (76-135)||(14540804-14540863)
chr2 (107-178)||(18106083-18106154)
chr2 (142-228)||(6027815-6027901)
chr2 (38-142)||(4427909-4428013)
chr2 (90-178)||(10212443-10212531)
chr2 (26-109)||(11958990-11959071)
chr2 (157-228)||(25213945-25214016)
chr2 (81-136)||(34320653-34320708)
chr2 (57-114)||(4961479-4961536)
chr2 (77-178)||(26755764-26755865)
chr2 (76-133)||(33175252-33175309)
chr2 (55-228)||(34214573-34214744)
[»] chr6 (55 HSPs)
chr6 (39-227)||(5863298-5863486)
chr6 (39-228)||(27534669-27534858)
chr6 (39-230)||(32853829-32854020)
chr6 (39-228)||(10142432-10142621)
chr6 (39-228)||(12141370-12141559)
chr6 (39-228)||(10187994-10188176)
chr6 (55-228)||(2367327-2367500)
chr6 (39-228)||(3483837-3484026)
chr6 (58-228)||(28079610-28079780)
chr6 (39-190)||(27738757-27738908)
chr6 (413-580)||(11652225-11652394)
chr6 (413-580)||(17690976-17691145)
chr6 (413-580)||(27380788-27380957)
chr6 (413-580)||(27471171-27471340)
chr6 (413-580)||(29309392-29309561)
chr6 (413-580)||(29316351-29316520)
chr6 (58-178)||(9458667-9458787)
chr6 (39-228)||(24225683-24225878)
chr6 (84-228)||(30986283-30986427)
chr6 (55-170)||(256464-256579)
chr6 (413-580)||(17684005-17684174)
chr6 (413-580)||(27297131-27297300)
chr6 (39-188)||(15498309-15498458)
chr6 (39-188)||(32532525-32532674)
chr6 (57-160)||(9458861-9458964)
chr6 (55-193)||(32053089-32053221)
chr6 (58-132)||(20349068-20349142)
chr6 (55-136)||(14410861-14410942)
chr6 (43-160)||(29341245-29341362)
chr6 (39-155)||(12309557-12309673)
chr6 (472-580)||(25536788-25536896)
chr6 (43-142)||(24602856-24602955)
chr6 (39-190)||(30816245-30816394)
chr6 (75-147)||(34178324-34178396)
chr6 (43-186)||(11762434-11762577)
chr6 (38-133)||(18908877-18908972)
chr6 (55-162)||(19367010-19367117)
chr6 (85-228)||(31496465-31496608)
chr6 (85-228)||(31501851-31501994)
chr6 (76-178)||(9442452-9442553)
chr6 (46-160)||(12678076-12678190)
chr6 (413-580)||(16559008-16559177)
chr6 (26-190)||(13769046-13769208)
chr6 (57-168)||(5108905-5109016)
chr6 (75-142)||(14034523-14034590)
chr6 (57-132)||(29199895-29199970)
chr6 (55-160)||(17546884-17546989)
chr6 (62-143)||(32959868-32959949)
chr6 (39-131)||(10925454-10925546)
chr6 (70-178)||(20610946-20611054)
chr6 (58-160)||(14254962-14255063)
chr6 (116-162)||(30624477-30624523)
chr6 (94-159)||(21875632-21875697)
chr6 (52-132)||(7393897-7393977)
chr6 (70-144)||(34346003-34346077)
[»] chr7 (82 HSPs)
chr7 (39-228)||(35074460-35074649)
chr7 (39-228)||(16866159-16866348)
chr7 (39-228)||(30650621-30650810)
chr7 (39-228)||(10072456-10072645)
chr7 (55-230)||(12980383-12980558)
chr7 (39-228)||(45885679-45885868)
chr7 (39-228)||(7779998-7780187)
chr7 (39-228)||(17885455-17885644)
chr7 (39-190)||(18125180-18125331)
chr7 (39-228)||(17851844-17852031)
chr7 (43-228)||(27850246-27850425)
chr7 (39-228)||(21702649-21702838)
chr7 (55-178)||(27063144-27063267)
chr7 (413-580)||(15152945-15153114)
chr7 (52-228)||(18825780-18825962)
chr7 (57-228)||(25905637-25905807)
chr7 (39-190)||(39455967-39456117)
chr7 (39-190)||(45380097-45380247)
chr7 (413-580)||(29328286-29328455)
chr7 (55-160)||(22973394-22973499)
chr7 (63-227)||(41103670-41103828)
chr7 (61-228)||(37218016-37218184)
chr7 (37-160)||(27063322-27063445)
chr7 (39-190)||(38139744-38139895)
chr7 (64-178)||(8906553-8906667)
chr7 (413-580)||(11535598-11535767)
chr7 (413-580)||(11542516-11542685)
chr7 (413-580)||(12751328-12751497)
chr7 (28-142)||(19440010-19440123)
chr7 (38-160)||(31425997-31426119)
chr7 (55-152)||(18683980-18684077)
chr7 (28-222)||(23475195-23475376)
chr7 (39-228)||(39316985-39317174)
chr7 (39-183)||(27896434-27896578)
chr7 (62-190)||(43507458-43507586)
chr7 (39-190)||(3226898-3227049)
chr7 (39-178)||(38152877-38153015)
chr7 (107-190)||(44658419-44658502)
chr7 (17-229)||(3774039-3774250)
chr7 (413-580)||(18561500-18561669)
chr7 (55-133)||(21750788-21750866)
chr7 (63-228)||(44734273-44734436)
chr7 (39-154)||(2630562-2630676)
chr7 (417-580)||(12739038-12739201)
chr7 (77-228)||(24753192-24753342)
chr7 (39-178)||(37182265-37182403)
chr7 (77-160)||(42908023-42908106)
chr7 (55-172)||(3157089-3157206)
chr7 (55-132)||(32546198-32546275)
chr7 (55-148)||(45708859-45708952)
chr7 (58-190)||(5377094-5377226)
chr7 (58-138)||(25979921-25980001)
chr7 (28-142)||(23533604-23533716)
chr7 (57-142)||(26622959-26623044)
chr7 (75-228)||(41741364-41741517)
chr7 (55-160)||(43218289-43218394)
chr7 (146-222)||(23457156-23457232)
chr7 (45-133)||(25782916-25783004)
chr7 (80-148)||(29292735-29292803)
chr7 (56-160)||(30839116-30839220)
chr7 (55-143)||(43550416-43550503)
chr7 (107-178)||(37195973-37196044)
chr7 (55-129)||(28309498-28309572)
chr7 (58-142)||(3920547-3920631)
chr7 (56-136)||(5022603-5022683)
chr7 (42-178)||(33841071-33841206)
chr7 (91-166)||(2472025-2472100)
chr7 (39-178)||(5565271-5565410)
chr7 (85-160)||(29014934-29015009)
chr7 (55-133)||(10995843-10995921)
chr7 (38-160)||(44845117-44845239)
chr7 (39-132)||(16811720-16811812)
chr7 (107-224)||(44985836-44985952)
chr7 (26-126)||(6557741-6557840)
chr7 (75-143)||(24425406-24425474)
chr7 (38-190)||(37103079-37103231)
chr7 (147-222)||(19439942-19440017)
chr7 (39-118)||(44794052-44794130)
chr7 (62-132)||(10990871-10990941)
chr7 (142-228)||(26004400-26004486)
chr7 (55-178)||(29157355-29157480)
chr7 (122-228)||(44785172-44785278)
[»] chr4 (91 HSPs)
chr4 (39-228)||(6382187-6382376)
chr4 (39-228)||(11028064-11028253)
chr4 (39-230)||(7608961-7609152)
chr4 (39-228)||(21423852-21424041)
chr4 (55-190)||(15987215-15987350)
chr4 (39-225)||(44317526-44317712)
chr4 (55-228)||(26564838-26565011)
chr4 (39-228)||(43893219-43893407)
chr4 (39-228)||(55826538-55826727)
chr4 (55-230)||(6481948-6482123)
chr4 (43-149)||(19534450-19534556)
chr4 (55-228)||(8843720-8843892)
chr4 (55-228)||(8856684-8856856)
chr4 (39-188)||(31752447-31752596)
chr4 (39-228)||(47550268-47550457)
chr4 (43-190)||(19883009-19883156)
chr4 (413-580)||(8858669-8858838)
chr4 (413-580)||(18262714-18262883)
chr4 (413-580)||(55613185-55613354)
chr4 (39-228)||(11122784-11122973)
chr4 (55-172)||(15733497-15733614)
chr4 (39-228)||(31918473-31918662)
chr4 (415-580)||(18269575-18269742)
chr4 (411-580)||(26970965-26971136)
chr4 (432-580)||(5707822-5707972)
chr4 (432-580)||(5714450-5714600)
chr4 (39-178)||(10302075-10302214)
chr4 (417-580)||(869099-869264)
chr4 (39-228)||(5902535-5902718)
chr4 (413-580)||(10620869-10621038)
chr4 (413-580)||(10627948-10628117)
chr4 (413-580)||(19926296-19926465)
chr4 (413-580)||(26964142-26964311)
chr4 (413-580)||(28392670-28392839)
chr4 (38-178)||(30672953-30673091)
chr4 (57-160)||(14605908-14606011)
chr4 (95-230)||(19548851-19548985)
chr4 (55-133)||(29527819-29527897)
chr4 (39-148)||(32585480-32585589)
chr4 (107-228)||(37349171-37349292)
chr4 (18-228)||(21956729-21956937)
chr4 (413-580)||(8845705-8845874)
chr4 (57-178)||(1866514-1866635)
chr4 (37-142)||(10574420-10574525)
chr4 (39-160)||(48459472-48459593)
chr4 (57-173)||(25941147-25941263)
chr4 (57-133)||(32596194-32596270)
chr4 (39-118)||(33516097-33516176)
chr4 (56-142)||(31782621-31782707)
chr4 (45-142)||(1724311-1724408)
chr4 (55-116)||(4652682-4652743)
chr4 (55-160)||(47103745-47103850)
chr4 (63-230)||(4741130-4741296)
chr4 (85-228)||(7334112-7334254)
chr4 (55-178)||(45065256-45065379)
chr4 (413-580)||(4426151-4426320)
chr4 (76-178)||(43309511-43309613)
chr4 (55-132)||(21544586-21544663)
chr4 (77-170)||(33615302-33615395)
chr4 (39-136)||(33916148-33916245)
chr4 (51-160)||(35304499-35304608)
chr4 (39-160)||(47239368-47239489)
chr4 (43-138)||(42907881-42907976)
chr4 (17-178)||(12075597-12075755)
chr4 (55-133)||(50684474-50684552)
chr4 (107-228)||(1724185-1724305)
chr4 (56-133)||(12825471-12825548)
chr4 (43-132)||(37246840-37246929)
chr4 (57-178)||(39086166-39086287)
chr4 (77-170)||(41914969-41915062)
chr4 (447-582)||(5667703-5667836)
chr4 (58-150)||(9929160-9929252)
chr4 (107-178)||(12505505-12505577)
chr4 (55-126)||(30266347-30266418)
chr4 (55-126)||(30285770-30285841)
chr4 (75-136)||(3505295-3505356)
chr4 (57-130)||(16575121-16575194)
chr4 (79-132)||(36306816-36306869)
chr4 (39-188)||(39046943-39047092)
chr4 (57-178)||(42299799-42299918)
chr4 (70-178)||(37107433-37107540)
chr4 (55-142)||(25298834-25298921)
chr4 (64-123)||(29035552-29035611)
chr4 (64-123)||(29047685-29047744)
chr4 (57-228)||(36919132-36919303)
chr4 (88-178)||(25265130-25265219)
chr4 (79-136)||(3516348-3516405)
chr4 (61-162)||(3737789-3737890)
chr4 (475-540)||(10689821-10689886)
chr4 (475-540)||(10903461-10903526)
chr4 (85-190)||(39375315-39375420)
[»] chr1 (61 HSPs)
chr1 (39-228)||(49250687-49250876)
chr1 (17-227)||(16903481-16903697)
chr1 (39-190)||(23490723-23490874)
chr1 (38-228)||(36187134-36187324)
chr1 (60-228)||(17134954-17135122)
chr1 (55-230)||(44615387-44615562)
chr1 (55-230)||(44793007-44793182)
chr1 (39-228)||(19572426-19572615)
chr1 (39-228)||(28297920-28298121)
chr1 (413-580)||(18532050-18532219)
chr1 (55-228)||(12495012-12495185)
chr1 (39-228)||(24236675-24236864)
chr1 (45-228)||(9982804-9982987)
chr1 (413-580)||(18252532-18252701)
chr1 (39-228)||(29936402-29936597)
chr1 (61-228)||(5181047-5181214)
chr1 (39-190)||(51421844-51421995)
chr1 (40-190)||(34611060-34611210)
chr1 (55-188)||(16408944-16409077)
chr1 (55-160)||(23058468-23058573)
chr1 (39-228)||(40087378-40087566)
chr1 (39-152)||(45866175-45866288)
chr1 (56-228)||(34673196-34673368)
chr1 (77-228)||(24710871-24711022)
chr1 (61-155)||(50426648-50426742)
chr1 (95-228)||(23968621-23968754)
chr1 (39-190)||(18354032-18354183)
chr1 (37-160)||(35069871-35069994)
chr1 (61-160)||(42707819-42707917)
chr1 (38-131)||(10450070-10450163)
chr1 (43-228)||(29871200-29871384)
chr1 (39-178)||(10778531-10778670)
chr1 (52-190)||(13798237-13798375)
chr1 (413-580)||(27130946-27131115)
chr1 (55-132)||(25154837-25154914)
chr1 (43-124)||(48125701-48125782)
chr1 (57-133)||(39219262-39219338)
chr1 (437-580)||(16358595-16358740)
chr1 (437-580)||(27310137-27310282)
chr1 (60-178)||(34085242-34085360)
chr1 (61-142)||(34060025-34060106)
chr1 (112-228)||(13390456-13390571)
chr1 (63-142)||(3627985-3628064)
chr1 (55-118)||(5283617-5283680)
chr1 (75-178)||(19003630-19003733)
chr1 (85-160)||(33293513-33293588)
chr1 (55-133)||(16237313-16237391)
chr1 (39-160)||(17091941-17092062)
chr1 (56-132)||(12718782-12718858)
chr1 (54-143)||(16433166-16433252)
chr1 (436-555)||(23507427-23507546)
chr1 (57-178)||(42728910-42729029)
chr1 (76-190)||(48576064-48576184)
chr1 (107-190)||(2514811-2514895)
chr1 (476-580)||(3855520-3855624)
chr1 (94-178)||(39616333-39616417)
chr1 (111-177)||(13020651-13020717)
chr1 (138-228)||(20774651-20774741)
chr1 (116-162)||(48312684-48312730)
chr1 (75-152)||(35936819-35936896)
chr1 (40-133)||(47644869-47644961)
[»] chr5 (53 HSPs)
chr5 (39-228)||(4920811-4921000)
chr5 (39-228)||(5908603-5908792)
chr5 (39-226)||(12866468-12866655)
chr5 (39-228)||(4583104-4583293)
chr5 (58-228)||(20973411-20973581)
chr5 (75-228)||(33727916-33728069)
chr5 (58-178)||(28568986-28569106)
chr5 (39-228)||(10127066-10127248)
chr5 (39-228)||(17853208-17853396)
chr5 (39-190)||(15890192-15890342)
chr5 (39-230)||(29245864-29246055)
chr5 (39-190)||(30996581-30996731)
chr5 (44-228)||(6155835-6156017)
chr5 (17-133)||(6810123-6810237)
chr5 (413-579)||(19714034-19714202)
chr5 (43-207)||(29664960-29665121)
chr5 (55-228)||(40517807-40517980)
chr5 (57-230)||(40187570-40187742)
chr5 (64-223)||(16311213-16311372)
chr5 (107-230)||(39422399-39422522)
chr5 (39-229)||(22694816-22695005)
chr5 (39-227)||(12834490-12834678)
chr5 (76-228)||(13401919-13402071)
chr5 (38-178)||(23044956-23045096)
chr5 (55-178)||(2681217-2681340)
chr5 (39-190)||(42987432-42987583)
chr5 (55-133)||(12712567-12712645)
chr5 (43-228)||(18207008-18207192)
chr5 (413-579)||(19706755-19706923)
chr5 (413-555)||(24701758-24701902)
chr5 (107-223)||(6092449-6092565)
chr5 (26-156)||(27900388-27900516)
chr5 (43-122)||(35194010-35194089)
chr5 (55-133)||(12773831-12773909)
chr5 (413-555)||(24694994-24695138)
chr5 (55-135)||(8020616-8020696)
chr5 (38-102)||(18116547-18116611)
chr5 (38-102)||(43523743-43523807)
chr5 (111-190)||(3564692-3564770)
chr5 (107-229)||(24207737-24207858)
chr5 (63-228)||(6369705-6369869)
chr5 (61-133)||(10822536-10822608)
chr5 (64-133)||(18451895-18451964)
chr5 (58-151)||(20634186-20634279)
chr5 (58-151)||(20650300-20650393)
chr5 (39-160)||(28045641-28045761)
chr5 (55-195)||(32574885-32575026)
chr5 (130-222)||(42717551-42717643)
chr5 (39-102)||(6092559-6092622)
chr5 (26-136)||(17153143-17153251)
chr5 (135-229)||(1218806-1218900)
chr5 (107-188)||(2412681-2412762)
chr5 (145-190)||(12457596-12457641)
[»] scaffold0390 (2 HSPs)
scaffold0390 (413-580)||(6470-6639)
scaffold0390 (413-580)||(13486-13655)
[»] scaffold0234 (2 HSPs)
scaffold0234 (413-580)||(1857-2026)
scaffold0234 (413-580)||(10748-10917)
[»] scaffold0036 (1 HSPs)
scaffold0036 (57-155)||(33396-33494)
[»] scaffold0005 (1 HSPs)
scaffold0005 (57-160)||(211367-211470)
[»] scaffold0433 (1 HSPs)
scaffold0433 (413-580)||(7609-7778)
[»] scaffold0008 (3 HSPs)
scaffold0008 (413-575)||(229927-230091)
scaffold0008 (55-178)||(67750-67873)
scaffold0008 (55-178)||(75593-75716)
[»] scaffold0220 (1 HSPs)
scaffold0220 (431-580)||(18789-18940)
[»] scaffold0186 (1 HSPs)
scaffold0186 (413-580)||(25526-25695)
[»] scaffold0014 (1 HSPs)
scaffold0014 (107-230)||(14096-14218)
[»] scaffold0022 (1 HSPs)
scaffold0022 (58-148)||(90601-90691)
[»] scaffold0184 (1 HSPs)
scaffold0184 (55-160)||(2970-3075)
[»] scaffold0198 (1 HSPs)
scaffold0198 (26-132)||(20749-20853)
[»] scaffold0013 (2 HSPs)
scaffold0013 (55-160)||(128103-128208)
scaffold0013 (55-113)||(105498-105556)
[»] scaffold0009 (1 HSPs)
scaffold0009 (64-172)||(107361-107469)
[»] scaffold0063 (1 HSPs)
scaffold0063 (475-580)||(6024-6129)
[»] scaffold0182 (1 HSPs)
scaffold0182 (56-136)||(16969-17049)
[»] scaffold0157 (1 HSPs)
scaffold0157 (107-178)||(14900-14972)
[»] scaffold0059 (1 HSPs)
scaffold0059 (55-113)||(70096-70154)
[»] scaffold0002 (1 HSPs)
scaffold0002 (116-162)||(449764-449810)
[»] scaffold0027 (1 HSPs)
scaffold0027 (95-228)||(7738-7870)
[»] scaffold0519 (1 HSPs)
scaffold0519 (39-146)||(10282-10388)
[»] scaffold0189 (1 HSPs)
scaffold0189 (39-125)||(4243-4329)
[»] scaffold0795 (1 HSPs)
scaffold0795 (97-178)||(267-348)


Alignment Details
Target: chr8 (Bit Score: 692; Significance: 0; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 692; E-Value: 0
Query Start/End: Original strand, 17 - 901
Target Start/End: Complemental strand, 17084232 - 17083352
Alignment:
Q  17 aaaaagggcaataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgtt 116  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||||  ||||||||||||||||||||||||||||||||    
T  17084232 aaaaaggacaataaattgattttttttacattcgtgatgggtttggatatgagttcggggtgggtatctatatccccgttacccgtctcgtacccgtgtt 17084133  T
Q  117 ttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagt 216  Q
    |||||||||| ||||||      ||||| | ||||||| ||||||| ||||||||||||||||||| ||||||| || |||| |||||||| ||||| ||    
T  17084132 ttaaaatcggagaaaac------ccaaatcaaaacccagtcaaagcggggaaaacccgtcaacttgaatttggttcgggtgggtacccacaagtatgggt 17084039  T
Q  217 tttgttgccatgtcgagatactgatagagtgagtgagcactcatttgtggatggactaacgtaaaatctgttcatattatttgatcaatggttttaagtt 316  Q
    ||||||| |||||| |||||||| |||||||||||||||||||| ||||||||||||| |||||||| ||| ||| ||||||||||||||||||||||||    
T  17084038 tttgttgtcatgtctagatactggtagagtgagtgagcactcatgtgtggatggactaccgtaaaatatgtacatcttatttgatcaatggttttaagtt 17083939  T
Q  317 aatgggtccaagttggaccaatttttcagtgggtccaaattaaacgccacatacctttaatattatagacaatgattattaagtgnnnnnnntattatgt 416  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||| ||||    
T  17083938 aatgggtccaagttggaccaatttttcaatgggtccaaattaaacgccacatacctttaatattatagacaatgattattaagtgaaaaaaatatgatgt 17083839  T
Q  417 gatctaacaaaacatttctttgataatgattgtttatgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatccttgtcta 516  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||| ||||||    
T  17083838 gatctaacaaaacatttccttgataatgattgtttatgattaccctttttctttaatgtctacattgaacacaaggcatacaccatgtcatccctgtcta 17083739  T
Q  517 gtttaatattgaacccatagacatttttgctgatatgtaagaagcgcaaattccatctaggtcagtatactaagaccctccatttccgccattaccaaca 616  Q
    |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17083738 gtttaatattgaacccatagacatttttgctgttatgtaagaagcacaaattccatctaggtcagtatactaagaccctccatttccgccattaccaaca 17083639  T
Q  617 cccttctagcttttttcttgccaccaaagtttgtgttacccgaaataaccatatttatgttccttacatggactataatcga--tgctttcattatctat 714  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  17083638 cccttctagcttttttcttgccaccaaagtttgtgttacccgaaataactatatttatgttccttacatggactataatcgatgtgctttcattatctat 17083539  T
Q  715 gctcagaatcagaaattgctgggtttaaaaattggactctgccacagttggatctatattagattcctagcaaagaaacatttaggaagcactataaatc 814  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17083538 gctcagaatcagaaattgctgggtttaaaaattggactctgccacagttggatctatattagattcctagcaaagaaacatttaggaagcactataaatc 17083439  T
Q  815 tttgtcttacattcaagttaaggtcaaaacaattggatgctatattgtttatcaaatttcaatgaccctgcaaacctattgtatatt 901  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17083438 tttgtcttacattcaagttaaggtcaaaacaattggatgctatattgtttatcaaatttcaatgaccctgcaaacctattgtatatt 17083352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 39 - 228
Target Start/End: Original strand, 24927934 - 24928123
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || ||||||||||||| ||||| ||||||||| ||||| ||||||||||||||| |||||||||||  | ||| |||||||| ||||    
T  24927934 tttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtctcatacccgtgtttcgagatcagggaaaacccata 24928033  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    |||| ||||||||||| ||||| | ||||||||||||||| |||| |||||| || | || || || | |||||| ||||||||||||||    
T  24928034 cccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgggcgggtaaccgcgggtatgggttttgttgccatg 24928123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 39 - 228
Target Start/End: Original strand, 32303046 - 32303235
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || ||||||||||||| ||||| ||||||||| ||||| ||||||||||||| | |||||||||||  | |||||||||||| ||||    
T  32303046 tttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaacccata 32303145  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    |||| ||||||||||| ||||| | ||||||||||||||| |||| |||| | || | || || |||| |||||| ||||||||||||||    
T  32303146 cccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttgtttcgggcgggtaaccacgggtatgggttttgttgccatg 32303235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 39 - 190
Target Start/End: Complemental strand, 29108925 - 29108774
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || |||| |||||||| ||||| ||||||||| ||||| ||||||||||||| | ||||| ||||||||||||||| ||||| ||||    
T  29108925 tttttacatttgggacgggtatgggtatgggttcggggtgggtacatatatacccgttacccgtcccatacccatgttttaaaatcgggaaaaacccata 29108826  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 190  Q
    |||| ||||||||||| ||||| | ||||||||||||||| |||| ||||||    
T  29108825 cccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggt 29108774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 39 - 228
Target Start/End: Original strand, 20399577 - 20399766
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    ||||| |||||| || ||||||||| ||| ||||| ||||||||  ||||| ||||||||||||| | |||||||||||| ||||||| |||||| || |    
T  20399577 tttttgcattcgggacgggtttgggaatgggttcggggtgggtatctatatacccgttacccgtcccatacccgtgttttgaaatcggagaaaacccaaa 20399676  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    |||| ||||||||||| ||||| | |||||||| |||||| |||| |||||| |||| || || |||| |||||  ||||||||||||||    
T  20399677 cccatacccaaacccagtcaaaacggggaaaactcgtcaaattgggtttggttcgagcgggtaaccacgggtattggttttgttgccatg 20399766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 91 - 230
Target Start/End: Complemental strand, 5858703 - 5858564
Alignment:
Q  91 cccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 190  Q
    ||||||||||||| | |||||||||||| |||||||| ||||| || ||||| ||||||||||||||||| | ||||||||||||||| |||||||||||    
T  5858703 cccgttacccgtcccatacccgtgtttttaaatcgggaaaaacccaaacccatacccaaacccaatcaaaacggggaaaacccgtcaaattggatttggt 5858604  T
Q  191 ccgagtggctacccacaggtatgagttttgttgccatgtc 230  Q
     || || | || |||||||||||  |||||||||||||||    
T  5858603 tcgggtaggtaaccacaggtatggattttgttgccatgtc 5858564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 45 - 228
Target Start/End: Complemental strand, 43113723 - 43113540
Alignment:
Q  45 cattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaa 144  Q
    |||||| || || |||||||||||||||| ||||||||| ||||| || |||||||||| | | |||||||||| |||||||| ||||| ||  | || |    
T  43113723 cattcgagacggatttgggtatgagttcggggtgggtacctatatacctgttacccgtcccatgcccgtgttttgaaatcgggaaaaacccaatctcata 43113624  T
Q  145 cccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    | |||||||| |||||||||||||||||||| || |||| |||||| || |||| || |||| |||||||||||| ||||||||    
T  43113623 cgcaaacccagtcaaagcagggaaaacccgttaaattgggtttggttcgggtgggtaaccacgggtatgagttttattgccatg 43113540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 63 - 228
Target Start/End: Original strand, 27932422 - 27932588
Alignment:
Q  63 gtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagc 162  Q
    ||||| ||||| ||||||||| ||||| |||||||| |||| | |||||||||||| |||||||||||||| |||||||| ||||||||||| ||||| |    
T  27932422 gtatgggttcggggtgggtacctatatacccgttactcgtcccatacccgtgttttgaaatcggggaaaacccatacccatacccaaacccagtcaaaac 27932521  T
Q  163 agggaaaacccgtcaacttggatttggtccgagtggct-acccacaggtatgagttttgttgccatg 228  Q
     ||||||||||||||| |||| |||||| || | || | |||| | |||||||||||||||| ||||    
T  27932522 ggggaaaacccgtcaaattgggtttggttcgggcgggtaacccgcgggtatgagttttgttgtcatg 27932588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 39 - 188
Target Start/End: Complemental strand, 24870127 - 24869978
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || |||||| |||||| | ||| ||||||||| ||||| ||||||||||||| | ||||||||||||||||||||||||||||||||    
T  24870127 tttttacatttgggacgggtttaggtatgggctcggggtgggtacctatatacccgttacccgtcacatacccgtgttttaaaatcggggaaaactcata 24870028  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttg 188  Q
     ||| |||||||  || ||||| | || |||||||||||| |||||||||    
T  24870027 gccatacccaaattcagtcaaaacgggaaaaacccgtcaaattggatttg 24869978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 39 - 228
Target Start/End: Original strand, 1063492 - 1063687
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaa------a 132  Q
    |||||||| | | ||||| |||||||||||||||| ||||||||||||||| ||||||| ||||| | |||||||||||| |||||||| |||      |    
T  1063492 tttttacacttgggatggatttgggtatgagttcggggtgggtacttatatacccgttaaccgtcccatacccgtgttttgaaatcgggaaaaacccata 1063591  T
Q  133 ctcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    | |||||||| ||||| ||||| ||||| | ||||||||||||||| | || |||||| || | || || |||| |||||||||||||||||||||    
T  1063592 cccatacccacacccacacccagtcaaaacggggaaaacccgtcaaatcgggtttggttcgggcgggtaaccacgggtatgagttttgttgccatg 1063687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 39 - 190
Target Start/End: Complemental strand, 40248474 - 40248323
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || || | |||||||| ||||| | ||||||| ||||| ||||||| ||||||| |||||||||||| ||||||||||||||  |||    
T  40248474 tttttacatttgggacggatatgggtatgggttcgggatgggtacctatatacccgttatccgtctcatacccgtgttttgaaatcggggaaaacatata 40248375  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 190  Q
    |||| ||||||||||| ||||| | || |||||||||||| |||| ||||||    
T  40248374 cccatacccaaacccagtcaaaacgggaaaaacccgtcaaattgggtttggt 40248323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 39 - 189
Target Start/End: Original strand, 45236050 - 45236200
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || |||| ||| |||| ||||| ||||||||| ||||| ||| ||||||||| | |||||||||||| ||||| |||||||||||||    
T  45236050 tttttacatttgggacgggtatggatatgggttcggggtgggtacctatatacccattacccgtcccatacccgtgttttgaaatcagggaaaactcata 45236149  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttgg 189  Q
    |||| || ||||| || ||||| | ||||||||||||||| |||| |||||    
T  45236150 cccatactcaaactcagtcaaaacggggaaaacccgtcaaattggttttgg 45236200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 39 - 178
Target Start/End: Complemental strand, 39445679 - 39445540
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || |||| |||||||||||||| ||||||||| ||||  ||||||||| ||| | |||||||||||| |||||||| ||||| ||||    
T  39445679 tttttacatttgggacgggtatgggtatgagttcggggtgggtacctataaacccgttacctgtcccatacccgtgttttgaaatcgggaaaaacccata 39445580  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaa 178  Q
    |||| ||||||||| | ||||| | ||||||| |||||||    
T  39445579 cccatacccaaacctagtcaaaacggggaaaatccgtcaa 39445540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 56 - 178
Target Start/End: Complemental strand, 15173966 - 15173844
Alignment:
Q  56 ggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaa 155  Q
    |||||| ||||||||||||||||| ||| |||||| |  ||||||||| ||||||||| |||| |||||||| |||||||| || || |||||||||||     
T  15173966 ggtttgagtatgagttcgaggtggatacatatatctcatttacccgtcccgtacccgtattttgaaatcgggaaaaactcaaacacatacccaaacccag 15173867  T
Q  156 tcaaagcagggaaaacccgtcaa 178  Q
    ||||| ||| |||||||||||||    
T  15173866 tcaaatcagagaaaacccgtcaa 15173844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 416 - 576
Target Start/End: Complemental strand, 22172154 - 22171992
Alignment:
Q  416 tgatctaacaaaacatttctttgataatgat--tgtttatgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatccttgt 513  Q
    |||||| ||||||| ||||| ||||||||||  ||| ||| ||||||||||| |  | ||||||||||| ||||||||||||| ||| ||| ||||||||    
T  22172154 tgatctgacaaaacctttctgtgataatgatcatgtgtataattacccttttgccctcatgtctatattgaacacaaggcatagaccgtgtcatccttgt 22172055  T
Q  514 ctagtttaatattgaacccatagacatttttgctgatatgtaagaagcgcaaattccatctag 576  Q
    |||||| |||||||  ||  ||||||||| | ||| |||||| || | |||||||||||||||    
T  22172054 ctagttcaatattgggcctgtagacatttctcctgttatgtaggaggggcaaattccatctag 22171992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 413 - 580
Target Start/End: Complemental strand, 6094794 - 6094625
Alignment:
Q  413 atgtgatctaacaaaacatttctttgataatgat--tgtttatgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatcct 510  Q
    ||||||||| || |||| ||||| ||||||||||  ||| ||| |||||| |||| |  | ||||||||||| ||||||||||||| ||| ||| |||||    
T  6094794 atgtgatctgacgaaacctttctgtgataatgatcatgtgtataattacctttttgccctcatgtctatattgaacacaaggcatagaccgtgtcatcct 6094695  T
Q  511 tgtctagtttaatattgaacccatagacatttttgctgatatgtaagaagcgcaaattccatctaggtca 580  Q
    ||||||||| |||||||  ||| ||||||||| | ||| |||||| || | ||||||||||||| |||||    
T  6094694 tgtctagttcaatattgggcccgtagacatttctcctgttatgtaggaggggcaaattccatcttggtca 6094625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 413 - 580
Target Start/End: Complemental strand, 15326869 - 15326700
Alignment:
Q  413 atgtgatctaacaaaacatttctttgataatgat--tgtttatgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatcct 510  Q
    ||||||||| || |||||||||  |||||||| |  ||| ||| ||||||||||| |  | ||||||||||| ||||||||||||| ||| ||  |||||    
T  15326869 atgtgatctgacgaaacatttccgtgataatgttcatgtgtataattacccttttgccctcatgtctatattgaacacaaggcatagaccgtgccatcct 15326770  T
Q  511 tgtctagtttaatattgaacccatagacatttttgctgatatgtaagaagcgcaaattccatctaggtca 580  Q
    ||||||||| |||||||  ||| ||||||||| | ||| |||||| || | |||||||||||||||||||    
T  15326769 tgtctagttcaatattgggcccgtagacatttctcctgttatgtaggaggggcaaattccatctaggtca 15326700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 413 - 580
Target Start/End: Complemental strand, 15507238 - 15507069
Alignment:
Q  413 atgtgatctaacaaaacatttctttgataatgat--tgtttatgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatcct 510  Q
    ||||||||| || |||||||||  |||||||| |  ||| ||| ||||||||||| |  | ||||||||||| ||||||||||||| ||| ||  |||||    
T  15507238 atgtgatctgacgaaacatttccgtgataatgttcatgtgtataattacccttttgccctcatgtctatattgaacacaaggcatagaccgtgccatcct 15507139  T
Q  511 tgtctagtttaatattgaacccatagacatttttgctgatatgtaagaagcgcaaattccatctaggtca 580  Q
    ||||||||| |||||||  ||| ||||||||| | ||| |||||| || | |||||||||||||||||||    
T  15507138 tgtctagttcaatattgggcccgtagacatttctcctgttatgtaggaggggcaaattccatctaggtca 15507069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 39 - 228
Target Start/End: Original strand, 1012604 - 1012792
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    ||||| |||||| || | ||||||||||| ||||| ||||||||| ||||| ||| ||||||||| | ||| | ||||||||| ||||||||||| || |    
T  1012604 tttttgcattcgggacgagtttgggtatgggttcggggtgggtacctatatacccattacccgtcccatactcatgttttaaa-tcggggaaaacccaaa 1012702  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    | || |||||||| |||||||| |  |||||||||||||| |||| |||| | || |||| || |||| ||||||  |||| ||||||||    
T  1012703 ctcatacccaaactcaatcaaaacgaggaaaacccgtcaaattgggtttgattcgggtgggtaaccacgggtatggattttattgccatg 1012792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 77 - 178
Target Start/End: Complemental strand, 6388581 - 6388480
Alignment:
Q  77 tgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtc 176  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||||| || || ||||| |||||||| || ||||| | | |||| ||||||    
T  6388581 tgggtacctatatccccgttacccgtcttgtacccgtgttttaaaatcggggaagacccaaacccatacccaaactcagtcaaaacggagaaagcccgtc 6388482  T
Q  177 aa 178  Q
    ||    
T  6388481 aa 6388480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 77 - 224
Target Start/End: Complemental strand, 4230795 - 4230648
Alignment:
Q  77 tgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtc 176  Q
    ||||||| ||||| |||||||| |||| | |||| ||||||| | |||||||||||| |||||||| ||||||||||| |||||   |||||||||||||    
T  4230795 tgggtacctatatacccgttactcgtcccatacctgtgttttgagatcggggaaaacccatacccatacccaaacccagtcaaaatggggaaaacccgtc 4230696  T
Q  177 aacttggatttggtccgagtggctacccacaggtatgagttttgttgc 224  Q
    || |||| |||||| || | || || ||||| |||||  |||||||||    
T  4230695 aaattgggtttggttcgggcgggtaaccacatgtatggattttgttgc 4230648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 43 - 134
Target Start/End: Original strand, 5700345 - 5700436
Alignment:
Q  43 tacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaact 134  Q
    |||||||| ||||| |||||||||| ||||||||||||||  ||||||||||||||| ||||| |||| ||||||| |||||||| ||||||    
T  5700345 tacattcgggatggatttgggtatgggttcgaggtgggtatctatatccccgttaccagtctcatacctgtgttttgaaatcgggaaaaact 5700436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 52 - 190
Target Start/End: Original strand, 14155530 - 14155668
Alignment:
Q  52 gatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaac 151  Q
    ||||||||||||||||| || | ||||| ||  ||||||| |||||||| |||  |||||||||||| |||||||| ||||| || || || ||||||||    
T  14155530 gatgggtttgggtatgaatttggggtggataaatatatcctcgttacccatcttatacccgtgttttgaaatcgggaaaaacccaaactcatacccaaac 14155629  T
Q  152 ccaatcaaagcagggaaaacccgtcaacttggatttggt 190  Q
    ||| ||| | | ||||||||||||||| |||| ||||||    
T  14155630 ccagtcataccggggaaaacccgtcaaattgggtttggt 14155668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 57 - 183
Target Start/End: Original strand, 14687402 - 14687528
Alignment:
Q  57 gtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaat 156  Q
    ||||||||||| ||||| ||||| ||| |||||||| ||| | |||| | |||| ||||||| |||||||||||||| || | ||| |||||||||||||    
T  14687402 gtttgggtatgggttcggggtggatacatatatccctgtttctcgtcccatacctgtgttttgaaatcggggaaaacccaaatccatacccaaacccaat 14687501  T
Q  157 caaagcagggaaaacccgtcaacttgg 183  Q
    |||||  ||||||||||| ||| ||||    
T  14687502 caaagtggggaaaacccgccaaattgg 14687528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 413 - 580
Target Start/End: Complemental strand, 21941336 - 21941167
Alignment:
Q  413 atgtgatctaacaaaacatttctttgataatgat--tgtttatgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatcct 510  Q
    |||||||||  | |||| ||||| ||||||||||  ||| ||| ||||||||||| |  | ||||||||||| ||||||||||||| ||| ||| |||||    
T  21941336 atgtgatctgtcgaaacctttctgtgataatgatcatgtgtataattacccttttgccctcatgtctatattgaacacaaggcatagaccgtgtcatcct 21941237  T
Q  511 tgtctagtttaatattgaacccatagacatttttgctgatatgtaagaagcgcaaattccatctaggtca 580  Q
    ||||||||| |||||||  ||| ||||||||| |  || |||||| || | | |||||||||||||||||    
T  21941236 tgtctagttcaatattgggcccgtagacatttctcatgttatgtaggaggggaaaattccatctaggtca 21941167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 43 - 128
Target Start/End: Complemental strand, 9476112 - 9476027
Alignment:
Q  43 tacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcgggg 128  Q
    |||||||| |||||||||||||||| |||||||||||||| |||||||||||||||  ||| |||| |||| |||| |||||||||    
T  9476112 tacattcgggatgggtttgggtatgggttcgaggtgggtatttatatccccgttacttgtcccgtatccgttttttgaaatcgggg 9476027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 57 - 178
Target Start/End: Complemental strand, 27777283 - 27777162
Alignment:
Q  57 gtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaat 156  Q
    ||||||||||| ||||| ||||||||| | |||| | |||||| ||| |||||| ||||||| |||||||| |||||||| || || ||||||||||| |    
T  27777283 gtttgggtatgggttcggggtgggtacctgtatctctgttacctgtcccgtacctgtgttttgaaatcgggaaaaactcaaacacatacccaaacccagt 27777184  T
Q  157 caaagcagggaaaacccgtcaa 178  Q
    |||| | | |||||||||||||    
T  27777183 caaaacggagaaaacccgtcaa 27777162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 38 - 178
Target Start/End: Complemental strand, 15068691 - 15068552
Alignment:
Q  38 ctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcat 137  Q
    |||| |||||||| |  ||||| ||||||| ||||| ||||| ||| |||||||| |||||| ||| ||||||||| |||| |||||||||||||| |      
T  15068691 ctttctacattcgggtagggttcgggtatgggttcggggtggatacatatatccc-gttacctgtcccgtacccgtattttgaaatcggggaaaacccga 15068593  T
Q  138 acccaaacccaaacccaatcaaagcagggaaaacccgtcaa 178  Q
    ||||| ||||| ||||| ||||| | |||||||||||||||    
T  15068592 acccatacccagacccagtcaaatcggggaaaacccgtcaa 15068552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 55 - 228
Target Start/End: Original strand, 17469256 - 17469417
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 154  Q
    ||||||||||||| ||| | ||||||||| ||||| ||||||||||||| | |||||||||||| ||||||||||            |||||||||||||    
T  17469256 gggtttgggtatgggtttggggtgggtacctatatacccgttacccgtcccatacccgtgttttgaaatcgggga------------aaacccaaaccca 17469343  T
Q  155 atcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
     ||||| | ||||||| ||||||| |||| |||||| || |||| || | || |||||| ||||||||||||||    
T  17469344 gtcaaaacggggaaaatccgtcaaattgggtttggttcgggtgggtaactacgggtatgggttttgttgccatg 17469417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 39 - 230
Target Start/End: Complemental strand, 30481524 - 30481332
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||||| || | ||||||||||| ||||| ||||||||| ||||||| | |||| |||||| ||| ||| |||| ||||| || ||||| || |    
T  30481524 tttttacattcgggacgagtttgggtatgggttcggggtgggtacctatatcctcattactcgtctcatactcgtattttgaaatcaggaaaaacccaaa 30481425  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctaccca-caggtatgagttttgttgccatgtc 230  Q
    | || || |||||||||||||| ||||||||| || |||| || | |||||| || | |  ||||||  ||||| ||| ||||||||||||||    
T  30481424 ctcatactcaaacccaatcaaaacagggaaaatccatcaatttaggtttggttcgggcgattacccatgaggtaagagctttgttgccatgtc 30481332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 55 - 178
Target Start/End: Original strand, 10297459 - 10297582
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 154  Q
    |||||| |||||| ||||  ||| ||||| ||||||||||||||| ||| ||| ||||| |||| |||||||||||||| || |  || | |||||||||    
T  10297459 gggttttggtatgggttcagggtaggtacatatatccccgttacctgtcccgtccccgtattttgaaatcggggaaaacccaaattcacatccaaaccca 10297558  T
Q  155 atcaaagcagggaaaacccgtcaa 178  Q
    || ||| |||||||||||||||||    
T  10297559 ataaaatcagggaaaacccgtcaa 10297582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 55 - 178
Target Start/End: Complemental strand, 37961049 - 37960926
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 154  Q
    ||||||||||||||||||| |||| |||| ||||| || |||||| ||| | |||||||||||| |||||||||||||| || || || ||||||||| |    
T  37961049 gggtttgggtatgagttcggggtgtgtacctatatacctgttacctgtcccatacccgtgtttttaaatcggggaaaacccaaactcatacccaaaccta 37960950  T
Q  155 atcaaagcagggaaaacccgtcaa 178  Q
     ||||| | || ||||||| ||||    
T  37960949 gtcaaaacgggaaaaacccatcaa 37960926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 455 - 577
Target Start/End: Complemental strand, 28548674 - 28548552
Alignment:
Q  455 attaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatccttgtctagtttaatattgaacccatagacatttttgctgatatgt 554  Q
    ||||||||||| |  | ||||||||||| ||||||||||||| ||| ||| |||||||||||||| |||||||  ||| ||||||||| |  || |||||    
T  28548674 attacccttttgccctcatgtctatattgaacacaaggcatagaccgtgtcatccttgtctagttcaatattgggcccgtagacatttctcatgttatgt 28548575  T
Q  555 aagaagcgcaaattccatctagg 577  Q
    | || | ||||||||||||||||    
T  28548574 aggaggggcaaattccatctagg 28548552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 107 - 190
Target Start/End: Original strand, 17220765 - 17220848
Alignment:
Q  107 tacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 190  Q
    |||||||||||| |||||||||||||  |||||||| |||||||| || |||||   ||||||||||||||| |||||||||||    
T  17220765 tacccgtgttttgaaatcggggaaaatccatacccatacccaaactcagtcaaaatggggaaaacccgtcaaattggatttggt 17220848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 26 - 131
Target Start/End: Original strand, 30904020 - 30904123
Alignment:
Q  26 aataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcg 125  Q
    ||||||||||||  || |||||||| ||  | |||||||||| ||  | |||||||||||||||| || |||||||||||||||||||||||| ||||||    
T  30904020 aataaattgatt--ttctacattcgggactgatttgggtatgggtatggggtgggtacttatatctccattacccgtctcgtacccgtgttttgaaatcg 30904117  T
Q  126 gggaaa 131  Q
     |||||    
T  30904118 aggaaa 30904123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 43 - 145
Target Start/End: Complemental strand, 39379678 - 39379578
Alignment:
Q  43 tacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcataccca 142  Q
    |||||||| || | ||||| ||||||||||| ||||||||||| ||||| | ||||||||| |||||||||||||| | ||| |||||||| ||||||||    
T  39379678 tacattcgggacgagtttgagtatgagttcg-ggtgggtacttttatcctcattacccgtcccgtacccgtgttttgagatc-gggaaaacccataccca 39379581  T
Q  143 aac 145  Q
    |||    
T  39379580 aac 39379578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 57 - 178
Target Start/End: Original strand, 28345494 - 28345615
Alignment:
Q  57 gtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaat 156  Q
    ||||||||||| ||||| ||||||| | ||||||| |||||||| ||  |||||||||||||  ||||||| ||||  || ||| | ||| ||||||| |    
T  28345494 gtttgggtatgggttcggggtgggtgcctatatcctcgttacccatcctgtacccgtgttttggaatcgggtaaaatccaaacctataccgaaacccagt 28345593  T
Q  157 caaagcagggaaaacccgtcaa 178  Q
    |||||| || ||||||||||||    
T  28345594 caaagcgggaaaaacccgtcaa 28345615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 39 - 188
Target Start/End: Original strand, 34139433 - 34139580
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    ||||| |||||| || ||||||||||||| ||||| ||||||||| ||||| || |||||  |||   || ||||||||| |||||||||||||| || |    
T  34139433 tttttgcattcgggacgggtttgggtatg-gttcggggtgggtacctatatacctgttacatgtcctatatccgtgtttttaaatcggggaaaac-caaa 34139530  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttg 188  Q
    | || ||||||||||| ||||| |  |||||||||||||| |||| ||||    
T  34139531 cacatacccaaacccagtcaaaacgaggaaaacccgtcaaattgggtttg 34139580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 39 - 148
Target Start/End: Original strand, 34777051 - 34777160
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | ||||| |||||||||| ||||| ||||||||| || || || ||||| |||  | |||||||||||| | |||||| ||||| ||||    
T  34777051 tttttacatttgggatggatttgggtatgggttcggggtgggtacctaaatacctgttactcgttccatacccgtgttttgagatcgggaaaaacccata 34777150  T
Q  139 cccaaaccca 148  Q
    ||||||||||    
T  34777151 cccaaaccca 34777160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 228
Target Start/End: Complemental strand, 29416259 - 29416101
Alignment:
Q  69 gttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaa 168  Q
    ||||| ||||||||| ||||||| |||||||| ||   ||| ||||||||||| | | | |||| ||| || || |||||||| || ||||| | |||||    
T  29416259 gttcggggtgggtacatatatcctcgttacccatcctttactcgtgttttaaa-tagagaaaaagtcaaactcatacccaaactcagtcaaaacggggaa 29416161  T
Q  169 aacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    |||||||||| ||||||||||| || |||| |||||    |||||| |||||||||||||    
T  29416160 aacccgtcaaattggatttggttcgggtgggtacccgggagtatgaattttgttgccatg 29416101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 132
Target Start/End: Complemental strand, 2183710 - 2183616
Alignment:
Q  38 ctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaa 132  Q
    |||| |||||||| |  ||||||| ||||||||||| ||||||||| |||||| || |||||  |||||||||||| |||| ||||||| |||||    
T  2183710 ctttctacattcgggtagggtttgagtatgagttcggggtgggtacatatatctccattacctctctcgtacccgtattttgaaatcggagaaaa 2183616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 107 - 228
Target Start/End: Complemental strand, 2075869 - 2075748
Alignment:
Q  107 tacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccac 206  Q
    ||||| |||||| | |||||| ||||| |||||||| ||||||||||| ||||| | | ||||| ||||||| |||| |||||| |  | || || ||||    
T  2075869 tacccatgttttgagatcgggaaaaacccatacccatacccaaacccagtcaaaacggagaaaatccgtcaaattgggtttggttcaggcgggtaaccac 2075770  T
Q  207 aggtatgagttttgttgccatg 228  Q
     | |||||||||||||||||||    
T  2075769 ggatatgagttttgttgccatg 2075748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 45 - 178
Target Start/End: Original strand, 24568929 - 24569061
Alignment:
Q  45 cattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaa 144  Q
    |||||| || || |||| ||||| ||||| ||||| ||| ||||| |||| |||| ||| | ||||| |||| | |||||||| ||||  |||||||| |    
T  24568929 cattcgggacggatttgagtatgggttcggggtggatacctatatacccgctacctgtcccatacccatgttgtgaaatcgggaaaaatccatacccata 24569028  T
Q  145 cccaaacccaatcaaagcagggaaaacccgtcaa 178  Q
    || ||||||||||||| | |||||||||||||||    
T  24569029 cctaaacccaatcaaa-cggggaaaacccgtcaa 24569061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 39 - 142
Target Start/End: Complemental strand, 9642454 - 9642351
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || |||| || ||||| ||||| | ||| ||  |||| |||||||||||||| | |||||||||||| |||||||||||||| || |    
T  9642454 tttttacatttgggacgggtatgagtatgggttcgggatggatatatataaccccgttacccgtcccatacccgtgttttgaaatcggggaaaacccaaa 9642355  T
Q  139 ccca 142  Q
    ||||    
T  9642354 ccca 9642351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 92
Target Start/End: Original strand, 17108350 - 17108414
Alignment:
Q  26 aataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccc 92  Q
    ||||||||||||  ||||||| ||| |||| |||||||||| ||||||||||| |||||||||||||    
T  17108350 aataaattgatt--ttttacaatcgggatgagtttgggtataagttcgaggtgtgtacttatatccc 17108414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 63 - 178
Target Start/End: Complemental strand, 27056634 - 27056519
Alignment:
Q  63 gtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagc 162  Q
    ||||| ||||| ||||||||  |||| |||||||||||||| | |||| ||  ||| |||||||| ||||| || ||||| | |||||||||  ||||||    
T  27056634 gtatgggttcggggtgggtagatataaccccgttacccgtcccatacctgtactttgaaatcgggaaaaacccaaacccataaccaaacccagccaaagc 27056535  T
Q  163 agggaaaacccgtcaa 178  Q
      ||||||||||||||    
T  27056534 gaggaaaacccgtcaa 27056519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 189
Target Start/End: Original strand, 35215557 - 35215670
Alignment:
Q  75 ggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccg 174  Q
    ||||||||| ||||| | ||||||||||||| |||||||||||| ||||| |||||||| || |  || ||||||||||  ||||| | || |||||| |    
T  35215557 ggtgggtacctatatactcgttacccgtctcatacccgtgttttgaaatc-gggaaaacccaaaatcatacccaaacccggtcaaaacgggaaaaaccgg 35215655  T
Q  175 tcaacttggatttgg 189  Q
    |||| |||| |||||    
T  35215656 tcaaattgggtttgg 35215670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 57 - 133
Target Start/End: Complemental strand, 8545434 - 8545358
Alignment:
Q  57 gtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaac 133  Q
    ||||| ||||| ||||| ||||||||  |||||||||||||| |||  | |||||||||||| ||||||| ||||||    
T  8545434 gtttgagtatgggttcggggtgggtatctatatccccgttactcgttccatacccgtgttttgaaatcggagaaaac 8545358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 143
Target Start/End: Original strand, 14186321 - 14186409
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaa 143  Q
    ||||||||||||| ||||  |||| |||| |||||  ||||||||| || | |||||||||||| |||||| | |||||||| ||||||    
T  14186321 gggtttgggtatgggttcagggtgagtacctatatatccgttacccatcccatacccgtgttttgaaatcgagaaaaactcaaacccaa 14186409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 146
Target Start/End: Complemental strand, 11255111 - 11255005
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || |||| |||||||| |||||  |||||||| ||||| || |||| ||||| | |||||||||||  ||| | |||||||| ||||    
T  11255111 tttttacatttgggacgggtatgggtatgggttcgtagtgggtacctatatacctgttatccgtcccatacccgtgtttggaaagc-gggaaaacccata 11255013  T
Q  139 cccaaacc 146  Q
    ||||||||    
T  11255012 cccaaacc 11255005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 230
Target Start/End: Complemental strand, 33631897 - 33631823
Alignment:
Q  156 tcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatgtc 230  Q
    ||||||| || |||||||||||| || |||||||| || |||  ||||||| |||||| | ||||||||||||||    
T  33631897 tcaaagcgggaaaaacccgtcaatttagatttggttcgggtgcgtacccacgggtatgggctttgttgccatgtc 33631823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 143
Target Start/End: Complemental strand, 36132014 - 36131916
Alignment:
Q  45 cattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaa 143  Q
    |||||| || || |||| ||||||||||| ||||| ||| | ||| ||| |||||| || | ||| |||||||| |||| |||||||||||| ||||||    
T  36132014 cattcgggacggatttgtgtatgagttcggggtggatacctgtatgccctttacccatcccatactcgtgttttgaaataggggaaaactcaaacccaa 36131916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 118
Target Start/End: Complemental strand, 33631988 - 33631923
Alignment:
Q  53 atgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgtttt 118  Q
    |||||| |||||||| ||| | ||||||||||||||||||| |||| |||| | ||||| ||||||    
T  33631988 atgggtatgggtatgggtttggggtgggtacttatatccccattactcgtcccatacccatgtttt 33631923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 94; Significance: 2e-45; HSPs: 72)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 39 - 228
Target Start/End: Complemental strand, 44953538 - 44953349
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || ||||||| ||||||||||| |||| |||| ||||| ||||||||||||| | |||||||||||| | |||||||||||| ||||    
T  44953538 tttttacatttgggacgggtttgagtatgagttcggggtgagtacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccata 44953439  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    |||||||||||||||| ||||| | ||||||||||||||| |||| |||||| |||| || || |||| ||||||| |||||||||||||    
T  44953438 cccaaacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgagcgggtaaccacgggtatgaattttgttgccatg 44953349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 39 - 228
Target Start/End: Complemental strand, 39655376 - 39655187
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || ||||||||||||| ||| | ||||||||| ||||| || |||||||||| | |||||||||||| | |||||||||||| ||||    
T  39655376 tttttacatttgagacgggtttgggtatgggtttggggtgggtacctatatacctgttacccgtcccatacccgtgttttgagatcggggaaaacccata 39655277  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    |||| ||||||||||||||||| | ||||||||||||||| |||| |||||| || | || || |||| |||||| ||||||||||||||    
T  39655276 cccatacccaaacccaatcaaaacggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacgggtatgggttttgttgccatg 39655187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 39 - 228
Target Start/End: Original strand, 49580049 - 49580238
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || ||||||| ||||| ||||||||||||||| ||||| | ||||||||||| | |||||||||||| | |||||||||||| ||||    
T  49580049 tttttacatttgggacgggtttgagtatgggttcgaggtgggtacctatatactcgttacccgtcccatacccgtgttttgagatcggggaaaacccata 49580148  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    |||| ||||||||||| ||||| | ||||||||||||||| ||||||||||| || | || || |||| |||||| ||||||||| ||||    
T  49580149 cccatacccaaacccagtcaaaacggggaaaacccgtcaaattggatttggttcgggcggataaccacgggtatgggttttgttgtcatg 49580238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 39 - 228
Target Start/End: Complemental strand, 48390920 - 48390731
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    ||||||| |||| || |||| |||||||| ||||  | ||||||| ||||| ||||||||||||| | |||||||||||| |||||||||||||| ||||    
T  48390920 tttttacgttcgggacgggtatgggtatgggttcaggatgggtacctatattcccgttacccgtcccatacccgtgttttgaaatcggggaaaacccata 48390821  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    |||| ||||||||||| ||||| | ||||||| ||||||| ||||||||||| |||  || || || | |||||| ||||||||||||||    
T  48390820 cccatacccaaacccagtcaaaacggggaaaatccgtcaaattggatttggttcgaacgggtaaccgcgggtatgggttttgttgccatg 48390731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 40 - 228
Target Start/End: Complemental strand, 7469880 - 7469692
Alignment:
Q  40 ttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatac 139  Q
    ||||||||| | || ||||||| ||||| ||||| ||||||||| ||||| ||||||||||||| | |||||||||||  | ||| |||||||| |||||    
T  7469880 ttttacatttgggacgggtttgtgtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcagggaaaacccatac 7469781  T
Q  140 ccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    ||| ||||||||||| ||||| | ||||||||||||||| |||| |||||| || | || || |||| |||||| ||||||||||||||    
T  7469780 ccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacgggtatgggttttgttgccatg 7469692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 58 - 224
Target Start/End: Original strand, 34119660 - 34119826
Alignment:
Q  58 tttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatc 157  Q
    |||||||||| ||||| ||||||||| ||||| || |||| ||||||| ||||||||||||||||||||| |||||||| || || ||||||||||||||    
T  34119660 tttgggtatgggttcggggtgggtacctatatacctgttatccgtctcatacccgtgttttaaaatcgggaaaaactcaaactcatacccaaacccaatc 34119759  T
Q  158 aaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgc 224  Q
    |||   ||||||||||||||| || |||||||| || |||| || ||||| | ||| ||||||||||    
T  34119760 aaaatggggaaaacccgtcaaattagatttggttcgggtggttaaccacatggatgggttttgttgc 34119826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 55 - 228
Target Start/End: Original strand, 29284337 - 29284510
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 154  Q
    ||||||||||||| ||||| | ||||||| ||||| ||||||||||||| | |||||||||||  | |||||| ||||| |||||||| |||||||||||    
T  29284337 gggtttgggtatgggttcgggctgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcgggaaaaacccatacccatacccaaaccca 29284436  T
Q  155 atcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
     ||||| | | ||||||||||||| |||| |||||| || | || || |||| |||||||||||||||||||||    
T  29284437 gtcaaaacggagaaaacccgtcaaattgggtttggttcgggcgggtaaccacgggtatgagttttgttgccatg 29284510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 39 - 228
Target Start/End: Original strand, 39728656 - 39728845
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || ||||||||||||| ||||| ||||||||||||||| |||||||||| || | ||||||| |||| | |||| |||||||  |||    
T  39728656 tttttacatttgggacgggtttgggtatgggttcggggtgggtacttatatacccgttacccatcccatacccgtattttgagatcgaggaaaacctata 39728755  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    | || ||||||||||| ||||| | ||||||| ||||||| ||||||||||| ||   || || |||| |||||| ||||||||||||||    
T  39728756 ctcatacccaaacccagtcaaaacggggaaaatccgtcaaattggatttggttcggacgggtaaccacgggtatgggttttgttgccatg 39728845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 45 - 228
Target Start/End: Complemental strand, 4557402 - 4557219
Alignment:
Q  45 cattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaa 144  Q
    |||||| ||| | |||||||||| ||||| ||||||||| ||||| | ||||||||||| | ||||| |||||| ||| |||||||||| || ||||| |    
T  4557402 cattcgggatagatttgggtatgggttcggggtgggtacctatatactcgttacccgtcccatacccatgttttgaaaacggggaaaacccaaacccata 4557303  T
Q  145 cccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    |||||||||| ||||| | || |||||||||||| |||| ||| || || |||| || |||| |||||||||||||||| ||||    
T  4557302 cccaaacccagtcaaaacgggaaaaacccgtcaaattgggttttgttcgggtgggtaaccacgggtatgagttttgttgtcatg 4557219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 413 - 580
Target Start/End: Original strand, 15341755 - 15341924
Alignment:
Q  413 atgtgatctaacaaaacatttctttgataatgat--tgtttatgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatcct 510  Q
    ||||||||| || |||| ||||| ||||||||||  ||| ||| |||||||||||||  | ||||||||||| ||||||||||||| ||| ||| |||||    
T  15341755 atgtgatctgacgaaacctttctgtgataatgatcatgtgtataattaccctttttccctcatgtctatattgaacacaaggcatagaccgtgtcatcct 15341854  T
Q  511 tgtctagtttaatattgaacccatagacatttttgctgatatgtaagaagcgcaaattccatctaggtca 580  Q
    ||||||||| |||||||  ||| ||||||||| | ||| |||||| |||| | |||||||||||||||||    
T  15341855 tgtctagttcaatattgggcccgtagacatttctcctgttatgtaggaagggtaaattccatctaggtca 15341924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 39 - 160
Target Start/End: Original strand, 44172611 - 44172732
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || ||||||||||||| ||||| ||||||||||||||| ||||||||||||| | |||||||||||| | |||||||||||| ||||    
T  44172611 tttttacatttgggacgggtttgggtatgggttcggggtgggtacttatatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccata 44172710  T
Q  139 cccaaacccaaacccaatcaaa 160  Q
    |||| || |||||||| |||||    
T  44172711 cccatactcaaacccagtcaaa 44172732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 39 - 160
Target Start/End: Original strand, 44179311 - 44179432
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || ||||||||||||| ||||| ||||||||||||||| ||||||||||||| | |||||||||||| | |||||||||||| ||||    
T  44179311 tttttacatttgggacgggtttgggtatgggttcggggtgggtacttatatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccata 44179410  T
Q  139 cccaaacccaaacccaatcaaa 160  Q
    |||| || |||||||| |||||    
T  44179411 cccatactcaaacccagtcaaa 44179432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 413 - 580
Target Start/End: Original strand, 10572128 - 10572297
Alignment:
Q  413 atgtgatctaacaaaacatttctttgataatgat--tgtttatgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatcct 510  Q
    ||||||||| || |||| ||||| ||||||||||  ||| ||| ||||||||||| |  | ||||||||||| ||||||||||||| ||| ||| |||||    
T  10572128 atgtgatctgacgaaacctttctgtgataatgatcatgtgtataattacccttttgccctcatgtctatattgaacacaaggcatagaccgtgtcatcct 10572227  T
Q  511 tgtctagtttaatattgaacccatagacatttttgctgatatgtaagaagcgcaaattccatctaggtca 580  Q
    ||||||||| |||||||  ||| ||||||||| | ||| |||||| || | |||||||||||||||||||    
T  10572228 tgtctagttcaatattgggcccgtagacatttctcctgttatgtaggaggagcaaattccatctaggtca 10572297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 413 - 580
Target Start/End: Original strand, 10578892 - 10579061
Alignment:
Q  413 atgtgatctaacaaaacatttctttgataatgat--tgtttatgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatcct 510  Q
    ||||||||| || |||| ||||| ||||||||||  ||| ||| ||||||||||| |  | ||||||||||| ||||||||||||| ||| ||| |||||    
T  10578892 atgtgatctgacgaaacctttctgtgataatgatcatgtgtataattacccttttgccctcatgtctatattgaacacaaggcatagaccgtgtcatcct 10578991  T
Q  511 tgtctagtttaatattgaacccatagacatttttgctgatatgtaagaagcgcaaattccatctaggtca 580  Q
    ||||||||| |||||||  ||| ||||||||| | ||| |||||| || | |||||||||||||||||||    
T  10578992 tgtctagttcaatattgggcccgtagacatttctcctgttatgtaggaggggcaaattccatctaggtca 10579061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 413 - 580
Target Start/End: Complemental strand, 13249278 - 13249109
Alignment:
Q  413 atgtgatctaacaaaacatttctttgataatgat--tgtttatgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatcct 510  Q
    ||||||||| || |||  ||||| ||||||||||  ||| ||| |||||||||||||  | ||||||||||| ||||||||||||| ||| ||| |||||    
T  13249278 atgtgatctgacgaaatctttctgtgataatgatcatgtgtataattaccctttttccctcatgtctatattgaacacaaggcatagaccgtgtcatcct 13249179  T
Q  511 tgtctagtttaatattgaacccatagacatttttgctgatatgtaagaagcgcaaattccatctaggtca 580  Q
    ||||||||| |||||||  ||| ||||||||| | ||| |||||| || | |||||||||||||||||||    
T  13249178 tgtctagttcaatattgggcccgtagacatttctcctgttatgtaggaggggcaaattccatctaggtca 13249109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 413 - 580
Target Start/End: Complemental strand, 13517478 - 13517309
Alignment:
Q  413 atgtgatctaacaaaacatttctttgataatgat--tgtttatgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatcct 510  Q
    ||||||||| || |||| ||||| ||||||||||  ||| ||| ||||||||||| |  | ||||||||||| ||||||||||||| ||| ||| |||||    
T  13517478 atgtgatctgacgaaacctttctgtgataatgatcatgtgtataattacccttttgccctcatgtctatattgaacacaaggcatagaccgtgtcatcct 13517379  T
Q  511 tgtctagtttaatattgaacccatagacatttttgctgatatgtaagaagcgcaaattccatctaggtca 580  Q
    ||||||||| |||||||  ||| ||||||||| | ||| |||||| || | |||||||||||||||||||    
T  13517378 tgtctagttcaatattgggcccgtagacatttctcctgttatgtaggaggggcaaattccatctaggtca 13517309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 413 - 580
Target Start/End: Original strand, 16482019 - 16482188
Alignment:
Q  413 atgtgatctaacaaaacatttctttgataatgat--tgtttatgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatcct 510  Q
    ||||||||| || |||| ||||| ||||||||||  ||| ||| ||||||||||| |  | ||||||||||| ||||||||||||| ||| ||| |||||    
T  16482019 atgtgatctgacgaaacctttctgtgataatgatcatgtgtataattacccttttgccctcatgtctatattgaacacaaggcatagaccgtgtcatcct 16482118  T
Q  511 tgtctagtttaatattgaacccatagacatttttgctgatatgtaagaagcgcaaattccatctaggtca 580  Q
    ||||||||| |||||||  ||| ||||||||| | ||| |||||| || | |||||||||||||||||||    
T  16482119 tgtctagttcaatattgggcccgtagacatttctcctgttatgtaggaggggcaaattccatctaggtca 16482188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 39 - 228
Target Start/End: Original strand, 34025939 - 34026128
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || |||| |||||||||||||| |||||  || ||||| | ||||||||||| | |||| ||||||| |||||||||||||| ||||    
T  34025939 tttttacatttgggacgggtatgggtatgagttcggggtggaaacctatatactcgttacccgtcccatacctgtgttttgaaatcggggaaaacccata 34026038  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    |||| | ||||||||| ||||| | || |||| ||||||| |||| |||||| || | || || || | |||||| ||||||||||||||    
T  34026039 cccatatccaaacccagtcaaaacgggaaaaaaccgtcaaattggttttggttcgggagggtaaccgcgggtatgggttttgttgccatg 34026128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 55 - 228
Target Start/End: Original strand, 44639275 - 44639448
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 154  Q
    ||||||||||||| ||||| ||||||||| ||||| ||||||||||||| | |||||||||||| | ||  |||||||| |||||||| |||||||||||    
T  44639275 gggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgagatatgggaaaacccatacccatacccaaaccca 44639374  T
Q  155 atcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
     |||||   ||||||||| ||||| |||| ||| || ||   || || |||| | |||||||||||||||||||    
T  44639375 gtcaaaatggggaaaaccagtcaaattgggtttcgttcggacgggtaaccacggatatgagttttgttgccatg 44639448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 39 - 228
Target Start/End: Original strand, 52572594 - 52572783
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || ||| ||| |||||  |||| ||||||| | ||||| ||||||||||||| | |||||||||||| | |||| ||||||||||||    
T  52572594 tttttacatttgggacgggcttgagtatggattcggggtgggtccctatatacccgttacccgtcccatacccgtgttttgagatcgaggaaaactcata 52572693  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    |||| ||||||||||| |||||   ||||||||| ||||| |||  |||||| || | || || |||| |||||| ||||||||||||||    
T  52572694 cccatacccaaacccagtcaaaatggggaaaacctgtcaaattgagtttggttcgggcggataaccacgggtatgggttttgttgccatg 52572783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 55 - 228
Target Start/End: Original strand, 54317145 - 54317318
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 154  Q
    ||||||||| ||| ||||| ||||||||| ||||| |||||||||||||   |||  ||||||| ||||||||||||||||| || || || ||||||||    
T  54317145 gggtttgggaatgggttcggggtgggtacctatatacccgttacccgtcctatacttgtgttttgaaatcggggaaaactcaaacacatactcaaaccca 54317244  T
Q  155 atcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
     ||||| | ||||||||||||||| ||||||||||| || | || || |||| | ||||  |||||||||||||    
T  54317245 gtcaaaacggggaaaacccgtcaaattggatttggttcgggcgggtaaccacggatatggattttgttgccatg 54317318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 39 - 187
Target Start/End: Original strand, 23580812 - 23580960
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | |||  || |||||||| |||||  |||||||| ||||| |||||||||||| || ||| |||||||| |||| ||||||||||||||    
T  23580812 tttttacatttgggataagtgtgggtatgggttcggagtgggtacctatatacccgttacccgtttcatactcgtgttttgaaattggggaaaactcata 23580911  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggattt 187  Q
    |||| ||||||||||| ||||| | || |||||||||||| ||| ||||    
T  23580912 cccatacccaaacccagtcaaaacgggaaaaacccgtcaaattgaattt 23580960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 57 - 228
Target Start/End: Complemental strand, 4016129 - 4015958
Alignment:
Q  57 gtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaat 156  Q
    ||||||||||| |||||  |||||||| ||||| ||||||| ||||| | ||||| |||||| |||||||||||||| || ||||| ||||||||| | |    
T  4016129 gtttgggtatgggttcggagtgggtacctatatacccgttatccgtcccatacccatgttttgaaatcggggaaaacccaaacccatacccaaacctagt 4016030  T
Q  157 caaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    |||| | || |||||||||||| |||  ||| || || |||| || |||| |||||| ||||||||||||||    
T  4016029 caaaacgggaaaaacccgtcaaattgagtttcgttcgggtgggtaaccacgggtatgggttttgttgccatg 4015958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 55 - 178
Target Start/End: Original strand, 44252748 - 44252871
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 154  Q
    ||||||||||||| ||||| ||||||||| ||||| || ||||| |||| | |||||||||||  | |||||||||||| |||||||| |||||||||||    
T  44252748 gggtttgggtatgggttcggggtgggtacctatatacctgttacacgtcccatacccgtgtttcgagatcggggaaaacccatacccatacccaaaccca 44252847  T
Q  155 atcaaagcagggaaaacccgtcaa 178  Q
     ||||| | |||||||||||||||    
T  44252848 gtcaaaacggggaaaacccgtcaa 44252871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 55 - 178
Target Start/End: Original strand, 52198156 - 52198279
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 154  Q
    ||||||||||||| ||||| ||||||||| ||||| ||||||||||||| | |||| ||||||| | |||||| ||||| |||||||| |||||||||||    
T  52198156 gggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacctgtgttttgagatcgggaaaaacccatacccatacccaaaccca 52198255  T
Q  155 atcaaagcagggaaaacccgtcaa 178  Q
     ||||| |||  ||||||||||||    
T  52198256 gtcaaaacagaaaaaacccgtcaa 52198279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 413 - 580
Target Start/End: Complemental strand, 13211973 - 13211804
Alignment:
Q  413 atgtgatctaacaaaacatttctttgataatgat--tgtttatgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatcct 510  Q
    ||||||||| || |||  ||||| ||||||||||  ||| ||| ||||||||||| |  | ||||||||||| ||||||||||||| ||| ||| |||||    
T  13211973 atgtgatctgacgaaatctttctgtgataatgatcatgtgtataattacccttttgccctcatgtctatattgaacacaaggcatagaccgtgtcatcct 13211874  T
Q  511 tgtctagtttaatattgaacccatagacatttttgctgatatgtaagaagcgcaaattccatctaggtca 580  Q
    ||||||||| |||||||  ||| ||||||||| | ||| |||||| || | |||||||||||||||||||    
T  13211873 tgtctagttcaatattgggcccgtagacatttctcctgttatgtaggaggggcaaattccatctaggtca 13211804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 63 - 228
Target Start/End: Complemental strand, 22535920 - 22535755
Alignment:
Q  63 gtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagc 162  Q
    ||||| ||||| ||||||| | | ||| ||||||||||||| | || ||||||||| |||| |||||||||||||||||| ||||||||||| ||||| |    
T  22535920 gtatgggttcggggtgggtgcctgtatacccgttacccgtcccatatccgtgttttgaaattggggaaaactcatacccatacccaaacccagtcaaaac 22535821  T
Q  163 agggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
     |||||||||| |||| |||  |||||| || | || || || | |||||| ||||||||||||||    
T  22535820 ggggaaaacccatcaaattgagtttggttcgggcggataaccgcgggtatgggttttgttgccatg 22535755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 39 - 183
Target Start/End: Complemental strand, 10043385 - 10043241
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||| ||||| ||||||| |||||||| ||||| ||||||| | |||| |||||||||||||| | ||||| |||||| ||| | |||||||| || |    
T  10043385 tttttatattcgggatgggtatgggtatgggttcggggtgggtgcatataaccccgttacccgtcccatacccatgttttgaaaccagggaaaacccaaa 10043286  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttgg 183  Q
    |||| ||||||||||| ||||||  | ||||||||||||| ||||    
T  10043285 cccatacccaaacccagtcaaagtggagaaaacccgtcaaattgg 10043241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 75 - 190
Target Start/End: Original strand, 19111755 - 19111870
Alignment:
Q  75 ggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccg 174  Q
    ||||||||||||||| ||||||| || || |||||||||||||| |||||||| |||||||| || || |||||||||||||||||   || |||| |||    
T  19111755 ggtgggtacttatatacccgttatccatcccgtacccgtgttttgaaatcgggaaaaactcaaactcatacccaaacccaatcaaaaagggaaaaatccg 19111854  T
Q  175 tcaacttggatttggt 190  Q
    |||| |||||||||||    
T  19111855 tcaaattggatttggt 19111870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 39 - 190
Target Start/End: Original strand, 29842293 - 29842443
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || |||| || ||||| ||||| ||||||||| ||||| ||||||||| ||| | |||||||||||||||||| |||||||| ||||    
T  29842293 tttttacatttgagacgggtatgagtatgggttcggggtgggtacctatattcccgttaccagtcccatacccgtgttttaaaatc-gggaaaacccata 29842391  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 190  Q
    || | ||||||||||||||  | || | |||||||||||| || ||||||||    
T  29842392 cctatacccaaacccaatccgaacatgaaaaacccgtcaaattagatttggt 29842443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 39 - 178
Target Start/End: Original strand, 34154399 - 34154538
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || |||| |||||||| ||||| ||||||||| ||||| |  ||||||||| || ||||| |||||| |||||||||||||| ||||    
T  34154399 tttttacatttgggacgggtatgggtatgggttcggggtgggtacctatattcttgttacccgtttcatacccatgttttgaaatcggggaaaacacata 34154498  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaa 178  Q
    |||| | ||||||||| ||||| | ||||||| |||||||    
T  34154499 cccatatccaaacccagtcaaaacggggaaaatccgtcaa 34154538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 55 - 230
Target Start/End: Complemental strand, 48305728 - 48305553
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 154  Q
    ||||||||||||  ||||| ||||||||| ||||| |||| ||| |||  | |||||||||||| |||| |||||||||||||||||| | |||||||||    
T  48305728 gggtttgggtataggttcggggtgggtacctatatacccgatactcgttccatacccgtgttttgaaattggggaaaactcatacccataaccaaaccca 48305629  T
Q  155 atcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatgtc 230  Q
     |||||   ||||||||||||||  |||| |||||| || |||| || || | ||||||  |||||||| ||||||    
T  48305628 gtcaaaatggggaaaacccgtcagattgggtttggttcgggtgggtaaccgcgggtatggattttgttgtcatgtc 48305553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 57 - 228
Target Start/End: Original strand, 53631907 - 53632078
Alignment:
Q  57 gtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaat 156  Q
    ||||| ||||| ||||| ||||||||| ||||| ||||||||||||||| ||| |||||||||||||  ||||||||||| ||||| ||| | ||||| |    
T  53631907 gtttgagtatgggttcggggtgggtacctatatacccgttacccgtctcatacacgtgttttaaaatttgggaaaactcaaacccatacctatacccatt 53632006  T
Q  157 caaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    |||| |  |||||||||||||| ||   |||||| |||  |  || |||| |||||||||||| ||||||||    
T  53632007 caaaacgaggaaaacccgtcaaattaagtttggttcgaacgagtaaccacgggtatgagttttattgccatg 53632078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 413 - 580
Target Start/End: Original strand, 15357122 - 15357291
Alignment:
Q  413 atgtgatctaacaaaacatttctttgataatgat--tgtttatgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatcct 510  Q
    ||||||||| || |||| ||| | ||||||||||  ||| ||| ||||||||||| |  | ||||||||||| ||||||||||||| ||| ||| |||||    
T  15357122 atgtgatctgacgaaacctttatgtgataatgatcatgtgtataattacccttttgccctcatgtctatattgaacacaaggcataaaccgtgtcatcct 15357221  T
Q  511 tgtctagtttaatattgaacccatagacatttttgctgatatgtaagaagcgcaaattccatctaggtca 580  Q
    ||||||||| |||||||  ||| ||||||||| | ||| |||||| || | | |||||||||||||||||    
T  15357222 tgtctagttcaatattgggcccgtagacatttctcctgttatgtaggaggggtaaattccatctaggtca 15357291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 413 - 580
Target Start/End: Original strand, 15600420 - 15600589
Alignment:
Q  413 atgtgatctaacaaaacatttctttgataatgat--tgtttatgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatcct 510  Q
    ||||||||| || |||| ||||| ||||| ||||  ||| ||| ||||||||||| |  | ||||||||||| |||| |||||||| ||| ||| |||||    
T  15600420 atgtgatctgacgaaacctttctgtgatagtgatcatgtgtataattacccttttgccctcatgtctatattgaacataaggcatagaccgtgtcatcct 15600519  T
Q  511 tgtctagtttaatattgaacccatagacatttttgctgatatgtaagaagcgcaaattccatctaggtca 580  Q
    ||||||||| |||||||  ||| ||||||||| | ||| |||||| || | |||||||||||||||||||    
T  15600520 tgtctagttcaatattgggcccgtagacatttctcctgttatgtaggaggggcaaattccatctaggtca 15600589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 413 - 580
Target Start/End: Original strand, 15606965 - 15607134
Alignment:
Q  413 atgtgatctaacaaaacatttctttgataatgat--tgtttatgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatcct 510  Q
    ||||||||| || |||| ||||| ||||| ||||  ||| ||| ||||||||||| |  | ||||||||||| |||| |||||||| ||| ||| |||||    
T  15606965 atgtgatctgacgaaacctttctgtgatagtgatcatgtgtataattacccttttgccctcatgtctatattgaacataaggcatagaccgtgtcatcct 15607064  T
Q  511 tgtctagtttaatattgaacccatagacatttttgctgatatgtaagaagcgcaaattccatctaggtca 580  Q
    ||||||||| |||||||  ||| ||||||||| | ||| |||||| || | |||||||||||||||||||    
T  15607065 tgtctagttcaatattgggcccgtagacatttctcctgttatgtaggaggggcaaattccatctaggtca 15607134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 413 - 576
Target Start/End: Complemental strand, 18520646 - 18520481
Alignment:
Q  413 atgtgatctaacaaaacatttctttgataatgat--tgtttatgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatcct 510  Q
    ||||||||| || |||| ||||| ||||||||||  ||| ||| |||| |||||| |  | ||||||||||||||||||||||||| ||| ||| |||||    
T  18520646 atgtgatctgacgaaacctttctgtgataatgatcatgtgtataattatccttttgccctcatgtctatattaaacacaaggcatagaccgtgtcatcct 18520547  T
Q  511 tgtctagtttaatattgaacccatagacatttttgctgatatgtaagaagcgcaaattccatctag 576  Q
    ||| ||||| |||||||  ||| ||||||||| | ||| |||||| || | |||||||||||||||    
T  18520546 tgtgtagttcaatattgggcccgtagacatttctcctgttatgtaggaggggcaaattccatctag 18520481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 39 - 228
Target Start/End: Complemental strand, 23547045 - 23546862
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || | ||||||||||| ||||| ||||||||| ||||| ||||||||||||| | |||||||||||  | |||||||||||| ||||    
T  23547045 tttttacatttgggacgagtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaacccata 23546946  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    ||||||      |||| ||||| | |||||||||||| || |||| |||||| |  | || || |||| |||||| ||||||||||||||    
T  23546945 cccaaa------cccagtcaaaacggggaaaacccgttaaattgggtttggttcatgcgggtaaccacgggtatgggttttgttgccatg 23546862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 52 - 190
Target Start/End: Original strand, 42243385 - 42243523
Alignment:
Q  52 gatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaac 151  Q
    ||||||||||||||||| || | ||||| ||  ||||||| |||||||| |||| ||||||||| || |||||||| ||||| || || || ||||||||    
T  42243385 gatgggtttgggtatgaatttggggtggataaatatatcctcgttacccatctcatacccgtgtattgaaatcgggaaaaacccaaactcatacccaaac 42243484  T
Q  152 ccaatcaaagcagggaaaacccgtcaacttggatttggt 190  Q
    ||| ||||| | ||||||||||||||| |||| ||||||    
T  42243485 ccagtcaaaccggggaaaacccgtcaaattgggtttggt 42243523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 426 - 580
Target Start/End: Complemental strand, 8491153 - 8490997
Alignment:
Q  426 aaacatttctttgataatgat--tgtttatgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatccttgtctagtttaat 523  Q
    |||| ||||| ||||||||||  ||| ||| |||| |||||| |  | ||||||||||| ||||||||||||| ||| ||| |||||||||||||| |||    
T  8491153 aaacctttctgtgataatgatcatgtgtataattatccttttgccctcatgtctatattgaacacaaggcatagaccgtgtcatccttgtctagttcaat 8491054  T
Q  524 attgaacccatagacatttttgctgatatgtaagaagcgcaaattccatctaggtca 580  Q
    ||||  ||| ||||||||| | ||| |||||| || | |||||||||||||||||||    
T  8491053 attgggcccgtagacatttctcctgttatgtaggaggggcaaattccatctaggtca 8490997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 75 - 190
Target Start/End: Original strand, 43582598 - 43582713
Alignment:
Q  75 ggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccg 174  Q
    ||||||||| || || | ||||||||||||| |||||||||||| |||||||||||||||||||| || || |||||||| | ||| | | ||||||||     
T  43582598 ggtgggtacctacatacacgttacccgtctcatacccgtgttttgaaatcggggaaaactcatacacatactcaaacccagtaaaaacggagaaaaccca 43582697  T
Q  175 tcaacttggatttggt 190  Q
    |||| |||||||||||    
T  43582698 tcaaattggatttggt 43582713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 231 - 361
Target Start/End: Complemental strand, 54385366 - 54385236
Alignment:
Q  231 gagatactgatagagtgagtgagca-ctcatttgtggatggactaacgtaaaatctgttcatattatttgatcaatggttttaagttaatgggtccaagt 329  Q
    |||||||||  |||||||| ||||| ||||| ||  |||||||||   |||||||| | ||| |||||||||||||||| | |||||||| |||||||||    
T  54385366 gagatactggaagagtgagagagcaactcatgtgcagatggactactataaaatctatacatcttatttgatcaatggtct-aagttaattggtccaagt 54385268  T
Q  330 tggaccaatttttcagtgggtccaaattaaac 361  Q
    |||| |||||||||| ||||||||||||||||    
T  54385267 tggatcaatttttcaatgggtccaaattaaac 54385236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 413 - 580
Target Start/End: Complemental strand, 6110735 - 6110566
Alignment:
Q  413 atgtgatctaacaaaacatttctttgataatgat--tgtttatgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatcct 510  Q
    ||||||||| || |||| ||||| ||||||||||  ||| ||| ||||||||||| |    ||||||||||| ||||||||||||| ||| ||| |||||    
T  6110735 atgtgatctgacgaaacctttctgtgataatgatcatgtgtataattacccttttgcccccatgtctatattgaacacaaggcatagaccgtgtcatcct 6110636  T
Q  511 tgtctagtttaatattgaacccatagacatttttgctgatatgtaagaagcgcaaattccatctaggtca 580  Q
    ||||||||| |||||||  ||| ||||||||| | ||| |||||| || |   |||||||||||||||||    
T  6110635 tgtctagttcaatattgggcccgtagacatttctcctgttatgtaggagggaaaaattccatctaggtca 6110566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 55 - 228
Target Start/End: Original strand, 42758375 - 42758548
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 154  Q
    ||||||||||||| ||||| ||||  ||| ||||| || |||||||||| | |||| ||||||| ||||||||| |||| || || || |||||||||||    
T  42758375 gggtttgggtatgggttcggggtgcatacctatatacctgttacccgtcccatacctgtgttttgaaatcgggggaaacccaaactcatacccaaaccca 42758474  T
Q  155 atcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
     | ||| | ||||||| ||||||| |||| |||||  || | || || |||| |||||| ||||||||||||||    
T  42758475 gttaaaacggggaaaatccgtcaaattgggtttggatcgggcgggtaaccacgggtatgggttttgttgccatg 42758548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 88 - 172
Target Start/End: Complemental strand, 3414591 - 3414507
Alignment:
Q  88 atccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacc 172  Q
    |||||||||||| ||| ||||| ||||||| ||||||||| |||||||| ||||| | ||||||||||||||||| |||||||||    
T  3414591 atccccgttacctgtcccgtactcgtgtttgaaaatcgggaaaaactcaaacccataaccaaacccaatcaaagcggggaaaacc 3414507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 413 - 580
Target Start/End: Original strand, 17780654 - 17780823
Alignment:
Q  413 atgtgatctaacaaaacatttctttgataatgat--tgtttatgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatcct 510  Q
    ||||||||| || |||| ||| | ||||||||||  | | ||| ||||||||||| |  | ||||||||||| ||||||||||||| ||  ||| |||||    
T  17780654 atgtgatctgacgaaacctttatgtgataatgatcatatgtataattacccttttgccctcatgtctatattgaacacaaggcatagactgtgtcatcct 17780753  T
Q  511 tgtctagtttaatattgaacccatagacatttttgctgatatgtaagaagcgcaaattccatctaggtca 580  Q
    ||||||||| |||||||  ||| ||||||||| | ||| |||||| ||   |||||||||||||||||||    
T  17780754 tgtctagttcaatattgggcccgtagacatttctcctgttatgtaggagaggcaaattccatctaggtca 17780823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 107 - 228
Target Start/End: Complemental strand, 6738440 - 6738319
Alignment:
Q  107 tacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccac 206  Q
    |||||||||||| |||||||||||||| |||||||| ||||||||||| ||||| | || |||||| ||||| |||| |||||| || | || || || |    
T  6738440 tacccgtgttttgaaatcggggaaaacccatacccatacccaaacccagtcaaaacgggaaaaacctgtcaaattgggtttggttcgggcgggtaaccgc 6738341  T
Q  207 aggtatgagttttgttgccatg 228  Q
     |||||| ||||| ||||||||    
T  6738340 gggtatgggttttattgccatg 6738319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 414 - 580
Target Start/End: Complemental strand, 17137023 - 17136855
Alignment:
Q  414 tgtgatctaacaaaacatttctttgataatgat--tgtttatgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatcctt 511  Q
    |||||||| || |||| ||||| ||||||||||  ||| ||| |||||||||||||  |  |||||||||||||||||||||||| ||| ||| ||||||    
T  17137023 tgtgatctgacgaaacctttctgtgataatgatcatgtgtataattaccctttttccctcctgtctatattaaacacaaggcatagaccgtgtcatcctt 17136924  T
Q  512 gtctagtttaatattgaacccatagacatttttgctgatatgtaagaagcgcaaattccatctaggtca 580  Q
    |||| ||| |||||||   || |||||||||   | | |||||| || | | |||||||||||||||||    
T  17136923 gtcttgttcaatattgggtccgtagacatttccccggttatgtaggaggggaaaattccatctaggtca 17136855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 479 - 580
Target Start/End: Original strand, 32056503 - 32056604
Alignment:
Q  479 tattaaacacaaggcatacaccatgtgatccttgtctagtttaatattgaacccatagacatttttgctgatatgtaagaagcgcaaattccatctaggt 578  Q
    |||| ||||||||||||| ||| ||| |||||||||||||| |||||||  ||| ||||||||| | ||| |||||| || | |||||||||||||||||    
T  32056503 tattgaacacaaggcatagaccgtgtcatccttgtctagttcaatattgggcccgtagacatttctcctgttatgtaggaggggcaaattccatctaggt 32056602  T
Q  579 ca 580  Q
    ||    
T  32056603 ca 32056604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 26 - 173
Target Start/End: Original strand, 4553164 - 4553309
Alignment:
Q  26 aataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcg 125  Q
    ||||||||||||  ||||||||||| || ||||||| ||||| ||||| |||| ||| |||||||||  ||||||||  || |||| |||||| ||||||    
T  4553164 aataaattgatt--ttttacattcgagacgggtttgagtatgggttcggggtgtgtatttatatccctattacccgttccgcacccatgttttgaaatcg 4553261  T
Q  126 gggaaaactcatacccaaacccaaacccaatcaaagcagggaaaaccc 173  Q
    || |||||||| || || ||| || |||| ||||||| | ||||||||    
T  4553262 ggaaaaactcaaacgcatacctaagcccagtcaaagcggagaaaaccc 4553309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 132 - 228
Target Start/End: Complemental strand, 10371283 - 10371187
Alignment:
Q  132 actcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    ||||||||||||||||||||||| ||||| | ||||||||||||||| |||| |||||| |||| || || |||| ||| || ||||||||| ||||    
T  10371283 actcatacccaaacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgagcgggtaaccacgggtctgggttttgttgtcatg 10371187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 55 - 190
Target Start/End: Complemental strand, 3385943 - 3385808
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 154  Q
    |||||| ||||||  |||| ||||| ||| ||||||| ||||||| ||| |||||||||||||| |||| ||  |||| ||| | ||| ||| |||||||    
T  3385943 gggttttggtatggattcgtggtggctacctatatcctcgttacctgtcccgtacccgtgttttgaaatgggtaaaaattcaaatccatacctaaaccca 3385844  T
Q  155 atcaaagcagggaaaacccgtcaacttggatttggt 190  Q
     ||||||| ||||||||||||| | |||| ||||||    
T  3385843 gtcaaagcggggaaaacccgtcgaattgggtttggt 3385808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 107 - 190
Target Start/End: Original strand, 20087050 - 20087133
Alignment:
Q  107 tacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 190  Q
    |||||||||||| |||||||||||||| |||||||| | ||||||||| ||||| | | ||||| ||||||| |||||||||||    
T  20087050 tacccgtgttttgaaatcggggaaaacccatacccatatccaaacccagtcaaaacggagaaaatccgtcaaattggatttggt 20087133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 178
Target Start/End: Complemental strand, 1772504 - 1772363
Alignment:
Q  37 tctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactca 136  Q
    ||||| |||||||| |  ||||||| ||||||||||| ||||||||| ||||||| | |||| || |  |||||||| |||||||||||  |||||| ||    
T  1772504 tctttctacattcgggtagggtttgtgtatgagttcggggtgggtacatatatccgcattactcgccctgtacccgtattttaaaatcgaagaaaaccca 1772405  T
Q  137 tacccaaacccaaacccaatcaaagcagggaaaacccgtcaa 178  Q
     | ||| ||||| ||||| ||||| | ||||||| |||||||    
T  1772404 aaaccatacccagacccagtcaaatcggggaaaatccgtcaa 1772363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 455 - 580
Target Start/End: Complemental strand, 18523289 - 18523165
Alignment:
Q  455 attaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatccttgtctagtttaatattgaacccatagacatttttgctgatatgt 554  Q
    ||||||||||| |  | ||||||||||||||||||||||||| ||| ||| |||||||||||||| | |||||   || ||||||||| | ||| |||||    
T  18523289 attacccttttgccctgatgtctatattaaacacaaggcatagaccgtgtcatccttgtctagttcactattg-ggccgtagacatttctcctgttatgt 18523191  T
Q  555 aagaagcgcaaattccatctaggtca 580  Q
    | || |  ||||||||||||||||||    
T  18523190 aggagggacaaattccatctaggtca 18523165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 124
Target Start/End: Complemental strand, 30904914 - 30904834
Alignment:
Q  43 tacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatc 124  Q
    |||||||| || || |||||||||| ||||| ||||||||| |||||||||| |||||||| |||||||||||||| |||||    
T  30904914 tacattcgagacggatttgggtatgggttcggggtgggtacctatatccccg-tacccgtcccgtacccgtgttttgaaatc 30904834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 132
Target Start/End: Original strand, 34593119 - 34593208
Alignment:
Q  43 tacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaa 132  Q
    ||||||| ||| || |||||||||||||||| | |||||||| |||| | ||||||| |||| |||||| ||||||||||||| ||||||    
T  34593119 tacattcatgacggatttgggtatgagttcgggatgggtactgatattctcgttacctgtcttgtacccatgttttaaaatcgaggaaaa 34593208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 39 - 172
Target Start/End: Complemental strand, 44106895 - 44106763
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || ||||||| ||||| ||||| ||| | ||| |||||  ||||||| |||| | |||||||||||||| || ||||||||| ||||    
T  44106895 tttttacatttgggacgggtttgagtatgggttcggggtagatacctatatatccgttacgcgtcccatacccgtgttttaagattggggaaaac-cata 44106797  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacc 172  Q
    | || ||||||||||| ||||| | |||||||||    
T  44106796 ctcatacccaaacccagtcaaaacggggaaaacc 44106763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 413 - 542
Target Start/End: Original strand, 1647057 - 1647188
Alignment:
Q  413 atgtgatctaacaaaacatttctttgataatgat--tgtttatgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatcct 510  Q
    ||||||||| || |||| ||||| ||||||||||  ||| ||| ||||| ||||| |  | ||||||||||| ||||||||||||| ||| ||| |||||    
T  1647057 atgtgatctgacgaaacctttctgtgataatgatcatgtgtataattactcttttgccctcatgtctatattgaacacaaggcatagaccgtgtcatcct 1647156  T
Q  511 tgtctagtttaatattgaacccatagacattt 542  Q
    ||||||||| || ||||  ||| |||||||||    
T  1647157 tgtctagttcaaaattgggcccgtagacattt 1647188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 39 - 183
Target Start/End: Complemental strand, 23154167 - 23154024
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | ||| ||| || ||||| |||||  |||||||| ||||| | ||||||||||  | ||||||||||| ||| ||||||||||| ||||    
T  23154167 tttttacatttgggataggtatgagtatgggttcggagtgggtacctatatactcgttacccgttccatacccgtgtttgaaa-tcggggaaaacccata 23154069  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttgg 183  Q
    |||| |||||||| || | ||| | || |||||||||||| ||||    
T  23154068 cccatacccaaactcagttaaaacgggaaaaacccgtcaaattgg 23154024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 85 - 149
Target Start/End: Complemental strand, 41937070 - 41937006
Alignment:
Q  85 tatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaa 149  Q
    ||||| ||||||| ||||||| ||| ||||||||||||||||||||||| ||||| |||||||||    
T  41937070 tatatacccgttatccgtctcatactcgtgttttaaaatcggggaaaacccatactcaaacccaa 41937006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 267 - 361
Target Start/End: Complemental strand, 38701161 - 38701069
Alignment:
Q  267 atggactaacgtaaaatctgttcatattatttgatcaatggttttaagttaatgggtccaagttggaccaatttttcagtgggtccaaattaaac 361  Q
    |||||||| | |||||||| | |||  ||||||||||||||||| |||||||| ||| |||||| ||||||||||||| | ||||||||||||||    
T  38701161 atggactaccataaaatctatacatcctatttgatcaatggttt-aagttaattggttcaagttagaccaatttttcaat-ggtccaaattaaac 38701069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 79 - 160
Target Start/End: Complemental strand, 35687554 - 35687473
Alignment:
Q  79 ggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaa 160  Q
    ||||| |||||| | |||||||||||||||||||| || | ||||||||||||||||| || || || |||||||| |||||    
T  35687554 ggtacatatatcacagttacccgtctcgtacccgtattatgaaatcggggaaaactcaaactcatactcaaacccagtcaaa 35687473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 85 - 160
Target Start/End: Original strand, 2490336 - 2490411
Alignment:
Q  85 tatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaa 160  Q
    ||||||||| ||||||||   |||||||| |||| ||||||||||||||||| ||||| | ||||||||| |||||    
T  2490336 tatatccccattacccgttctgtacccgtattttgaaatcggggaaaactcaaacccatatccaaacccagtcaaa 2490411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 49025666 - 49025768
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || ||||||||||||| ||||| | || |||| ||||| || |||||||||| | |||||||||||| | |||||||||||| || |    
T  49025666 tttttacatttgggacgggtttgggtatgggttcg-gatgtgtacctatatacctgttacccgtcccatacccgtgttttgagatcggggaaaacccaaa 49025764  T
Q  139 ccca 142  Q
    ||||    
T  49025765 ccca 49025768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 146
Target Start/End: Complemental strand, 10823796 - 10823692
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | ||  |||||||||||| ||||| ||   |||||||||| ||||||| |  |||| |||||||||||| | ||||| |||||| ||||    
T  10823796 tttttacatttgggagaggtttgggtatgggttcgggg---gtacttatatacccgttatcaatctcatacccgtgttttgagatcggagaaaacccata 10823700  T
Q  139 cccaaacc 146  Q
    ||||||||    
T  10823699 cccaaacc 10823692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 187
Target Start/End: Original strand, 27252570 - 27252697
Alignment:
Q  57 gtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaat 156  Q
    ||||||||||| |||| |  ||||||| |||||| | |||| ||||| ||||||| ||||| ||| | || ||||||||| || || |||||||||||||    
T  27252570 gtttgggtatgggttcaa--tgggtacctatatcactgttatccgtcccgtacccatgtttgaaatt-ggagaaaactcaaactcatacccaaacccaat 27252666  T
Q  157 caaagcagggaaaacccgtcaacttggattt 187  Q
    |||| | |  |||||||||||| || |||||    
T  27252667 caaatccgataaaacccgtcaaattagattt 27252697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 143
Target Start/End: Original strand, 27937740 - 27937827
Alignment:
Q  56 ggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaa 143  Q
    |||||||||||||||||| |||| |||| | |||||| |||||| |||   ||| | ||||||||||||  |||||||||| ||||||    
T  27937740 ggtttgggtatgagttcgtggtgtgtacctctatccctgttacctgtcctatacacatgttttaaaatcaaggaaaactcaaacccaa 27937827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 142
Target Start/End: Complemental strand, 30616368 - 30616281
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcataccca 142  Q
    |||| |||||||| ||||| ||||| ||  |||| || ||||||||||| | || ||||||||| |||||||||||||| || |||||    
T  30616368 gggtatgggtatgggttcggggtggttatatataacctcgttacccgtcccatatccgtgttttgaaatcggggaaaacccaaaccca 30616281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 148
Target Start/End: Original strand, 831013 - 831102
Alignment:
Q  58 tttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaaccca 148  Q
    |||||||||| ||||  |||||||||  |||| | ||||| ||||||| |||||||||||| ||| |||| || || ||||||||||||||    
T  831013 tttgggtatgggttcagggtgggtacc-atatactcgttatccgtctcatacccgtgttttgaaaacgggaaatacccatacccaaaccca 831102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 126
Target Start/End: Complemental strand, 40796223 - 40796153
Alignment:
Q  56 ggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcgg 126  Q
    ||||||||||||| || | ||||||||| | ||||| | ||||||||| ||||||||| |||| |||||||    
T  40796223 ggtttgggtatgactttggggtgggtacatgtatcctcattacccgtcccgtacccgtattttgaaatcgg 40796153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 100
Target Start/End: Complemental strand, 31271344 - 31271299
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttaccc 100  Q
    ||||||| ||||||||||| ||||||||| |||||||| |||||||    
T  31271344 gggtttgagtatgagttcggggtgggtacctatatcccagttaccc 31271299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 92; Significance: 3e-44; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 39 - 230
Target Start/End: Complemental strand, 24414235 - 24414044
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || ||||||||||||| ||||| ||||||||| ||||| || |||||||||| | |||||||||||| | ||||||||||||  |||    
T  24414235 tttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacctgttacccgtcccatacccgtgttttgagatcggggaaaaccgata 24414136  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatgtc 230  Q
    |||| ||||||||||||||||| | ||||||||||||||| |||| |||||| || | || || ||||||||||| ||||||||||||||||    
T  24414135 cccatacccaaacccaatcaaaacggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacaggtatgggttttgttgccatgtc 24414044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 55 - 228
Target Start/End: Original strand, 30846948 - 30847121
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 154  Q
    ||||||||||||| ||||| ||||||||| ||||| ||||||||||||| | |||||||||||  | |||||||||||| |||||||| |||||||||||    
T  30846948 gggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaacccatacccatacccaaaccca 30847047  T
Q  155 atcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
     ||||| | ||||||||||||||| |||| |||||| || | || || |||| |||||| ||||||||||||||    
T  30847048 gtcaaaacggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacgggtatgggttttgttgccatg 30847121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 38 - 160
Target Start/End: Complemental strand, 38342623 - 38342501
Alignment:
Q  38 ctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcat 137  Q
    |||| |||||||| |  ||||||||||||| ||||| ||||||||| ||||||||||||||||||| |||| |||| ||||||||||||||||||||||     
T  38342623 ctttctacattcgggtagggtttgggtatgggttcggggtgggtacatatatccccgttacccgtcccgtatccgtattttaaaatcggggaaaactcaa 38342524  T
Q  138 acccaaacccaaacccaatcaaa 160  Q
    ||||| | |||||||||||||||    
T  38342523 acccatatccaaacccaatcaaa 38342501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 39 - 148
Target Start/End: Original strand, 37999469 - 37999578
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || ||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||| | |||||||||||| ||||    
T  37999469 tttttacatttgggacgggtttgggtatgagttcggggtgggtacttatatacccgttacccgtctcatacccgtgttttgagatcggggaaaacccata 37999568  T
Q  139 cccaaaccca 148  Q
    |||| |||||    
T  37999569 cccataccca 37999578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 61 - 228
Target Start/End: Original strand, 37106700 - 37106867
Alignment:
Q  61 gggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaa 160  Q
    ||||||| |||||  |||||||| ||||| ||||||||||||| | |||||||||||| |||||||||||||| |||||||| |||||||| || |||||    
T  37106700 gggtatgggttcggagtgggtacctatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaacccatacccatacccaaactcagtcaaa 37106799  T
Q  161 gcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
     | ||||||||||||||| |||| |||||| || | || || || |  ||||||||||||||| ||||    
T  37106800 acggggaaaacccgtcaaattgggtttggttcgggcgggtaaccgcgagtatgagttttgttgtcatg 37106867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 39 - 190
Target Start/End: Original strand, 45115544 - 45115697
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactc--a 136  Q
    |||||||||| | |||||||||   |||| ||||| | ||||||| ||||| || |||||||||||| |||||||||||| |||||| |||||||||  |    
T  45115544 tttttacatttgggatgggtttaactatgggttcgggatgggtacctatatacctgttacccgtctcatacccgtgttttgaaatcgaggaaaactcata 45115643  T
Q  137 tacccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 190  Q
    |||||| ||||||||||| ||||| | ||||||||||||||| |||||||||||    
T  45115644 tacccatacccaaacccagtcaaaacggggaaaacccgtcaaattggatttggt 45115697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 39 - 228
Target Start/End: Original strand, 9632372 - 9632561
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || ||||||||||||| ||||| ||||| ||| ||||| ||| ||||||||| | |||||||||||  | |||||||||||| ||||    
T  9632372 tttttacatttgggacgggtttgggtatgggttcggggtggatacctatatacccattacccgtcccatacccgtgtttcgagatcggggaaaacccata 9632471  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    |||| || |||||||| ||||| | || |||||||||||| |||  |||||| || | || || |||| |||||| ||||||||||||||    
T  9632472 cccatactcaaacccattcaaaacgggaaaaacccgtcaaattgagtttggttcgggcgggtaaccacgggtatgggttttgttgccatg 9632561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 55 - 160
Target Start/End: Original strand, 43371555 - 43371660
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 154  Q
    ||||||||||||||||| | ||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||| | |||||||| ||    
T  43371555 gggtttgggtatgagtttggggtgggtacatatatccccgttacccgtcccgtacccgtattttaaaatcggggaaaactcaaaccaatacccaaactca 43371654  T
Q  155 atcaaa 160  Q
     |||||    
T  43371655 gtcaaa 43371660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 55 - 228
Target Start/End: Complemental strand, 13705448 - 13705269
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 154  Q
    |||||| |||||| ||||| ||||||||| ||||| ||||||||| ||||| |||||||||||| ||||||||||||||||||||||| ||||| |||||    
T  13705448 gggtttaggtatgggttcggggtgggtacctatatacccgttacctgtctcatacccgtgttttgaaatcggggaaaactcatacccatacccataccca 13705349  T
Q  155 a------tcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    |      ||||| | ||||||||||||||| |||| | |||| ||   || || |||  |||||||||||||||||||||    
T  13705348 aaccctgtcaaaacggggaaaacccgtcaaattgggtatggttcggacgggtaaccatgggtatgagttttgttgccatg 13705269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 39 - 223
Target Start/End: Original strand, 13830722 - 13830905
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | ||  |||||| ||||| ||||| ||||||||||||||| ||||||||| ||| | |||||||||||| | |||| ||||||| ||||    
T  13830722 tttttacatttgggacaggtttgagtatgggttcggggtgggtacttatatacccgttacc-gtcccatacccgtgttttgagatcgaggaaaacccata 13830820  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttg 223  Q
    |||| ||||||||||| |||||   ||||||||||||||| |||| |||||| || | || || |||| |||||| |||||||||    
T  13830821 cccatacccaaacccagtcaaaatggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacgggtatgggttttgttg 13830905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 55 - 230
Target Start/End: Complemental strand, 44746196 - 44746021
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 154  Q
    ||||||| ||||||||| || |||||||| ||||| ||| ||||||||| | ||  |||||||| |||||||||||||| || | ||| |||||||| ||    
T  44746196 gggtttgagtatgagtttgaagtgggtacatatatacccattacccgtcccatattcgtgttttgaaatcggggaaaacccaaatccatacccaaactca 44746097  T
Q  155 atcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatgtc 230  Q
    |||||| | ||||||||||||||| |||| |||||| || |||| || ||   | |||||||||||||||||||||    
T  44746096 atcaaaacggggaaaacccgtcaaattgggtttggtacgggtgggtaaccgtggatatgagttttgttgccatgtc 44746021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 413 - 580
Target Start/End: Original strand, 21329784 - 21329953
Alignment:
Q  413 atgtgatctaacaaaacatttctttgataatgat--tgtttatgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatcct 510  Q
    ||||||||| || |||| ||||| ||||||||||  ||| ||| ||||||||||| |  | ||||||||||| ||||||||||||| ||| ||| |||||    
T  21329784 atgtgatctgacgaaacctttctgtgataatgatcatgtgtataattacccttttgccctcatgtctatattgaacacaaggcatagaccgtgtcatcct 21329883  T
Q  511 tgtctagtttaatattgaacccatagacatttttgctgatatgtaagaagcgcaaattccatctaggtca 580  Q
    ||||||||| |||||||  ||| ||||||||| | ||| |||||| || | |||||||||||||||||||    
T  21329884 tgtctagttcaatattgggcccgtagacatttctcctgttatgtaggaggggcaaattccatctaggtca 21329953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 39 - 178
Target Start/End: Complemental strand, 7314751 - 7314612
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || |||| |||||||| ||||| |||||| || ||||| ||||||||||||| | ||| ||| ||||||||||||||||||| ||||    
T  7314751 tttttacatttgggacgggtgtgggtatgggttcggggtgggaacctatatacccgttacccgtcccatactcgtattttaaaatcggggaaaacccata 7314652  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaa 178  Q
    |||| | ||||||||| ||||| | ||||||| |||||||    
T  7314651 cccatatccaaacccagtcaaaacggggaaaatccgtcaa 7314612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 39 - 228
Target Start/End: Complemental strand, 36128209 - 36128020
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || ||||||||||||| ||||| |||| |||| ||||| |||||||||| || | |||||||||||  | |||||||||| | ||||    
T  36128209 tttttacatttgggacgggtttgggtatgggttcggggtgagtacctatatacccgttacccatcccatacccgtgtttcgagatcggggaaaccacata 36128110  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    |||| ||||||||||| ||||| | ||||||| ||||||| || | |||||| ||   |  || |||| |||||| ||||||||||||||    
T  36128109 cccatacccaaacccagtcaaaacggggaaaatccgtcaaattaggtttggttcggacgagtaaccacgggtatgggttttgttgccatg 36128020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 61 - 178
Target Start/End: Complemental strand, 37472840 - 37472723
Alignment:
Q  61 gggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaa 160  Q
    ||||||| |||||| |||||||| || || ||||||||||||| | |||||||||||| |||||||||||||  ||||| || ||||||||||| |||||    
T  37472840 gggtatgggttcgaagtgggtacctaaatacccgttacccgtcccatacccgtgttttgaaatcggggaaaatccatactcatacccaaacccagtcaaa 37472741  T
Q  161 gcagggaaaacccgtcaa 178  Q
     | |||||||||||||||    
T  37472740 acggggaaaacccgtcaa 37472723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 39 - 160
Target Start/End: Original strand, 45256809 - 45256930
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || |||||| |||||| ||||| ||||||||||||||| ||| ||| ||||||| |||||||||||| |||||||||||||||||||    
T  45256809 tttttacatttgggacgggtttaggtatgggttcggggtgggtacttatatacccattaaccgtctcatacccgtgttttgaaatcggggaaaactcata 45256908  T
Q  139 cccaaacccaaacccaatcaaa 160  Q
    | || | ||| ||||| |||||    
T  45256909 ctcatatccacacccagtcaaa 45256930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 413 - 580
Target Start/End: Original strand, 22791394 - 22791563
Alignment:
Q  413 atgtgatctaacaaaacatttctttgataatgat--tgtttatgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatcct 510  Q
    ||||||||| || |||| ||||  ||||||||||  ||| ||| ||||||||||| |  | ||||||||||| ||||||||||||| ||| ||| |||||    
T  22791394 atgtgatctgacgaaacctttcagtgataatgatcatgtgtataattacccttttgccctcatgtctatattgaacacaaggcatagaccgtgtcatcct 22791493  T
Q  511 tgtctagtttaatattgaacccatagacatttttgctgatatgtaagaagcgcaaattccatctaggtca 580  Q
    ||||||||| |||||||  ||| |||||| || | ||| |||||| || | |||||||||||||||||||    
T  22791494 tgtctagttcaatattggtcccgtagacaattctcctgttatgtaggaggggcaaattccatctaggtca 22791563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 39 - 228
Target Start/End: Complemental strand, 10208533 - 10208345
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | ||  |||||| ||||| ||||| ||| ||||| |||||  || ||||||||| | |||||||||||||| || ||||||||| ||||    
T  10208533 tttttacatttgggactggtttgagtatgggttcggggtaggtacctatatatccattacccgtcccatacccgtgttttaagattggggaaaacccata 10208434  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    |||| ||||||||||| ||||| | ||||||||| ||||| ||   |||||| || | || ||  ||| |||||||||||||||||||||    
T  10208433 cccatacccaaacccagtcaaaacggggaaaacc-gtcaaattaactttggttcgggcggataatcacgggtatgagttttgttgccatg 10208345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 17 - 124
Target Start/End: Original strand, 30696890 - 30696995
Alignment:
Q  17 aaaaagggcaataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgtt 116  Q
    |||| ||| ||||||||||||  ||||||||| | ||| |||||||||||||||||| ||||||||| |||||| | ||||||||||||||| || ||||    
T  30696890 aaaatgggtaataaattgatt--ttttacatttgggataggtttgggtatgagttcggggtgggtacatatatctctgttacccgtctcgtatccatgtt 30696987  T
Q  117 ttaaaatc 124  Q
    ||||||||    
T  30696988 ttaaaatc 30696995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 107 - 228
Target Start/End: Original strand, 12341654 - 12341775
Alignment:
Q  107 tacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccac 206  Q
    |||| ||||||| |||||||||||||| |||||||| |||||||| || ||||| | ||||||||||||||| |||| |||||| ||   || || || |    
T  12341654 tacctgtgttttgaaatcggggaaaacccatacccatacccaaactcagtcaaaacggggaaaacccgtcaaattgggtttggttcggacggataaccgc 12341753  T
Q  207 aggtatgagttttgttgccatg 228  Q
     |||||||||||||||||||||    
T  12341754 gggtatgagttttgttgccatg 12341775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 39 - 227
Target Start/End: Complemental strand, 8916040 - 8915853
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || ||||||| ||||| ||||| ||||||||| ||||| || |||||||||| | |||||||||||| | ||| | |||||| ||||    
T  8916040 tttttacatttgggacgggtttgagtatgggttcggggtgggtacctatatacctgttacccgtcccatacccgtgttttgagatc-gagaaaacccata 8915942  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccat 227  Q
    |||| | |||||| || ||||| | || |||| ||||||| ||| ||||| |  | | || || ||||||||||| |||||||||||||    
T  8915941 cccatatccaaactcagtcaaaacgggaaaaatccgtcaaattgaatttgatttgggcggataaccacaggtatgggttttgttgccat 8915853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 55 - 146
Target Start/End: Original strand, 14331529 - 14331620
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacc 146  Q
    ||||||||||||| |||||  |||||||| ||||||||||||||||||| | |||| || |||| |||| ||||||||| ||||||||||||    
T  14331529 gggtttgggtatgggttcggagtgggtacatatatccccgttacccgtcccatacctgtatttttaaataggggaaaacccatacccaaacc 14331620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 55 - 178
Target Start/End: Original strand, 22900796 - 22900919
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 154  Q
    |||| |||||||||||||| ||||||||  |||| ||||||||| |||| | |||||||||||| |||||||| ||||| || ||||| ||||| ||| |    
T  22900796 gggtatgggtatgagttcggggtgggtatatataaccccgttactcgtcccatacccgtgttttgaaatcgggaaaaacccaaacccatacccagaccaa 22900895  T
Q  155 atcaaagcagggaaaacccgtcaa 178  Q
     ||||||   ||||||||||||||    
T  22900896 gtcaaagtgaggaaaacccgtcaa 22900919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 55 - 178
Target Start/End: Complemental strand, 35248472 - 35248349
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 154  Q
    ||||||||||||| ||||| ||||||||| | ||||||| ||||||||| | ||||||||||||  ||||| ||||||| || ||||  |||||||| ||    
T  35248472 gggtttgggtatgggttcggggtgggtacctttatcccctttacccgtcccatacccgtgttttgtaatcgtggaaaacccaaacccgtacccaaactca 35248373  T
Q  155 atcaaagcagggaaaacccgtcaa 178  Q
    |||||||   ||||||||| ||||    
T  35248372 atcaaagtgaggaaaacccatcaa 35248349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 17 - 143
Target Start/End: Original strand, 35965301 - 35965424
Alignment:
Q  17 aaaaagggcaataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgtt 116  Q
    |||| ||||||||||||||||  || |||||||| || ||||||||||||| |||||  |||||||| | ||||||| |||| | || | ||||||||||    
T  35965301 aaaaggggcaataaattgatt--ttctacattcgggacgggtttgggtatgggttcggagtgggtacatgtatccccattacacatc-catacccgtgtt 35965397  T
Q  117 ttaaaatcggggaaaactcatacccaa 143  Q
    || ||||||||||||||||| ||||||    
T  35965398 ttgaaatcggggaaaactcaaacccaa 35965424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 39 - 189
Target Start/End: Complemental strand, 12193930 - 12193780
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || |||| ||| ||||  |||||||||||||  ||||| ||| ||||||||| | |||||||||| | |||||||| ||||| ||||    
T  12193930 tttttacatttgggacgggtatggatatggattcgaggtgggtatctatatacccattacccgtcccatacccgtgttctgaaatcgggaaaaacacata 12193831  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttgg 189  Q
    | || ||||||||||| |||||   || |||||||||||| |||| |||||    
T  12193830 ctcatacccaaacccagtcaaaatcggaaaaacccgtcaaattgggtttgg 12193780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 17 - 143
Target Start/End: Complemental strand, 17845515 - 17845390
Alignment:
Q  17 aaaaagggcaataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgtt 116  Q
    |||||||  |||||||||||| |||||||||||| || ||||||||||||| |||   |||||||||||||||  || ||||| ||||| ||| ||||||    
T  17845515 aaaaaggataataaattgatt-tttttacattcgagacgggtttgggtatgggttaagggtgggtacttatatgtccattaccggtctcatactcgtgtt 17845417  T
Q  117 ttaaaatcggggaaaactcatacccaa 143  Q
    || ||||||  ||||||||| ||||||    
T  17845416 ttgaaatcgaagaaaactcaaacccaa 17845390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 455 - 580
Target Start/End: Complemental strand, 18797133 - 18797008
Alignment:
Q  455 attaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatccttgtctagtttaatattgaacccatagacatttttgctgatatgt 554  Q
    |||||||||||||  | ||||||||||| || |||||||||| ||||||| |||||||||||||| |||||||  ||| ||||||||| | ||  |||||    
T  18797133 attaccctttttccctcatgtctatattgaatacaaggcataaaccatgtcatccttgtctagttcaatattgggcccgtagacatttctcctattatgt 18797034  T
Q  555 aagaagcgcaaattccatctaggtca 580  Q
    | || | | ||||| |||||||||||    
T  18797033 aggaggggaaaatttcatctaggtca 18797008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 63 - 143
Target Start/End: Complemental strand, 6027968 - 6027888
Alignment:
Q  63 gtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaa 143  Q
    ||||| ||||| ||||||||| ||||| || |||||||||||| ||||| ||||||||||||||||||||| || ||||||    
T  6027968 gtatgggttcggggtgggtacctatatacctgttacccgtctcatacccatgttttaaaatcggggaaaacccaaacccaa 6027888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 56 - 223
Target Start/End: Complemental strand, 31942272 - 31942104
Alignment:
Q  56 ggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtg-ttttaaaatcggggaaaactcatacccaaacccaaaccca 154  Q
    ||||||| |||| ||| | ||||||||||||||| || |||||||||||| |||||||| |||| |||||| ||| ||| || ||||| | |||||||||    
T  31942272 ggtttggttatgggtttggggtgggtacttatatacctgttacccgtctcatacccgtgtttttgaaatcgaggataacccaaacccatatccaaaccca 31942173  T
Q  155 atcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttg 223  Q
     ||||||| || ||||||| |||| |||  ||||||  | | || || |||| |||||| |||||||||    
T  31942172 gtcaaagcgggaaaaacccatcaaattgagtttggtttgggcgggtaaccacgggtatgggttttgttg 31942104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 39 - 178
Target Start/End: Original strand, 15546730 - 15546869
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || |||| |||||||| ||||  ||||||||  |||| ||  |||||||||| | |||||||||||| |||||||||||||| || |    
T  15546730 tttttacatttgggaagggtatgggtatgggttcagggtgggtatatataaccatgttacccgtcccatacccgtgttttgaaatcggggaaaacccaaa 15546829  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaa 178  Q
    ||||  |||| | ||| ||||||| |||||||| ||||||    
T  15546830 cccatgcccagatccagtcaaagcggggaaaactcgtcaa 15546869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 39 - 118
Target Start/End: Complemental strand, 42798091 - 42798012
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgtttt 118  Q
    |||||||||| | ||  |||||| ||||| ||||| ||||||||||||||| ||||||||||||||| ||||||||||||    
T  42798091 tttttacatttgggacaggtttgtgtatgggttcggggtgggtacttatatacccgttacccgtctcatacccgtgtttt 42798012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 43 - 133
Target Start/End: Original strand, 25210367 - 25210457
Alignment:
Q  43 tacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaac 133  Q
    |||||||| || |||||| |||||| ||| | ||||||||| ||||||| ||||||||||| | ||||||||||||||| ||||| |||||    
T  25210367 tacattcgggaggggttttggtatgggtttggggtgggtacatatatcctcgttacccgtcccatacccgtgttttaaagtcgggaaaaac 25210457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 126
Target Start/End: Original strand, 3547168 - 3547239
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcgg 126  Q
    |||||||| |||| ||||| ||||||||| |||||| |||||||||||| ||||||||| |||| |||||||    
T  3547168 gggtttggatatgggttcggggtgggtacatatatctccgttacccgtcccgtacccgtattttgaaatcgg 3547239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 61 - 156
Target Start/End: Complemental strand, 24051705 - 24051610
Alignment:
Q  61 gggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaat 156  Q
    ||||||| ||||| ||| ||||| |||||||| |||||||||| | ||| ||| |||||||||||| |||| | || ||||| |||||||||||||    
T  24051705 gggtatgggttcggggtaggtacatatatccctgttacccgtcccatactcgtattttaaaatcggagaaatcccaaacccatacccaaacccaat 24051610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 76 - 230
Target Start/End: Original strand, 13954769 - 13954922
Alignment:
Q  76 gtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgt 175  Q
    ||||| ||| ||||||  |||||| ||| |||||| ||||||||||||||||||||| ||| || || ||||||||||| |||||||   ||||||| ||    
T  13954769 gtgggcactaatatccttgttacctgtcccgtacc-gtgttttaaaatcggggaaaattcaaacacatacccaaacccagtcaaagcgtagaaaacctgt 13954867  T
Q  176 caacttggatttggtccgagtggctacccacaggtatgagttttgttgccatgtc 230  Q
    ||| |||  ||||||  ||| || ||  | | ||||| |||||||||||||||||    
T  13954868 caatttgcgtttggttagagcgggtattcgcgggtattagttttgttgccatgtc 13954922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 76 - 230
Target Start/End: Original strand, 14095976 - 14096129
Alignment:
Q  76 gtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgt 175  Q
    ||||| ||| ||||||  |||||| ||| |||||| ||||||||||||||||||||| ||| || || ||||||||||| |||||||   ||||||| ||    
T  14095976 gtgggcactaatatccttgttacctgtcccgtacc-gtgttttaaaatcggggaaaattcaaacacatacccaaacccagtcaaagcgtagaaaacctgt 14096074  T
Q  176 caacttggatttggtccgagtggctacccacaggtatgagttttgttgccatgtc 230  Q
    ||| |||  ||||||  ||| || ||  | | ||||| |||||||||||||||||    
T  14096075 caatttgcgtttggttagagcgggtattcgcgggtattagttttgttgccatgtc 14096129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 56 - 142
Target Start/End: Original strand, 18485651 - 18485737
Alignment:
Q  56 ggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcataccca 142  Q
    |||||||||||| ||||  ||||||||| ||||||||||||||||||   |||||||| ||||||||||| ||| ||| || |||||    
T  18485651 ggtttgggtatgggttcagggtgggtacatatatccccgttacccgtactgtacccgtattttaaaatcgaggataacccaaaccca 18485737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 190
Target Start/End: Complemental strand, 40734662 - 40734536
Alignment:
Q  64 tatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagca 163  Q
    |||||||||| | ||| | | |||||| | |||||||||||| ||||||||||| |||||||  |||||| || |  || ||||||||| |||||||||     
T  40734662 tatgagttcgggatggattcatatatctctgttacccgtctcatacccgtgtttgaaaatcgctgaaaacccaaattcatacccaaaccaaatcaaagcg 40734563  T
Q  164 gggaaaacccgtcaacttggatttggt 190  Q
    |  |||||||||||| ||| |||||||    
T  40734562 gataaaacccgtcaaattgaatttggt 40734536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 135 - 228
Target Start/End: Original strand, 10920720 - 10920813
Alignment:
Q  135 catacccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    |||||||| ||||||||||| ||||| | |||||||||  |||| ||||||||||| || | || || |||| |||||| ||||||||||||||    
T  10920720 catacccatacccaaacccagtcaaaacggggaaaacctatcaaattggatttggttcgggcgggtaaccacgggtatgggttttgttgccatg 10920813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 142
Target Start/End: Complemental strand, 6164553 - 6164473
Alignment:
Q  62 ggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcataccca 142  Q
    |||||||||||| ||||||||| |||||| |||||||||||| |||||||   |||| |||| ||||||||| || |||||    
T  6164553 ggtatgagttcggggtgggtacatatatcaccgttacccgtcccgtacccaaattttgaaattggggaaaacccaaaccca 6164473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 76 - 135
Target Start/End: Original strand, 14540804 - 14540863
Alignment:
Q  76 gtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactc 135  Q
    |||||| | ||||| ||||||||| ||||| |||||||||||| ||||||||||||||||    
T  14540804 gtgggtgcctatatacccgttacctgtctcatacccgtgttttgaaatcggggaaaactc 14540863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 107 - 178
Target Start/End: Complemental strand, 18106154 - 18106083
Alignment:
Q  107 tacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaa 178  Q
    |||||||||||| | |||||||||||| |||||||| | ||||||||| ||||| | ||||||| |||||||    
T  18106154 tacccgtgttttgagatcggggaaaacccatacccatatccaaacccagtcaaaacggggaaaatccgtcaa 18106083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 228
Target Start/End: Complemental strand, 6027901 - 6027815
Alignment:
Q  142 aaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    ||||||||||||||||||| | ||||||||||||||| |||| |||||| || | || || ||||  ||||| ||||||||| ||||    
T  6027901 aaacccaaacccaatcaaaacggggaaaacccgtcaaattgggtttggttcgggcggataaccacgagtatgggttttgttgtcatg 6027815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 142
Target Start/End: Original strand, 4427909 - 4428013
Alignment:
Q  38 ctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcat 137  Q
    |||| |||||||| |  ||||||||||||| ||||||||||| | | |||||| ||||| |||||| | ||||||| || | || ||||||||||| ||     
T  4427909 ctttctacattcgggtagggtttgggtatgggttcgaggtggatccatatatcaccgttgcccgtcccttacccgtattatgaagtcggggaaaacccaa 4428008  T
Q  138 accca 142  Q
    |||||    
T  4428009 accca 4428013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 10212443 - 10212531
Alignment:
Q  90 ccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaa 178  Q
    |||||||||| ||| |||| ||||||||  |||||||||||||| || || || ||| ||||||| ||||| |||| ||||| ||||||    
T  10212443 ccccgttacctgtcccgtaaccgtgtttggaaatcggggaaaacccaaactcataccaaaacccagtcaaaacaggaaaaactcgtcaa 10212531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 109
Target Start/End: Original strand, 11958990 - 11959071
Alignment:
Q  26 aataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtac 109  Q
    ||||||||||||  || ||||||| ||||| ||||||||||||||||| ||   |||| ||||||| ||||||||||| |||||    
T  11958990 aataaattgatt--ttatacattcatgatgagtttgggtatgagttcggggcatgtacatatatcctcgttacccgtcccgtac 11959071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 228
Target Start/End: Original strand, 25213945 - 25214016
Alignment:
Q  157 caaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    |||||| ||||||||||||||| ||||||||||| || |||| |||||   | |||| ||||||||||||||    
T  25213945 caaagcggggaaaacccgtcaaattggatttggttcgggtgggtacccgtggatatgggttttgttgccatg 25214016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 136
Target Start/End: Original strand, 34320653 - 34320708
Alignment:
Q  81 tacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactca 136  Q
    |||||||||||||||||  | |||| |||| |||||||||||||| ||||||||||    
T  34320653 tacttatatccccgttagtcatctcatacctgtgttttaaaatcgaggaaaactca 34320708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 114
Target Start/End: Complemental strand, 4961536 - 4961479
Alignment:
Q  57 gtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtg 114  Q
    ||||||||||| |||||||||| |||| |||||||| ||||| |||| | ||||||||    
T  4961536 gtttgggtatgggttcgaggtgtgtacctatatccctgttacacgtcccatacccgtg 4961479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 178
Target Start/End: Original strand, 26755764 - 26755865
Alignment:
Q  77 tgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtc 176  Q
    ||||||| |||||||||||||  ||||   ||||| | |||||||||||  |||||| || || || ||||||||||| ||||| | || ||||||||||    
T  26755764 tgggtacatatatccccgttaatcgtccgatacccatattttaaaatcgaagaaaacccaaactcatacccaaacccagtcaaatcgggaaaaacccgtc 26755863  T
Q  177 aa 178  Q
    ||    
T  26755864 aa 26755865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 133
Target Start/End: Original strand, 33175252 - 33175309
Alignment:
Q  76 gtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaac 133  Q
    |||||||| ||||| | || |||||| | |||||||||||||||||||||| ||||||    
T  33175252 gtgggtacctatatacacgctacccgacccgtacccgtgttttaaaatcggagaaaac 33175309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 228
Target Start/End: Complemental strand, 34214744 - 34214573
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 154  Q
    ||||||| |||||||||||| |||||| |  ||||  ||| |||  ||| |||||||||||||| |||| | | |||||||| || || ||  |||||||    
T  34214744 gggtttgagtatgagttcgaagtgggtgccaatataaccgatacatgtcccgtacccgtgttttgaaattgagaaaaactcaaactcatacaaaaaccca 34214645  T
Q  155 atcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    |||||||| || |||| ||||||| |||| ||| ||  |||||  ||||| || ||||| | ||||||||||||    
T  34214644 atcaaagc-ggaaaaaaccgtcaaattgggtttagtttgagtgagtacccgcatgtatg-ggtttgttgccatg 34214573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 89; Significance: 2e-42; HSPs: 55)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 39 - 227
Target Start/End: Complemental strand, 5863486 - 5863298
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || ||||||||||||| ||||||||||||||  ||||| ||||||||||||| | |||||||||||| |||||||||||||| ||||    
T  5863486 tttttacatttgggacgggtttgggtatgggttcgaggtgggtatctatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaacccata 5863387  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccat 227  Q
    |||| ||||||||||| ||||| | ||||||||||||||| |||| |||||| || |  | || |||| |||||| |||||||||||||    
T  5863386 cccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgggcaggtaaccacgggtatgggttttgttgccat 5863298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 39 - 228
Target Start/End: Original strand, 27534669 - 27534858
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || |||||||||||||  |||| ||||||||| ||||| ||||||||||||| | |||||||||||  | |||||||||||||||||    
T  27534669 tttttacatttgggacgggtttgggtatggattcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaactcata 27534768  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    |||| ||||||||||||||||| | ||||||||||||||| |||  |||||| ||   || || |||| |||||| ||||||||||||||    
T  27534769 cccatacccaaacccaatcaaaacggggaaaacccgtcaaattgagtttggttcggacggttaaccacgggtatgggttttgttgccatg 27534858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 39 - 230
Target Start/End: Original strand, 32853829 - 32854020
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || ||||||||||||| ||||| ||||||||| ||||| ||||||||||||| | |||||||||||| | |||||||||||| ||||    
T  32853829 tttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccata 32853928  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatgtc 230  Q
    |||| | ||||||||| ||||| | | ||||||||||||| |||| |||||| ||   || || |||| |||||| ||||||||||||||||    
T  32853929 cccataaccaaacccagtcaaaacggagaaaacccgtcaaattgggtttggttcggtcggataaccacgggtatgggttttgttgccatgtc 32854020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 39 - 228
Target Start/End: Complemental strand, 10142621 - 10142432
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | ||  |||||||||||||||||| ||||||||| ||||| ||||||||| ||| | ||||||| |||| | |||||||||||| ||||    
T  10142621 tttttacatttgggacaggtttgggtatgagttcggggtgggtacctatatacccgttacctgtcccatacccgttttttgagatcggggaaaacccata 10142522  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    |||| ||||||||||| ||||| |  |||||||||| ||| |||  |||||| |||| || || ||||| ||||| ||||||||||||||    
T  10142521 cccatacccaaacccagtcaaaacgaggaaaacccgccaaattgagtttggttcgagcggataaccacaagtatgggttttgttgccatg 10142432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 39 - 228
Target Start/End: Original strand, 12141370 - 12141559
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || ||||||||||||| ||||| ||||||||| ||||| ||||| ||||||| | || ||||||||| | || ||||||||| ||||    
T  12141370 tttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgtcacccgtcccatatccgtgttttgagattggggaaaacccata 12141469  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    |||  ||||||||||| ||||| | ||||||||||||||| ||| ||||||| || | || || ||| ||||||| ||||||||||||||    
T  12141470 cccgtacccaaacccagtcaaaacggggaaaacccgtcaaattgaatttggttcgggcgggtaaccataggtatgggttttgttgccatg 12141559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 39 - 228
Target Start/End: Complemental strand, 10188176 - 10187994
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | |||||||||||||||| ||||| ||||||||| |||||       ||||||| | |||||||||||| | |||||||||||| ||||    
T  10188176 tttttacatttgggatgggtttgggtatgggttcggggtgggtacctatat-------acccgtcccatacccgtgttttgagatcggggaaaacccata 10188084  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    |||| ||||||||||| ||||| | ||||||||||||||| |||| |||||| || | || || |||| |||||| ||||||||||||||    
T  10188083 cccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacgggtatgggttttgttgccatg 10187994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 55 - 228
Target Start/End: Original strand, 2367327 - 2367500
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 154  Q
    ||||||||||||| ||||| ||||||||||||||| ||||||||||||| | |||||||||||| | |||||||||||| |||||||| ||||||||| |    
T  2367327 gggtttgggtatgggttcggggtgggtacttatatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccatacccatacccaaaccta 2367426  T
Q  155 atcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
     ||||| | || ||||||| |||| |||| |||||| ||   || || |||| | |||| ||||||||||||||    
T  2367427 gtcaaaacgggaaaaacccatcaaattgggtttggttcggacgggtaaccacggatatgggttttgttgccatg 2367500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 39 - 228
Target Start/End: Complemental strand, 3484026 - 3483837
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || ||||||||||||| ||||| ||||||||| ||||| |||||||||| || | |||||||||||  | |||||||||||| ||||    
T  3484026 tttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccatcccatacccgtgtttcgagatcggggaaaacccata 3483927  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    | || ||||||||||| ||||| | ||||||||||||||| |||| |||||| || | || || |||   ||||| ||||||||||||||    
T  3483926 cacatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgggcgggtaaccatgagtatgggttttgttgccatg 3483837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 58 - 228
Target Start/End: Complemental strand, 28079780 - 28079610
Alignment:
Q  58 tttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatc 157  Q
    |||||||||| ||||| ||||||||| ||||||||||||||||||| ||||||| |||||| |||||||||||||| || ||||| |||||||| ||  |    
T  28079780 tttgggtatgggttcggggtgggtacctatatccccgttacccgtcccgtacccatgttttgaaatcggggaaaacccaaacccatacccaaactcagcc 28079681  T
Q  158 aaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    ||||| || || |||||||||  ||| ||||||  | |||| ||||| | |||||| ||||||||| ||||    
T  28079680 aaagcgggaaatacccgtcaaaatgggtttggtatgggtgggtacccgcgggtatgggttttgttgtcatg 28079610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 39 - 190
Target Start/End: Original strand, 27738757 - 27738908
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || ||||||||||||| ||||| ||||||||| |||||  | |||||||||| | |||||||||||| |||||||||||||| ||||    
T  27738757 tttttacatttgggacgggtttgggtatgggttcggggtgggtacatatatatctgttacccgtcccatacccgtgttttgaaatcggggaaaacccata 27738856  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 190  Q
    |||| ||| ||||||| ||||| | || ||||||| |||| ||| |||||||    
T  27738857 cccatacctaaacccagtcaaaacgggaaaaacccatcaaattgaatttggt 27738908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 413 - 580
Target Start/End: Complemental strand, 11652394 - 11652225
Alignment:
Q  413 atgtgatctaacaaaacatttctttgataatgatt--gtttatgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatcct 510  Q
    ||||||||| || |||| ||||| | |||||||||  || ||| ||||||||||| || | ||||||||||| ||||||||||||| ||| ||| |||||    
T  11652394 atgtgatctgacgaaacctttctgtaataatgattatgtgtataattacccttttgctctcatgtctatattgaacacaaggcatagaccgtgtcatcct 11652295  T
Q  511 tgtctagtttaatattgaacccatagacatttttgctgatatgtaagaagcgcaaattccatctaggtca 580  Q
    ||||||||| |||||||  ||| ||||||||| | ||| |||||| || | |||||||||||||||||||    
T  11652294 tgtctagttcaatattgggcccgtagacatttctcctgttatgtaggaggggcaaattccatctaggtca 11652225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 413 - 580
Target Start/End: Original strand, 17690976 - 17691145
Alignment:
Q  413 atgtgatctaacaaaacatttctttgataatgat--tgtttatgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatcct 510  Q
    ||||||||| || |||| ||||| ||||||||||  ||| ||| ||||||||||| |  | ||||||||||| ||||||||||||| ||| ||| |||||    
T  17690976 atgtgatctgacgaaacctttctgtgataatgatcatgtgtataattacccttttgccctcatgtctatattgaacacaaggcatagaccgtgtcatcct 17691075  T
Q  511 tgtctagtttaatattgaacccatagacatttttgctgatatgtaagaagcgcaaattccatctaggtca 580  Q
    ||||||||| |||||||  ||| ||||||||| | ||| |||||| || | |||||||||||||||||||    
T  17691076 tgtctagttcaatattgggcccgtagacatttctcctgttatgtaggaggggcaaattccatctaggtca 17691145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 413 - 580
Target Start/End: Original strand, 27380788 - 27380957
Alignment:
Q  413 atgtgatctaacaaaacatttctttgataatgat--tgtttatgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatcct 510  Q
    ||||||||| || |||| ||||| ||||||||||  ||| ||| ||||||||||| |  | ||||||||||| ||||||||||||| ||| ||| |||||    
T  27380788 atgtgatctgacgaaacctttctgtgataatgatcatgtgtataattacccttttgccctcatgtctatattgaacacaaggcatagaccgtgtcatcct 27380887  T
Q  511 tgtctagtttaatattgaacccatagacatttttgctgatatgtaagaagcgcaaattccatctaggtca 580  Q
    ||||||||| |||||||  ||| ||||||||| | ||| |||||| || | |||||||||||||||||||    
T  27380888 tgtctagttcaatattgggcccgtagacatttctcctgttatgtaggaggggcaaattccatctaggtca 27380957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 413 - 580
Target Start/End: Original strand, 27471171 - 27471340
Alignment:
Q  413 atgtgatctaacaaaacatttctttgataatgat--tgtttatgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatcct 510  Q
    ||||||||| || |||| ||||| ||||||||||  ||| ||| ||||||||||| |  | ||||||||||| ||||||||||||| ||| ||| |||||    
T  27471171 atgtgatctgacgaaacctttctgtgataatgatcatgtgtataattacccttttgccctcatgtctatattgaacacaaggcatagaccgtgtcatcct 27471270  T
Q  511 tgtctagtttaatattgaacccatagacatttttgctgatatgtaagaagcgcaaattccatctaggtca 580  Q
    ||||||||| |||||||  ||| ||||||||| | ||| |||||| || | |||||||||||||||||||    
T  27471271 tgtctagttcaatattgggcccgtagacatttctcctgttatgtaggaggggcaaattccatctaggtca 27471340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 413 - 580
Target Start/End: Complemental strand, 29309561 - 29309392
Alignment:
Q  413 atgtgatctaacaaaacatttctttgataatgat--tgtttatgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatcct 510  Q
    ||||||||| || |||| ||||| ||||||||||  ||| ||| ||||||||||| |  | ||||||||||| ||||||||||||| ||| ||| |||||    
T  29309561 atgtgatctgacgaaacctttctgtgataatgatcatgtgtataattacccttttgccctcatgtctatattgaacacaaggcatagaccgtgtcatcct 29309462  T
Q  511 tgtctagtttaatattgaacccatagacatttttgctgatatgtaagaagcgcaaattccatctaggtca 580  Q
    ||||||||| |||||||  ||| ||||||||| | ||| |||||| || | |||||||||||||||||||    
T  29309461 tgtctagttcaatattgggcccgtagacatttctcctgttatgtaggaggggcaaattccatctaggtca 29309392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 413 - 580
Target Start/End: Complemental strand, 29316520 - 29316351
Alignment:
Q  413 atgtgatctaacaaaacatttctttgataatgat--tgtttatgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatcct 510  Q
    ||||||||| || |||| ||||| ||||||||||  ||| ||| ||||||||||| |  | ||||||||||| ||||||||||||| ||| ||| |||||    
T  29316520 atgtgatctgacgaaacctttctgtgataatgatcatgtgtataattacccttttgccctcatgtctatattgaacacaaggcatagaccgtgtcatcct 29316421  T
Q  511 tgtctagtttaatattgaacccatagacatttttgctgatatgtaagaagcgcaaattccatctaggtca 580  Q
    ||||||||| |||||||  ||| ||||||||| | ||| |||||| || | |||||||||||||||||||    
T  29316420 tgtctagttcaatattgggcccgtagacatttctcctgttatgtaggaggggcaaattccatctaggtca 29316351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 58 - 178
Target Start/End: Original strand, 9458667 - 9458787
Alignment:
Q  58 tttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatc 157  Q
    |||||||||||||||||||||||||| ||||||||||||| | ||| ||||||||| |||| |||| ||||||| |||| || || ||||||||||| ||    
T  9458667 tttgggtatgagttcgaggtgggtacatatatccccgttatctgtcccgtacccgtattttgaaattggggaaatctcaaactcatacccaaacccagtc 9458766  T
Q  158 aaagcagggaaaacccgtcaa 178  Q
    ||| | ||||||| |||||||    
T  9458767 aaatcggggaaaatccgtcaa 9458787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 39 - 228
Target Start/End: Original strand, 24225683 - 24225878
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaa------a 132  Q
    |||||||||| | || ||||||||| ||| ||||| ||||||||| ||||| ||||||||||||| | || ||||||||| | ||||||||||      |    
T  24225683 tttttacatttgggacgggtttgggcatgggttcggggtgggtacctatatacccgttacccgtcccatatccgtgttttgagatcggggaaaatccata 24225782  T
Q  133 ctcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    | |||||||||||||||||||||||||| | ||||||||| ||||| ||| ||||||| ||   || || |||  |||||||||||||||| ||||    
T  24225783 cccatacccaaacccaaacccaatcaaaacggggaaaacctgtcaaattgaatttggttcggacgggtaaccatgggtatgagttttgttgtcatg 24225878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 84 - 228
Target Start/End: Original strand, 30986283 - 30986427
Alignment:
Q  84 ttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaacttgg 183  Q
    |||||| ||||||||||||| | |||||||||||| | |||||||||||| |||||||| |||||||| || ||||| | ||||||||||||||| |||     
T  30986283 ttatatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccatacccatacccaaactcagtcaaaacggggaaaacccgtcaaattga 30986382  T
Q  184 atttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
     |||||| || | || || |||| |||||| ||||||||||||||    
T  30986383 gtttggttcgggcgggtaaccacgggtatgggttttgttgccatg 30986427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 55 - 170
Target Start/End: Complemental strand, 256579 - 256464
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 154  Q
    ||||||||||||| ||| | ||||||||| ||||| ||| ||||||||||||||||| |||||| ||||||||||||||||| || || |||||||| ||    
T  256579 gggtttgggtatgggtttggggtgggtacctatatgcccattacccgtctcgtacccatgttttgaaatcggggaaaactcaaactcatacccaaacaca 256480  T
Q  155 atcaaagcagggaaaa 170  Q
    | |||||| |||||||    
T  256479 accaaagcggggaaaa 256464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 413 - 580
Target Start/End: Original strand, 17684005 - 17684174
Alignment:
Q  413 atgtgatctaacaaaacatttctttgataatgattgttt--atgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatcct 510  Q
    ||||||||| || |||| ||||| |||||||| |  |||  || ||||||||||| |  | ||||||||||| ||||||||||||| ||| ||| |||||    
T  17684005 atgtgatctgacgaaacttttctgtgataatgttcatttgtataattacccttttgcccttatgtctatattgaacacaaggcatagaccgtgtcatcct 17684104  T
Q  511 tgtctagtttaatattgaacccatagacatttttgctgatatgtaagaagcgcaaattccatctaggtca 580  Q
    ||||||||| |||||||  ||||||||||||| | ||| |||||| || | |||||||||||||||||||    
T  17684105 tgtctagttcaatattgggcccatagacatttctcctgttatgtaggaggggcaaattccatctaggtca 17684174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 413 - 580
Target Start/End: Complemental strand, 27297300 - 27297131
Alignment:
Q  413 atgtgatctaacaaaacatttctttgataatgat--tgtttatgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatcct 510  Q
    ||||||||| || |||| ||||| ||||||||||  ||| ||| ||||||||||| |  | ||||||||||| ||||||||||||| ||  ||| |||||    
T  27297300 atgtgatctgacgaaacctttctgtgataatgatcatgtgtataattacccttttgccctcatgtctatattgaacacaaggcatagactgtgtcatcct 27297201  T
Q  511 tgtctagtttaatattgaacccatagacatttttgctgatatgtaagaagcgcaaattccatctaggtca 580  Q
    ||||||||| |||||||  ||| ||||||||| | ||| |||||| || | |||||||||||||||||||    
T  27297200 tgtctagttcaatattgggcccgtagacatttctcctgttatgtaggaggggcaaattccatctaggtca 27297131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 39 - 188
Target Start/End: Original strand, 15498309 - 15498458
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || |||||||||| || ||||| | ||||||| ||||| ||| ||||| ||||| |||||||||||| |||||||||||||| ||||    
T  15498309 tttttacatttgggacgggtttgggtgtgggttcgggatgggtacctatatacccattacctgtctcatacccgtgttttgaaatcggggaaaacccata 15498408  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttg 188  Q
     ||| ||||||||||| ||||| | | |||||||||| || |||| ||||    
T  15498409 tccatacccaaacccattcaaaacggagaaaacccgttaaattgggtttg 15498458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 39 - 188
Target Start/End: Original strand, 32532525 - 32532674
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || |||| || ||||| ||||| ||||||||| ||||| ||| ||||||||| | |||||||||||| |||||||||||||| ||||    
T  32532525 tttttacatttgggacgggtatgagtatgggttcggggtgggtacctatatacccattacccgtcccatacccgtgttttgaaatcggggaaaacccata 32532624  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttg 188  Q
    | || || |||||||||| ||| | |  |||||||||||| |||||||||    
T  32532625 ctcatactcaaacccaatgaaaacggaaaaaacccgtcaaattggatttg 32532674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 57 - 160
Target Start/End: Original strand, 9458861 - 9458964
Alignment:
Q  57 gtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaat 156  Q
    |||||||||| |||||| ||||||||| ||||| |||||||||| || ||||||||| || | |||||||||||||| || ||||| ||||||||||| |    
T  9458861 gtttgggtataagttcggggtgggtacatatattcccgttacccatcccgtacccgtattattaaatcggggaaaacccagacccatacccaaacccagt 9458960  T
Q  157 caaa 160  Q
    ||||    
T  9458961 caaa 9458964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 55 - 193
Target Start/End: Original strand, 32053089 - 32053221
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 154  Q
    ||||||||||||| ||| | ||||||||| ||||| ||||||||||||| | || || |||||| ||||||||||||      ||||| |||||||||||    
T  32053089 gggtttgggtatgggtttggggtgggtacatatatacccgttacccgtcccatatccatgttttgaaatcggggaaa------acccatacccaaaccca 32053182  T
Q  155 atcaaagcagggaaaacccgtcaacttggatttggtccg 193  Q
     ||||| | ||||||||||||||| |||| |||||||||    
T  32053183 gtcaaaacggggaaaacccgtcaaattgggtttggtccg 32053221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 58 - 132
Target Start/End: Original strand, 20349068 - 20349142
Alignment:
Q  58 tttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaa 132  Q
    |||||||||||||||| ||||||||| |||||||||||||| |||| | |||||||||||| |||||||||||||    
T  20349068 tttgggtatgagttcggggtgggtacctatatccccgttactcgtcccatacccgtgttttgaaatcggggaaaa 20349142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 55 - 136
Target Start/End: Complemental strand, 14410942 - 14410861
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactca 136  Q
    ||||||||||||| ||||| ||||||||| ||||| ||||||||||||| | |||||||||||| ||||| |||||||||||    
T  14410942 gggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgaaatctgggaaaactca 14410861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 43 - 160
Target Start/End: Original strand, 29341245 - 29341362
Alignment:
Q  43 tacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcataccca 142  Q
    |||||||| || ||||||||||||||||| | | ||||||| |||||| |||||||||||||| | ||| ||||| ||||||||| ||||| || || ||    
T  29341245 tacattcgggacgggtttgggtatgagtttgggatgggtacctatatctccgttacccgtctcatgcccatgtttgaaaatcgggaaaaacccaaactca 29341344  T
Q  143 aacccaaacccaatcaaa 160  Q
     | |||||||||||||||    
T  29341345 tatccaaacccaatcaaa 29341362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 39 - 155
Target Start/End: Original strand, 12309557 - 12309673
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || ||||||||||||  ||||| ||||||||| ||||| || |||||||||  | |||||||||||| ||||| ||||| || ||||    
T  12309557 tttttacatttgggacgggtttgggtatcggttcggggtgggtacatatatacctgttacccgttccatacccgtgttttgaaatcagggaatacccata 12309656  T
Q  139 cccaaacccaaacccaa 155  Q
    |||| ||||||||||||    
T  12309657 cccatacccaaacccaa 12309673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 472 - 580
Target Start/End: Original strand, 25536788 - 25536896
Alignment:
Q  472 atgtctatattaaacacaaggcatacaccatgtgatccttgtctagtttaatattgaacccatagacatttttgctgatatgtaagaagcgcaaattcca 571  Q
    ||||||||||| ||||||||||||| ||| ||| |||||||||||||| |||||||  | | ||||||||| | ||| |||||| || | ||||||||||    
T  25536788 atgtctatattgaacacaaggcatagaccgtgtcatccttgtctagttcaatattgggcacgtagacatttctcctgttatgtaggaggggcaaattcca 25536887  T
Q  572 tctaggtca 580  Q
    |||||||||    
T  25536888 tctaggtca 25536896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 43 - 142
Target Start/End: Complemental strand, 24602955 - 24602856
Alignment:
Q  43 tacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcataccca 142  Q
    ||||||||||||||||||||||||| ||||| ||||||||  ||||| || |||||||||| | ||||| |||||| ||||| |||||||| || |||||    
T  24602955 tacattcgtgatgggtttgggtatgggttcggggtgggtatctatatacctgttacccgtcacatacccatgttttgaaatctgggaaaacccaaaccca 24602856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 39 - 190
Target Start/End: Original strand, 30816245 - 30816394
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    ||||| |||||| || |||||||| |||| ||||| ||||||| | ||||| ||| |||||| || | ||||||||||| ||||| |||||||||||| |    
T  30816245 tttttgcattcgggacgggtttggatatgggttcggggtgggttcctatatacccattacccatcccatacccgtgttt-aaaat-ggggaaaactcaaa 30816342  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 190  Q
    |||| | ||||||||||||||| | ||||||| || |||| |||| ||||||    
T  30816343 cccatatccaaacccaatcaaaacggggaaaatccatcaaattgggtttggt 30816394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 75 - 147
Target Start/End: Complemental strand, 34178396 - 34178324
Alignment:
Q  75 ggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaaccc 147  Q
    ||||||||| |||||||  ||||||||||||||||||||||||| ||||| ||| |||| |||||||||||||    
T  34178396 ggtgggtacctatatccttgttacccgtctcgtacccgtgttttgaaatcaggggaaacccatacccaaaccc 34178324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 186
Target Start/End: Original strand, 11762434 - 11762577
Alignment:
Q  43 tacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcataccca 142  Q
    |||||| | |||||||||||||||||||||| |||||  || ||||| ||||||||||||| | ||||| |||||  |||||||| |||||  | | |||    
T  11762434 tacatttgggatgggtttgggtatgagttcggggtggacacctatatacccgttacccgtcccatacccttgtttagaaatcgggaaaaacctaaatcca 11762533  T
Q  143 aacccaaacccaatcaaagcagggaaaacccgtcaacttggatt 186  Q
     | ||||||||| | |||   ||||||||||||||| |||||||    
T  11762534 tatccaaacccagtaaaaatggggaaaacccgtcaaattggatt 11762577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 38 - 133
Target Start/End: Original strand, 18908877 - 18908972
Alignment:
Q  38 ctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaac 133  Q
    ||||||||||||| |  ||||||||||||||||| | ||||||||| |||||||  |||||||||| | || |||| |||| ||||||||||||||    
T  18908877 ctttttacattcgggtagggtttgggtatgagtttggggtgggtacatatatccttgttacccgtcccatatccgtattttgaaatcggggaaaac 18908972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 55 - 162
Target Start/End: Original strand, 19367010 - 19367117
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 154  Q
    ||||||||||||| ||| |||||||| |  ||||| |  |||||||||||| ||||||||||||||||| ||||||||  |||||||| | |||||| ||    
T  19367010 gggtttgggtatgggtttgaggtgggcaactatattcatgttacccgtctcatacccgtgttttaaaattggggaaaatccatacccatatccaaactca 19367109  T
Q  155 atcaaagc 162  Q
     |||||||    
T  19367110 gtcaaagc 19367117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 85 - 228
Target Start/End: Original strand, 31496465 - 31496608
Alignment:
Q  85 tatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaacttgga 184  Q
    ||||| |||||  |||||| | ||||| |||||  | ||||||||||||||||||||| ||||||||||| ||||| | ||||||||||||||| |||      
T  31496465 tatatacccgtcccccgtcccatacccatgtttcgagatcggggaaaactcatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgag 31496564  T
Q  185 tttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    ||||||  |   || || |||| |||||| ||||||||||||||    
T  31496565 tttggtttggacgggtaaccacgggtatgggttttgttgccatg 31496608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 85 - 228
Target Start/End: Original strand, 31501851 - 31501994
Alignment:
Q  85 tatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaacttgga 184  Q
    ||||| |||||  |||||| | ||||| |||||  | ||||||||||||||||||||| ||||||||||| ||||| | ||||||||||||||| |||      
T  31501851 tatatacccgtcccccgtcccatacccatgtttcgagatcggggaaaactcatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgag 31501950  T
Q  185 tttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    ||||||  |   || || |||| |||||| ||||||||||||||    
T  31501951 tttggtttggacgggtaaccacgggtatgggttttgttgccatg 31501994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 76 - 178
Target Start/End: Original strand, 9442452 - 9442553
Alignment:
Q  76 gtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgt 175  Q
    |||||||| | ||| ||||||||||||| | |||||||||||| |||||||| ||| | |||||||| ||||||| ||| ||||| | ||||||||||||    
T  9442452 gtgggtacctctatacccgttacccgtcccatacccgtgttttgaaatcgggaaaatcccatacccatacccaaa-ccagtcaaaacggggaaaacccgt 9442550  T
Q  176 caa 178  Q
    |||    
T  9442551 caa 9442553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 46 - 160
Target Start/End: Complemental strand, 12678190 - 12678076
Alignment:
Q  46 attcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaac 145  Q
    ||||| || ||||||||||||| ||||  ||||||||| ||||| ||| ||||||||| | |||| |||| || |||||||||||||| || || || ||    
T  12678190 attcgggacgggtttgggtatgggttcagggtgggtacctatataccctttacccgtcccatacctgtgtcttgaaatcggggaaaacgcaaactcatac 12678091  T
Q  146 ccaaacccaatcaaa 160  Q
    ||||||||| |||||    
T  12678090 ccaaacccagtcaaa 12678076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 413 - 580
Target Start/End: Original strand, 16559008 - 16559177
Alignment:
Q  413 atgtgatctaacaaaacatttctttgataatgat--tgtttatgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatcct 510  Q
    ||||||||| || |||  ||||| ||||||||||  ||| ||| ||||||||||| |  | ||||||||||| ||||||||||||| ||  ||| |||||    
T  16559008 atgtgatctgacgaaatctttctgtgataatgatcatgtgtataattacccttttgccctcatgtctatattgaacacaaggcatagactgtgtcatcct 16559107  T
Q  511 tgtctagtttaatattgaacccatagacatttttgctgatatgtaagaagcgcaaattccatctaggtca 580  Q
    ||| ||||| |||||||  ||| ||||||||| | ||| ||| || || | |||||||||||| ||||||    
T  16559108 tgtttagttcaatattgggcccgtagacatttctcctgttatttaggaggggcaaattccatccaggtca 16559177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 190
Target Start/End: Original strand, 13769046 - 13769208
Alignment:
Q  26 aataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcg 125  Q
    ||||||||||||  || |||||||  || |||||||| |||| ||||  ||||||||| |||||  |||||||||||| | ||||| |||||| || |||    
T  13769046 aataaattgatt--ttctacattcaggacgggtttggatatgggttctgggtgggtacctatatgtccgttacccgtcccatacccatgttttgaagtcg 13769143  T
Q  126 gggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 190  Q
    ||||||||  | ||||| ||| ||||||| |||||||  | ||||||||| || |||| ||||||    
T  13769144 gggaaaaccgaaacccatacctaaacccagtcaaagcgagtaaaacccgtgaaattgggtttggt 13769208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 57 - 168
Target Start/End: Complemental strand, 5109016 - 5108905
Alignment:
Q  57 gtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaat 156  Q
    ||||||||||||||||| |||||||||||||||||| || |  | || | ||| | |||||| |||||||| |||||||| ||||| ||| ||||||| |    
T  5109016 gtttgggtatgagttcggggtgggtacttatatccctgtcattcatcccatacacatgttttgaaatcgggaaaaactcaaacccataccgaaacccagt 5108917  T
Q  157 caaagcagggaa 168  Q
     ||||| |||||    
T  5108916 aaaagctgggaa 5108905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 75 - 142
Target Start/End: Original strand, 14034523 - 14034590
Alignment:
Q  75 ggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcataccca 142  Q
    ||||||||| ||||| ||||||||||||||| |||  |||| |||||||||||||||||||| |||||    
T  14034523 ggtgggtacctatatacccgttacccgtctcatacttgtgtcttaaaatcggggaaaactcaaaccca 14034590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 57 - 132
Target Start/End: Complemental strand, 29199970 - 29199895
Alignment:
Q  57 gtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaa 132  Q
    ||||||||||| ||||| ||| | ||| |||||||| |||||||||| ||||||||| |||| |||||||||||||    
T  29199970 gtttgggtatgggttcggggtagatacatatatccctgttacccgtcccgtacccgtattttgaaatcggggaaaa 29199895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 55 - 160
Target Start/End: Complemental strand, 17546989 - 17546884
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 154  Q
    |||||||| |||||||||| ||||||||| | |||||||||||||  || |||| |||| || | |||||| ||||| | || ||||| |||||||||||    
T  17546989 gggtttggatatgagttcggggtgggtacatgtatccccgttaccgatcccgtatccgtattatgaaatcgaggaaaccccaaacccatacccaaaccca 17546890  T
Q  155 atcaaa 160  Q
     |||||    
T  17546889 gtcaaa 17546884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 62 - 143
Target Start/End: Original strand, 32959868 - 32959949
Alignment:
Q  62 ggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaa 143  Q
    |||||| ||||| ||||| ||| ||||||||||||||||||  |||||||||||||| ||||  |||||||| || ||||||    
T  32959868 ggtatgggttcggggtggatacctatatccccgttacccgttccgtacccgtgttttgaaattagggaaaacccaaacccaa 32959949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 131
Target Start/End: Complemental strand, 10925546 - 10925454
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaa 131  Q
    ||||||||||||  ||| |||| |||||| ||||| ||||| |||||||||| || |||||| |||||||||| |||||| ||| ||| ||||    
T  10925546 tttttacattcggaatgagtttaggtatgggttcggggtggatacttatatctccattacccatctcgtacccatgttttgaaaacggagaaa 10925454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 178
Target Start/End: Complemental strand, 20611054 - 20610946
Alignment:
Q  70 ttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaa 169  Q
    |||| ||||| ||| ||||| ||||||||||||| | ||||||| |||| |||||||||||| | || ||||| ||| ||||||| | ||| | || |||    
T  20611054 ttcggggtggatacatatattcccgttacccgtcccctacccgtattttgaaatcggggaaaccccaaacccatacctaaacccagttaaatcgggaaaa 20610955  T
Q  170 acccgtcaa 178  Q
    |||||||||    
T  20610954 acccgtcaa 20610946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 160
Target Start/End: Original strand, 14254962 - 14255063
Alignment:
Q  58 tttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatc 157  Q
    |||||||||| ||||  ||||||||| |||||  ||||||| |||| | |||||||| ||| ||||| | ||||||||| ||||| ||||||||||| ||    
T  14254962 tttgggtatgggttcatggtgggtacctatatttccgttacacgtcccatacccgtg-tttgaaatcagagaaaactcaaacccatacccaaacccagtc 14255060  T
Q  158 aaa 160  Q
    |||    
T  14255061 aaa 14255063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 162
Target Start/End: Original strand, 30624477 - 30624523
Alignment:
Q  116 tttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagc 162  Q
    |||||||||||||||||| || ||||||||||||||||| |||||||    
T  30624477 tttaaaatcggggaaaacccaaacccaaacccaaacccagtcaaagc 30624523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 159
Target Start/End: Complemental strand, 21875697 - 21875632
Alignment:
Q  94 gttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaa 159  Q
    |||| ||||| |||||||||||| |||||| || ||||||||| ||||||||| ||||||| ||||    
T  21875697 gttatccgtcccgtacccgtgttataaaattggagaaaactcaaacccaaaccaaaacccagtcaa 21875632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 132
Target Start/End: Complemental strand, 7393977 - 7393897
Alignment:
Q  52 gatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaa 132  Q
    |||| ||||| ||||| ||||| ||||| ||| ||||| ||| ||| ||||||| ||| |||||||| |||||||||||||    
T  7393977 gatgagtttgagtatgggttcggggtggatacctatatacccattatccgtctcttactcgtgttttgaaatcggggaaaa 7393897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 144
Target Start/End: Complemental strand, 34346077 - 34346003
Alignment:
Q  70 ttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaa 144  Q
    |||| ||||||||| |||||||||||||| ||   || |||||| ||||||||||||| ||||| ||||| ||||    
T  34346077 ttcggggtgggtacctatatccccgttactcgctccgaacccgtattttaaaatcgggaaaaacccatactcaaa 34346003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 86; Significance: 1e-40; HSPs: 82)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 39 - 228
Target Start/End: Original strand, 35074460 - 35074649
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || ||||||||||||| ||||| | ||||||| ||||| ||||||||||||| | |||||||||||||| |||||||||||| ||||    
T  35074460 tttttacatttgggacgggtttgggtatgggttcgggttgggtacctatatacccgttacccgtcccatacccgtgttttaagatcggggaaaacccata 35074559  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    |||| ||||||||||| ||||| | ||||||||||||| | |||| |||||| || | || || |||| |||||| ||||||||||||||    
T  35074560 cccatacccaaacccagtcaaaacggggaaaacccgtctaattgggtttggttcgggcgggtaaccacgggtatgggttttgttgccatg 35074649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 39 - 228
Target Start/End: Original strand, 16866159 - 16866348
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || ||||||||||||| ||||| ||||||||| ||||| |||||||| |||| | |||||||||||| | |||||||||||| ||||    
T  16866159 tttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttactcgtcccatacccgtgttttgagatcggggaaaacccata 16866258  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    |||| | ||||||||| ||||| | ||||||||||||||| |||| |||||| || | || || |||| | |||||||||||||||||||    
T  16866259 cccataaccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacggatatgagttttgttgccatg 16866348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 39 - 228
Target Start/End: Original strand, 30650621 - 30650810
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || || |||||||||| ||||| ||||||||| ||||| ||||||||||||| | |||||||||||| | || ||||||||||||||    
T  30650621 tttttacatttgggacggatttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgagattggggaaaactcata 30650720  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    |||| ||| ||||||| ||||| | ||||||||||||||| |||| |||||| || | || || |||| |||||||||||||||| ||||    
T  30650721 cccatacctaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacgggtatgagttttgttgacatg 30650810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 39 - 228
Target Start/End: Original strand, 10072456 - 10072645
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || || | |||||||| ||||| ||||||||| ||||| ||||||||||||  | |||||||||||| |||||||||||||| ||||    
T  10072456 tttttacatttgggacggttatgggtatgggttcggggtgggtacctatatacccgttacccgttccatacccgtgttttgaaatcggggaaaacccata 10072555  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    |||| ||||||||||| ||||| | ||||||||||||||| |||| |||||| || | || || || | |||||| ||||||||||||||    
T  10072556 cccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgggcgggtaaccgcgggtatgggttttgttgccatg 10072645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 55 - 230
Target Start/End: Original strand, 12980383 - 12980558
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 154  Q
    ||||||||||||| ||||| ||||||||||||||| ||| ||||||||| | |||||||||||| ||||||||||||||  | ||||| |||||||||||    
T  12980383 gggtttgggtatgggttcggggtgggtacttatatacccattacccgtcccatacccgtgttttgaaatcggggaaaaccaaaacccatacccaaaccca 12980482  T
Q  155 atcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatgtc 230  Q
     |||||   |||||||||||| || |||  |||||| | || || || |||| |||||||||||||||||||||||    
T  12980483 gtcaaaatggggaaaacccgttaaattgagtttggttctagcgggtaaccacgggtatgagttttgttgccatgtc 12980558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 39 - 228
Target Start/End: Complemental strand, 45885868 - 45885679
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || || ||| |||||| ||||| ||||||||| ||||| |  |||||||||| | |||||||||||| | |||||||||||||||||    
T  45885868 tttttacatttgggacggattttggtatgggttcggggtgggtacctatatacttgttacccgtcccatacccgtgttttgagatcggggaaaactcata 45885769  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    |||| ||||||||||| ||||| | | |||||||||| || |||| |||||| |||| || || |||| |||||| ||||||||||||||    
T  45885768 cccatacccaaacccagtcaaaacggagaaaacccgttaaattgggtttggttcgagcgggtaaccacgggtatgggttttgttgccatg 45885679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 39 - 228
Target Start/End: Original strand, 7779998 - 7780187
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || ||||||||||||  ||||| ||||||||| ||||| ||| ||| ||||| | |||||||||||| | |||||||||||| ||||    
T  7779998 tttttacatttgggacgggtttgggtataggttcggggtgggtacctatatacccattatccgtcccatacccgtgttttgagatcggggaaaacccata 7780097  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    |||| ||||||||||| ||||| | ||||||| ||||||| |||  |||||| ||  ||| || |||| |||||| ||||||||||||||    
T  7780098 cccatacccaaacccagtcaaaacggggaaaatccgtcaaattgagtttggttcggatgggtaaccacgggtatgggttttgttgccatg 7780187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 39 - 228
Target Start/End: Original strand, 17885455 - 17885644
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || |||| |||||||| ||||| ||| || || ||||| ||||||||||||| | ||||| ||||||||||||||||||||| ||||    
T  17885455 tttttacatttgggacgggtatgggtatgggttcggggttggaacctatatacccgttacccgtcccatacccatgttttaaaatcggggaaaacccata 17885554  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    |||| |  |||||||| ||||| | ||||||||||||||| |||| |||||| || |  | || |||| |||||| ||||||||||||||    
T  17885555 cccatattcaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgggcaggtaaccacgggtatgggttttgttgccatg 17885644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 39 - 190
Target Start/End: Complemental strand, 18125331 - 18125180
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || ||||||||||||| ||||| ||||||||| ||||| ||||||||||||| | |||||||||||  | |||||| ||||| ||||    
T  18125331 tttttacatttgggacgggtttgggtatgcgttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcgggaaaaacccata 18125232  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 190  Q
    | || || |||||||| ||||| | ||||||||||||||| |||||||||||    
T  18125231 ctcatacacaaacccagtcaaaacggggaaaacccgtcaaattggatttggt 18125180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 39 - 228
Target Start/End: Original strand, 17851844 - 17852031
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | |||||||||||||||| ||||| | ||||||| |||||  |||||||||||| | ||||||||||  || |||||||||||| ||||    
T  17851844 tttttacatttgggatgggtttgggtatgggttcgggatgggtacctatatatccgttacccgtcccatacccgtgtt--aagatcggggaaaacccata 17851941  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    |||| ||||||||||| ||||| | | ||||| || |||| |||| |||||| || | || || ||||| ||||| ||||||||||||||    
T  17851942 cccatacccaaacccagtcaaaacggagaaaatccatcaaattgggtttggttcgggcgggtaaccacaagtatgggttttgttgccatg 17852031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 43 - 228
Target Start/End: Complemental strand, 27850425 - 27850246
Alignment:
Q  43 tacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcataccca 142  Q
    |||||||| || ||||||||||||| ||||| | ||||||| ||||  ||||||||||||| | |||||||||||| |||||||||||||| ||||||||    
T  27850425 tacattcgggacgggtttgggtatgggttcgggatgggtacctatacacccgttacccgtcccatacccgtgttttgaaatcggggaaaacccataccca 27850326  T
Q  143 aacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    |||      ||||||||| | ||||||| ||||||| |||| |||||| || | || || |||| | |||||||||||||||||||    
T  27850325 aac------ccaatcaaaacggggaaaaaccgtcaaattgggtttggttcgggcgggtaaccacggatatgagttttgttgccatg 27850246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 39 - 228
Target Start/End: Original strand, 21702649 - 21702838
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || ||||| ||||||| ||||| ||||||||| ||||| ||||||||||||| | |||||||||||  | |||||||||||| ||||    
T  21702649 tttttacatttgggacgggttggggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaacccata 21702748  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    | || ||||||||||| ||||| | || |||| ||||||| |||| |||||| || | || || |||| | |||| ||||||||||||||    
T  21702749 ctcatacccaaacccagtcaaaacgggaaaaatccgtcaaattgggtttggttcgggcgggtaaccacggatatgggttttgttgccatg 21702838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 55 - 178
Target Start/End: Original strand, 27063144 - 27063267
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 154  Q
    ||||||||||||||||||| |||| |||| ||||||||||||| |||||  |||||||| |||| |||||| |||||||||| || || |||||||||||    
T  27063144 gggtttgggtatgagttcggggtgagtacatatatccccgttatccgtcctgtacccgtattttgaaatcgaggaaaactcaaactcatacccaaaccca 27063243  T
Q  155 atcaaagcagggaaaacccgtcaa 178  Q
     ||||| ||||||||| |||||||    
T  27063244 gtcaaatcagggaaaatccgtcaa 27063267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 413 - 580
Target Start/End: Complemental strand, 15153114 - 15152945
Alignment:
Q  413 atgtgatctaacaaaacatttctttgataatgat--tgtttatgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatcct 510  Q
    ||||||||| || |||| ||||| ||||||||||  ||| ||| ||||||||||| |  | ||||||||||| ||||||||||||| ||| ||| |||||    
T  15153114 atgtgatctgacgaaacctttctgtgataatgatcatgtgtataattacccttttgccctcatgtctatattgaacacaaggcatagaccgtgtcatcct 15153015  T
Q  511 tgtctagtttaatattgaacccatagacatttttgctgatatgtaagaagcgcaaattccatctaggtca 580  Q
    ||||||||| |||||||  ||| ||||||||| | ||| |||||| || | |||||||||||||||||||    
T  15153014 tgtctagttcaatattgggcccgtagacatttctcctgttatgtaggaggggcaaattccatctaggtca 15152945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 52 - 228
Target Start/End: Complemental strand, 18825962 - 18825780
Alignment:
Q  52 gatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcataccca------aac 145  Q
    |||||||||||||| | ||||| ||||||||| ||||| ||||||||||||| | |||||||||||| |||||||||||||| || |||||       ||    
T  18825962 gatgggtttgggtacgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaacccaaacccacaccctcac 18825863  T
Q  146 ccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    ||||||||| ||||| | ||||||||||||||| |||| |||||| ||   || || |||  |||||| ||||||||||||||    
T  18825862 ccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcggacggttaaccatgggtatgggttttgttgccatg 18825780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 57 - 228
Target Start/End: Original strand, 25905637 - 25905807
Alignment:
Q  57 gtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaat 156  Q
    ||||||||||||||||| ||||| ||| ||| | ||||||||||||| | |||| ||||||| | || ||||||||| |||||||| ||||||||||| |    
T  25905637 gtttgggtatgagttcggggtgg-tacctatgtacccgttacccgtcccatacctgtgttttgagattggggaaaacccatacccatacccaaacccagt 25905735  T
Q  157 caaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    ||||   ||||||||| ||||| |||| ||| || |||| || || |||| |||||| ||||||||||||||    
T  25905736 caaaaaggggaaaacctgtcaaattgggtttagttcgagcgggtaaccacgggtatgggttttgttgccatg 25905807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 39 - 190
Target Start/End: Complemental strand, 39456117 - 39455967
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || |||| || ||||| ||||| ||||||||| ||||| ||||||||||||| | ||||| |||||| |||||||||||||| ||||    
T  39456117 tttttacatttgggacgggtatgagtatg-gttcggggtgggtacctatatacccgttacccgtcccatacccatgttttgaaatcggggaaaacccata 39456019  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 190  Q
     ||| ||||||||||| ||||| | |||||||| |||||| |||| ||||||    
T  39456018 tccatacccaaacccagtcaaaacggggaaaactcgtcaaattgggtttggt 39455967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 39 - 190
Target Start/End: Original strand, 45380097 - 45380247
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || | |||| |||||| ||||| ||||||||| ||||| ||||||||||||| | ||||||| |||| |||||||| ||||| ||||    
T  45380097 tttttacatttgggacgagtttaggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtattttgaaatcgggaaaaacccata 45380196  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 190  Q
    |||| | ||||||||| ||||| ||||||||| ||||||| |||| ||||||    
T  45380197 cccatatccaaacccagtcaaaacagggaaaa-ccgtcaaattgggtttggt 45380247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 413 - 580
Target Start/End: Complemental strand, 29328455 - 29328286
Alignment:
Q  413 atgtgatctaacaaaacatttctttgataatgat--tgtttatgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatcct 510  Q
    ||||||||| || |||| ||||| ||||||||||  ||| ||| ||||||||||| |  | ||||||||||| ||||||||||||| ||| ||| |||||    
T  29328455 atgtgatctgacgaaacctttctgtgataatgatcatgtgtataattacccttttgccctcatgtctatattgaacacaaggcatagaccgtgtcatcct 29328356  T
Q  511 tgtctagtttaatattgaacccatagacatttttgctgatatgtaagaagcgcaaattccatctaggtca 580  Q
    ||||||||| |||||||  ||| ||||||||| | ||| |||||| || | |||| ||||||||||||||    
T  29328355 tgtctagttcaatattgggcccgtagacatttctcctgttatgtaggaggggcaagttccatctaggtca 29328286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 55 - 160
Target Start/End: Original strand, 22973394 - 22973499
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 154  Q
    ||||||||||||| |||||||||||||||  |||||||| ||||||||| ||||||||| |||| |||||| ||||||| || ||||| |||||||||||    
T  22973394 gggtttgggtatgggttcgaggtgggtacagatatccccattacccgtcccgtacccgtattttgaaatcgtggaaaacccaaacccatacccaaaccca 22973493  T
Q  155 atcaaa 160  Q
     |||||    
T  22973494 gtcaaa 22973499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 63 - 227
Target Start/End: Original strand, 41103670 - 41103828
Alignment:
Q  63 gtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagc 162  Q
    ||||| ||||| ||||||||||||||| ||||||| ||||| | |||||||||||| ||||||||||||      ||||| ||||| ||||| ||||| |    
T  41103670 gtatgggttcggggtgggtacttatatacccgttaaccgtcccatacccgtgttttgaaatcggggaaa------acccatacccacacccagtcaaaac 41103763  T
Q  163 agggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccat 227  Q
     || |||| ||||||| | ||||||||| || | || || |||||||||||||||||||||||||    
T  41103764 gggaaaaatccgtcaaatcggatttggttcgcgcgggtaaccacaggtatgagttttgttgccat 41103828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 61 - 228
Target Start/End: Original strand, 37218016 - 37218184
Alignment:
Q  61 gggtatgagttcgaggtgggtacttatatcccc-gttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaa 159  Q
    ||||||||||||| | | ||||||||||||||| |||||||||| |||||| ||||||| |||| ||  |||||||| || || ||||||||||| ||||    
T  37218016 gggtatgagttcgggcttggtacttatatcccccgttacccgtcccgtacctgtgttttgaaataggataaaactcaaactcatacccaaacccagtcaa 37218115  T
Q  160 agcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    | | |||||||||| |||| |||  |||||| || |||| || || | |||||||||||||||| ||||    
T  37218116 aacggggaaaacccatcaaattgagtttggttcgggtgggtatccgctggtatgagttttgttgtcatg 37218184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 37 - 160
Target Start/End: Original strand, 27063322 - 27063445
Alignment:
Q  37 tctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactca 136  Q
    ||||| |||||||| |  ||||| ||||||||||||| ||||||||| ||||| ||||||||||||| ||||||||| || | ||||||||||||||  |    
T  27063322 tctttctacattcgggtagggttggggtatgagttcggggtgggtacatatattcccgttacccgtcccgtacccgtattattaaatcggggaaaaccga 27063421  T
Q  137 tacccaaacccaaacccaatcaaa 160  Q
     ||||| ||||||||||| |||||    
T  27063422 gacccatacccaaacccagtcaaa 27063445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 39 - 190
Target Start/End: Complemental strand, 38139895 - 38139744
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || |||||||| |||| ||||| ||||||||||||||| | | ||||||||| | ||| |||||||| |||| ||||||||| ||||    
T  38139895 tttttacatttgagacgggtttggttatgggttcggggtgggtacttatatactcattacccgtcccatactcgtgttttgaaattggggaaaacccata 38139796  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 190  Q
    |||| | ||||||||| ||||| | ||||||| || |||| |||| ||||||    
T  38139795 cccatatccaaacccagtcaaaacggggaaaatccatcaaattgggtttggt 38139744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 64 - 178
Target Start/End: Complemental strand, 8906667 - 8906553
Alignment:
Q  64 tatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagca 163  Q
    |||| ||||| ||||||||| |||| ||||||||  |||||| ||| |||||||| ||||||| ||||||||| ||||| ||||||| |||||||||||     
T  8906667 tatgggttcggggtgggtacatataaccccgttattcgtctcatactcgtgttttgaaatcggagaaaactcaaacccatacccaaatccaatcaaagcg 8906568  T
Q  164 gggaaaacccgtcaa 178  Q
    | |||||||||||||    
T  8906567 gagaaaacccgtcaa 8906553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 413 - 580
Target Start/End: Original strand, 11535598 - 11535767
Alignment:
Q  413 atgtgatctaacaaaacatttctttgataatgat--tgtttatgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatcct 510  Q
    ||||||||| || |||| ||||| ||||||||||  ||| ||| ||||||||||| |  | ||||||||||| || |||||||||| ||| ||| |||||    
T  11535598 atgtgatctgacgaaacctttctgtgataatgatcatgtgtataattacccttttgccctcatgtctatattgaatacaaggcatagaccgtgtcatcct 11535697  T
Q  511 tgtctagtttaatattgaacccatagacatttttgctgatatgtaagaagcgcaaattccatctaggtca 580  Q
    ||||||||| |||||||  ||| ||||||||| | ||| |||||| || | | |||||||||||||||||    
T  11535698 tgtctagttcaatattgggcccgtagacatttctcctgttatgtaggaggggaaaattccatctaggtca 11535767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 413 - 580
Target Start/End: Original strand, 11542516 - 11542685
Alignment:
Q  413 atgtgatctaacaaaacatttctttgataatgat--tgtttatgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatcct 510  Q
    ||||||||| || |||| ||||| ||||||||||  ||| ||| |||| |||||| |  | ||||||||||| ||||||||||||| ||| ||| |||||    
T  11542516 atgtgatctgacgaaacctttctgtgataatgatcatgtgtataattatccttttgccctcatgtctatattgaacacaaggcatagaccgtgtcatcct 11542615  T
Q  511 tgtctagtttaatattgaacccatagacatttttgctgatatgtaagaagcgcaaattccatctaggtca 580  Q
    |||| |||| |||||||  ||| ||||||||| | ||| |||||| || | |||||||||||||||||||    
T  11542616 tgtcaagttcaatattgggcccgtagacatttctcctgttatgtaggaggggcaaattccatctaggtca 11542685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 413 - 580
Target Start/End: Complemental strand, 12751497 - 12751328
Alignment:
Q  413 atgtgatctaacaaaacatttctttgataatgat--tgtttatgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatcct 510  Q
    ||||||||| || |||| ||||| ||||||| ||  ||| ||| |||| |||||| |  | ||||||||||| ||||||||||||| ||| ||| |||||    
T  12751497 atgtgatctgacgaaacctttctatgataataatcatgtgtataattatccttttgccctcatgtctatattgaacacaaggcatagaccgtgtcatcct 12751398  T
Q  511 tgtctagtttaatattgaacccatagacatttttgctgatatgtaagaagcgcaaattccatctaggtca 580  Q
    ||||||||| |||||||  ||| ||||||||| | ||| |||||| || | |||||||||||||||||||    
T  12751397 tgtctagttcaatattgggcccgtagacatttctcctgttatgtaggaggggcaaattccatctaggtca 12751328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 28 - 142
Target Start/End: Complemental strand, 19440123 - 19440010
Alignment:
Q  28 taaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggg 127  Q
    |||||||||| |||||||||||| || ||||||||||||| |||||| |||||||| ||||||||| |||||| || |  ||||||||||| ||||| ||    
T  19440123 taaattgatt-tttttacattcgggacgggtttgggtatgggttcgaagtgggtacatatatccccattacccatcccaaacccgtgttttcaaatcagg 19440025  T
Q  128 gaaaactcataccca 142  Q
    ||||||||| |||||    
T  19440024 gaaaactcaaaccca 19440010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 38 - 160
Target Start/End: Original strand, 31425997 - 31426119
Alignment:
Q  38 ctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcat 137  Q
    |||| |||||||| |  ||||||||||||| ||||| ||||| ||| ||||||||||||||||||||| ||||||| |||| |||||||||||||| ||     
T  31425997 ctttctacattcgggtagggtttgggtatgcgttcggggtggatacatatatccccgttacccgtctcatacccgtatttttaaatcggggaaaacccaa 31426096  T
Q  138 acccaaacccaaacccaatcaaa 160  Q
    ||| | ||| ||||||| |||||    
T  31426097 accaataccaaaacccagtcaaa 31426119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 55 - 152
Target Start/End: Original strand, 18683980 - 18684077
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacc 152  Q
    ||||||||||||| ||||||||||| ||| |||||||| |||||||||| ||||||||| |||| |||||||||||||| |  ||||| |||||||||    
T  18683980 gggtttgggtatgggttcgaggtggatacatatatccctgttacccgtcccgtacccgtattttgaaatcggggaaaacccgaacccatacccaaacc 18684077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 28 - 222
Target Start/End: Complemental strand, 23475376 - 23475195
Alignment:
Q  28 taaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggg 127  Q
    |||||||||| |||||||||||| || ||||||||||||| |||||| |||||||| ||||||||| |||||| || |  ||||||||||| ||||||||    
T  23475376 taaattgatt-tttttacattcgggacgggtttgggtatgggttcgaagtgggtacatatatccccattacccatcccaaacccgtgttttgaaatcggg 23475278  T
Q  128 gaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgtt 222  Q
     |            ||||||||||||| ||||||| ||||||||||||||| |||  |||||| |||| || || |||| |||||| ||||||||    
T  23475277 aa------------aaacccaaacccagtcaaagcggggaaaacccgtcaaattgagtttggttcgagagggtatccacgggtatgggttttgtt 23475195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 39 - 228
Target Start/End: Original strand, 39316985 - 39317174
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || || | |||||||||||||  | ||| ||| ||||| |||| |||||||| | |||||||||||| |||||| ||||||||||||    
T  39316985 tttttacatttgagacggatatgggtatgagttcaggatggatacatatatacccgctacccgtcccatacccgtgttttgaaatcgaggaaaactcata 39317084  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    | || | ||||||||| ||||| | ||||||||||||||| |||  |||||| || | || || || |  |||||| |||||||||||||    
T  39317085 ctcatatccaaacccagtcaaaacggggaaaacccgtcaaattgagtttggttcgggcggataaccgcgagtatgaattttgttgccatg 39317174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 39 - 183
Target Start/End: Complemental strand, 27896578 - 27896434
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||| ||||| || |||| |||||||||||||| ||| ||| | |||| |||||||||||||| | ||||| |||||| ||||  |||||||| || |    
T  27896578 tttttatattcgggacgggtatgggtatgagttcggggttggtgcatataaccccgttacccgtcccatacccatgttttgaaataagggaaaacccaaa 27896479  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttgg 183  Q
    |||| |||||||||||||||||||  | ||||||| |||| ||||    
T  27896478 cccatacccaaacccaatcaaagcgagaaaaacccatcaaattgg 27896434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 62 - 190
Target Start/End: Original strand, 43507458 - 43507586
Alignment:
Q  62 ggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaag 161  Q
    |||||| ||||  ||||||| | ||||| ||||||||||||||| ||||| |||||| |||||||||||||| |||||  | ||||||||||| |||||     
T  43507458 ggtatgggttcagggtgggtgcctatatacccgttacccgtctcatacccatgttttgaaatcggggaaaacccatacttatacccaaacccagtcaaaa 43507557  T
Q  162 cagggaaaacccgtcaacttggatttggt 190  Q
    | |||||||||| |||| |||| ||||||    
T  43507558 cggggaaaacccatcaaattgggtttggt 43507586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 39 - 190
Target Start/End: Complemental strand, 3227049 - 3226898
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | |||| || || ||||| ||||| ||||||||| ||||| || |||||||||| | |||||||||||| |||||||||||||| ||||    
T  3227049 tttttacatttgggatgtgtatgagtatgggttcggggtgggtacctatattcctgttacccgtcccatacccgtgttttgaaatcggggaaaacccata 3226950  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 190  Q
    |||| || ||||| || | ||| |  |||||| ||||||| |||| ||||||    
T  3226949 cccatactcaaactcagttaaaacgaggaaaatccgtcaaattgggtttggt 3226898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 39 - 178
Target Start/End: Original strand, 38152877 - 38153015
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || |||||| |||||| ||||| ||||||||| |||||  |||||| ||||  | ||||| |||||| |||||||||||||| ||||    
T  38152877 tttttacatttgggacgggtttaggtatgggttcggggtgggtacctatatagccgttatccgttccatacccatgttttgaaatcggggaaaacccata 38152976  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaa 178  Q
    |||| ||||||||||| ||||| | ||||||| |||||||    
T  38152977 cccatacccaaacccagtcaaaac-gggaaaatccgtcaa 38153015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 107 - 190
Target Start/End: Complemental strand, 44658502 - 44658419
Alignment:
Q  107 tacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 190  Q
    |||||||||||| |||||||| |||||||||||||| ||||||||||| ||||| |  |||||||||||||| |||||||||||    
T  44658502 tacccgtgttttgaaatcgggaaaaactcatacccatacccaaacccagtcaaaacgaggaaaacccgtcaaattggatttggt 44658419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 17 - 229
Target Start/End: Original strand, 3774039 - 3774250
Alignment:
Q  17 aaaaagggcaataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgtt 116  Q
    |||| ||| ||||||||||||  || || ||||| || || |||| ||||| ||||  ||||||||| ||||||| ||||||||||||||| ||| | ||    
T  3774039 aaaaggggtaataaattgatt--ttctaaattcgggacggatttgagtatgggttcagggtgggtacctatatcctcgttacccgtctcgtgcccatttt 3774136  T
Q  117 ttaaaatcggggaaaactcataccca-aacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgag 215  Q
     |||| | |||||||||||| ||||| ||||||||| || |||||||||| |||| || |||| || | |||||| || |||| ||||| | | |||| |    
T  3774137 ataaagttggggaaaactcaaacccataacccaaactcagtcaaagcaggaaaaatccatcaaattaggtttggttcgggtggttacccgcggatatggg 3774236  T
Q  216 ttttgttgccatgt 229  Q
    || |||||||||||    
T  3774237 ttctgttgccatgt 3774250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 413 - 580
Target Start/End: Complemental strand, 18561669 - 18561500
Alignment:
Q  413 atgtgatctaacaaaacatttctttgataatgat--tgtttatgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatcct 510  Q
    ||||||||| || |||| ||||| |||||||| |  | | ||| ||||||||||| |  | ||||||||||| ||||||||||||| ||| ||| |||||    
T  18561669 atgtgatctgacgaaacttttctgtgataatgttcatatgtataattacccttttgcccttatgtctatattgaacacaaggcatagaccgtgtcatcct 18561570  T
Q  511 tgtctagtttaatattgaacccatagacatttttgctgatatgtaagaagcgcaaattccatctaggtca 580  Q
    ||||||||| |||||||  ||| ||||||||| | ||| |||||| || | ||||||||| |||||||||    
T  18561569 tgtctagttcaatattgggcccgtagacatttcttctgttatgtaggaggggcaaattccctctaggtca 18561500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 55 - 133
Target Start/End: Original strand, 21750788 - 21750866
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaac 133  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||| || |||| |||| |||||||| |||||    
T  21750788 gggtttgggtatgagttcgaggtgggtacatatatccccgtcacccgtctcatatccgtattttgaaatcgggaaaaac 21750866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 63 - 228
Target Start/End: Complemental strand, 44734436 - 44734273
Alignment:
Q  63 gtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagc 162  Q
    ||||| ||||| ||||||||| ||||| ||| ||||| ||| | |||||||||||| |||||| | ||||| ||||| ||  |||||||||| |||||      
T  44734436 gtatgggttcggggtgggtacctatatacccattaccggtcccatacccgtgttttgaaatcgagaaaaacacatacacattcccaaacccagtcaaa-- 44734339  T
Q  163 agggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    |||||||||||||||| |||| |||||| || | || || || |  ||||||||||||||||||||    
T  44734338 agggaaaacccgtcaaattgggtttggttcgggcgggtaaccgcgagtatgagttttgttgccatg 44734273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 39 - 154
Target Start/End: Complemental strand, 2630676 - 2630562
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    ||||| |||||| || ||||||||||||| ||||| ||||||||  ||||| ||||| ||||||| | ||||| |||||| |||||||||||||| || |    
T  2630676 tttttgcattcgggacgggtttgggtatgggttcggggtgggtatctatatacccgtcacccgtcccatacccatgtttt-aaatcggggaaaacccaaa 2630578  T
Q  139 cccaaacccaaaccca 154  Q
    |||| |||||||||||    
T  2630577 cccatacccaaaccca 2630562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 417 - 580
Target Start/End: Complemental strand, 12739201 - 12739038
Alignment:
Q  417 gatctaacaaaacatttctttgataatgat--tgtttatgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatccttgtc 514  Q
    ||||| || |||| ||||| ||||||||||  ||| ||| |||||||||||||  |   ||||||||| ||||||||||||| ||| ||| |||||||||    
T  12739201 gatctgacgaaacctttctgtgataatgatcatgtgtataattaccctttttccctc--gtctatattgaacacaaggcatagaccgtgtcatccttgtc 12739104  T
Q  515 tagtttaatattgaacccatagacatttttgctgatatgtaagaagcgcaaattccatctaggtca 580  Q
    ||||| |||||||  ||| ||||||||| | ||| |||||| || |  ||||||||||||||||||    
T  12739103 tagttcaatattggtcccgtagacatttctcctgttatgtaggagggccaaattccatctaggtca 12739038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 77 - 228
Target Start/End: Original strand, 24753192 - 24753342
Alignment:
Q  77 tgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtc 176  Q
    ||||||| ||||| ||||||||||||| | |||||||||||| | ||| |||||||| |||||||| | ||||||||| ||||| | | ||||| |||||    
T  24753192 tgggtacctatatacccgttacccgtcccatacccgtgttttgagatc-gggaaaacccatacccatatccaaacccagtcaaaacggagaaaatccgtc 24753290  T
Q  177 aacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    || ||| ||||||| ||   || || |||| |||||| ||||||||||||||    
T  24753291 aaattgaatttggttcggacgggtaaccacgggtatgggttttgttgccatg 24753342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 39 - 178
Target Start/End: Original strand, 37182265 - 37182403
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || |||| |||||||| ||||| | || |||| ||||| |||| |||||||| | |||||||||||| || |||| |||||| ||||    
T  37182265 tttttacatttgggacgggtatgggtatgggttcg-gatgagtacctatatacccgctacccgtcccatacccgtgttttgaattcggagaaaacccata 37182363  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaa 178  Q
    | || ||||||||||| ||||| | |||||||||||||||    
T  37182364 ctcatacccaaacccagtcaaaacggggaaaacccgtcaa 37182403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 77 - 160
Target Start/End: Complemental strand, 42908106 - 42908023
Alignment:
Q  77 tgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaa 160  Q
    ||||||| ||||||||| ||||||||| ||||||||| |||| |||||||||||||| || || || |||||||||||||||||    
T  42908106 tgggtacatatatccccattacccgtcccgtacccgtattttgaaatcggggaaaacccaaactcatacccaaacccaatcaaa 42908023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 55 - 172
Target Start/End: Original strand, 3157089 - 3157206
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 154  Q
    ||||||||||||  |||||  |||||||| ||||||||||||| ||||| | ||||| | |||| ||||||||||||||  | ||||| ||||||||| |    
T  3157089 gggtttgggtataggttcggtgtgggtacctatatccccgttatccgtcccatacccatattttgaaatcggggaaaacctaaacccatacccaaaccaa 3157188  T
Q  155 atcaaagcagggaaaacc 172  Q
     ||||||| |||||||||    
T  3157189 gtcaaagcggggaaaacc 3157206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 55 - 132
Target Start/End: Original strand, 32546198 - 32546275
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaa 132  Q
    ||||||||||||| ||||| ||||||||| ||||||||||||||||||  ||||||||| |||| |||||||| ||||    
T  32546198 gggtttgggtatgggttcggggtgggtacatatatccccgttacccgttccgtacccgtattttgaaatcgggaaaaa 32546275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 55 - 148
Target Start/End: Complemental strand, 45708952 - 45708859
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaaccca 148  Q
    |||||| |||||||||||| ||||||||| ||||| |||||||||||||   |||||||||||| | ||||| |||||| |||||| |||||||    
T  45708952 gggtttaggtatgagttcggggtgggtacctatatacccgttacccgtccaatacccgtgttttgagatcggagaaaacccataccaaaaccca 45708859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 58 - 190
Target Start/End: Original strand, 5377094 - 5377226
Alignment:
Q  58 tttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatc 157  Q
    |||||||||| ||||| ||||||||| ||||| ||| ||||||||| | |||| ||||||| |||||||||||||| || || || || ||| |||||||    
T  5377094 tttgggtatgggttcggggtgggtacctatataccctttacccgtcccatacctgtgttttgaaatcggggaaaacccaaactcatactcaaccccaatc 5377193  T
Q  158 aaagcagggaaaacccgtcaacttggatttggt 190  Q
    ||| | || |||| |||| || || ||||||||    
T  5377194 aaaacgggaaaaatccgttaaattagatttggt 5377226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 58 - 138
Target Start/End: Complemental strand, 25980001 - 25979921
Alignment:
Q  58 tttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||||||| | ||||||||| |||||  |||||||||||||| |||| ||||||| |||||||||||||| ||||    
T  25980001 tttgggtatgagtttggggtgggtacatatatatccgttacccgtctcatacctgtgttttgaaatcggggaaaacccata 25979921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 142
Target Start/End: Complemental strand, 23533716 - 23533604
Alignment:
Q  28 taaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggg 127  Q
    |||||||||| |||||||||||| || | ||||||||||| |||||| |||||||| ||||| ||| |||||| || | ||||||| |||| ||||||||    
T  23533716 taaattgatt-tttttacattcgggacgagtttgggtatgggttcgaagtgggtacatatat-cccattacccatcgcatacccgtattttcaaatcggg 23533619  T
Q  128 gaaaactcataccca 142  Q
    |||||| || |||||    
T  23533618 gaaaacccaaaccca 23533604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 57 - 142
Target Start/End: Original strand, 26622959 - 26623044
Alignment:
Q  57 gtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcataccca 142  Q
    ||||||||||| ||||| ||||||||||||||| ||| |||||| || | |||||||||||| ||||| |||||||| || |||||    
T  26622959 gtttgggtatgggttcggggtgggtacttatatacccattacccatcccatacccgtgttttgaaatcagggaaaacccaaaccca 26623044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 75 - 228
Target Start/End: Complemental strand, 41741517 - 41741364
Alignment:
Q  75 ggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccg 174  Q
    ||||||||| || || ||||||| ||||||| |||||||||||| |||||||||||||| ||||| || ||||||| ||| | |||   |||||||| |     
T  41741517 ggtgggtacctacatacccgttatccgtctcatacccgtgttttgaaatcggggaaaacccatactcatacccaaatccagtaaaaatggggaaaactca 41741418  T
Q  175 tcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    |||| |||| |||||| || | || || || ||  |||| ||||||||||||||    
T  41741417 tcaaattgggtttggttcgggcgggtaaccgcaaatatgggttttgttgccatg 41741364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 55 - 160
Target Start/End: Original strand, 43218289 - 43218394
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 154  Q
    ||||||||||||||||||| |||| |||| |||||| |||||||||||| || |||  | || | |||| ||||||||| || ||||| |||||||||||    
T  43218289 gggtttgggtatgagttcggggtgagtacatatatcgccgttacccgtcccgcacctatattatgaaattggggaaaacccaaacccatacccaaaccca 43218388  T
Q  155 atcaaa 160  Q
     |||||    
T  43218389 gtcaaa 43218394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 146 - 222
Target Start/End: Original strand, 23457156 - 23457232
Alignment:
Q  146 ccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgtt 222  Q
    ||||||||| ||||||| ||||||||||||||| |||| |||||| |||| || ||||| | |||||||||||||||    
T  23457156 ccaaacccagtcaaagcggggaaaacccgtcaaattgggtttggttcgagagggtacccgcgggtatgagttttgtt 23457232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 45 - 133
Target Start/End: Complemental strand, 25783004 - 25782916
Alignment:
Q  45 cattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaac 133  Q
    |||||| || || ||| |||||||||||| ||||||||| ||||| ||| ||| ||||||| ||||||||||||| |||||| ||||||    
T  25783004 cattcgggacggattttggtatgagttcggggtgggtacctatatacccattatccgtctcatacccgtgttttataatcggagaaaac 25782916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 80 - 148
Target Start/End: Original strand, 29292735 - 29292803
Alignment:
Q  80 gtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaaccca 148  Q
    |||| |||||||  ||||||| ||||||||||||||||| |||||||||||||  ||||||||||||||    
T  29292735 gtacctatatccatgttacccatctcgtacccgtgttttgaaatcggggaaaatccatacccaaaccca 29292803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 56 - 160
Target Start/End: Complemental strand, 30839220 - 30839116
Alignment:
Q  56 ggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaa 155  Q
    |||||||| ||||||||| ||| | ||| ||||||| |||||| |||| | ||||||| |||| ||||| ||||||||||| || || |||||||||||     
T  30839220 ggtttgggcatgagttcggggtagatacatatatccacgttactcgtcccatacccgtattttgaaatcagggaaaactcaaactcatacccaaacccag 30839121  T
Q  156 tcaaa 160  Q
    |||||    
T  30839120 tcaaa 30839116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 55 - 143
Target Start/End: Complemental strand, 43550503 - 43550416
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaa 143  Q
    ||||||| ||||||||||| |||| |||| ||||||||  ||||| |||||||| | ||||||||||| ||||||||||||| ||||||    
T  43550503 gggtttgtgtatgagttcg-ggtgagtacatatatccctattaccagtctcgtatctgtgttttaaaaacggggaaaactcaaacccaa 43550416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 107 - 178
Target Start/End: Complemental strand, 37196044 - 37195973
Alignment:
Q  107 tacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaa 178  Q
    |||| ||||||| |||||||||||||  |||||||| ||||||||| ||||||| ||||||||| |||||||    
T  37196044 tacctgtgttttgaaatcggggaaaatccatacccatacccaaacctaatcaaaacagggaaaatccgtcaa 37195973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 28309498 - 28309572
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcgggga 129  Q
    ||||||||||||||||||| ||| | ||| ||||| ||||||||||||| ||||||||| |||| ||||| ||||    
T  28309498 gggtttgggtatgagttcggggtagatacatatattcccgttacccgtcccgtacccgtattttgaaatcaggga 28309572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 142
Target Start/End: Original strand, 3920547 - 3920631
Alignment:
Q  58 tttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcataccca 142  Q
    |||||||||| ||||| ||||||||| ||||| || |||| ||||| | |||| ||||||| |||||||||||||| || |||||    
T  3920547 tttgggtatgggttcggggtgggtacctatatacctgttatccgtcccataccagtgttttgaaatcggggaaaacccaaaccca 3920631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 136
Target Start/End: Original strand, 5022603 - 5022683
Alignment:
Q  56 ggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactca 136  Q
    |||||| |||||| |||||||||||||||||||||||   ||||  |||| ||||||| |||| |||| ||||||||||||    
T  5022603 ggtttgagtatgaattcgaggtgggtacttatatccctactacctatctcatacccgtattttgaaattggggaaaactca 5022683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 178
Target Start/End: Original strand, 33841071 - 33841206
Alignment:
Q  42 ttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcataccc 141  Q
    ||||||| | || |||| || ||||| ||||| |||| |||| |||| ||  |||||||||| | |||||||||||| ||||||||||||||||| |  |    
T  33841071 ttacatttgggacgggtatgagtatgggttcggggtgagtacatataaccatgttacccgtcccatacccgtgttttgaaatcggggaaaactcaaattc 33841170  T
Q  142 aaacccaaacccaatcaaagcagggaaaacccgtcaa 178  Q
    | || |||| ||| ||||||| || ||||||||||||    
T  33841171 atactcaaa-ccagtcaaagcgggaaaaacccgtcaa 33841206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 91 - 166
Target Start/End: Original strand, 2472025 - 2472100
Alignment:
Q  91 cccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcaggg 166  Q
    |||||||||||||| |||||||| || | |||||||  |||||||| || || ||||||||||||||||| |||||    
T  2472025 cccgttacccgtctagtacccgtattatgaaatcggaaaaaactcaaactcatacccaaacccaatcaaatcaggg 2472100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 39 - 178
Target Start/End: Complemental strand, 5565410 - 5565271
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | |||| || |||||||| ||| | ||||||||| |||| ||||||||||| || | || ||||  ||| ||||| |||||||| || |    
T  5565410 tttttacatttgggatgtgtatgggtatgggttaggggtgggtacatataaccccgttacccatcccatatccgtactttgaaatcagggaaaacccaaa 5565311  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaa 178  Q
    || | | ||||| ||| ||||||| ||||||| |||||||    
T  5565310 cctataaccaaatccagtcaaagcggggaaaatccgtcaa 5565271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 85 - 160
Target Start/End: Complemental strand, 29015009 - 29014934
Alignment:
Q  85 tatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaa 160  Q
    |||||||||| || ||||| ||||||||| |||| |||||||| |||||||| || || ||| |||||||||||||    
T  29015009 tatatccccgctatccgtcccgtacccgtattttgaaatcgggaaaaactcaaactcatacctaaacccaatcaaa 29014934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 133
Target Start/End: Complemental strand, 10995921 - 10995843
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaac 133  Q
    |||| |||||||| ||||| ||||||||  |||| ||| |||||||||| | ||||||||| || ||||||||||||||    
T  10995921 gggtatgggtatgggttcggggtgggtatatataaccctgttacccgtcccatacccgtgtcttgaaatcggggaaaac 10995843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 160
Target Start/End: Complemental strand, 44845239 - 44845117
Alignment:
Q  38 ctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcat 137  Q
    |||| |||||||| |  ||||||| ||||| ||||| ||||||||  ||||||| | ||| ||||| ||||||||| || | |||||||||||||| ||     
T  44845239 ctttctacattcgggcagggtttgtgtatgggttcggggtgggtaaatatatcctcattaaccgtcccgtacccgtattatgaaatcggggaaaacccaa 44845140  T
Q  138 acccaaacccaaacccaatcaaa 160  Q
    ||||| ||| |||| || |||||    
T  44845139 acccataccaaaactcagtcaaa 44845117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 132
Target Start/End: Original strand, 16811720 - 16811812
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaa 132  Q
    |||||||||| | || || |||||||||| ||||| ||||||||  ||||| ||| ||| ||||||| |||||||||||| | |||||||||||    
T  16811720 tttttacatttgggacggctttgggtatgggttcg-ggtgggtatctatatacccattatccgtctcatacccgtgttttgagatcggggaaaa 16811812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 224
Target Start/End: Complemental strand, 44985952 - 44985836
Alignment:
Q  107 tacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccac 206  Q
    ||||||||||| ||| |||| |||||| |||| ||| ||||||||||||||||| | | ||||| ||||||| || |||||||| ||  ||| || || |    
T  44985952 tacccgtgtttgaaa-tcggagaaaacccatatccatacccaaacccaatcaaaacggagaaaatccgtcaaattagatttggttcggatgggtaaccgc 44985854  T
Q  207 aggtatgagttttgttgc 224  Q
      ||||||||||||||||    
T  44985853 gagtatgagttttgttgc 44985836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 126
Target Start/End: Complemental strand, 6557840 - 6557741
Alignment:
Q  26 aataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcg 125  Q
    |||||| ||||| |||||| ||||| || || |||||||||| |||| ||| | || ||||||||  | |||| ||||||||||||||||||| ||||||    
T  6557840 aataaactgattttttttatattcgagacggatttgggtatgcgttc-aggagagttcttatatcttcattactcgtctcgtacccgtgtttttaaatcg 6557742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 143
Target Start/End: Original strand, 24425406 - 24425474
Alignment:
Q  75 ggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaa 143  Q
    ||||||||| ||||| ||||||||||||| | |||||||||||| ||||| | ||||| ||| ||||||    
T  24425406 ggtgggtacctatatacccgttacccgtcccatacccgtgttttgaaatcagagaaaattcaaacccaa 24425474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 190
Target Start/End: Complemental strand, 37103231 - 37103079
Alignment:
Q  38 ctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcat 137  Q
    |||| |||||||| |  |||||||| |||| ||||| | ||||| | ||||||| |||||||| || ||||||||| |||| ||||| || ||||| ||     
T  37103231 ctttctacattcgggtagggtttggatatgtgttcgggatgggtgcatatatcctcgttacccttcccgtacccgtattttgaaatcaggaaaaacacaa 37103132  T
Q  138 acccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 190  Q
    ||  | | ||||||||||||||| | | ||| | ||||||| ||||| |||||    
T  37103131 acttatatccaaacccaatcaaatcggagaagatccgtcaaattggagttggt 37103079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 222
Target Start/End: Complemental strand, 19440017 - 19439942
Alignment:
Q  147 caaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgtt 222  Q
    |||||||| ||||||| ||||||||||||||| |||| |||||| |||| || ||||| | ||||||  |||||||    
T  19440017 caaacccagtcaaagcggggaaaacccgtcaaattgggtttggttcgagagggtacccgcgggtatggtttttgtt 19439942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 118
Target Start/End: Complemental strand, 44794130 - 44794052
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgtttt 118  Q
    |||||||||| | ||  |||||||||||| ||||| ||||||||| | ||| | ||||||||||||| ||||||||||||    
T  44794130 tttttacatttgggacaggtttgggtatgggttcggggtgggtacct-tatactcgttacccgtctcatacccgtgtttt 44794052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 132
Target Start/End: Complemental strand, 10990941 - 10990871
Alignment:
Q  62 ggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaa 132  Q
    ||||||| |||  ||||| ||| ||||||||  ||||||||| ||||||||| |||| |||||||||||||    
T  10990941 ggtatgaattcagggtggatacctatatccctattacccgtcccgtacccgtattttgaaatcggggaaaa 10990871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 228
Target Start/End: Complemental strand, 26004486 - 26004400
Alignment:
Q  142 aaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    ||||||||||||| ||||| | || ||||||| |||| |||  |||||| || | || || |||| |||||||||||||||||||||    
T  26004486 aaacccaaacccagtcaaaacgggaaaaacccatcaaattgtgtttggttcgggcgggtaaccacgggtatgagttttgttgccatg 26004400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 178
Target Start/End: Original strand, 29157355 - 29157480
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgtttta--aaatcggggaaaactcatacccaaacccaaacc 152  Q
    ||||||||||| | |||   ||||| ||| ||||||||||||||||||||| ||||||| | |||  |||||||||||||  || | ||| |||||||||    
T  29157355 gggtttgggtacgggtttagggtggatacatatatccccgttacccgtctcatacccgtatattatgaaatcggggaaaatccaaaaccatacccaaacc 29157454  T
Q  153 caatcaaagcagggaaaacccgtcaa 178  Q
    |  |||||   | |||||||||||||    
T  29157455 ctgtcaaattggtgaaaacccgtcaa 29157480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 228
Target Start/End: Complemental strand, 44785278 - 44785172
Alignment:
Q  122 atcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgt 221  Q
    ||||| |||||| |||||||| ||||||||  | ||||| | |||||||| |||||| |||| |||| | || | || || ||||| |||||| ||||||    
T  44785278 atcggagaaaacccatacccatacccaaacttagtcaaaacggggaaaactcgtcaaattgggtttgattcgggcgggtaaccacatgtatgaattttgt 44785179  T
Q  222 tgccatg 228  Q
    |||||||    
T  44785178 tgccatg 44785172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 82; Significance: 3e-38; HSPs: 91)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 39 - 228
Target Start/End: Complemental strand, 6382376 - 6382187
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || ||||||||||||| ||||| ||||||||| ||||| ||||||||||||| | |||||||||||| | ||||| |||||| ||||    
T  6382376 tttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgagatcggagaaaacccata 6382277  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    |||| ||||||||||| ||||||| ||||||||||||||| |||| |||| | || | || || |||| |||||| ||||| ||||||||    
T  6382276 cccatacccaaacccagtcaaagcggggaaaacccgtcaaattgggtttgattcgggcgggtaaccacgggtatgggttttattgccatg 6382187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 39 - 228
Target Start/End: Original strand, 11028064 - 11028253
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | ||  |||||||||||||||||| ||||||||| ||||| ||||||||||||| | |||||||||||| | |||||||||||| ||||    
T  11028064 tttttacatttgggacaggtttgggtatgagttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccata 11028163  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    |||| ||||||| ||| ||||| | | ||||||||||||| |||| |||||| || |||| || ||||  ||||| ||||||||||||||    
T  11028164 cccatacccaaatccagtcaaaacggagaaaacccgtcaaattgggtttggttcgggtgggtaaccacgtgtatgggttttgttgccatg 11028253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 39 - 230
Target Start/End: Original strand, 7608961 - 7609152
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || ||||||||||||| ||||| ||||||||| ||||| ||||||||||||| | |||||||||||  | |||||||||||| ||||    
T  7608961 tttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaacccata 7609060  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatgtc 230  Q
    |||| ||||||| ||| ||||| | ||||||||||||||| |||| ||| || || |||| || ||||  ||||| ||||||||||||||||    
T  7609061 cccatacccaaatccagtcaaaacggggaaaacccgtcaaattgggtttagttcgggtgggtaaccacgagtatgggttttgttgccatgtc 7609152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 39 - 228
Target Start/End: Original strand, 21423852 - 21424041
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || ||||||| ||||| ||| | ||||||||| ||||| ||||||||||||||| |||||||||||  | || ||||||||| ||||    
T  21423852 tttttacatttgggacgggtttgtgtatgggtttggggtgggtacctatatacccgttacccgtctcatacccgtgtttcgagattggggaaaacccata 21423951  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    |||| ||||||||||| ||||| | || |||| ||||||| ||||||||||| || | || || |||| |||||||||||| ||||||||    
T  21423952 cccatacccaaacccagtcaaaacgggaaaaatccgtcaaattggatttggttcgggcgggtaaccacgggtatgagttttattgccatg 21424041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 55 - 190
Target Start/End: Complemental strand, 15987350 - 15987215
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 154  Q
    ||||||||||||| ||||| ||||||||  ||||| |||||||||| || | |||||||||||||||||| ||||||||||||||||| |||||||||||    
T  15987350 gggtttgggtatgggttcggggtgggtatctatatacccgttacccatcccatacccgtgttttaaaatctgggaaaactcatacccatacccaaaccca 15987251  T
Q  155 atcaaagcagggaaaacccgtcaacttggatttggt 190  Q
    ||||||   | ||||||||||||| |||| ||||||    
T  15987250 atcaaaatggagaaaacccgtcaaattgggtttggt 15987215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 39 - 225
Target Start/End: Original strand, 44317526 - 44317712
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || ||||||||||||| ||||| ||||||||| ||||| ||||||||||||| | |||||||||||  | |||||||||||| ||||    
T  44317526 tttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaacccata 44317625  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgcc 225  Q
    |||| ||||||||||| ||||| | ||||||| ||||||| |||| |||| | || | |  || |||| |||||| |||||||||||    
T  44317626 cccatacccaaacccagtcaaaacggggaaaatccgtcaaattgggtttgattcgggcgagtaaccacgggtatgggttttgttgcc 44317712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 55 - 228
Target Start/End: Original strand, 26564838 - 26565011
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 154  Q
    |||||||||||||  |||| ||||||||| ||||| ||||||||||||| | |||||| ||||| |||||||||||| |||| || || |||||||||||    
T  26564838 gggtttgggtatggtttcggggtgggtacctatatacccgttacccgtcccatacccgcgttttgaaatcggggaaagctcaaactcatacccaaaccca 26564937  T
Q  155 atcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
     ||||| |   ||||| ||||||| ||||||||||| || |||| || |||| |||||| ||||||||||||||    
T  26564938 gtcaaaacgaagaaaatccgtcaaattggatttggttcgggtgggtaaccacgggtatgggttttgttgccatg 26565011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 39 - 228
Target Start/End: Original strand, 43893219 - 43893407
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || |||||||||||||| |||| ||||| ||| ||||| ||||||||||||| | |||||||||||  | ||||||| |||| ||||    
T  43893219 tttttacatttgggacgggtttgggtatgaattcggggtggatacctatatacccgttacccgtcccatacccgtgtttcgagatcgggg-aaacccata 43893317  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    |||| ||||||||||| ||||| | ||||||||||||||| |||| |||||  || | || || |||| |||||| ||||||||||||||    
T  43893318 cccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggctcgggcgggtaaccacgggtatgggttttgttgccatg 43893407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 39 - 228
Target Start/End: Complemental strand, 55826727 - 55826538
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || |||||||| |||| ||||| ||||||||| ||||| ||||||||||||| | |||| ||||||  | |||||||||||| ||||    
T  55826727 tttttacatttgggacgggtttggatatgggttcggggtgggtacctatatacccgttacccgtcccatacctgtgtttcgagatcggggaaaacccata 55826628  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    | || | ||||||||| ||||| ||||||||| ||||||| ||||||||||| ||   || || |||| |||||| ||||||||||||||    
T  55826627 ctcatatccaaacccagtcaaaacagggaaaatccgtcaaattggatttggttcggacgggtaaccacgggtatgggttttgttgccatg 55826538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 55 - 230
Target Start/End: Complemental strand, 6482123 - 6481948
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 154  Q
    ||||||||||||| ||||| ||||||||| ||||| ||| |||| |||| | |||||||||||| |||| ||||||||| || ||||| |||||||||||    
T  6482123 gggtttgggtatgggttcggggtgggtacatatataccctttactcgtcccatacccgtgtttttaaattggggaaaacccaaacccatacccaaaccca 6482024  T
Q  155 atcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatgtc 230  Q
    |||||| ||| ||||| ||||||| |||  |||| | || |||| || |||| |||||  ||||||||||||||||    
T  6482023 atcaaaacagagaaaatccgtcaaattgagtttgattcgggtggataaccacgggtataggttttgttgccatgtc 6481948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 43 - 149
Target Start/End: Original strand, 19534450 - 19534556
Alignment:
Q  43 tacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcataccca 142  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||| || |||||||||| | |||||   |||||||||||| |||||||||||||||    
T  19534450 tacattcgtgacgggtttgggtatgagttcgaggtgggtacctatatacctgttacccgtcccatacccagattttaaaatcggagaaaactcataccca 19534549  T
Q  143 aacccaa 149  Q
    |||||||    
T  19534550 aacccaa 19534556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 55 - 228
Target Start/End: Complemental strand, 8843892 - 8843720
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 154  Q
    ||||||||||||||||||| ||||||||  |||||||||| |||||||| || ||| |||||||||||||||| |||| ||| || || | |||||||||    
T  8843892 gggtttgggtatgagttcg-ggtgggtatctatatccccgctacccgtcccgcacctgtgttttaaaatcgggaaaaattcaaacacatatccaaaccca 8843794  T
Q  155 atcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
     |||||||| |||||||||||||| ||  ||||||| ||  ||  ||||| || ||||||||||||||| ||||    
T  8843793 gtcaaagcacggaaaacccgtcaaatttaatttggttcggatgaatacccgcatgtatgagttttgttgtcatg 8843720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 55 - 228
Target Start/End: Complemental strand, 8856856 - 8856684
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 154  Q
    ||||||||||||||||||| ||||||||  |||||||||| |||||||| || ||| |||||||||||||||| |||| ||| || || | |||||||||    
T  8856856 gggtttgggtatgagttcg-ggtgggtatctatatccccgctacccgtcccgcacctgtgttttaaaatcgggaaaaattcaaacacatatccaaaccca 8856758  T
Q  155 atcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
     |||||||| |||||||||||||| ||  ||||||| ||  ||  ||||| || ||||||||||||||| ||||    
T  8856757 gtcaaagcacggaaaacccgtcaaatttaatttggttcggatgaatacccgcatgtatgagttttgttgtcatg 8856684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 39 - 188
Target Start/End: Original strand, 31752447 - 31752596
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || |||| |||||||| ||||| |||||| || ||||| | |||||| |||||| |||||||||||| |||||||||||||| ||||    
T  31752447 tttttacatttgggacgggtatgggtatgggttcggggtgggaacctatatactcgttactcgtctcatacccgtgttttgaaatcggggaaaacccata 31752546  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttg 188  Q
    |||| | ||||||||||||||| | |  |||||||||||| |||||||||    
T  31752547 cccatatccaaacccaatcaaaacggtaaaaacccgtcaaattggatttg 31752596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 39 - 228
Target Start/End: Complemental strand, 47550457 - 47550268
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || ||||||||||||| ||||| ||||||||| ||||| || |||||||||| | |||||||||||| | |||||||||||||||||    
T  47550457 tttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacctgttacccgtcccatacccgtgttttgagatcggggaaaactcata 47550358  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    || | ||||||||||| |||||   ||||||| ||| ||| |||  |||||| || | || || ||||| ||||| |||||||| |||||    
T  47550357 cctatacccaaacccagtcaaaatggggaaaatccgccaaattgagtttggttcgggcgggtaaccacatgtatgggttttgtttccatg 47550268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 43 - 190
Target Start/End: Complemental strand, 19883156 - 19883009
Alignment:
Q  43 tacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcataccca 142  Q
    |||||||| || | ||||| ||||  ||||| ||||| ||| |||||||||||||||| || |||| |||||||||||||||||||||||| || || ||    
T  19883156 tacattcgggacgagtttgtgtatcggttcggggtggatacctatatccccgttacccttcccgtatccgtgttttaaaatcggggaaaacccaaactca 19883057  T
Q  143 aacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 190  Q
     || |||||||||||||||| || |||||||||||| |||| ||||||    
T  19883056 tactcaaacccaatcaaagcgggaaaaacccgtcaaattgggtttggt 19883009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 413 - 580
Target Start/End: Complemental strand, 8858838 - 8858669
Alignment:
Q  413 atgtgatctaacaaaacatttctttgataatgat--tgtttatgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatcct 510  Q
    ||||||||| || |||| ||||| ||||||||||  ||| ||| ||||||||||| |  | ||||||||||| ||||||||||||| ||| ||| |||||    
T  8858838 atgtgatctgacgaaacctttctgtgataatgatcatgtgtataattacccttttgccctcatgtctatattgaacacaaggcatagaccgtgtcatcct 8858739  T
Q  511 tgtctagtttaatattgaacccatagacatttttgctgatatgtaagaagcgcaaattccatctaggtca 580  Q
    ||||||||| |||||||  ||| ||||||||| | ||| |||||| || | |||||||||||||||||||    
T  8858738 tgtctagttcaatattgggcccgtagacatttctcctgttatgtaggaggggcaaattccatctaggtca 8858669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 413 - 580
Target Start/End: Complemental strand, 18262883 - 18262714
Alignment:
Q  413 atgtgatctaacaaaacatttctttgataatgat--tgtttatgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatcct 510  Q
    ||||||||| || |||| ||||| ||||||||||  ||| ||| ||||||||||| |  | ||||||||||| ||||||||||||| ||| ||| |||||    
T  18262883 atgtgatctgacgaaacctttctgtgataatgatcatgtgtataattacccttttgccctcatgtctatattgaacacaaggcatagaccgtgtcatcct 18262784  T
Q  511 tgtctagtttaatattgaacccatagacatttttgctgatatgtaagaagcgcaaattccatctaggtca 580  Q
    ||||||||| |||||||  ||| ||||||||| | ||| |||||| || | |||||||||||||||||||    
T  18262783 tgtctagttcaatattgggcccgtagacatttctcctgttatgtaggaggggcaaattccatctaggtca 18262714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 413 - 580
Target Start/End: Complemental strand, 55613354 - 55613185
Alignment:
Q  413 atgtgatctaacaaaacatttctttgataatgat--tgtttatgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatcct 510  Q
    ||||||||| || |||| ||||| ||||||||||  ||| ||| ||||||||||| |  | ||||||||||| ||||||||||||| ||| ||| |||||    
T  55613354 atgtgatctgacgaaacctttctgtgataatgatcatgtgtataattacccttttgccctcatgtctatattgaacacaaggcatagaccgtgtcatcct 55613255  T
Q  511 tgtctagtttaatattgaacccatagacatttttgctgatatgtaagaagcgcaaattccatctaggtca 580  Q
    ||||||||| |||||||  ||| ||||||||| | ||| |||||| || | |||||||||||||||||||    
T  55613254 tgtctagttcaatattgggcccgtagacatttctcctgttatgtaggaggggcaaattccatctaggtca 55613185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 39 - 228
Target Start/End: Complemental strand, 11122973 - 11122784
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || ||||||| ||||| ||||| ||||||||| ||||| ||||||||||||| | |||||||||||  | ||||| |||||| ||||    
T  11122973 tttttacatttgggacgggtttgagtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggagaaaacccata 11122874  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    |||| |||||||| || ||||| | |  |||| ||||||| |||  |||||| || | || || |||| |||||||||||||||||||||    
T  11122873 cccatacccaaactcagtcaaaacggaaaaaatccgtcaaattgagtttggttcgggcgggtaaccacgggtatgagttttgttgccatg 11122784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 55 - 172
Target Start/End: Complemental strand, 15733614 - 15733497
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 154  Q
    ||||||| ||| ||||||| ||||||||| |||||| |||||||||||||||||||||| |||| |||||| |||||||||||| ||| ||||||||| |    
T  15733614 gggtttgagtacgagttcggggtgggtacatatatctccgttacccgtctcgtacccgtattttgaaatcgaggaaaactcatatccatacccaaaccta 15733515  T
Q  155 atcaaagcagggaaaacc 172  Q
    || ||| | |||||||||    
T  15733514 ataaaatcggggaaaacc 15733497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 39 - 228
Target Start/End: Complemental strand, 31918662 - 31918473
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || ||||||||||||| ||||| ||||||||  ||||| ||| |||| |||| | |||||||||||  | |||||||||||| ||||    
T  31918662 tttttacatttgggacgggtttgggtatgggttcggggtgggtaactatatacccattactcgtcccatacccgtgtttcgagatcggggaaaacccata 31918563  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    | || ||||||||||| ||||| | ||||||||||||||| |||| |||||| || |  | || |||| | |||| ||||||||||||||    
T  31918562 ctcatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggttcgggcaggtaaccacggatatgggttttgttgccatg 31918473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 415 - 580
Target Start/End: Complemental strand, 18269742 - 18269575
Alignment:
Q  415 gtgatctaacaaaacatttctttgataatgat--tgtttatgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatccttg 512  Q
    ||||||| || |||| ||||| ||||||||||  ||| ||| ||||||||||| |  | ||||||||||| ||||||||||||| ||| ||| |||||||    
T  18269742 gtgatctgacgaaacctttctgtgataatgatcatgtgtataattacccttttgccctcatgtctatattgaacacaaggcatagaccgtgtcatccttg 18269643  T
Q  513 tctagtttaatattgaacccatagacatttttgctgatatgtaagaagcgcaaattccatctaggtca 580  Q
    ||||||| |||||||  ||| ||||||||| | ||| |||||| || | |||||||||||||||||||    
T  18269642 tctagttcaatattgggcccgtagacatttctcctgttatgtaggaggggcaaattccatctaggtca 18269575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 411 - 580
Target Start/End: Complemental strand, 26971136 - 26970965
Alignment:
Q  411 ttatgtgatctaacaaaacatttctttgataatgat--tgtttatgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatc 508  Q
    ||||||||||| || |||| ||||| ||||||||||  ||| ||| ||||||||||| |  | ||||||||||| ||||||||||||| ||  ||| |||    
T  26971136 ttatgtgatctgacgaaacctttctgtgataatgatcatgtgtataattacccttttgccctcatgtctatattgaacacaaggcatagactgtgtcatc 26971037  T
Q  509 cttgtctagtttaatattgaacccatagacatttttgctgatatgtaagaagcgcaaattccatctaggtca 580  Q
    ||||||||||| |||||||  ||| ||||||||| | ||| |||||| || | |||||||||||||||||||    
T  26971036 cttgtctagttcaatattgggcccgtagacatttctcctgttatgtaggaggggcaaattccatctaggtca 26970965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 432 - 580
Target Start/End: Complemental strand, 5707972 - 5707822
Alignment:
Q  432 ttctttgataatgat--tgtttatgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatccttgtctagtttaatattgaa 529  Q
    |||||||||||||||  ||| ||| ||||||||||| |  | ||||||||||| ||||||||||||| ||| ||| |||||||||||||| |||||||      
T  5707972 ttctttgataatgatcatgtgtataattacccttttgccctcatgtctatattgaacacaaggcatagaccgtgtcatccttgtctagttcaatattggg 5707873  T
Q  530 cccatagacatttttgctgatatgtaagaagcgcaaattccatctaggtca 580  Q
    ||| ||||||||| | ||| |||||| || | |||||||||||||||||||    
T  5707872 cccgtagacatttctcctgttatgtaggaggggcaaattccatctaggtca 5707822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 432 - 580
Target Start/End: Complemental strand, 5714600 - 5714450
Alignment:
Q  432 ttctttgataatgat--tgtttatgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatccttgtctagtttaatattgaa 529  Q
    |||||||||||||||  ||| ||| ||||||||||| |  | ||||||||||| ||||||||||||| ||| ||| |||||||||||||| |||||||      
T  5714600 ttctttgataatgatcatgtgtataattacccttttgccctcatgtctatattgaacacaaggcatagaccgtgtcatccttgtctagttcaatattggg 5714501  T
Q  530 cccatagacatttttgctgatatgtaagaagcgcaaattccatctaggtca 580  Q
    ||| ||||||||| | ||| |||||| || | |||||||||||||||||||    
T  5714500 cccgtagacatttctcctgttatgtaggaggggcaaattccatctaggtca 5714450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 39 - 178
Target Start/End: Original strand, 10302075 - 10302214
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || || | |||||||| ||||| ||||||||| |||| |||||||||||||||| |||||||  ||| ||||||||||||||  | |    
T  10302075 tttttacatttgggacggatatgggtatgggttcggggtgggtacatataaccccgttacccgtctcatacccgtactttgaaatcggggaaaacctaaa 10302174  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaa 178  Q
    |||| ||||||||||||||||| | |||||||||| ||||    
T  10302175 cccatacccaaacccaatcaaaacggggaaaacccatcaa 10302214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 417 - 580
Target Start/End: Complemental strand, 869264 - 869099
Alignment:
Q  417 gatctaacaaaacatttctttgataatgat--tgtttatgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatccttgtc 514  Q
    |||||||| |||| ||||| ||||||||||  ||| ||| ||||| ||||| |  | ||||||||||| ||||||||||||| ||| ||| |||||||||    
T  869264 gatctaacgaaacctttctgtgataatgatcatgtgtataattactcttttgccctcatgtctatattgaacacaaggcatagaccgtgtcatccttgtc 869165  T
Q  515 tagtttaatattgaacccatagacatttttgctgatatgtaagaagcgcaaattccatctaggtca 580  Q
    ||||| |||||||  ||| ||||||||| | ||| |||||| || | |||||||||||||||||||    
T  869164 tagttcaatattgggcccgtagacatttctcctgttatgtaggaggagcaaattccatctaggtca 869099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 39 - 228
Target Start/End: Complemental strand, 5902718 - 5902535
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || ||||||||||||| ||||| ||||||||| ||||| ||||||||||||| | |||||||||||  | |||||||||||| ||||    
T  5902718 tttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaacccata 5902619  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    ||||||      |||| ||||| | ||||||||||||||| |||  |||||| || | || || |||| |||||  ||||||||||||||    
T  5902618 cccaaa------cccagtcaaaacggggaaaacccgtcaaattgagtttggttcgggcgggtaaccacgggtataggttttgttgccatg 5902535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 413 - 580
Target Start/End: Original strand, 10620869 - 10621038
Alignment:
Q  413 atgtgatctaacaaaacatttctttgataatgat--tgtttatgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatcct 510  Q
    ||||||||| || |||| ||||| ||||||||||  ||| ||| ||||||||||| |  | ||||||||||| |||| |||||||| ||| ||| |||||    
T  10620869 atgtgatctgacgaaacctttctgtgataatgatcatgtgtataattacccttttgccctcatgtctatattgaacataaggcatagaccgtgtcatcct 10620968  T
Q  511 tgtctagtttaatattgaacccatagacatttttgctgatatgtaagaagcgcaaattccatctaggtca 580  Q
    ||||||||| |||||||  ||| ||||||||| | ||| |||||| || | |||||||||||||||||||    
T  10620969 tgtctagttcaatattgggcccgtagacatttctcctgttatgtaggaggggcaaattccatctaggtca 10621038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 413 - 580
Target Start/End: Original strand, 10627948 - 10628117
Alignment:
Q  413 atgtgatctaacaaaacatttctttgataatgat--tgtttatgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatcct 510  Q
    ||||||||| || |||| ||||| ||||||||||  ||| ||| ||||||||||| |  | ||||||||||| |||| |||||||| ||| ||| |||||    
T  10627948 atgtgatctgacgaaacctttctgtgataatgatcatgtgtataattacccttttgccctcatgtctatattgaacataaggcatagaccgtgtcatcct 10628047  T
Q  511 tgtctagtttaatattgaacccatagacatttttgctgatatgtaagaagcgcaaattccatctaggtca 580  Q
    ||||||||| |||||||  ||| ||||||||| | ||| |||||| || | |||||||||||||||||||    
T  10628048 tgtctagttcaatattgggcccgtagacatttctcctgttatgtaggaggggcaaattccatctaggtca 10628117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 413 - 580
Target Start/End: Original strand, 19926296 - 19926465
Alignment:
Q  413 atgtgatctaacaaaacatttctttgataatgat--tgtttatgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatcct 510  Q
    ||||||||| || |||| ||||| ||||||||||  ||| ||| ||||||||||| |  | ||||||||||| ||||||||||||| ||| ||| |||||    
T  19926296 atgtgatctgacgaaacctttctgtgataatgatcatgtgtataattacccttttgccctcatgtctatattgaacacaaggcatagaccgtgtcatcct 19926395  T
Q  511 tgtctagtttaatattgaacccatagacatttttgctgatatgtaagaagcgcaaattccatctaggtca 580  Q
    ||||||||| |||||||  ||| |||| |||| | ||| |||||| || | |||||||||||||||||||    
T  19926396 tgtctagttcaatattgggcccgtagatatttctcctgttatgtaggaggggcaaattccatctaggtca 19926465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 413 - 580
Target Start/End: Complemental strand, 26964311 - 26964142
Alignment:
Q  413 atgtgatctaacaaaacatttctttgataatgat--tgtttatgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatcct 510  Q
    ||||||||| || |||| ||||| ||||||||||  ||| ||| ||||||||||| |  | ||||||||||| ||||||||||||| ||  ||| |||||    
T  26964311 atgtgatctgacgaaacctttctgtgataatgatcatgtgtataattacccttttgccctcatgtctatattgaacacaaggcatagactgtgtcatcct 26964212  T
Q  511 tgtctagtttaatattgaacccatagacatttttgctgatatgtaagaagcgcaaattccatctaggtca 580  Q
    ||||||||| |||||||  ||| ||||||||| | ||| |||||| || | |||||||||||||||||||    
T  26964211 tgtctagttcaatattgggcccgtagacatttctcctgttatgtaggaggggcaaattccatctaggtca 26964142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 413 - 580
Target Start/End: Original strand, 28392670 - 28392839
Alignment:
Q  413 atgtgatctaacaaaacatttctttgataatgat--tgtttatgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatcct 510  Q
    ||||||||| |  |||| ||||| ||||||||||  ||| ||| ||||||||||| |  | ||||||||||| ||||||||||||| ||| ||| |||||    
T  28392670 atgtgatctgatgaaacctttctgtgataatgatcatgtgtataattacccttttgccctcatgtctatattgaacacaaggcatagaccgtgtcatcct 28392769  T
Q  511 tgtctagtttaatattgaacccatagacatttttgctgatatgtaagaagcgcaaattccatctaggtca 580  Q
    ||||||||| |||||||  ||| ||||||||| | ||| |||||| || | |||||||||||||||||||    
T  28392770 tgtctagttcaatattgggcccgtagacatttctcctgttatgtaggaggggcaaattccatctaggtca 28392839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 38 - 178
Target Start/End: Original strand, 30672953 - 30673091
Alignment:
Q  38 ctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcat 137  Q
    |||| |||||||| |  ||||||||||||  ||||||||||  ||| ||||||||| ||| ||||| ||||||||| |||||||||||| |||||  ||     
T  30672953 ctttctacattcgggtagggtttgggtataggttcgaggtg--tacatatatccccattatccgtcccgtacccgtattttaaaatcggagaaaatccaa 30673050  T
Q  138 acccaaacccaaacccaatcaaagcagggaaaacccgtcaa 178  Q
    || || ||||||||||||||||| |||||||||||||||||    
T  30673051 actcatacccaaacccaatcaaatcagggaaaacccgtcaa 30673091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 57 - 160
Target Start/End: Complemental strand, 14606011 - 14605908
Alignment:
Q  57 gtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaat 156  Q
    ||||||||||| ||||| ||||||||| |||||||| |||||||||||||||||||| |||| ||||||| |||||| || ||||| |||||||| || |    
T  14606011 gtttgggtatgggttcggggtgggtacatatatccctgttacccgtctcgtacccgtattttgaaatcggagaaaacccaaacccatacccaaactcagt 14605912  T
Q  157 caaa 160  Q
    ||||    
T  14605911 caaa 14605908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 95 - 230
Target Start/End: Complemental strand, 19548985 - 19548851
Alignment:
Q  95 ttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccga 194  Q
    ||||||||| |||||| ||||||| |||||||||||||| | || ||| ||||||||||| |||||| |||| ||| ||||||| |||| |||||| ||     
T  19548985 ttacccgtcccgtacctgtgttttgaaatcggggaaaacccttatccatacccaaacccagtcaaag-aggggaaaaccgtcaaattgggtttggttcgg 19548887  T
Q  195 gtggctacccacaggtatgagttttgttgccatgtc 230  Q
    || | |||||| ||||||||||||||||| ||||||    
T  19548886 gtaggtacccataggtatgagttttgttgtcatgtc 19548851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 55 - 133
Target Start/End: Original strand, 29527819 - 29527897
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaac 133  Q
    ||||||||||||| ||||| ||||||||| ||||||||||||||||||| ||||||||| |||| ||||||||||||||    
T  29527819 gggtttgggtatgggttcggggtgggtacatatatccccgttacccgtcacgtacccgtattttgaaatcggggaaaac 29527897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 39 - 148
Target Start/End: Original strand, 32585480 - 32585589
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || ||||||||||||| ||||  ||||||||| ||||| ||||||||| ||| | |||||||||||| ||||||| ||||| |||||    
T  32585480 tttttacatttgggacgggtttgggtatgggttcagggtgggtacctatatacccgttacctgtcccatacccgtgttttgaaatcggagaaaattcata 32585579  T
Q  139 cccaaaccca 148  Q
    ||||||||||    
T  32585580 cccaaaccca 32585589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 107 - 228
Target Start/End: Original strand, 37349171 - 37349292
Alignment:
Q  107 tacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccac 206  Q
    |||||||||||| ||||||||||||||||| || || ||||||||||| ||||| | ||||||||| ||||| |||| |||||| || | || || ||||    
T  37349171 tacccgtgttttgaaatcggggaaaactcaaactcatacccaaacccagtcaaaacggggaaaacctgtcaaattgggtttggttcgggcgggtaaccac 37349270  T
Q  207 aggtatgagttttgttgccatg 228  Q
     |||||| ||||||||||||||    
T  37349271 gggtatgggttttgttgccatg 37349292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 18 - 228
Target Start/End: Complemental strand, 21956937 - 21956729
Alignment:
Q  18 aaaagggcaataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttt 117  Q
    ||||||| ||||||||||||  || ||||||||| | | ||||||||||| ||||| |||||| || |||||||||||||| | |  |||||||||||||    
T  21956937 aaaagggtaataaattgatt--ttctacattcgtaacgagtttgggtatgggttcggggtgggcacctatatccccgttactcattccgtacccgtgttt 21956840  T
Q  118 taaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagtt 217  Q
    |||||||||  ||||| || || || ||||||| ||||| |||   || |||||| ||||| || |||||||| || | || |||||   |||||| |||    
T  21956839 taaaatcggaaaaaacccaaactcatacccaaatccaattaaaatgggaaaaacctgtcaaatttgatttggttcgggcgggtacccgttggtatgggtt 21956740  T
Q  218 ttgttgccatg 228  Q
    |||||| ||||    
T  21956739 ttgttgtcatg 21956729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 413 - 580
Target Start/End: Complemental strand, 8845874 - 8845705
Alignment:
Q  413 atgtgatctaacaaaacatttctttgataatgat--tgtttatgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatcct 510  Q
    ||||||||| || |||| ||||| ||||||||||  ||| ||| ||||||||||| |  | ||||||||||| ||||||||||||| ||  ||| |||||    
T  8845874 atgtgatctgacgaaacctttctgtgataatgatcatgtatataattacccttttgccctcatgtctatattgaacacaaggcatagactgtgtcatcct 8845775  T
Q  511 tgtctagtttaatattgaacccatagacatttttgctgatatgtaagaagcgcaaattccatctaggtca 580  Q
    ||||||||| |||||||  | | ||||||||| | ||| |||||| ||   |||||||||||||||||||    
T  8845774 tgtctagttcaatattgggcacgtagacatttctcctgttatgtaggagaggcaaattccatctaggtca 8845705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 57 - 178
Target Start/End: Complemental strand, 1866635 - 1866514
Alignment:
Q  57 gtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaat 156  Q
    ||||||||||| ||||| ||||| ||| ||||||| | ||||||||||||||||||| |||| |||||||| ||||| ||||| || ||||| ||| | |    
T  1866635 gtttgggtatgggttcggggtggatacatatatccgcattacccgtctcgtacccgtattttgaaatcgggaaaaacccatactcatacccagacctagt 1866536  T
Q  157 caaagcagggaaaacccgtcaa 178  Q
    |||| | ||||||| |||||||    
T  1866535 caaatcggggaaaatccgtcaa 1866514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 37 - 142
Target Start/End: Complemental strand, 10574525 - 10574420
Alignment:
Q  37 tctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactca 136  Q
    ||||| |||||||| |  ||||||||||||||||||| || |||||| ||||||||||||||||||| |||||| || || | ||||||||||||| |||    
T  10574525 tctttctacattcgggtagggtttgggtatgagttcggggcgggtacatatatccccgttacccgtcccgtacctgtattatgaaatcggggaaaattca 10574426  T
Q  137 taccca 142  Q
     |||||    
T  10574425 aaccca 10574420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 39 - 160
Target Start/End: Original strand, 48459472 - 48459593
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | ||||||| |||||||| ||||| ||||||||| ||||| || |||||||||  | ||||| |||||| |||||||||||||| ||||    
T  48459472 tttttacatttgggatgggtatgggtatgggttcggggtgggtacctatatacctgttacccgttccatacccatgttttgaaatcggggaaaacccata 48459571  T
Q  139 cccaaacccaaacccaatcaaa 160  Q
     ||| || |||| |||||||||    
T  48459572 tccatactcaaatccaatcaaa 48459593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 57 - 173
Target Start/End: Original strand, 25941147 - 25941263
Alignment:
Q  57 gtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaat 156  Q
    ||||||||||| ||||| ||||||||| ||| | ||||||||| ||| |||||||||||||| |||||||| ||||| || || ||  |||||||| |||    
T  25941147 gtttgggtatgggttcggggtgggtacctatcttcccgttacctgtcccgtacccgtgttttgaaatcgggaaaaacccaaacacatgcccaaaccaaat 25941246  T
Q  157 caaagcagggaaaaccc 173  Q
    |||||  ||||||||||    
T  25941247 caaagtggggaaaaccc 25941263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 57 - 133
Target Start/End: Complemental strand, 32596270 - 32596194
Alignment:
Q  57 gtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaac 133  Q
    ||||||||||||||| |||||||| || ||||| ||||||||||||| | |||||||||||| ||||||||||||||    
T  32596270 gtttgggtatgagtttgaggtggggacctatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaac 32596194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 39 - 118
Target Start/End: Complemental strand, 33516176 - 33516097
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgtttt 118  Q
    |||||||||| | || ||||||||||||  ||||| |||||||||||||||||| ||||||| |||||||||||||||||    
T  33516176 tttttacatttgagacgggtttgggtataggttcggggtgggtacttatatccctgttacccatctcgtacccgtgtttt 33516097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 56 - 142
Target Start/End: Original strand, 31782621 - 31782707
Alignment:
Q  56 ggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcataccca 142  Q
    |||||||||||||||| | ||||||||| ||||||||||||||| ||  ||||||||| |||| |||||||||||||| || |||||    
T  31782621 ggtttgggtatgagtttggggtgggtacatatatccccgttacctgtaccgtacccgtattttgaaatcggggaaaacccaaaccca 31782707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 45 - 142
Target Start/End: Complemental strand, 1724408 - 1724311
Alignment:
Q  45 cattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcataccca 142  Q
    |||||| || ||||||||||||| ||||| ||||||||| |||||  |||||||||||| | ||||| |||||| |||||||||||||| || |||||    
T  1724408 cattcgggacgggtttgggtatgggttcggggtgggtacctatataaccgttacccgtcccatacccatgttttgaaatcggggaaaacccaaaccca 1724311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 55 - 116
Target Start/End: Original strand, 4652682 - 4652743
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgtt 116  Q
    |||||||||||||||||| | ||| |||| ||||||||||||||||||||||||||||||||    
T  4652682 gggtttgggtatgagttcaaagtgcgtacctatatccccgttacccgtctcgtacccgtgtt 4652743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 55 - 160
Target Start/End: Original strand, 47103745 - 47103850
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 154  Q
    ||||||||||||| ||||| ||||||||| ||||||| ||||||||| | ||||||||| |||| |||| ||||||||| || ||||| ||  |||||||    
T  47103745 gggtttgggtatgggttcggggtgggtacatatatccgcgttacccgccccgtacccgtattttgaaattggggaaaacccaaacccatacaaaaaccca 47103844  T
Q  155 atcaaa 160  Q
     |||||    
T  47103845 gtcaaa 47103850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 63 - 230
Target Start/End: Complemental strand, 4741296 - 4741130
Alignment:
Q  63 gtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagc 162  Q
    ||||| ||||| |||||||||||||||||| |||| ||||| | ||||| ||||||||||||| |||||||||| || || | |||||| || ||||| |    
T  4741296 gtatgggttcggggtgggtacttatatccctgttatccgtcccatacccatgttttaaaatcgaggaaaactcaaactcatatccaaactcagtcaaa-c 4741198  T
Q  163 agggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatgtc 230  Q
     ||||||||  ||||| ||   |||||| ||   || ||||| || ||||||||||||||| ||||||    
T  4741197 ggggaaaacttgtcaatttatgtttggttcggacggatacccgcatgtatgagttttgttgtcatgtc 4741130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 85 - 228
Target Start/End: Complemental strand, 7334254 - 7334112
Alignment:
Q  85 tatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaacttgga 184  Q
    ||||||||| ||| ||||| |||||| ||||||| |||||||||||||  || | ||| ||||||||||| ||||||| || |||||||||||| || |     
T  7334254 tatatccccattatccgtcccgtacc-gtgttttgaaatcggggaaaatccaaatccatacccaaacccagtcaaagcgggaaaaacccgtcaaattagg 7334156  T
Q  185 tttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    |||||| |  | || ||||| || ||||| ||||||||||||||    
T  7334155 tttggttcaggcggatacccgcaagtatgggttttgttgccatg 7334112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 55 - 178
Target Start/End: Original strand, 45065256 - 45065379
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 154  Q
    ||||||||||||| ||||| | ||||||| |||||||| ||||| |||| ||||||||| |||| |||||| |||||||  | ||| | |||||||||||    
T  45065256 gggtttgggtatgcgttcgggatgggtacatatatccctgttactcgtcccgtacccgtattttgaaatcgaggaaaacctaaacctatacccaaaccca 45065355  T
Q  155 atcaaagcagggaaaacccgtcaa 178  Q
     |||||   |||||||| ||||||    
T  45065356 gtcaaattggggaaaactcgtcaa 45065379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 413 - 580
Target Start/End: Original strand, 4426151 - 4426320
Alignment:
Q  413 atgtgatctaacaaaacatttctttgataatgat--tgtttatgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatcct 510  Q
    ||||||||| || |||| ||||| ||||||| ||  ||| ||| |||||||||||||  | ||||||||| | ||||||||||||| |   ||| |||||    
T  4426151 atgtgatctgacgaaacctttctgtgataataatcatgtgtataattaccctttttccctcatgtctatactgaacacaaggcatatattgtgtcatcct 4426250  T
Q  511 tgtctagtttaatattgaacccatagacatttttgctgatatgtaagaagcgcaaattccatctaggtca 580  Q
    ||||||||| |||||||  ||||||||||||| |  || |||||| || | | |||||||||||| ||||    
T  4426251 tgtctagttcaatattgggcccatagacatttctcttgttatgtaggaggggaaaattccatctatgtca 4426320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 76 - 178
Target Start/End: Original strand, 43309511 - 43309613
Alignment:
Q  76 gtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgt 175  Q
    ||||| || |||| |||||||||||||| | |||||||||||| |||||||| ||||| || || || || |||||||| ||||||| | ||||||||||    
T  43309511 gtgggcacatataaccccgttacccgtcccatacccgtgttttgaaatcgggaaaaacccaaactcatactcaaacccagtcaaagcggagaaaacccgt 43309610  T
Q  176 caa 178  Q
    |||    
T  43309611 caa 43309613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 55 - 132
Target Start/End: Original strand, 21544586 - 21544663
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaa 132  Q
    ||||||||||||| ||||| ||||||||| ||||||||| ||||| ||| ||||||||| |||| |||||||| ||||    
T  21544586 gggtttgggtatgggttcggggtgggtacatatatccccattacctgtcccgtacccgtattttgaaatcgggaaaaa 21544663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 77 - 170
Target Start/End: Complemental strand, 33615395 - 33615302
Alignment:
Q  77 tgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaa 170  Q
    ||||||| ||||||||||||||||||| | |||| || || | |||||| |||||||| | ||||| |||||||||||||| ||||||| ||||    
T  33615395 tgggtacctatatccccgttacccgtcccatacctgttttattaaatcgaggaaaacttaaacccatacccaaacccaatctaagcaggtaaaa 33615302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 39 - 136
Target Start/End: Original strand, 33916148 - 33916245
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactca 136  Q
    |||||||||| | |||| |||||||||||||||   ||| ||||||||||||||  ||| |||||||||| ||||| ||| ||||| |||||||||||    
T  33916148 tttttacatttgggatgagtttgggtatgagttttgggtaggtacttatatccctattatccgtctcgtatccgtgatttgaaatccgggaaaactca 33916245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 51 - 160
Target Start/End: Complemental strand, 35304608 - 35304499
Alignment:
Q  51 tgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaa 150  Q
    ||||| ||||||||||||||| | ||| ||||| ||||||||||||||||||| |||||   |||||||||||  | |||||| || ||||| | |||||    
T  35304608 tgatgagtttgggtatgagtttggggtaggtacctatatccccgttacccgtcccgtacttatgttttaaaattagagaaaacccaaacccatatccaaa 35304509  T
Q  151 cccaatcaaa 160  Q
     |||||||||    
T  35304508 tccaatcaaa 35304499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 39 - 160
Target Start/End: Complemental strand, 47239489 - 47239368
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | ||  ||| |||||||| ||||  |||||| || ||||| ||||||||||||| | ||||||||||||||||||||  ||||  ||||    
T  47239489 tttttacatttgggacaggtatgggtatgggttcagggtgggaacctatatacccgttacccgtcccatacccgtgttttaaaatcggaaaaaatccata 47239390  T
Q  139 cccaaacccaaacccaatcaaa 160  Q
    |||| | ||||| |||||||||    
T  47239389 cccatatccaaatccaatcaaa 47239368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 43 - 138
Target Start/End: Original strand, 42907881 - 42907976
Alignment:
Q  43 tacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||| || | ||||||||||| | ||| ||||||||| ||||||||| |||| |||| |||| ||||||||| || |||| |||||||||||    
T  42907881 tacattcgggacgagtttgggtatgggctcggggtgggtacctatatccccattactcgtcccgtatccgtgttttgaattcggagaaaactcata 42907976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 178
Target Start/End: Complemental strand, 12075755 - 12075597
Alignment:
Q  17 aaaaagggcaataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgtt 116  Q
    |||| ||| ||||||||||||  || |||||||  || | ||||| ||| ||||| | ||||||||| ||| ||||  ||||| ||| ||||||||||||    
T  12075755 aaaatgggtaataaattgatt--ttctacattccggacgagtttgagtacgagtttggggtgggtacatatctccctattacctgtcacgtacccgtgtt 12075658  T
Q  117 ttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaa 178  Q
    || |||| ||  |||||||| || || |||||||||| |||||||| || ||||||||||||    
T  12075657 ttgaaattggaaaaaactcaaactcatacccaaacccgatcaaagc-ggaaaaacccgtcaa 12075597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 133
Target Start/End: Original strand, 50684474 - 50684552
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaac 133  Q
    ||||||||||||||||||  | ||||||  |||||| |||||||||||| |||| |||| |||||||||||||| ||||    
T  50684474 gggtttgggtatgagttccggatgggtatctatatctccgttacccgtcccgtatccgtattttaaaatcggggtaaac 50684552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 107 - 228
Target Start/End: Complemental strand, 1724305 - 1724185
Alignment:
Q  107 tacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccac 206  Q
    ||||| |||||| |||||||| ||||| || ||||| ||||||||||| ||||| | |||||||| |||||| |||  |||||| || |||| ||  |||    
T  1724305 tacccatgttttgaaatcgggaaaaacccaaacccatacccaaacccagtcaaa-cggggaaaacacgtcaaattgagtttggttcgggtgggtaaacac 1724207  T
Q  207 aggtatgagttttgttgccatg 228  Q
     ||||||||||||||| |||||    
T  1724206 gggtatgagttttgttaccatg 1724185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 56 - 133
Target Start/End: Complemental strand, 12825548 - 12825471
Alignment:
Q  56 ggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaac 133  Q
    |||||||||||  ||||  ||||||||| |||||  |||||||||||| | |||||||||||| ||||||||||||||    
T  12825548 ggtttgggtataggttcagggtgggtacgtatatatccgttacccgtcccatacccgtgttttgaaatcggggaaaac 12825471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 43 - 132
Target Start/End: Original strand, 37246840 - 37246929
Alignment:
Q  43 tacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaa 132  Q
    ||||||| |||| |||||| ||||||||||||| || |||| ||||||   ||||   ||||||||||||||||||||||||| ||||||    
T  37246840 tacattcatgataggtttgtgtatgagttcgagatgagtacatatatctttgttattagtctcgtacccgtgttttaaaatcgaggaaaa 37246929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 57 - 178
Target Start/End: Original strand, 39086166 - 39086287
Alignment:
Q  57 gtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaat 156  Q
    ||||| ||||||||||   || ||||| ||||||||||||||||||  || |||| |||| | ||||||| ||||||||| || || | |||||||||||    
T  39086166 gtttgagtatgagttcactgtaggtacctatatccccgttacccgtaccgcacccatgttgtgaaatcggagaaaactcaaactcatatccaaacccaat 39086265  T
Q  157 caaagcagggaaaacccgtcaa 178  Q
    |||| | | ||||| |||||||    
T  39086266 caaaacggagaaaatccgtcaa 39086287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 77 - 170
Target Start/End: Complemental strand, 41915062 - 41914969
Alignment:
Q  77 tgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaa 170  Q
    ||||||| |||||||||||||||| || ||||||| | |||| |||||||||||||| || || || |||| |||||| ||||| | |||||||    
T  41915062 tgggtacatatatccccgttacccttcccgtacccatattttgaaatcggggaaaacccaaactcatacccgaacccagtcaaatcggggaaaa 41914969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 447 - 582
Target Start/End: Original strand, 5667703 - 5667836
Alignment:
Q  447 tgtttatgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatccttgtctagtttaatattgaacccatagacatttttgc 546  Q
    ||||||| |||||| |||| |  ||||||||||||| ||||||||||||  | ||||| | |||| || |||| |||||||  ||| |||| |||| | |    
T  5667703 tgtttataattacctttttgccctaatgtctatattgaacacaaggcat--aacatgtcacccttctcaagttcaatattgggcccgtagaaatttctcc 5667800  T
Q  547 tgatatgtaagaagcgcaaattccatctaggtcagt 582  Q
    || |||||| || | |||||||||||||||||||||    
T  5667801 tgttatgtaggaggggcaaattccatctaggtcagt 5667836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 150
Target Start/End: Complemental strand, 9929252 - 9929160
Alignment:
Q  58 tttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaa 150  Q
    |||||||| ||||||| ||||||||| |||||||  |||||||||    ||||||| |||| ||||| || |||||||||||||| |||||||    
T  9929252 tttgggtaagagttcggggtgggtacctatatccatgttacccgtactatacccgtattttgaaatcaggaaaaactcatacccatacccaaa 9929160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 178
Target Start/End: Complemental strand, 12505577 - 12505505
Alignment:
Q  107 tacccgtgttttaaaatcggggaaaactcatacccaaaccc-aaacccaatcaaagcagggaaaacccgtcaa 178  Q
    |||||||||||| |||||||||||||| || || || |||| ||||||||||||||| | |||||||||||||    
T  12505577 tacccgtgttttgaaatcggggaaaacccaaactcataccctaaacccaatcaaagcggagaaaacccgtcaa 12505505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 55 - 126
Target Start/End: Complemental strand, 30266418 - 30266347
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcgg 126  Q
    ||||||||||||| ||||| ||||| ||| |||||||||||||||||||  |||||||| || | |||||||    
T  30266418 gggtttgggtatgggttcggggtggatacatatatccccgttacccgtcctgtacccgtattatgaaatcgg 30266347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 55 - 126
Target Start/End: Original strand, 30285770 - 30285841
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcgg 126  Q
    ||||||||||||| ||||| ||||| ||| |||||||||||||||||||  |||||||| || | |||||||    
T  30285770 gggtttgggtatgggttcggggtggatacatatatccccgttacccgtcctgtacccgtattatgaaatcgg 30285841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 136
Target Start/End: Original strand, 3505295 - 3505356
Alignment:
Q  75 ggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactca 136  Q
    |||| |||| ||||||||||| |||||| |||||||| | ||||||||| ||||||||||||    
T  3505295 ggtgagtacctatatccccgtaacccgtttcgtacccatattttaaaattggggaaaactca 3505356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 130
Target Start/End: Original strand, 16575121 - 16575194
Alignment:
Q  57 gtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaa 130  Q
    ||||||||||  |||||  |||||||||||||||| ||||| || || |||||||| |||||||||||| ||||    
T  16575121 gtttgggtataggttcggagtgggtacttatatcctcgttatccatcccgtacccgcgttttaaaatcgaggaa 16575194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 36306816 - 36306869
Alignment:
Q  79 ggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaa 132  Q
    ||||| ||||||||||||| ||||||| |||||||||||| ||||||| |||||    
T  36306816 ggtacctatatccccgttaaccgtctcatacccgtgttttgaaatcggagaaaa 36306869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 188
Target Start/End: Original strand, 39046943 - 39047092
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || |||| |||||||| ||| |  |||||||| ||||| ||||||||  ||| | |||||||||||  |||| ||||||||| ||||    
T  39046943 tttttacatttgggacgggtatgggtatgggtttggagtgggtacctatatacccgttacatgtcccatacccgtgtttggaaattggggaaaacccata 39047042  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttg 188  Q
    |||| || ||||  || ||||| | | |||||||| |||| |||| ||||    
T  39047043 cccatactcaaattcagtcaaaacggagaaaacccatcaaattgggtttg 39047092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 178
Target Start/End: Original strand, 42299799 - 42299918
Alignment:
Q  57 gtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaat 156  Q
    ||||| ||||| ||||  ||||||||| ||||| ||||||||||||| | |||| ||||||| |||||||||||||  |||||||| ||| |||| || |    
T  42299799 gtttgagtatgggttcagggtgggtacctatatacccgttacccgtc-catacc-gtgttttgaaatcggggaaaatccatacccatacctaaactcagt 42299896  T
Q  157 caaagcagggaaaacccgtcaa 178  Q
    |||| | |  ||||||||||||    
T  42299897 caaaccggaaaaaacccgtcaa 42299918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 178
Target Start/End: Original strand, 37107433 - 37107540
Alignment:
Q  70 ttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaa 169  Q
    |||| ||||||||| ||||| ||||||||||||| | |||||||||||| ||||  |||||||| || || || || |||||||| |||||   || |||    
T  37107433 ttcggggtgggtacctatatacccgttacccgtcccatacccgtgttttgaaat-tgggaaaacccaaactcatacacaaacccagtcaaaatgggaaaa 37107531  T
Q  170 acccgtcaa 178  Q
    |||||||||    
T  37107532 acccgtcaa 37107540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 142
Target Start/End: Complemental strand, 25298921 - 25298834
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcataccca 142  Q
    ||||||||||||| ||||| |||||  |  ||||||||| |||||| || |||||||||||||| ||||| || ||||| || |||||    
T  25298921 gggtttgggtatgggttcggggtggacagctatatccccattacccatcccgtacccgtgttttgaaatccggaaaaacccaaaccca 25298834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 123
Target Start/End: Complemental strand, 29035611 - 29035552
Alignment:
Q  64 tatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaat 123  Q
    |||||||||||||| ||||||||||||  | ||| ||||| |||||| ||||||||||||    
T  29035611 tatgagttcgaggttggtacttatatcttcattatccgtcccgtaccggtgttttaaaat 29035552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 123
Target Start/End: Complemental strand, 29047744 - 29047685
Alignment:
Q  64 tatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaat 123  Q
    |||||||||||||| ||||||||||||  | ||| ||||| |||||| ||||||||||||    
T  29047744 tatgagttcgaggttggtacttatatcttcattatccgtcccgtaccggtgttttaaaat 29047685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 228
Target Start/End: Original strand, 36919132 - 36919303
Alignment:
Q  57 gtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaat 156  Q
    ||||||||||| |||   | ||| ||| ||||||| |||||| ||||   ||| | ||||||||| |||||||||||||| || || ||||||||||| |    
T  36919132 gtttgggtatgggttaaggatggatacctatatccacgttactcgtcctatacacatgttttaaagtcggggaaaactcaaactcatacccaaacccagt 36919231  T
Q  157 caaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
     |||||  | |||||||||||| |||  |||||| ||  ||  ||||| |  ||||||||||||||| ||||    
T  36919232 taaagcgagaaaaacccgtcaaattgagtttggttcggatgcgtacccgcgagtatgagttttgttgtcatg 36919303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 88 - 178
Target Start/End: Complemental strand, 25265219 - 25265130
Alignment:
Q  88 atccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaa 178  Q
    |||| |||||||  || ||||||| ||||||||||||||||||||| || | ||| |||||||| || ||||||| |  ||||||||||||    
T  25265219 atccacgttacctatcccgtacccatgttttaaaatcggggaaaaccca-agccatacccaaacgcagtcaaagcggaaaaaacccgtcaa 25265130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 136
Target Start/End: Original strand, 3516348 - 3516405
Alignment:
Q  79 ggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactca 136  Q
    ||||| |||||| | ||||| ||| ||||||||||||||| ||||||| |||||||||    
T  3516348 ggtacctatatcactgttactcgtttcgtacccgtgttttgaaatcggagaaaactca 3516405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 162
Target Start/End: Original strand, 3737789 - 3737890
Alignment:
Q  61 gggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaa 160  Q
    ||||||| ||||| | ||||||| |||| || ||||||||||| | |||||||||||| |||| ||| ||||| |  ||||| ||| ||||| | |||||    
T  3737789 gggtatgggttcgggatgggtacatataacctcgttacccgtcccatacccgtgttttgaaattgggaaaaaccctaacccacacctaaaccaagtcaaa 3737888  T
Q  161 gc 162  Q
    ||    
T  3737889 gc 3737890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 475 - 540
Target Start/End: Complemental strand, 10689886 - 10689821
Alignment:
Q  475 tctatattaaacacaaggcatacaccatgtgatccttgtctagtttaatattgaacccatagacat 540  Q
    |||||||| ||||||| ||||| ||| ||| |||||||||||||| |||||||  | |||||||||    
T  10689886 tctatattgaacacaatgcatagaccgtgtcatccttgtctagttcaatattgggctcatagacat 10689821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 475 - 540
Target Start/End: Complemental strand, 10903526 - 10903461
Alignment:
Q  475 tctatattaaacacaaggcatacaccatgtgatccttgtctagtttaatattgaacccatagacat 540  Q
    |||||||| ||||||| ||||| ||| ||| |||||||||||||| |||||||  | |||||||||    
T  10903526 tctatattgaacacaatgcatagaccgtgtcatccttgtctagttcaatattgggctcatagacat 10903461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 190
Target Start/End: Original strand, 39375315 - 39375420
Alignment:
Q  85 tatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaacttgga 184  Q
    ||||| |||||||||||||   ||||||| |||| |||||||||||||  || || || | |||||| || |||||  ||| |||||||||||| ||| |    
T  39375315 tatatacccgttacccgtcctatacccgtattttgaaatcggggaaaagccaaactcatatccaaactcagtcaaaataggaaaaacccgtcaaattgaa 39375414  T
Q  185 tttggt 190  Q
    ||||||    
T  39375415 tttggt 39375420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 82; Significance: 3e-38; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 39 - 228
Target Start/End: Complemental strand, 49250876 - 49250687
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || ||||||||||||| ||||||||||| ||| ||||| ||| ||||||||| | |||||||||||| | |||||||||||||||||    
T  49250876 tttttacatttgggacgggtttgggtatgggttcgaggtggatacctatatacccattacccgtcccatacccgtgttttgagatcggggaaaactcata 49250777  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    |||| ||||||||||| ||||| | | ||||||||||||| ||| ||||||| || | || || |||| ||||||| |||||||| ||||    
T  49250776 cccatacccaaacccagtcaaaacggagaaaacccgtcaaattgaatttggttcgggcggataaccacgggtatgaattttgttgtcatg 49250687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 17 - 227
Target Start/End: Original strand, 16903481 - 16903697
Alignment:
Q  17 aaaaagggcaataaattgattctttt------tacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacc 110  Q
    ||||||||||||||||||||| ||||      |||||||| || ||||||||||||||||||| ||||||||| ||||||||| |||||  || |||||     
T  16903481 aaaaagggcaataaattgattttttttttttttacattcgggacgggtttgggtatgagttcggggtgggtacctatatccccattacctatcccgtact 16903580  T
Q  111 cgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggt 210  Q
    ||||||||||||| ||| ||||   | |||||  |||||||||||||||||   |||||| ||||||||||||||||||| ||| ||  ||| || ||||    
T  16903581 cgtgttttaaaattgggaaaaatctaaacccatgcccaaacccaatcaaagtgaggaaaatccgtcaacttggatttggttcgaatgagtactcataggt 16903680  T
Q  211 atgagttttgttgccat 227  Q
    ||| |||||||||||||    
T  16903681 atgtgttttgttgccat 16903697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 39 - 190
Target Start/End: Complemental strand, 23490874 - 23490723
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || |||||| |||||| ||||| ||||||||| ||||| ||||||||||||| | |||||||||||  | |||||||||||| ||||    
T  23490874 tttttacatttgggacgggttttggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaacccata 23490775  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 190  Q
    |||| ||||||||||| ||||| |||| |||||||||||| |||||||||||    
T  23490774 cccatacccaaacccagtcaaaacaggaaaaacccgtcaaattggatttggt 23490723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 38 - 228
Target Start/End: Complemental strand, 36187324 - 36187134
Alignment:
Q  38 ctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcat 137  Q
    ||||||||||| | || ||||||||||||| ||||  ||||||||| ||||| ||||||||||||| | |||||||||||| | |||||||||||| |||    
T  36187324 ctttttacatttgggacgggtttgggtatgggttcagggtgggtacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccat 36187225  T
Q  138 acccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    ||||| ||||||||||| ||||| | ||||||||||| ||| |||  |||||| || | || || | || |||||| ||||||||||||||    
T  36187224 acccatacccaaacccagtcaaaacggggaaaacccgccaaattgagtttggttcgggcgggtaacgacgggtatgggttttgttgccatg 36187134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 60 - 228
Target Start/End: Original strand, 17134954 - 17135122
Alignment:
Q  60 tgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaa 159  Q
    |||||||| ||||| ||  ||||| ||||| ||||||||||||||| |||||||||||| |||||||||||||| |||||||| ||||||||||| ||||    
T  17134954 tgggtatgggttcggggatggtacctatatacccgttacccgtctcatacccgtgttttgaaatcggggaaaacccatacccacacccaaacccagtcaa 17135053  T
Q  160 agcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    | ||| ||||| ||||||| |||| |||||| || | || || || | |||||| ||||||||||||||    
T  17135054 aacagagaaaatccgtcaaattgggtttggttcgggcgggtaaccgcgggtatgggttttgttgccatg 17135122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 55 - 230
Target Start/End: Complemental strand, 44615562 - 44615387
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 154  Q
    ||||||||||||||||| | ||||||||| ||||| || |||||||||| | |||||||||||| ||||| |||||||| || || || |||||||||||    
T  44615562 gggtttgggtatgagtttggggtgggtacctatatacctgttacccgtcccatacccgtgtttttaaatcagggaaaacccaaactcatacccaaaccca 44615463  T
Q  155 atcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatgtc 230  Q
     ||||| | || |||||||||||| |||  ||||||| | |||| || |||| |||||| ||||||||||||||||    
T  44615462 gtcaaaacgggaaaaacccgtcaaattgagtttggtctgggtgggtaaccacgggtatgggttttgttgccatgtc 44615387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 55 - 230
Target Start/End: Original strand, 44793007 - 44793182
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 154  Q
    ||||||||||||||||| | ||||||||| ||||| || |||||||||| | |||||||||||| ||||| |||||||| || || || |||||||||||    
T  44793007 gggtttgggtatgagtttggggtgggtacctatatacctgttacccgtcccatacccgtgtttttaaatcagggaaaacccaaactcatacccaaaccca 44793106  T
Q  155 atcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatgtc 230  Q
     ||||| | || |||||||||||| |||  ||||||| | |||| || |||| |||||| ||||||||||||||||    
T  44793107 gtcaaaacgggaaaaacccgtcaaattgagtttggtctgggtgggtaaccacgggtatgggttttgttgccatgtc 44793182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 39 - 228
Target Start/End: Complemental strand, 19572615 - 19572426
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || |||| || ||||| ||||| ||||||||| ||||| ||||||||| ||| | |||||||||||| |||||||| ||||| ||||    
T  19572615 tttttacatttgggacgggtatgagtatgggttcggggtgggtacctatatacccgttacctgtcccatacccgtgttttgaaatcgggaaaaacccata 19572516  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    |||| ||||||||||| |||||   ||||||||||||||| || | |||||| || | || || ||||| ||||| ||||||||||||||    
T  19572515 cccatacccaaacccagtcaaaatggggaaaacccgtcaaattaggtttggttcgggcgggtaaccacaagtatgggttttgttgccatg 19572426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 39 - 228
Target Start/End: Original strand, 28297920 - 28298121
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaact---- 134  Q
    |||||||||| | || ||||||||||||| ||||| ||||||||| ||||| ||||||||||||| | |||||||||||  | |||||||||||||        
T  28297920 tttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaactcata 28298019  T
Q  135 --------catacccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgcca 226  Q
            |||||||| ||||||| ||||||||| ||||||||||||||||| ||||||||||| || |||| || |||| | |||||||||||||| ||    
T  28298020 cccatacccatacccatacccaaatccaatcaaaacagggaaaacccgtcaaattggatttggttcgggtgggtaaccacggatatgagttttgttgaca 28298119  T
Q  227 tg 228  Q
    ||    
T  28298120 tg 28298121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 413 - 580
Target Start/End: Original strand, 18532050 - 18532219
Alignment:
Q  413 atgtgatctaacaaaacatttctttgataatgat--tgtttatgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatcct 510  Q
    ||||||||| || |||| ||||| ||||||||||  ||| ||| ||||||||||| |  | ||||||||||||||||||||||||| ||| ||| |||||    
T  18532050 atgtgatctgacgaaacctttctgtgataatgatcatgtgtataattacccttttgccctcatgtctatattaaacacaaggcatagaccgtgtcatcct 18532149  T
Q  511 tgtctagtttaatattgaacccatagacatttttgctgatatgtaagaagcgcaaattccatctaggtca 580  Q
    ||||||||| |||||||  ||| ||||||||| | ||| |||||| || | |||||||||||||||||||    
T  18532150 tgtctagttcaatattgggcccgtagacatttctcctgttatgtaggaggggcaaattccatctaggtca 18532219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 55 - 228
Target Start/End: Original strand, 12495012 - 12495185
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 154  Q
    ||||||||||||| ||||||||||||||| ||||| |||||||| |||| | || ||||||||| |||||||| |||||  | ||||| ||| |||||||    
T  12495012 gggtttgggtatgggttcgaggtgggtacctatatacccgttacacgtcccatatccgtgttttgaaatcgggaaaaaccaaaacccataccgaaaccca 12495111  T
Q  155 atcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
     ||||||  ||||||| ||||||| ||||||||||| |  |||| || ||||| |||||| |||||||| ||||    
T  12495112 gtcaaagtggggaaaatccgtcaaattggatttggttcaggtgggtaaccacatgtatgaattttgttgtcatg 12495185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 39 - 228
Target Start/End: Complemental strand, 24236864 - 24236675
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || ||||||| ||||| ||||| ||||||||| ||||| |||||| |||||  | |||||||||||| | |||||||||||| ||||    
T  24236864 tttttacatttgggacgggtttgagtatgggttcggggtgggtacctatatacccgttccccgttccatacccgtgttttgagatcggggaaaacccata 24236765  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    |||| ||| ||||||| ||||| | || |||||||||||| |||  |||||| || | || || |||  |||||||||||||||||||||    
T  24236764 cccatacctaaacccagtcaaaacgggaaaaacccgtcaaattgagtttggttcgggcgggtaaccatgggtatgagttttgttgccatg 24236675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 45 - 228
Target Start/End: Complemental strand, 9982987 - 9982804
Alignment:
Q  45 cattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaa 144  Q
    |||||| |||||||||||||||| ||||| ||||||||| ||||| | |||||||| || | | |||||||||| |||| |||||||| ||| || || |    
T  9982987 cattcgggatgggtttgggtatgggttcggggtgggtacctatatactcgttacccatcccattcccgtgttttgaaattggggaaaattcaaactcata 9982888  T
Q  145 cccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    |||||||||| ||||| | | ||||| || |||| ||||||||||| || | |  || |||| |||||||||||||||||||||    
T  9982887 cccaaacccagtcaaaacggagaaaatccatcaaattggatttggttcgggagagtaaccacgggtatgagttttgttgccatg 9982804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 413 - 580
Target Start/End: Complemental strand, 18252701 - 18252532
Alignment:
Q  413 atgtgatctaacaaaacatttctttgataatgat--tgtttatgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatcct 510  Q
    ||||||||| || |||| ||||| ||||||||||  ||| ||| ||||||||||| |  | ||||||||||| ||||||||||||| ||| ||| |||||    
T  18252701 atgtgatctgacgaaacctttctgtgataatgatcatgtgtataattacccttttgccctcatgtctatattgaacacaaggcatagaccgtgtcatcct 18252602  T
Q  511 tgtctagtttaatattgaacccatagacatttttgctgatatgtaagaagcgcaaattccatctaggtca 580  Q
    ||||||||| |||||||  ||| ||||||||| | ||| |||||| || | |||||||||||||||||||    
T  18252601 tgtctagttcaatattgggcccgtagacatttctcctgttatgtaggaggggcaaattccatctaggtca 18252532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 39 - 228
Target Start/End: Original strand, 29936402 - 29936597
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || ||||||||||||| ||||| ||||||||| ||||| ||||||||||||| | ||||||| |||| | |||||||||||| ||||    
T  29936402 tttttacatttgggacgggtttgggtatgggttcggggtgggtacctatatacccgttacccgtcccatacccgtattttgagatcggggaaaacccata 29936501  T
Q  139 cccaaacccaaacccaa------tcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    |||| || || ||||||      ||||| | ||||||||||||||| |||| |||||| || | || || |||| |||||| ||||||||| ||||    
T  29936502 cccatactcatacccaaacttagtcaaaacggggaaaacccgtcaaattgggtttggttcgggcgggtaaccacgggtatgggttttgttgtcatg 29936597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 61 - 228
Target Start/End: Original strand, 5181047 - 5181214
Alignment:
Q  61 gggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaa 160  Q
    ||||||| ||| | ||||||| | ||||| ||||||||||||| | ||||||| |||| |||||||||||||| |||||||| ||| ||||||| |||||    
T  5181047 gggtatgggtttggggtgggtgcctatatacccgttacccgtcccatacccgtattttgaaatcggggaaaacccatacccatacctaaacccagtcaaa 5181146  T
Q  161 gcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
       ||||||||||||||| ||| ||||||| || | || || || | |||||| ||||||||||||||    
T  5181147 atggggaaaacccgtcaaattgaatttggttcgggcgggtaaccgcgggtatgggttttgttgccatg 5181214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 39 - 190
Target Start/End: Original strand, 51421844 - 51421995
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || ||||||||||||| ||||| ||||||||| ||||| |  |||||||||| | |||||||||||| | |||||| ||||| ||||    
T  51421844 tttttacatttgggacgggtttgggtatgggttcggggtgggtacatatatacatgttacccgtcccatacccgtgttttgagatcgggaaaaacccata 51421943  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 190  Q
    |||| ||||||||||| |||||   |||||||||| |||| |||| ||||||    
T  51421944 cccatacccaaacccagtcaaaatggggaaaacccatcaaattgggtttggt 51421995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 40 - 190
Target Start/End: Original strand, 34611060 - 34611210
Alignment:
Q  40 ttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatac 139  Q
    ||||||||| | || ||||||||||||| ||||| |||| |||| ||||| | ||||||  ||| | |||||||||||| | |||||| ||||| |||||    
T  34611060 ttttacatttgggacgggtttgggtatgggttcggggtgagtacctatatacacgttacatgtcccatacccgtgttttgagatcgggaaaaacccatac 34611159  T
Q  140 ccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 190  Q
    ||| |||||||  |||||||| | ||||||||||||||| |||||||||||    
T  34611160 ccatacccaaattcaatcaaaacggggaaaacccgtcaaattggatttggt 34611210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 55 - 188
Target Start/End: Original strand, 16408944 - 16409077
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 154  Q
    |||||| | |||| ||||| ||| ||||| ||||| || |||||||||| | |||||||||||| |||| ||||||||| |||||||| |||||||||||    
T  16408944 gggtttagctatgggttcggggtcggtacctatatacctgttacccgtcccatacccgtgttttgaaattggggaaaacccatacccatacccaaaccca 16409043  T
Q  155 atcaaagcagggaaaacccgtcaacttggatttg 188  Q
     ||||| | ||||||||||||||| |||| ||||    
T  16409044 gtcaaaacggggaaaacccgtcaaattgggtttg 16409077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 55 - 160
Target Start/End: Original strand, 23058468 - 23058573
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 154  Q
    ||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||| ||  |||| ||||||| ||||||||| ||||| || ||||||||    
T  23058468 gggtttgggtatgggttcggggtgggtacctatatccccgttacccgtctcgtactcgcattttgaaatcggagaaaactcaaacccatactcaaaccca 23058567  T
Q  155 atcaaa 160  Q
     |||||    
T  23058568 gtcaaa 23058573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 39 - 228
Target Start/End: Complemental strand, 40087566 - 40087378
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || |||| || ||||||||||| ||||||||| ||||| |||||||| | || | |||| ||||||| || ||||||||||||||||    
T  40087566 tttttacatttgggacgggtatgagtatgagttcggggtgggtacctatattcccgttactcatcccatacctgtgttttgaa-tcggggaaaactcata 40087468  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    |||| |||||||| || ||||| | ||||||| ||||||| ||| ||||||| |    || || || | |||||||||||||||||||||    
T  40087467 cccatacccaaactcagtcaaaacggggaaaatccgtcaaattgaatttggttcagacggataaccgcgggtatgagttttgttgccatg 40087378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 39 - 152
Target Start/End: Complemental strand, 45866288 - 45866175
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | ||||||| |||||||||||| | ||||||||| ||||| | | ||||| ||||| |||||||||||| |||||||||||||| ||||    
T  45866288 tttttacatttgggatgggtatgggtatgagtttggggtgggtacctatatactcattacctgtctcatacccgtgttttgaaatcggggaaaacccata 45866189  T
Q  139 cccaaacccaaacc 152  Q
    |||| |||||||||    
T  45866188 cccatacccaaacc 45866175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 56 - 228
Target Start/End: Complemental strand, 34673368 - 34673196
Alignment:
Q  56 ggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaa 155  Q
    |||||||||||| ||||| ||||||||| ||||| ||||||||| ||||| |||||||||||| |||| ||| ||||| || ||||| |||||||||||     
T  34673368 ggtttgggtatgggttcggggtgggtacctatatacccgttaccagtctcatacccgtgttttgaaattgggaaaaacccaaacccatacccaaacccag 34673269  T
Q  156 tcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    | |||   ||||||| |||| || |||| |||||| || | || ||  ||| |||||||||||||||| ||||    
T  34673268 ttaaaatggggaaaatccgttaaattgggtttggttcgggcgggtaatcactggtatgagttttgttgtcatg 34673196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 77 - 228
Target Start/End: Original strand, 24710871 - 24711022
Alignment:
Q  77 tgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtc 176  Q
    ||||||| ||||| ||||||||||||| | |||||||||||| | |||||||||||| ||||| || | ||||||||| ||||| | |||||||||||||    
T  24710871 tgggtacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccatactcatatccaaacccagtcaaaacggggaaaacccgtc 24710970  T
Q  177 aacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    || ||| ||||||| || |||| ||  ||| ||| || ||||||||| ||||    
T  24710971 aaattgaatttggttcgggtggataatcacgggtgtgggttttgttgtcatg 24711022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 61 - 155
Target Start/End: Complemental strand, 50426742 - 50426648
Alignment:
Q  61 gggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaa 155  Q
    ||||||| ||||| ||||||||| ||||| ||||||| ||||||| |||||||||||| ||||| |||||| | |||||||||||||||||||||    
T  50426742 gggtatgggttcggggtgggtacctatatacccgttatccgtctcatacccgtgttttgaaatcagggaaagcccatacccaaacccaaacccaa 50426648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 95 - 228
Target Start/End: Original strand, 23968621 - 23968754
Alignment:
Q  95 ttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccga 194  Q
    ||||||||| | |||||||||||| ||| |||||||||| |||||||| |||||||||||||||||   ||||||| ||||||| |||| |||||| ||     
T  23968621 ttacccgtcccatacccgtgttttgaaaccggggaaaacccatacccatacccaaacccaatcaaaatggggaaaatccgtcaaattgggtttggttcgg 23968720  T
Q  195 gtggctacccacaggtatgagttttgttgccatg 228  Q
    | || || || | |||||| ||||||||||||||    
T  23968721 gcgggtaaccgcgggtatgggttttgttgccatg 23968754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 39 - 190
Target Start/End: Complemental strand, 18354183 - 18354032
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || | || |||||||  ||||| |||||| |||||||| ||||||||||||| | ||||| |||||| |||||||||||||| ||||    
T  18354183 tttttacatttgggacgagtatgggtatcggttcggggtgggaacttatatacccgttacccgtcccatacccatgttttgaaatcggggaaaacccata 18354084  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 190  Q
    |||| |  |||| ||| ||||| | || |||||||||||| ||| |||||||    
T  18354083 cccatattcaaatccagtcaaaacgggaaaaacccgtcaaattgaatttggt 18354032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 37 - 160
Target Start/End: Complemental strand, 35069994 - 35069871
Alignment:
Q  37 tctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactca 136  Q
    ||||| |||||||| |  ||||||| ||||| ||||| ||||||||| |||||||| ||||||||||| |||||||| || | |||||||||||||||||    
T  35069994 tctttctacattcgggtagggtttgagtatgggttcggggtgggtacatatatccctgttacccgtcttgtacccgtattatgaaatcggggaaaactca 35069895  T
Q  137 tacccaaacccaaacccaatcaaa 160  Q
     || || ||||||| ||| |||||    
T  35069894 aactcatacccaaatccagtcaaa 35069871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 61 - 160
Target Start/End: Complemental strand, 42707917 - 42707819
Alignment:
Q  61 gggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaa 160  Q
    ||||||| ||||| |||| |||||||||| ||||||||||||| | |||||||||||| ||||||| |||||||||||| || ||||||||||| |||||    
T  42707917 gggtatgggttcg-ggtgagtacttatattcccgttacccgtcccatacccgtgttttgaaatcggagaaaactcatactcatacccaaacccagtcaaa 42707819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 38 - 131
Target Start/End: Complemental strand, 10450163 - 10450070
Alignment:
Q  38 ctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaa 131  Q
    |||| |||||||| |  ||||||||||||||||||| ||||||||| |||||||| |||||||| | ||||||||| ||||||||| |||||||    
T  10450163 ctttctacattcgggtagggtttgggtatgagttcggggtgggtacatatatccctgttacccgccccgtacccgtattttaaaattggggaaa 10450070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 43 - 228
Target Start/End: Complemental strand, 29871384 - 29871200
Alignment:
Q  43 tacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcataccca 142  Q
    |||||||| || ||||||||||||||||||  ||||||||| ||||| || |||||| ||| | ||||| |||||| ||||||| |||||| || || ||    
T  29871384 tacattcgggacgggtttgggtatgagttcagggtgggtacctatataccagttacctgtcccatacccatgttttgaaatcggagaaaacccaaactca 29871285  T
Q  143 aacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
     ||||||||  | ||||| |  |||||||||||||| |||  ||||||| || ||| || ||||  ||||||||||||||| ||||    
T  29871284 tacccaaacttagtcaaaacgaggaaaacccgtcaaattgagtttggtcgga-tggataaccacgagtatgagttttgttgtcatg 29871200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 39 - 178
Target Start/End: Complemental strand, 10778670 - 10778531
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || |||| || ||||| ||||| ||||| ||  |||| |||||||||||||| | |||||||||||| |||||||| |||||| | |    
T  10778670 tttttacatttgagacgggtatgagtatgggttcggggtggatatctataaccccgttacccgtcccatacccgtgttttgaaatcgggaaaaacttaaa 10778571  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaa 178  Q
    | || ||||||||||| ||||||| |  ||||||||||||    
T  10778570 ctcatacccaaacccagtcaaagcggaaaaaacccgtcaa 10778531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 52 - 190
Target Start/End: Original strand, 13798237 - 13798375
Alignment:
Q  52 gatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaac 151  Q
    ||||||||| ||||||| || | ||||| ||  ||||||| |||||||| |||| |||||||||||| |||||||| ||||| || || || ||||||||    
T  13798237 gatgggtttaggtatgaatttggggtggataaatatatcctcgttacccatctcatacccgtgttttgaaatcgggaaaaacccaaactcatacccaaac 13798336  T
Q  152 ccaatcaaagcagggaaaacccgtcaacttggatttggt 190  Q
    ||| ||| | | |||||||||||| || |||| ||||||    
T  13798337 ccagtcataccggggaaaacccgttaaattgggtttggt 13798375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 413 - 580
Target Start/End: Original strand, 27130946 - 27131115
Alignment:
Q  413 atgtgatctaacaaaacatttctttgataatgat--tgtttatgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatcct 510  Q
    ||||||| | ||||||| ||||  |||||||| |  ||| ||| ||||||||||| |  | ||||||||||| |||||||| |||| ||| ||| |||||    
T  27130946 atgtgatatgacaaaacctttccgtgataatgttcatgtgtataattacccttttgccctcatgtctatattgaacacaagacatagaccgtgtcatcct 27131045  T
Q  511 tgtctagtttaatattgaacccatagacatttttgctgatatgtaagaagcgcaaattccatctaggtca 580  Q
    ||||||||| |||||||  ||| ||||||||| | ||| |||||| || | ||||||| |||||||||||    
T  27131046 tgtctagttcaatattgggcccgtagacatttctcctgttatgtaggaggggcaaattacatctaggtca 27131115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 55 - 132
Target Start/End: Complemental strand, 25154914 - 25154837
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaa 132  Q
    ||||||||| |||||||||| |||||||||||||||||| |||| |||| ||||| |||||||| |||||||| ||||    
T  25154914 gggtttgggcatgagttcgaagtgggtacttatatccccattactcgtcccgtactcgtgttttgaaatcgggaaaaa 25154837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 43 - 124
Target Start/End: Complemental strand, 48125782 - 48125701
Alignment:
Q  43 tacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatc 124  Q
    |||||||| || | ||||||||||| ||||| ||||| ||| ||||||| ||||||||||| ||||||||||||||||||||    
T  48125782 tacattcgcgacgagtttgggtatgggttcggggtggatacctatatcctcgttacccgtcccgtacccgtgttttaaaatc 48125701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 57 - 133
Target Start/End: Original strand, 39219262 - 39219338
Alignment:
Q  57 gtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaac 133  Q
    ||||||||||| ||||| ||||||||| | ||||||||||||  ||  |||||||||||||||||||||||||||||    
T  39219262 gtttgggtatgggttcggggtgggtacatgtatccccgttacttgttccgtacccgtgttttaaaatcggggaaaac 39219338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 437 - 580
Target Start/End: Original strand, 16358595 - 16358740
Alignment:
Q  437 tgataatgat--tgtttatgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatccttgtctagtttaatattgaacccat 534  Q
    ||||||||||  ||| ||| ||||||||||| |  | || |||||||| ||||||||||||| ||| ||| |||||||||||||| |||||||  ||| |    
T  16358595 tgataatgatcatgtgtataattacccttttgccctcatctctatattgaacacaaggcatagaccgtgtcatccttgtctagttcaatattgggcccgt 16358694  T
Q  535 agacatttttgctgatatgtaagaagcgcaaattccatctaggtca 580  Q
    |||||||| |  || |||||| || | | |||||||||||||||||    
T  16358695 agacatttctcttgttatgtaggaggggaaaattccatctaggtca 16358740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 437 - 580
Target Start/End: Original strand, 27310137 - 27310282
Alignment:
Q  437 tgataatgat--tgtttatgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatccttgtctagtttaatattgaacccat 534  Q
    ||||||||||  ||| ||| ||||||||||| |  | ||||||||||| ||||||||||||| ||| ||| |||||||||||||| |||||||  ||  |    
T  27310137 tgataatgatcatgtgtataattacccttttgccctcatgtctatattgaacacaaggcatagaccgtgtcatccttgtctagttcaatattgggcctgt 27310236  T
Q  535 agacatttttgctgatatgtaagaagcgcaaattccatctaggtca 580  Q
    |||||||| | ||| |||||| || | | ||||| |||||||||||    
T  27310237 agacatttctcctgttatgtaggaggggaaaattacatctaggtca 27310282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 60 - 178
Target Start/End: Original strand, 34085242 - 34085360
Alignment:
Q  60 tgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaa 159  Q
    |||||||| ||||| ||||||||| |||| ||||||||||| || | ||| |||||||| |||||||| ||||| || || || | || |||||| ||||    
T  34085242 tgggtatgggttcggggtgggtacatataaccccgttacccatcccatactcgtgttttgaaatcgggaaaaacccaaactcatatcctaacccagtcaa 34085341  T
Q  160 agcagggaaaacccgtcaa 178  Q
    ||| | |||||||||||||    
T  34085342 agcggagaaaacccgtcaa 34085360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 61 - 142
Target Start/End: Complemental strand, 34060106 - 34060025
Alignment:
Q  61 gggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcataccca 142  Q
    ||||||| |||||  |||||||| ||||| || |||| ||||||| |||||||||||| |||||| ||||||||||||||||    
T  34060106 gggtatgggttcggagtgggtacctatatacctgttatccgtctcatacccgtgttttgaaatcgaggaaaactcataccca 34060025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 112 - 228
Target Start/End: Original strand, 13390456 - 13390571
Alignment:
Q  112 gtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggta 211  Q
    ||||||| ||||||||||||| ||||||||| ||||||||||| ||||| | ||| ||||||||||| |||| |||||| || | || || ||   ||||    
T  13390456 gtgttttgaaatcggggaaaattcatacccatacccaaacccagtcaaaac-ggggaaacccgtcaaattgggtttggttcgggcgggtaaccgtgggta 13390554  T
Q  212 tgagttttgttgccatg 228  Q
    || ||||||||||||||    
T  13390555 tgggttttgttgccatg 13390571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 63 - 142
Target Start/End: Complemental strand, 3628064 - 3627985
Alignment:
Q  63 gtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcataccca 142  Q
    ||||| ||||| ||||||||| || || ||||||||||||| | |||||||||||| ||||||||||||||  |||||||    
T  3628064 gtatgggttcggggtgggtacctacatacccgttacccgtcccatacccgtgttttgaaatcggggaaaacctataccca 3627985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 118
Target Start/End: Complemental strand, 5283680 - 5283617
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgtttt 118  Q
    |||||| |||||||||||||||||||||||| ||||||| ||||||||| ||||| | ||||||    
T  5283680 gggtttaggtatgagttcgaggtgggtacttctatccccattacccgtcccgtactcatgtttt 5283617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 75 - 178
Target Start/End: Complemental strand, 19003733 - 19003630
Alignment:
Q  75 ggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccg 174  Q
    ||||| ||| ||||||||||||| ||||| | ||||||| ||||  ||||||||||||| |  ||||| ||||||||| | ||||| | |||||||||||    
T  19003733 ggtggatacatatatccccgttatccgtcccatacccgtattttgtaatcggggaaaacccgaacccatacccaaacctagtcaaatcggggaaaacccg 19003634  T
Q  175 tcaa 178  Q
    ||||    
T  19003633 tcaa 19003630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 85 - 160
Target Start/End: Complemental strand, 33293588 - 33293513
Alignment:
Q  85 tatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaa 160  Q
    ||||||||| ||||||||| | |||||||||||| |||||||| ||||| || || || |||||||||||||||||    
T  33293588 tatatccccattacccgtcccatacccgtgttttgaaatcgggaaaaacccaaactcatacccaaacccaatcaaa 33293513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 133
Target Start/End: Complemental strand, 16237391 - 16237313
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaac 133  Q
    ||||||||||||| ||||| |||  |||| ||||||| ||||||||||| | ||||||| |||| ||||||||||||||    
T  16237391 gggtttgggtatgggttcggggttagtacatatatcctcgttacccgtcccttacccgtattttgaaatcggggaaaac 16237313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 39 - 160
Target Start/End: Complemental strand, 17092062 - 17091941
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || |||| |||| ||| ||||| |||| || | ||||| |||||||| |||| | |||| ||||| |||||||||||||||||||||    
T  17092062 tttttacatttgggacgggtatgggcatgggttcggggtgagtgcctatatacccgttacgcgtcccatacctgtgttataaaatcggggaaaactcata 17091963  T
Q  139 cccaaacccaaacccaatcaaa 160  Q
    | || | |||||| || |||||    
T  17091962 ctcatatccaaactcagtcaaa 17091941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 132
Target Start/End: Complemental strand, 12718858 - 12718782
Alignment:
Q  56 ggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaa 132  Q
    |||||||||||| ||||  ||||||||| |||||  |||||||||||||||||| ||| || | |||||||||||||    
T  12718858 ggtttgggtatgggttcagggtgggtacatatatttccgttacccgtctcgtacacgtattatgaaatcggggaaaa 12718782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 54 - 143
Target Start/End: Complemental strand, 16433252 - 16433166
Alignment:
Q  54 tgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaa 143  Q
    |||||||||||||| ||||| ||   |||| |||||  |||||||||||| | |||||||||||| ||||||| ||||||||| ||||||    
T  16433252 tgggtttgggtatgggttcgggg---gtacctatatatccgttacccgtcccatacccgtgttttgaaatcggagaaaactcaaacccaa 16433166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 436 - 555
Target Start/End: Complemental strand, 23507546 - 23507427
Alignment:
Q  436 ttgataatgattgtt--tatgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatccttgtctagtttaatattgaaccca 533  Q
    |||||||||||| ||  ||| ||||||||||||| ||  |||||||||| ||||||||||||  ||| ||| | ||| ||||||||||||||||  |||     
T  23507546 ttgataatgatttttcgtataattaccctttttccttcgtgtctatattgaacacaaggcat--accgtgtcaccctggtctagtttaatattggtccct 23507449  T
Q  534 tagacatttttgctgatatgta 555  Q
    ||||||||| | ||| ||||||    
T  23507448 tagacatttatcctgttatgta 23507427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 178
Target Start/End: Complemental strand, 42729029 - 42728910
Alignment:
Q  57 gtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaat 156  Q
    ||||||||||||||||| ||| | |||  |||||||| | || ||||| |||||| |||||| |||||||| |||||  | ||||| | ||||||| |||    
T  42729029 gtttgggtatgagttcggggtagttacccatatccccatcactcgtcttgtacccatgttttgaaatcgggaaaaac-gaaacccatatccaaaccaaat 42728931  T
Q  157 caaagcagggaaaacccgtcaa 178  Q
    |||||| |||| ||||||||||    
T  42728930 caaagc-gggataacccgtcaa 42728910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 190
Target Start/End: Complemental strand, 48576184 - 48576064
Alignment:
Q  76 gtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaact------catacccaaacccaaacccaatcaaagcagggaaa 169  Q
    ||||| |||| ||||||| ||||||||||| |||| ||||||| | || ||||||||||      |||||||| ||||||||| | |||||   ||||||    
T  48576184 gtgggcacttttatccccattacccgtctcatacctgtgttttgagattggggaaaactctaacccatacccatacccaaacctagtcaaaatggggaaa 48576085  T
Q  170 acccgtcaacttggatttggt 190  Q
    |||| |||| |||||||||||    
T  48576084 acccatcaatttggatttggt 48576064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 190
Target Start/End: Original strand, 2514811 - 2514895
Alignment:
Q  107 tacccgtgttttaaaatcggggaaaactcatacccaaaccc-aaacccaatcaaagcagggaaaacccgtcaacttggatttggt 190  Q
    |||||||||||| |||| ||||||||| || || || |||| ||||||||||||| | |||||||||| |||| |||| ||||||    
T  2514811 tacccgtgttttgaaattggggaaaacccaaactcataccccaaacccaatcaaaacggggaaaacccatcaagttgggtttggt 2514895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 476 - 580
Target Start/End: Original strand, 3855520 - 3855624
Alignment:
Q  476 ctatattaaacacaaggcatacaccatgtgatccttgtctagtttaatattgaacccatagacatttttgctgatatgtaagaagcgcaaattccatcta 575  Q
    ||||||| ||||||||||||| ||| ||| |||||||||||||| |||||||  | | ||||||||| | ||| |||||  || | | ||||| ||||||    
T  3855520 ctatattgaacacaaggcatagaccgtgtcatccttgtctagttcaatattgggctcgtagacatttctcctgttatgttggaggggaaaatttcatcta 3855619  T
Q  576 ggtca 580  Q
    |||||    
T  3855620 ggtca 3855624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 178
Target Start/End: Original strand, 39616333 - 39616417
Alignment:
Q  94 gttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaa 178  Q
    ||||||||||   |||||||||||| |||| ||||||||| ||||| || |||||||| || ||||| | |||||||| ||||||    
T  39616333 gttacccgtcctatacccgtgttttgaaataggggaaaacccatactcatacccaaactcagtcaaaacggggaaaactcgtcaa 39616417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 177
Target Start/End: Original strand, 13020651 - 13020717
Alignment:
Q  111 cgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtca 177  Q
    |||||||| |||||||||||||| |||||||| | ||||||||| ||||  | | ||||||||||||    
T  13020651 cgtgttttgaaatcggggaaaacccatacccataaccaaacccagtcaagacggagaaaacccgtca 13020717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 228
Target Start/End: Original strand, 20774651 - 20774741
Alignment:
Q  138 acccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    ||||| ||||||||||| ||||| | ||||||| ||||||| |||| |||||| || | || || ||||  ||||| ||||||||||||||    
T  20774651 acccatacccaaacccagtcaaaacggggaaaatccgtcaaattgggtttggttcgggcgggtaaccacgagtatgggttttgttgccatg 20774741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 162
Target Start/End: Complemental strand, 48312730 - 48312684
Alignment:
Q  116 tttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagc 162  Q
    |||||||||||||||||| || | ||||||||||| |||||||||||    
T  48312730 tttaaaatcggggaaaacccaaatccaaacccaaatccaatcaaagc 48312684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 152
Target Start/End: Complemental strand, 35936896 - 35936819
Alignment:
Q  75 ggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacc 152  Q
    ||||||||| ||||| ||||||| ||||| | ||| |||| ||| |||||||||||||| || || || |||||||||    
T  35936896 ggtgggtacctatatacccgttatccgtcccatactcgtgatttgaaatcggggaaaacccaaactcatacccaaacc 35936819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 133
Target Start/End: Complemental strand, 47644961 - 47644869
Alignment:
Q  40 ttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaac 133  Q
    ||||||||||| || | || ||| |||||||||| ||| ||||||| ||| ||| ||| ||||| |||||| ||||||| | ||||||||||||    
T  47644961 ttttacattcgggacgagtatggatatgagttcggggtaggtacttctat-cccattatccgtcccgtacctgtgttttgagatcggggaaaac 47644869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 7e-36; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 39 - 228
Target Start/End: Original strand, 4920811 - 4921000
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || ||||||||||||| ||||| ||||| ||| ||||| ||||||||||||| | |||||||||||| | |||||||||||| ||||    
T  4920811 tttttacatttgggacgggtttgggtatgggttcggggtggatacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaacccata 4920910  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    |||| | ||||||||| ||||| | | ||||||||||||| |||| |||||| || | || || |||| |||||| ||||||||||||||    
T  4920911 cccataaccaaacccagtcaaaacggagaaaacccgtcaaattgggtttggttcgggcgggtaaccacgggtatgggttttgttgccatg 4921000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 39 - 228
Target Start/End: Complemental strand, 5908792 - 5908603
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || ||||||||||||| ||| | |||| |||| ||||| ||||||||||||| | |||||||||||  | |||||||||||||||||    
T  5908792 tttttacatttgggacgggtttgggtatgggtttggggtgtgtacatatatacccgttacccgtcccatacccgtgtttcgagatcggggaaaactcata 5908693  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    |||| |||||||||||||||||   ||||||||||||||| |||| |||||| || | || || |||| ||||||  |||||||||||||    
T  5908692 cccatacccaaacccaatcaaaatggggaaaacccgtcaaattgggtttggttcgggcggataaccacgggtatggattttgttgccatg 5908603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 39 - 226
Target Start/End: Complemental strand, 12866655 - 12866468
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || |||| |||||||| ||||| ||||||||| ||||| || |||||||||| | ||||| |||||| ||||||| |||||||||||    
T  12866655 tttttacatttgggacgggtatgggtatgggttcgcggtgggtacctatatacctgttacccgtcccatacccatgttttgaaatcggagaaaactcata 12866556  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgcca 226  Q
    |||| ||||||||||| |||||   ||||||||||||||| ||||||||||| ||   || || ||||| ||||| ||||||||||||    
T  12866555 cccatacccaaacccagtcaaaatggggaaaacccgtcaaattggatttggttcggacgggtaaccacatgtatgggttttgttgcca 12866468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 39 - 228
Target Start/End: Original strand, 4583104 - 4583293
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || |||| |||||||| ||| | |||||| || ||||| ||||||||||||| | |||||||||||| |||||||||||||| ||||    
T  4583104 tttttacatttgggacgggtatgggtatgggtttggggtgggaacctatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaacccata 4583203  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    |||| | ||||||||||||||| | ||||||||||||||| |||| |||||| || | || || ||   | |||||||||||||||||||    
T  4583204 cccatatccaaacccaatcaaaacggggaaaacccgtcaaattgggtttggttcgggcgggtaaccgtggatatgagttttgttgccatg 4583293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 58 - 228
Target Start/End: Complemental strand, 20973581 - 20973411
Alignment:
Q  58 tttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatc 157  Q
    |||||||||| ||||| ||||||||| ||||| |||||||||| || | ||||||||||| ||||||||||||||| |||||||| | ||||||||| ||    
T  20973581 tttgggtatgggttcggggtgggtacctatatacccgttacccatcccatacccgtgtttgaaaatcggggaaaacccatacccataaccaaacccagtc 20973482  T
Q  158 aaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    ||| | ||||||||||||||   ||| |||||| || | || || || | |||||| ||||||||||||||    
T  20973481 aaaacggggaaaacccgtcagaatgggtttggttcgggcgggtaaccgcgggtatgggttttgttgccatg 20973411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 75 - 228
Target Start/End: Complemental strand, 33728069 - 33727916
Alignment:
Q  75 ggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccg 174  Q
    ||||||||| ||||| ||||||||||||| | |||||||||||| | |||||||||||  |||||||| | ||||||||||||||| | ||||||| |||    
T  33728069 ggtgggtacctatatacccgttacccgtcccatacccgtgttttgagatcggggaaaatccatacccatatccaaacccaatcaaaacggggaaaatccg 33727970  T
Q  175 tcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    |||| |||| |||||| || | || || |||| |||||| ||||||||||||||    
T  33727969 tcaaattgggtttggttcgggcgggtaaccacgggtatgggttttgttgccatg 33727916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 58 - 178
Target Start/End: Complemental strand, 28569106 - 28568986
Alignment:
Q  58 tttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatc 157  Q
    |||||||||| ||||| ||||||||| ||||||||||||||||||| ||||||||  |||| |||||||||||||  || || || ||||||||||| ||    
T  28569106 tttgggtatgggttcggggtgggtacctatatccccgttacccgtcccgtacccgcattttgaaatcggggaaaatccaaactcatacccaaacccagtc 28569007  T
Q  158 aaagcagggaaaacccgtcaa 178  Q
    ||| |||||||||||||||||    
T  28569006 aaatcagggaaaacccgtcaa 28568986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 39 - 228
Target Start/End: Original strand, 10127066 - 10127248
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || ||||||||||||| ||||| ||||||||| |||||       ||||||| | |||||||||||| | |||||||||||| ||||    
T  10127066 tttttacatttgggacgggtttgggtatgggttcggggtgggtacctatat-------acccgtcccatacccgtgttttgagatcggggaaaacccata 10127158  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    |||| ||||||||||| ||||| | ||||||||||||||| ||||||||||| || | || || |||| ||||||  |||||||| ||||    
T  10127159 cccatacccaaacccagtcaaaacggggaaaacccgtcaaattggatttggttcgggcggataaccacgggtatggattttgttgtcatg 10127248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 39 - 228
Target Start/End: Complemental strand, 17853396 - 17853208
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || |||| |||||||| |||||  |||||||  |||||  |||||||||||| | ||||||||||| ||| ||||||||||| ||||    
T  17853396 tttttacatttgggacgggtatgggtatgggttcggagtgggtatctatatatccgttacccgtcccatacccgtgtttgaaa-tcggggaaaacccata 17853298  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
     ||| ||||||||||||||||| | ||||||||||||||| || | |||||| |  |||| || || | |||||| ||||||||||||||    
T  17853297 tccatacccaaacccaatcaaaacggggaaaacccgtcaaattaggtttggttcaggtgggtaaccgcgggtatgcgttttgttgccatg 17853208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 39 - 190
Target Start/End: Original strand, 15890192 - 15890342
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || |||| |||||||| ||||| ||||||||| ||||| ||||||||||||| | |||||||||||| ||||||| |||||| ||||    
T  15890192 tttttacatttgggacgggtatgggtatgggttcg-ggtgggtacctatatacccgttacccgtcccatacccgtgttttgaaatcggagaaaacccata 15890290  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 190  Q
    | || | ||||||| | ||||| | || |||||||||||| |||||||||||    
T  15890291 cacatagccaaacctagtcaaaacgggaaaaacccgtcaaattggatttggt 15890342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 39 - 230
Target Start/End: Complemental strand, 29246055 - 29245864
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | ||||||| |||||||| ||| | ||||||||| ||||| |  ||||  |||| | |||||||||||| ||||||| |||||||||||    
T  29246055 tttttacatttgggatgggtatgggtatgggtttggggtgggtacctatatacatgttattcgtcccatacccgtgttttgaaatcggagaaaactcata 29245956  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatgtc 230  Q
    |||| ||||||||| | ||||| | ||||||||||||||| |||  |||||| || | || || || | |||||| ||||||||| ||||||    
T  29245955 cccatacccaaacctagtcaaaacggggaaaacccgtcaaattgagtttggttcgggcgggtaaccgcgggtatgggttttgttgtcatgtc 29245864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 39 - 190
Target Start/End: Original strand, 30996581 - 30996731
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || |||||||||| || ||||| ||||||||| ||||| ||||||||| ||| | ||| |||||||||||||||| |||||| ||||    
T  30996581 tttttacatttgggacgggtttgggtgtgtgttcggggtgggtacctatatacccgttacctgtcccatactcgtgttttaaaatcggagaaaacccata 30996680  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 190  Q
    | || ||||||||||| ||||| | ||||||| ||||||| |||| ||||||    
T  30996681 ctcatacccaaacccagtcaaaac-gggaaaatccgtcaaattgggtttggt 30996731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 44 - 228
Target Start/End: Complemental strand, 6156017 - 6155835
Alignment:
Q  44 acattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaa 143  Q
    ||||| |||| || |||||||||| ||||| ||||||||| ||||| ||  ||||| |||   |||||||||||| |||||||||||||| || || ||     
T  6156017 acatttgtgacggttttgggtatgggttcggggtgggtacatatatacc--ttacctgtcctatacccgtgttttgaaatcggggaaaacccaaacacat 6155920  T
Q  144 acccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    ||||||||||| ||||| |   |||||||||| || || |||||||| || |||| || || |||||||||||||||||||||||    
T  6155919 acccaaacccagtcaaaacgaagaaaacccgttaaatttgatttggtacgggtggataaccgcaggtatgagttttgttgccatg 6155835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 17 - 133
Target Start/End: Original strand, 6810123 - 6810237
Alignment:
Q  17 aaaaagggcaataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgtt 116  Q
    |||| ||||||||||||||||  ||   |||||| |||||||||||||||| ||||| |||| |||||||||||| ||||||||||  ||||||||||||    
T  6810123 aaaaggggcaataaattgatt--ttcaccattcgggatgggtttgggtatgggttcggggtgagtacttatatcctcgttacccgttccgtacccgtgtt 6810220  T
Q  117 ttaaaatcggggaaaac 133  Q
     ||||||||||||||||    
T  6810221 ctaaaatcggggaaaac 6810237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 413 - 579
Target Start/End: Original strand, 19714034 - 19714202
Alignment:
Q  413 atgtgatctaacaaaacatttctttgataatgat--tgtttatgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatcct 510  Q
    ||||||||| || |||| ||| | ||||||||||  ||| ||| ||||||||||| |  | ||||||||||||||||||||||||| ||| ||| |||||    
T  19714034 atgtgatctgacgaaacctttatgtgataatgatcatgtgtataattacccttttgccctcatgtctatattaaacacaaggcatagaccgtgtcatcct 19714133  T
Q  511 tgtctagtttaatattgaacccatagacatttttgctgatatgtaagaagcgcaaattccatctaggtc 579  Q
    ||| ||||| |||||||  ||| ||||||||| | ||| |||||| || | ||||||||||||||||||    
T  19714134 tgtatagttcaatattgggcccgtagacatttctcctgttatgtaggaggggcaaattccatctaggtc 19714202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 43 - 207
Target Start/End: Original strand, 29664960 - 29665121
Alignment:
Q  43 tacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcataccca 142  Q
    |||||||| || |||||||||||||||||||| |||||||| |||||||||||||||| ||  ||||||||||||| |||||  ||| ||| || || ||    
T  29664960 tacattcgggacgggtttgggtatgagttcgaagtgggtacctatatccccgttacccatcatgtacccgtgttttgaaatc--ggagaacccaaactca 29665057  T
Q  143 aacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccaca 207  Q
     || ||||| |||||||||| || |||||||||||| ||| ||||||| | || || ||||||||    
T  29665058 tacacaaactcaatcaaagc-ggaaaaacccgtcaaattgaatttggttcaagcggatacccaca 29665121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 55 - 228
Target Start/End: Original strand, 40517807 - 40517980
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 154  Q
    ||||||| ||||| ||||| ||||||||  ||||| |||||||||| || | ||||||||||||   |||||||||||| |||||||| |||||||||||    
T  40517807 gggtttgagtatgggttcggggtgggtaactatatacccgttacccatcccatacccgtgttttgggatcggggaaaacccatacccatacccaaaccca 40517906  T
Q  155 atcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
     ||||| | || |||| ||||||| ||| ||||||| |  | || || |||| |||||| ||||||||||||||    
T  40517907 gtcaaaacgggaaaaatccgtcaaattgaatttggttcaggcgggtaaccacgggtatgggttttgttgccatg 40517980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 57 - 230
Target Start/End: Complemental strand, 40187742 - 40187570
Alignment:
Q  57 gtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaat 156  Q
    ||||||||||||||| | ||||  ||| |||||| ||||||||||||||| ||||||||||| |||| ||||||||| || || ||   ||||||||| |    
T  40187742 gtttgggtatgagtttg-ggtgaatacctatatctccgttacccgtctcgcacccgtgttttgaaattggggaaaacccaaactcatttccaaacccagt 40187644  T
Q  157 caaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatgtc 230  Q
    ||||||  ||||||||||||||  ||  |||||| ||   || ||||| ||||||||||||||| |||||||||    
T  40187643 caaagcgaggaaaacccgtcaaaatgagtttggttcggacgggtacccgcaggtatgagttttgctgccatgtc 40187570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 64 - 223
Target Start/End: Complemental strand, 16311372 - 16311213
Alignment:
Q  64 tatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagca 163  Q
    |||| ||||| ||||||||| |||||||| |||| ||||||||||| |||||||| |||||||  |||||||| || || | |||||||||||||||||     
T  16311372 tatgggttcggggtgggtacctatatccctgttatccgtctcgtactcgtgttttgaaatcggaaaaaactcaaactcatatccaaacccaatcaaagcg 16311273  T
Q  164 gggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttg 223  Q
    || |||| ||||||| || | |||||| |  | || ||||| | | ||||||||||||||    
T  16311272 ggaaaaaaccgtcaaattaggtttggttcaggcgggtacccgcggatatgagttttgttg 16311213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 107 - 230
Target Start/End: Original strand, 39422399 - 39422522
Alignment:
Q  107 tacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccac 206  Q
    |||||||||||| |||||| | ||||| || || || | ||||||||||||||||| ||||||||| ||||| |||| | |||| || | || |||||||    
T  39422399 tacccgtgttttgaaatcgagaaaaacccaaactcatatccaaacccaatcaaagcggggaaaacctgtcaatttgggtgtggttcgggcggttacccac 39422498  T
Q  207 aggtatgagttttgttgccatgtc 230  Q
    ||||||||| ||||||||||||||    
T  39422499 aggtatgagctttgttgccatgtc 39422522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 39 - 229
Target Start/End: Complemental strand, 22695005 - 22694816
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || ||||||||||||| ||||| ||||||||| | ||| |||||||  |||| | ||||||| |||| | ||||||| |||| ||||    
T  22695005 tttttacatttgggacgggtttgggtatgggttcggggtgggtacctctatacccgttagtcgtcccatacccgtattttgagatcgggg-aaacccata 22694907  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatgt 229  Q
    |||| ||||||||||| | ||| | || |||  ||||||| |||| |||||| || | || || |||| |||||| |||||||||||||||    
T  22694906 cccatacccaaacccagttaaaacgggaaaattccgtcaaattgggtttggttcgggcgggtaaccacgggtatgggttttgttgccatgt 22694816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 39 - 227
Target Start/End: Complemental strand, 12834678 - 12834490
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || |||| |||||||| ||||| ||| ||||| ||||| || |||||||||| | || || |||||| |||| || |||||| ||||    
T  12834678 tttttacatttgggacgggtatgggtatgggttcggggtaggtacctatatacctgttacccgtcccatatccatgttttgaaattggagaaaacccata 12834579  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccat 227  Q
    |||| ||||||||||| |||||   ||||||||||||||| |||  |||||| ||   || || ||||| ||||| |||||||| ||||    
T  12834578 cccatacccaaacccagtcaaaatggggaaaacccgtcaaattgagtttggttcggacgggtaaccacatgtatgggttttgttaccat 12834490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 76 - 228
Target Start/End: Complemental strand, 13402071 - 13401919
Alignment:
Q  76 gtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgt 175  Q
    |||||||| || || ||||||||||||  | ||||||||||| ||||||||| |||||||||||||| ||||||||| | ||||| | |  |||| ||||    
T  13402071 gtgggtacctaaatacccgttacccgttccatacccgtgtttgaaaatcgggaaaaactcatacccatacccaaacctagtcaaaacggaaaaaatccgt 13401972  T
Q  176 caacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
    ||| |||| |||||| || | || || || | |||||| ||||||||||||||    
T  13401971 caaattgggtttggttcgggcgggtaaccgcgggtatgggttttgttgccatg 13401919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 38 - 178
Target Start/End: Complemental strand, 23045096 - 23044956
Alignment:
Q  38 ctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcat 137  Q
    |||| |||||||| |  |||||| |||||| ||||| ||||||||| |||||| ||||||||| || ||||||||| |||| ||||||||||||||  |     
T  23045096 ctttctacattcgggtagggttttggtatgggttcggggtgggtacatatatctccgttacccatcccgtacccgtattttgaaatcggggaaaacctaa 23044997  T
Q  138 acccaaacccaaacccaatcaaagcagggaaaacccgtcaa 178  Q
    ||||| |||||||| || |||||   || ||||||||||||    
T  23044996 acccatacccaaactcagtcaaattgggaaaaacccgtcaa 23044956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 55 - 178
Target Start/End: Original strand, 2681217 - 2681340
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 154  Q
    ||||||||||||| ||||| ||||| |||| |||||||| |||||| || |||||| || |||| |||||||||||||| || || ||  ||||||| ||    
T  2681217 gggtttgggtatgggttcggggtggatactcatatccccattacccatcccgtacctgtattttgaaatcggggaaaacccaaactcatgcccaaactca 2681316  T
Q  155 atcaaagcagggaaaacccgtcaa 178  Q
     ||||| | |||||||||||||||    
T  2681317 gtcaaatcggggaaaacccgtcaa 2681340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 39 - 190
Target Start/End: Complemental strand, 42987583 - 42987432
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || ||||||||||||| ||||| | ||||||| |||||  ||||||| |||| | |||||||||||| | |||||||||||  ||||    
T  42987583 tttttacatttgggacgggtttgggtatgggttcgggatgggtacctatatatccgttacacgtcccatacccgtgttttgagatcggggaaaatccata 42987484  T
Q  139 cccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 190  Q
    |||  |||||||| || ||||| | || |||||||| ||| ||| |||||||    
T  42987483 cccgtacccaaactcagtcaaaacgggaaaaacccgccaaattgaatttggt 42987432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 55 - 133
Target Start/End: Complemental strand, 12712645 - 12712567
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaac 133  Q
    ||||||||||||| ||||||||||||||| |||||| |||||| ||||| ||||||||| |||| ||||||| ||||||    
T  12712645 gggtttgggtatgggttcgaggtgggtacatatatctccgttatccgtcccgtacccgtattttgaaatcggagaaaac 12712567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 43 - 228
Target Start/End: Original strand, 18207008 - 18207192
Alignment:
Q  43 tacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcataccca 142  Q
    |||||||| || |||||||  |||| ||||| ||||||||| ||||| || |||||| ||| | ||| || ||||| |||||| ||||||| || || ||    
T  18207008 tacattcgggacgggtttgaatatgggttcg-ggtgggtacctatatacctgttacctgtcccatacacgagttttgaaatcgaggaaaacccaaactca 18207106  T
Q  143 aacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
      |||||||||| ||||| | || ||||| |||||| |||| ||||||  | |||| || |||| |||||||||||||||||||||    
T  18207107 tgcccaaacccagtcaaaacgggaaaaacacgtcaaattgggtttggtttgggtgggtaaccacgggtatgagttttgttgccatg 18207192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 413 - 579
Target Start/End: Original strand, 19706755 - 19706923
Alignment:
Q  413 atgtgatctaacaaaacatttctttgataatgat--tgtttatgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatcct 510  Q
    ||||||||| |  |||| ||||| ||||||||||  ||| ||| ||||||||||| |  | ||||||||||| |||||||| |||| ||| |||  ||||    
T  19706755 atgtgatctgatgaaacctttctgtgataatgatcatgtgtataattacccttttgccctcatgtctatattgaacacaagccatagaccgtgtcgtcct 19706854  T
Q  511 tgtctagtttaatattgaacccatagacatttttgctgatatgtaagaagcgcaaattccatctaggtc 579  Q
    ||||||||| |||||||  ||| ||||||||| | ||| |||||| || | ||||||| ||||||||||    
T  19706855 tgtctagttcaatattgggcccgtagacatttctcctgttatgtaggaggggcaaatttcatctaggtc 19706923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 413 - 555
Target Start/End: Original strand, 24701758 - 24701902
Alignment:
Q  413 atgtgatctaacaaaacatttctttgataatgat--tgtttatgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatcct 510  Q
    ||||||||| || |||| ||||| ||||||||||  ||| ||| ||||||||||| |  | ||||||||||| ||||||||||||| ||| ||  |||||    
T  24701758 atgtgatctgacgaaacctttctgtgataatgatcatgtgtataattacccttttgccctcatgtctatattgaacacaaggcatagaccgtgccatcct 24701857  T
Q  511 tgtctagtttaatattgaacccatagacatttttgctgatatgta 555  Q
    ||||||||| |||||||  ||| ||||||||| | ||| ||||||    
T  24701858 tgtctagttcaatattgggcccgtagacatttctcctgttatgta 24701902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 107 - 223
Target Start/End: Complemental strand, 6092565 - 6092449
Alignment:
Q  107 tacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccac 206  Q
    |||||||||||| | |||||| ||||| |||||||| ||||||||||||||||| | |||||||||||| || ||| ||||||| || | || || ||      
T  6092565 tacccgtgttttgagatcgggaaaaacccatacccatacccaaacccaatcaaaacggggaaaacccgttaaattgaatttggttcgggcgggtaaccta 6092466  T
Q  207 aggtatgagttttgttg 223  Q
     ||||||||||||||||    
T  6092465 gggtatgagttttgttg 6092449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 26 - 156
Target Start/End: Complemental strand, 27900516 - 27900388
Alignment:
Q  26 aataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcg 125  Q
    ||||||||||||  || |||||||| |  || |||||||||| ||||||| ||||||| ||||||| | ||||||||| | ||||| |||||| ||||||    
T  27900516 aataaattgatt--ttatacattcggggcggatttgggtatgggttcgagatgggtacctatatccacattacccgtcccatacccatgttttgaaatcg 27900419  T
Q  126 gggaaaactcatacccaaacccaaacccaat 156  Q
    || |||||||| ||| | | |||||||||||    
T  27900418 ggaaaaactcaaacctatatccaaacccaat 27900388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 122
Target Start/End: Complemental strand, 35194089 - 35194010
Alignment:
Q  43 tacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaa 122  Q
    |||||||| || ||||||| ||||||||| | ||||||||| ||||| ||||||||||||| | ||||||||||||||||    
T  35194089 tacattcgggacgggtttgagtatgagtttggggtgggtacctatatacccgttacccgtcccatacccgtgttttaaaa 35194010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 55 - 133
Target Start/End: Complemental strand, 12773909 - 12773831
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaac 133  Q
    ||||||| ||||| ||||||||||||||| |||||| |||||| ||||| ||||||||| |||| ||||||| ||||||    
T  12773909 gggtttgagtatgggttcgaggtgggtacatatatctccgttatccgtcccgtacccgtattttgaaatcggagaaaac 12773831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 413 - 555
Target Start/End: Original strand, 24694994 - 24695138
Alignment:
Q  413 atgtgatctaacaaaacatttctttgataatgat--tgtttatgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatcct 510  Q
    ||||||||| || |||| ||||| ||||||||||  ||| ||| ||||||||||| |  | ||||||||||| ||||||||||||| ||| |   |||||    
T  24694994 atgtgatctgacgaaacctttctgtgataatgatcatgtgtataattacccttttgccctcatgtctatattgaacacaaggcatagaccgttccatcct 24695093  T
Q  511 tgtctagtttaatattgaacccatagacatttttgctgatatgta 555  Q
    ||||||||| |||||||  ||| ||||||||| | ||| ||||||    
T  24695094 tgtctagttcaatattgggcccgtagacatttctcctgttatgta 24695138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 55 - 135
Target Start/End: Original strand, 8020616 - 8020696
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactc 135  Q
    ||||||| ||||||||||||| || |||| |||||||| ||||||| |   ||||||||||||| ||||||||||||||||    
T  8020616 gggtttgcgtatgagttcgagatgagtacctatatccctgttacccattcagtacccgtgttttgaaatcggggaaaactc 8020696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 38 - 102
Target Start/End: Complemental strand, 18116611 - 18116547
Alignment:
Q  38 ctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgt 102  Q
    ||||||||||||| |  ||||||||||||||||||| ||||| ||| ||||||||||||||||||    
T  18116611 ctttttacattcgggtagggtttgggtatgagttcggggtggatacatatatccccgttacccgt 18116547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 38 - 102
Target Start/End: Original strand, 43523743 - 43523807
Alignment:
Q  38 ctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgt 102  Q
    ||||||||||||| |  ||||||||||||||||||| ||||| ||| ||||||||||||||||||    
T  43523743 ctttttacattcgggtagggtttgggtatgagttcggggtggatacatatatccccgttacccgt 43523807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 111 - 190
Target Start/End: Complemental strand, 3564770 - 3564692
Alignment:
Q  111 cgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 190  Q
    |||||||| ||||||| |||||  |||||||| ||||||||||| ||||| | ||||||||||||||| |||||||||||    
T  3564770 cgtgttttgaaatcggagaaaatccatacccatacccaaacccagtcaaaac-gggaaaacccgtcaaattggatttggt 3564692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 107 - 229
Target Start/End: Original strand, 24207737 - 24207858
Alignment:
Q  107 tacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtc-aacttggatttggtccgagtggctaccca 205  Q
    |||| ||||||| ||||||||||||||||| ||||| |||||||| |||||||||| |||||||  |||| ||||| | |||||| || |||| |||||     
T  24207737 tacctgtgttttgaaatcggggaaaactcaaacccatacccaaactcaatcaaagc-gggaaaaatcgtcaaacttag-tttggttcgggtgggtacccg 24207834  T
Q  206 caggtatgagttttgttgccatgt 229  Q
    | ||||||  ||||||||||||||    
T  24207835 cgggtatggattttgttgccatgt 24207858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 63 - 228
Target Start/End: Original strand, 6369705 - 6369869
Alignment:
Q  63 gtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagc 162  Q
    ||||| ||||| ||||||||| ||||| | |||||||| || | ||| ||| |||| ||||| |||||||||||||||||  ||||||| |||||||| |    
T  6369705 gtatgggttcggggtgggtacatatatacacgttaccc-tcccatactcgtattttgaaatcagggaaaactcatacccatgcccaaactcaatcaaaac 6369803  T
Q  163 agggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatg 228  Q
      | |||| ||||||| || | |||||| |||| || || ||| |  |||||||||||||| ||||    
T  6369804 gagaaaaaaccgtcaaattaggtttggttcgagcgggtaaccataaatatgagttttgttgtcatg 6369869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 133
Target Start/End: Complemental strand, 10822608 - 10822536
Alignment:
Q  61 gggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaac 133  Q
    ||||||| ||||| ||||||||| |||| ||||||||||||||   |||||||||||| ||||||| ||||||    
T  10822608 gggtatgggttcggggtgggtacatataaccccgttacccgtcctatacccgtgttttgaaatcggagaaaac 10822536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 133
Target Start/End: Complemental strand, 18451964 - 18451895
Alignment:
Q  64 tatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaac 133  Q
    |||||||||| ||||||||||||||||   |||||  |||||||||| || |||| ||||||||||||||    
T  18451964 tatgagttcggggtgggtacttatatctgtgttacatgtctcgtacctgtattttcaaatcggggaaaac 18451895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 151
Target Start/End: Original strand, 20634186 - 20634279
Alignment:
Q  58 tttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaac 151  Q
    |||||||||| ||||| |||| || | ||||||||  ||||||||||| || |||| ||||||||| |||||||||| | || || ||||||||    
T  20634186 tttgggtatgggttcggggtgagtgcatatatccctattacccgtctcatatccgtattttaaaattggggaaaactgaaactcatacccaaac 20634279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 151
Target Start/End: Original strand, 20650300 - 20650393
Alignment:
Q  58 tttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaac 151  Q
    |||||||||| ||||| |||| || | ||||||||  ||||||||||| || |||| ||||||||| |||||||||| | || || ||||||||    
T  20650300 tttgggtatgggttcggggtgagtgcatatatccctattacccgtctcatatccgtattttaaaattggggaaaactgaaactcatacccaaac 20650393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 160
Target Start/End: Original strand, 28045641 - 28045761
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || |||| |||||||| ||||| ||||||||| ||||| ||||||||||||| | ||  |||||||| || | ||| ||||| ||||    
T  28045641 tttttacatttgggacgggtatgggtatgggttcg-ggtgggtacctatatacccgttacccgtcccatattcgtgttttgaattagggaaaaacccata 28045739  T
Q  139 cccaaacccaaacccaatcaaa 160  Q
    |||| ||| |||| || |||||    
T  28045740 cccatacctaaacacagtcaaa 28045761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 195
Target Start/End: Complemental strand, 32575026 - 32574885
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 154  Q
    |||||||||| || ||||| | ||||||| |||||||  ||||||| || |||| | ||||||| |||||||||||||| || |||    ||||||||||    
T  32575026 gggtttgggtttgggttcgggatgggtacatatatccatgttacccatcccgtatctgtgttttgaaatcggggaaaacccaaacctgtccccaaaccca 32574927  T
Q  155 -atcaaagcagggaaaacccgtcaacttggatttggtccgag 195  Q
      ||||||| || |||||| |||||  |||||||||| ||||    
T  32574926 ggtcaaagcgggaaaaacctgtcaaaatggatttggttcgag 32574885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 130 - 222
Target Start/End: Complemental strand, 42717643 - 42717551
Alignment:
Q  130 aaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgtt 222  Q
    |||| |||||||| ||||||| ||| ||||| | || |||||||||||| |||| |||||| ||   || || ||||||||||||||||||||    
T  42717643 aaacccatacccatacccaaatccagtcaaaacgggaaaaacccgtcaaattgggtttggttcggacgggtaaccacaggtatgagttttgtt 42717551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 102
Target Start/End: Complemental strand, 6092622 - 6092559
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgt 102  Q
    |||||||||| | || || |||||||||| ||||| ||||||||| ||||| ||||||||||||    
T  6092622 tttttacatttgggacggatttgggtatgggttcggggtgggtacctatatacccgttacccgt 6092559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 136
Target Start/End: Original strand, 17153143 - 17153251
Alignment:
Q  26 aataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcg 125  Q
    ||||||||||||  || |||||||| || ||||||||||||| ||| | | || |||| ||||||   |||| ||||| ||||||| |||||||||||||    
T  17153143 aataaattgatt--ttctacattcgggacgggtttgggtatgggtttgggatgagtacatatatcatagttatccgtcccgtacccatgttttaaaatcg 17153240  T
Q  126 gggaaaactca 136  Q
    |  ||||||||    
T  17153241 gaaaaaactca 17153251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 229
Target Start/End: Original strand, 1218806 - 1218900
Alignment:
Q  135 catacccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccacaggtatgagttttgttgccatgt 229  Q
    |||||||| ||||||||||| |||||   |  ||||| |||||| ||||||||||| |||| || || || | |||||| |||||||||||||||    
T  1218806 catacccatacccaaacccagtcaaaatggaaaaaactcgtcaaattggatttggttcgagcgggtaaccgcgggtatgggttttgttgccatgt 1218900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 188
Target Start/End: Complemental strand, 2412762 - 2412681
Alignment:
Q  107 tacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttg 188  Q
    |||||||||||| |||| ||| |||| ||| ||||| |||||||| ||||||||   ||||||| ||||||| ||| |||||    
T  2412762 tacccgtgttttgaaattgggaaaaattcaaacccatacccaaactcaatcaaaatggggaaaatccgtcaaattgaatttg 2412681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 190
Target Start/End: Original strand, 12457596 - 12457641
Alignment:
Q  145 cccaaacccaatcaaagcagggaaaacccgtcaacttggatttggt 190  Q
    |||||||||||||||||| |||||| |||||||| |||| ||||||    
T  12457596 cccaaacccaatcaaagcggggaaaccccgtcaaattgggtttggt 12457641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390 (Bit Score: 63; Significance: 7e-27; HSPs: 2)
Name: scaffold0390
Description:

Target: scaffold0390; HSP #1
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 413 - 580
Target Start/End: Original strand, 6470 - 6639
Alignment:
Q  413 atgtgatctaacaaaacatttctttgataatgat--tgtttatgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatcct 510  Q
    ||||||||| || |||| ||||| ||||||||||  ||| ||| ||||||||||| |  | ||||||||||| ||||||||||||| ||| ||| |||||    
T  6470 atgtgatctgacgaaacctttctgtgataatgatcatgtgtataattacccttttgccctcatgtctatattgaacacaaggcatagaccgtgtcatcct 6569  T
Q  511 tgtctagtttaatattgaacccatagacatttttgctgatatgtaagaagcgcaaattccatctaggtca 580  Q
    ||||||||| |||||||  ||||||||||||| | ||| |||||| || |  ||||||||||||||||||    
T  6570 tgtctagttcaatattgggcccatagacatttctcctgttatgtaggagggacaaattccatctaggtca 6639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #2
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 413 - 580
Target Start/End: Original strand, 13486 - 13655
Alignment:
Q  413 atgtgatctaacaaaacatttctttgataatgat--tgtttatgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatcct 510  Q
    ||||||||| || |||| ||||| ||||||||||  ||| ||| ||||||||||| |  | ||||||||||| ||||||||||||| ||| ||| |||||    
T  13486 atgtgatctgacgaaacctttctgtgataatgatcatgtgtataattacccttttgccctcatgtctatattgaacacaaggcatagaccgtgtcatcct 13585  T
Q  511 tgtctagtttaatattgaacccatagacatttttgctgatatgtaagaagcgcaaattccatctaggtca 580  Q
    ||||| ||| |||||||  ||| ||||||||| | ||| |||||| || |  ||||||||||||||||||    
T  13586 tgtcttgttcaatattgggcccgtagacatttctcctgttatgtaggagggacaaattccatctaggtca 13655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 63; Significance: 7e-27; HSPs: 2)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 413 - 580
Target Start/End: Original strand, 1857 - 2026
Alignment:
Q  413 atgtgatctaacaaaacatttctttgataatgat--tgtttatgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatcct 510  Q
    ||||||||| || |||| ||||| ||||||||||  ||| ||| ||||||||||| |  | ||||||||||| ||||||||||||| ||| ||| |||||    
T  1857 atgtgatctgacgaaacctttctgtgataatgatcatgtgtataattacccttttgccctcatgtctatattgaacacaaggcatagaccgtgtcatcct 1956  T
Q  511 tgtctagtttaatattgaacccatagacatttttgctgatatgtaagaagcgcaaattccatctaggtca 580  Q
    ||||||||| |||||||  ||| ||||||||| | ||| |||||| || | |||||||||||||||||||    
T  1957 tgtctagttcaatattgggcccgtagacatttctcctgttatgtaggaggggcaaattccatctaggtca 2026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #2
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 413 - 580
Target Start/End: Original strand, 10748 - 10917
Alignment:
Q  413 atgtgatctaacaaaacatttctttgataatgat--tgtttatgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatcct 510  Q
    ||||||||| || |||| ||||| ||||||||||  ||| ||| ||||||||||| |  | ||||||||||| ||||||||||||| ||| ||| |||||    
T  10748 atgtgatctgacgaaacctttctgtgataatgatcatgtgtataattacccttttgccctcatgtctatattgaacacaaggcatagaccgtgtcatcct 10847  T
Q  511 tgtctagtttaatattgaacccatagacatttttgctgatatgtaagaagcgcaaattccatctaggtca 580  Q
    ||||||||| |||||||  ||| ||||||||| | ||| |||||| || | |||||||||||||||||||    
T  10848 tgtctagttcaatattgggcccgtagacatttctcctgttatgtaggaggggcaaattccatctaggtca 10917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 59; Significance: 2e-24; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 57 - 155
Target Start/End: Original strand, 33396 - 33494
Alignment:
Q  57 gtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaa 155  Q
    ||||||||||| ||||| ||||||||| ||||| ||||||||||||| | |||||||||||| |||||||||||||| || ||||| ||||||||||||    
T  33396 gtttgggtatgggttcggggtgggtacatatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaa 33494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 56; Significance: 1e-22; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 57 - 160
Target Start/End: Original strand, 211367 - 211470
Alignment:
Q  57 gtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaat 156  Q
    ||||||||||| ||||| ||||||||| |||||||| |||||||||||||||||||| |||| ||||||| |||||| || ||||| |||||||| || |    
T  211367 gtttgggtatgggttcggggtgggtacatatatccctgttacccgtctcgtacccgtattttgaaatcggagaaaacccaaacccatacccaaactcagt 211466  T
Q  157 caaa 160  Q
    ||||    
T  211467 caaa 211470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0433 (Bit Score: 55; Significance: 4e-22; HSPs: 1)
Name: scaffold0433
Description:

Target: scaffold0433; HSP #1
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 413 - 580
Target Start/End: Complemental strand, 7778 - 7609
Alignment:
Q  413 atgtgatctaacaaaacatttctttgataatgat--tgtttatgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatcct 510  Q
    ||||||||| || |||| ||||| ||||||||||  ||| ||| ||||||||||| |  | ||| ||||||| ||||||||||||| ||| ||| |||||    
T  7778 atgtgatctgacgaaacctttctgtgataatgatcatgtgtataattacccttttgccctcatgcctatattgaacacaaggcatagaccgtgtcatcct 7679  T
Q  511 tgtctagtttaatattgaacccatagacatttttgctgatatgtaagaagcgcaaattccatctaggtca 580  Q
    ||||||||| |||||||  ||  ||||||||| | ||| |||||| || | |||||||||||||||||||    
T  7678 tgtctagttcaatattgggcctgtagacatttctcctgttatgtaggaggggcaaattccatctaggtca 7609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 54; Significance: 2e-21; HSPs: 3)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 413 - 575
Target Start/End: Original strand, 229927 - 230091
Alignment:
Q  413 atgtgatctaacaaaacatttctttgataatgat--tgtttatgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatcct 510  Q
    ||||||||| || |||||||| | ||||||||||  ||| ||| ||||||||||| |  | ||||||||||| |||||||| |||| ||||||| |||||    
T  229927 atgtgatctgacgaaacatttatgtgataatgatcatgtgtataattacccttttgcccttatgtctatattgaacacaagacataaaccatgtcatcct 230026  T
Q  511 tgtctagtttaatattgaacccatagacatttttgctgatatgtaagaagcgcaaattccatcta 575  Q
    ||||||||| |||||||  ||| ||||||||| | ||| |||||| || | || |||||||||||    
T  230027 tgtctagttcaatattgggcccgtagacatttctcctgttatgtaggaggggcgaattccatcta 230091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 55 - 178
Target Start/End: Original strand, 67750 - 67873
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 154  Q
    ||||||||||||  | ||| ||||||||| ||||||||||||| ||||| |||| |||| ||||||||||||||||||  || ||||| || ||||||||    
T  67750 gggtttgggtataggctcggggtgggtacatatatccccgttatccgtcccgtatccgtattttaaaatcggggaaaatccaaacccatactcaaaccca 67849  T
Q  155 atcaaagcagggaaaacccgtcaa 178  Q
     ||||| | ||||||||| |||||    
T  67850 gtcaaatcggggaaaacctgtcaa 67873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 55 - 178
Target Start/End: Original strand, 75593 - 75716
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 154  Q
    ||||||||||||  | ||| ||||||||| ||||||||||||| ||||| |||| |||| ||||||||||||||||||  || ||||| || ||||||||    
T  75593 gggtttgggtataggctcggggtgggtacatatatccccgttatccgtcccgtatccgtattttaaaatcggggaaaatccaaacccatactcaaaccca 75692  T
Q  155 atcaaagcagggaaaacccgtcaa 178  Q
     ||||| | ||||||||| |||||    
T  75693 gtcaaatcggggaaaacctgtcaa 75716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 53; Significance: 6e-21; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 431 - 580
Target Start/End: Complemental strand, 18940 - 18789
Alignment:
Q  431 tttctttgataatgat--tgtttatgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatccttgtctagtttaatattga 528  Q
    ||||| ||||||||||  ||| ||| ||||||||||| |  | ||||||||||| ||||||||||||| ||| ||| |||||||||| ||| |||||||     
T  18940 tttctgtgataatgatcatgtgtataattacccttttgccctcatgtctatattgaacacaaggcatagaccgtgtcatccttgtctcgttcaatattgg 18841  T
Q  529 acccatagacatttttgctgatatgtaagaagcgcaaattccatctaggtca 580  Q
     ||| ||||||||| | ||| |||||| || | |||||||||||||||||||    
T  18840 gcccgtagacatttctcctgttatgtaggaggggcaaattccatctaggtca 18789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 51; Significance: 1e-19; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 413 - 580
Target Start/End: Original strand, 25526 - 25695
Alignment:
Q  413 atgtgatctaacaaaacatttctttgataatgattgttt--atgattaccctttttctttaatgtctatattaaacacaaggcatacaccatgtgatcct 510  Q
    ||||||||| || |||| ||| | ||||||||||| | |  || ||||||||||| |  | ||||||||||| ||||||||||||| ||||||| |||||    
T  25526 atgtgatctgacgaaacctttatgtgataatgattatatgtataattacccttttgccctcatgtctatattgaacacaaggcatagaccatgtcatcct 25625  T
Q  511 tgtctagtttaatattgaacccatagacatttttgctgatatgtaagaagcgcaaattccatctaggtca 580  Q
    ||||||||| |||||||  ||| ||||||||| | ||| || ||| || | || ||||||||||||||||    
T  25626 tgtctagttcaatattgggcccgtagacatttctcctgttacgtaggaggggcgaattccatctaggtca 25695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 48; Significance: 6e-18; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 107 - 230
Target Start/End: Complemental strand, 14218 - 14096
Alignment:
Q  107 tacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccgagtggctacccac 206  Q
    ||||||||||||||| |||||||||||||| || || |||||||||||| |||| | || |||||||||||| |||| ||||||  | |||| || ||||    
T  14218 tacccgtgttttaaa-tcggggaaaactcaaactcatacccaaacccaaacaaaacgggaaaaacccgtcaaattgggtttggtttgggtgggtaaccac 14120  T
Q  207 aggtatgagttttgttgccatgtc 230  Q
      ||||||||||||||| ||||||    
T  14119 gagtatgagttttgttgtcatgtc 14096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 58 - 148
Target Start/End: Original strand, 90601 - 90691
Alignment:
Q  58 tttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaaccca 148  Q
    |||| ||||| ||||| || ||||||  |||| ||||||| ||||||| |||||||||||| |||||||||||||| ||||||||||||||    
T  90601 tttgtgtatgggttcggggagggtaccaatatacccgttaaccgtctcatacccgtgttttgaaatcggggaaaacccatacccaaaccca 90691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 46; Significance: 9e-17; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 55 - 160
Target Start/End: Original strand, 2970 - 3075
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 154  Q
    ||||||| ||||| ||||| ||||||||| |||||||| |||| |||||  |||||||| |||| |||||||||||||| || || || |||||||||||    
T  2970 gggtttgagtatgggttcggggtgggtacatatatcccagttatccgtcctgtacccgtattttgaaatcggggaaaacccaaactcatacccaaaccca 3069  T
Q  155 atcaaa 160  Q
     |||||    
T  3070 gtcaaa 3075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 26 - 132
Target Start/End: Complemental strand, 20853 - 20749
Alignment:
Q  26 aataaattgattctttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcg 125  Q
    ||||||||||||  |||||||||||  | ||||||| ||||| ||||||||||| || |||||||||| ||||||||||| ||| || ||||| ||||||    
T  20853 aataaattgatt--ttttacattcggaacgggtttgagtatgggttcgaggtggatatttatatccccattacccgtctcatactcgagttttgaaatcg 20756  T
Q  126 gggaaaa 132  Q
    || ||||    
T  20755 ggaaaaa 20749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 55 - 160
Target Start/End: Complemental strand, 128208 - 128103
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaaccca 154  Q
    ||||||||||||| ||||| ||||||||| ||||||||| ||||||||| ||||||||| || | |||| ||  ||||| || || || || ||||||||    
T  128208 gggtttgggtatgggttcggggtgggtacatatatccccattacccgtcccgtacccgtattatgaaattggaaaaaacccaaactcatactcaaaccca 128109  T
Q  155 atcaaa 160  Q
    ||||||    
T  128108 atcaaa 128103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 113
Target Start/End: Complemental strand, 105556 - 105498
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgt 113  Q
    ||||||||||||| ||||| ||||||||| |||||||| |||||||||| |||||||||    
T  105556 gggtttgggtatgggttcggggtgggtacatatatccctgttacccgtcccgtacccgt 105498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 41; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 64 - 172
Target Start/End: Complemental strand, 107469 - 107361
Alignment:
Q  64 tatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagca 163  Q
    |||||||||| ||||||||||||||||   | |||||||| | |||| ||||||| |||||| | |||||||| ||| | ||| ||||||||||||||      
T  107469 tatgagttcggggtgggtacttatatctatgctacccgtcccatacctgtgttttgaaatcgagaaaaactcaaacctatacctaaacccaatcaaagtg 107370  T
Q  164 gggaaaacc 172  Q
    |||||||||    
T  107369 gggaaaacc 107361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 38; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 475 - 580
Target Start/End: Complemental strand, 6129 - 6024
Alignment:
Q  475 tctatattaaacacaaggcatacaccatgtgatccttgtctagtttaatattgaacccatagacatttttgctgatatgtaagaagcgcaaattccatct 574  Q
    |||||||| ||||||||||||| | | | | |||||||||||||| ||||||   ||| ||||||||| | ||| |||||| || | |||||||||||||    
T  6129 tctatattgaacacaaggcatagatcgtctcatccttgtctagttgaatatttggcccgtagacatttctcctgttatgtaggaggggcaaattccatct 6030  T
Q  575 aggtca 580  Q
    ||||||    
T  6029 aggtca 6024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 136
Target Start/End: Original strand, 16969 - 17049
Alignment:
Q  56 ggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactca 136  Q
    ||||||| |||||||||| ||||||||| ||||||||||| ||||||| | ||| ||| |||| |||||||| ||| ||||    
T  16969 ggtttggatatgagttcggggtgggtacatatatccccgtcacccgtcccatacacgtattttgaaatcgggaaaagctca 17049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 178
Target Start/End: Original strand, 14900 - 14972
Alignment:
Q  107 tacccgtgttttaaaatcggggaaaactcatacccaaaccc-aaacccaatcaaagcagggaaaacccgtcaa 178  Q
    |||||||||||| |||||||||||||| || || || |||| ||||||||||||||| | |||||||||||||    
T  14900 tacccgtgttttgaaatcggggaaaacccaaactcataccctaaacccaatcaaagcggagaaaacccgtcaa 14972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 113
Target Start/End: Original strand, 70096 - 70154
Alignment:
Q  55 gggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgt 113  Q
    ||||||||||||| ||| | ||||||||| ||||||| ||||||||||| |||||||||    
T  70096 gggtttgggtatgggtttggggtgggtacatatatcctcgttacccgtcccgtacccgt 70154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 162
Target Start/End: Original strand, 449764 - 449810
Alignment:
Q  116 tttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagc 162  Q
    |||||||||||||||||| || ||||||||||||||||| |||||||    
T  449764 tttaaaatcggggaaaacccaaacccaaacccaaacccagtcaaagc 449810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 228
Target Start/End: Original strand, 7738 - 7870
Alignment:
Q  95 ttacccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaacttggatttggtccga 194  Q
    ||||||||||| |||||||||||| |||| || ||||| ||  || || |||||||| |||||||| | ||||||||||||||| ||  |||| || ||     
T  7738 ttacccgtctcatacccgtgttttgaaattggagaaaa-tctaacacatacccaaactcaatcaaaacggggaaaacccgtcaaattaaatttagttcgg 7836  T
Q  195 gtggctacccacaggtatgagttttgttgccatg 228  Q
    |||| || |||| ||||||  |||||||| ||||    
T  7837 gtgggtaaccacgggtatggattttgttggcatg 7870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 146
Target Start/End: Original strand, 10282 - 10388
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcggggaaaactcata 138  Q
    |||||||||| | || |||| |||||||| |||||  |||||||| ||||| || |||| ||||| | |||||||||||  ||| | |||||||| ||||    
T  10282 tttttacatttgggacgggtatgggtatgggttcgtagtgggtacctatatacctgttatccgtcccatacccgtgtttggaaagc-gggaaaacccata 10380  T
Q  139 cccaaacc 146  Q
    ||||||||    
T  10381 cccaaacc 10388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 125
Target Start/End: Original strand, 4243 - 4329
Alignment:
Q  39 tttttacattcgtgatgggtttgggtatgagttcgaggtgggtacttatatccccgttacccgtctcgtacccgtgttttaaaatcg 125  Q
    |||||||||| | || | ||||||||||| ||| || ||||||||  |||| | ||||||| ||||| |||||||||||| ||||||    
T  4243 tttttacatttgggacgagtttgggtatgggtttgaagtgggtacaaatatactcgttaccagtctcatacccgtgttttgaaatcg 4329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0795 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0795
Description:

Target: scaffold0795; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 178
Target Start/End: Original strand, 267 - 348
Alignment:
Q  97 acccgtctcgtacccgtgttttaaaatcggggaaaactcatacccaaacccaaacccaatcaaagcagggaaaacccgtcaa 178  Q
    ||||||| | |||||||||||| | || | |||||||| ||||||| |||||||| || ||||| | | |||||||||||||    
T  267 acccgtcccatacccgtgttttgagattgaggaaaactgatacccatacccaaactcagtcaaaacggagaaaacccgtcaa 348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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