View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19342_low_5 (Length: 531)

Name: NF19342_low_5
Description: NF19342
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19342_low_5
NF19342_low_5
[»] chr8 (30 HSPs)
chr8 (31-273)||(9244058-9244300)
chr8 (31-268)||(26364739-26364973)
chr8 (31-265)||(521983-522214)
chr8 (31-263)||(30644591-30644819)
chr8 (50-263)||(30640801-30641013)
chr8 (50-266)||(20308923-20309139)
chr8 (50-266)||(21095556-21095772)
chr8 (50-266)||(9245333-9245550)
chr8 (50-266)||(41636831-41637047)
chr8 (56-264)||(34642667-34642874)
chr8 (50-266)||(43584408-43584624)
chr8 (53-268)||(20309956-20310172)
chr8 (53-268)||(21096589-21096805)
chr8 (65-267)||(41638070-41638271)
chr8 (50-267)||(26366096-26366313)
chr8 (31-276)||(34643848-34644087)
chr8 (52-263)||(43585849-43586059)
chr8 (164-268)||(31202964-31203068)
chr8 (178-266)||(3714550-3714638)
chr8 (178-266)||(43134079-43134167)
chr8 (178-268)||(3713061-3713149)
chr8 (50-129)||(22012274-22012353)
chr8 (55-110)||(31203071-31203126)
chr8 (50-129)||(22013161-22013240)
chr8 (198-266)||(22012157-22012225)
chr8 (52-123)||(3714443-3714514)
chr8 (198-266)||(22013289-22013357)
chr8 (52-123)||(3713185-3713256)
chr8 (56-94)||(43133976-43134014)
chr8 (62-131)||(20066208-20066277)
[»] chr7 (61 HSPs)
chr7 (31-266)||(29186664-29186899)
chr7 (50-266)||(43113674-43113890)
chr7 (50-271)||(19217622-19217843)
chr7 (20-276)||(9391509-9391765)
chr7 (31-266)||(18788443-18788678)
chr7 (50-273)||(44417450-44417673)
chr7 (49-263)||(3537429-3537642)
chr7 (56-268)||(27072562-27072774)
chr7 (56-268)||(27205539-27205751)
chr7 (48-272)||(48792437-48792661)
chr7 (50-266)||(29187932-29188148)
chr7 (50-266)||(48793418-48793634)
chr7 (50-267)||(13750538-13750755)
chr7 (50-271)||(18787143-18787364)
chr7 (21-266)||(43962442-43962687)
chr7 (56-266)||(7011633-7011844)
chr7 (56-266)||(7026991-7027202)
chr7 (50-266)||(13597144-13597359)
chr7 (50-266)||(44420425-44420640)
chr7 (50-269)||(45399912-45400131)
chr7 (50-266)||(9392717-9392933)
chr7 (57-266)||(32519658-32519867)
chr7 (52-267)||(37237132-37237344)
chr7 (62-261)||(32518426-32518616)
chr7 (31-272)||(43960939-43961165)
chr7 (61-270)||(44746722-44746931)
chr7 (53-271)||(3538478-3538686)
chr7 (9-188)||(13749081-13749258)
chr7 (68-266)||(44230427-44230625)
chr7 (52-188)||(26005429-26005565)
chr7 (50-188)||(44748465-44748603)
chr7 (31-245)||(12630584-12630799)
chr7 (31-185)||(43114970-43115124)
chr7 (173-267)||(45688866-45688960)
chr7 (138-266)||(37235813-37235941)
chr7 (50-183)||(13599159-13599293)
chr7 (178-266)||(26006773-26006861)
chr7 (176-272)||(19008925-19009021)
chr7 (156-271)||(12630498-12630613)
chr7 (176-266)||(19016725-19016815)
chr7 (198-268)||(44231892-44231962)
chr7 (189-266)||(42611435-42611512)
chr7 (178-265)||(7057359-7057446)
chr7 (178-266)||(27071020-27071108)
chr7 (178-266)||(27207205-27207293)
chr7 (31-91)||(9357679-9357739)
chr7 (52-132)||(45398657-45398737)
chr7 (61-144)||(19218897-19218980)
chr7 (216-265)||(26005412-26005461)
chr7 (52-94)||(44231765-44231807)
chr7 (210-270)||(45398538-45398598)
chr7 (56-111)||(37235939-37235994)
chr7 (52-89)||(45689023-45689060)
chr7 (210-270)||(24653733-24653793)
chr7 (214-270)||(44748569-44748625)
chr7 (218-271)||(13599268-13599321)
chr7 (156-188)||(7057397-7057429)
chr7 (233-265)||(9357862-9357894)
chr7 (218-266)||(13749063-13749111)
chr7 (156-188)||(44231910-44231942)
chr7 (156-188)||(45688885-45688917)
[»] chr1 (34 HSPs)
chr1 (50-273)||(51693140-51693363)
chr1 (49-271)||(52086622-52086842)
chr1 (31-271)||(51468334-51468574)
chr1 (61-275)||(5488780-5488994)
chr1 (31-268)||(17244173-17244410)
chr1 (50-266)||(7110226-7110442)
chr1 (50-275)||(7111377-7111601)
chr1 (50-266)||(51468803-51469019)
chr1 (53-263)||(45229508-45229718)
chr1 (65-260)||(50484913-50485108)
chr1 (31-266)||(52759363-52759598)
chr1 (31-258)||(45228283-45228510)
chr1 (65-265)||(5488502-5488702)
chr1 (68-266)||(40187603-40187800)
chr1 (53-249)||(52087679-52087875)
chr1 (31-250)||(38235033-38235251)
chr1 (68-266)||(18819262-18819460)
chr1 (61-256)||(1821918-1822114)
chr1 (52-264)||(47533758-47533970)
chr1 (67-266)||(1823215-1823410)
chr1 (50-276)||(50483501-50483726)
chr1 (54-185)||(52761502-52761633)
chr1 (72-262)||(47532961-47533150)
chr1 (104-266)||(17245621-17245782)
chr1 (171-271)||(25181496-25181596)
chr1 (31-153)||(21203124-21203246)
chr1 (198-266)||(18820806-18820874)
chr1 (214-266)||(52761602-52761654)
chr1 (99-154)||(49784941-49784996)
chr1 (62-144)||(51088653-51088735)
chr1 (52-129)||(18820679-18820756)
chr1 (217-266)||(21202963-21203012)
chr1 (156-188)||(18820824-18820856)
chr1 (156-188)||(25181519-25181551)
[»] chr4 (41 HSPs)
chr4 (50-267)||(10802888-10803105)
chr4 (50-266)||(7261445-7261661)
chr4 (31-266)||(17356361-17356596)
chr4 (50-268)||(38032322-38032540)
chr4 (31-266)||(22621867-22622099)
chr4 (50-266)||(34095561-34095777)
chr4 (50-271)||(38031163-38031384)
chr4 (50-266)||(8815259-8815475)
chr4 (52-266)||(10804099-10804313)
chr4 (50-265)||(23757872-23758088)
chr4 (60-271)||(8814130-8814340)
chr4 (31-266)||(18091580-18091815)
chr4 (16-267)||(56233723-56233958)
chr4 (31-231)||(22623029-22623226)
chr4 (50-262)||(48501226-48501437)
chr4 (61-266)||(35191817-35192019)
chr4 (56-263)||(48499367-48499573)
chr4 (63-276)||(17357778-17357991)
chr4 (50-266)||(56234923-56235138)
chr4 (31-243)||(5433293-5433502)
chr4 (98-264)||(35193146-35193312)
chr4 (31-246)||(36074677-36074892)
chr4 (173-266)||(34122827-34122920)
chr4 (21-153)||(35925804-35925936)
chr4 (50-154)||(35927018-35927122)
chr4 (156-263)||(48081598-48081705)
chr4 (178-266)||(48463014-48463102)
chr4 (164-266)||(48080270-48080372)
chr4 (170-248)||(48081552-48081630)
chr4 (178-266)||(34121299-34121387)
chr4 (49-129)||(48081281-48081361)
chr4 (50-117)||(48081469-48081536)
chr4 (52-123)||(34122725-34122796)
chr4 (213-264)||(48081392-48081443)
chr4 (52-136)||(48462907-48462991)
chr4 (61-132)||(17522475-17522546)
chr4 (227-266)||(22624389-22624428)
chr4 (52-145)||(21570330-21570423)
chr4 (210-270)||(5574196-5574256)
chr4 (156-188)||(34122870-34122902)
chr4 (156-188)||(48463052-48463084)
[»] chr3 (66 HSPs)
chr3 (50-271)||(28777589-28777810)
chr3 (50-266)||(31937035-31937251)
chr3 (50-271)||(46903526-46903747)
chr3 (20-268)||(2233177-2233425)
chr3 (50-263)||(46902334-46902547)
chr3 (50-266)||(17116202-17116417)
chr3 (56-268)||(31938216-31938427)
chr3 (50-266)||(23073276-23073492)
chr3 (50-264)||(43393955-43394170)
chr3 (52-253)||(21729092-21729293)
chr3 (50-263)||(47431089-47431302)
chr3 (31-265)||(35759114-35759348)
chr3 (50-263)||(55209785-55209997)
chr3 (50-265)||(37609322-37609537)
chr3 (49-266)||(21727910-21728127)
chr3 (50-266)||(28776448-28776664)
chr3 (31-263)||(52521930-52522161)
chr3 (50-266)||(5689725-5689935)
chr3 (53-266)||(10979080-10979293)
chr3 (49-270)||(52525261-52525481)
chr3 (62-265)||(53180718-53180920)
chr3 (67-272)||(17742211-17742417)
chr3 (67-272)||(19043531-19043737)
chr3 (53-266)||(2232602-2232815)
chr3 (65-266)||(54354308-54354509)
chr3 (67-263)||(5691014-5691209)
chr3 (52-272)||(50881020-50881233)
chr3 (68-266)||(54353023-54353221)
chr3 (52-265)||(11346813-11347026)
chr3 (50-266)||(11348374-11348589)
chr3 (50-205)||(17740891-17741046)
chr3 (50-205)||(19042211-19042366)
chr3 (50-265)||(47429628-47429838)
chr3 (58-265)||(53765876-53766083)
chr3 (33-183)||(37610648-37610798)
chr3 (50-244)||(47917515-47917708)
chr3 (98-266)||(46986043-46986208)
chr3 (52-263)||(15290394-15290604)
chr3 (50-188)||(35758082-35758220)
chr3 (135-271)||(23091186-23091322)
chr3 (50-185)||(55210810-55210945)
chr3 (125-263)||(53764432-53764569)
chr3 (49-178)||(10978093-10978221)
chr3 (156-271)||(43392621-43392736)
chr3 (134-269)||(53178698-53178833)
chr3 (134-266)||(17117387-17117517)
chr3 (31-171)||(50879782-50879922)
chr3 (156-270)||(23072056-23072169)
chr3 (178-266)||(34014508-34014596)
chr3 (50-141)||(33111747-33111837)
chr3 (136-264)||(33113306-33113426)
chr3 (166-247)||(50879513-50879594)
chr3 (178-266)||(24376458-24376546)
chr3 (209-276)||(34015829-34015896)
chr3 (178-266)||(27750461-27750549)
chr3 (202-266)||(53101827-53101891)
chr3 (31-106)||(43392766-43392841)
chr3 (173-265)||(27749107-27749199)
chr3 (214-266)||(35758064-35758116)
chr3 (219-263)||(37610797-37610841)
chr3 (56-120)||(53764896-53764959)
chr3 (53-91)||(53101697-53101735)
chr3 (209-253)||(21729382-21729426)
chr3 (31-106)||(23072199-23072274)
chr3 (213-245)||(23072140-23072172)
chr3 (156-188)||(34014526-34014558)
[»] chr6 (26 HSPs)
chr6 (50-266)||(32348939-32349155)
chr6 (31-276)||(32712345-32712587)
chr6 (53-266)||(11801247-11801460)
chr6 (50-266)||(32713785-32714001)
chr6 (31-264)||(34996647-34996877)
chr6 (50-267)||(3000695-3000912)
chr6 (31-267)||(34995351-34995586)
chr6 (50-266)||(18572885-18573100)
chr6 (50-266)||(32347808-32348024)
chr6 (100-266)||(29479146-29479312)
chr6 (50-263)||(19383057-19383262)
chr6 (156-270)||(18574301-18574415)
chr6 (56-154)||(21094517-21094615)
chr6 (60-154)||(27719848-27719941)
chr6 (50-117)||(21095281-21095348)
chr6 (198-268)||(29477757-29477827)
chr6 (467-512)||(32865808-32865853)
chr6 (186-265)||(19788248-19788327)
chr6 (50-106)||(18574215-18574271)
chr6 (186-266)||(19761942-19762022)
chr6 (65-154)||(7628436-7628526)
chr6 (52-94)||(29477912-29477954)
chr6 (192-249)||(25138811-25138868)
chr6 (202-278)||(7628312-7628388)
chr6 (61-145)||(18230452-18230536)
chr6 (156-188)||(29477777-29477809)
[»] chr5 (27 HSPs)
chr5 (50-264)||(19228840-19229054)
chr5 (50-266)||(19229975-19230191)
chr5 (31-275)||(12372304-12372549)
chr5 (50-266)||(39349480-39349696)
chr5 (56-266)||(39350553-39350763)
chr5 (68-271)||(9083216-9083419)
chr5 (50-263)||(13278133-13278346)
chr5 (63-266)||(18654296-18654500)
chr5 (31-269)||(6803508-6803745)
chr5 (51-272)||(13276813-13277026)
chr5 (64-266)||(9081979-9082181)
chr5 (62-266)||(18655566-18655770)
chr5 (31-266)||(12373603-12373839)
chr5 (31-271)||(39164056-39164288)
chr5 (158-266)||(8447077-8447185)
chr5 (50-184)||(4031903-4032039)
chr5 (50-183)||(4032927-4033060)
chr5 (165-263)||(6801977-6802075)
chr5 (176-271)||(35952464-35952559)
chr5 (52-162)||(42962122-42962232)
chr5 (214-271)||(4031876-4031933)
chr5 (178-265)||(25001643-25001730)
chr5 (96-184)||(3944662-3944750)
chr5 (31-130)||(14356562-14356662)
chr5 (61-144)||(30674746-30674829)
chr5 (214-264)||(4033031-4033081)
chr5 (156-188)||(8447095-8447127)
[»] chr2 (19 HSPs)
chr2 (50-267)||(16602724-16602941)
chr2 (50-266)||(38243857-38244073)
chr2 (31-266)||(27892219-27892454)
chr2 (68-267)||(23832967-23833165)
chr2 (50-266)||(27891106-27891322)
chr2 (89-264)||(26388220-26388395)
chr2 (48-206)||(38242943-38243098)
chr2 (156-266)||(16604197-16604307)
chr2 (158-268)||(43814519-43814629)
chr2 (176-266)||(23833898-23833988)
chr2 (178-268)||(5033476-5033566)
chr2 (178-266)||(5034846-5034934)
chr2 (181-265)||(19577359-19577443)
chr2 (52-143)||(370885-370976)
chr2 (178-228)||(15496083-15496133)
chr2 (209-263)||(43814642-43814696)
chr2 (65-154)||(44800984-44801073)
chr2 (52-94)||(5033631-5033673)
chr2 (31-94)||(16604092-16604155)
[»] scaffold0141 (2 HSPs)
scaffold0141 (65-272)||(35202-35409)
scaffold0141 (65-266)||(31033-31234)
[»] scaffold0049 (2 HSPs)
scaffold0049 (65-272)||(79403-79610)
scaffold0049 (65-266)||(83578-83779)
[»] scaffold0878 (3 HSPs)
scaffold0878 (56-266)||(2934-3145)
scaffold0878 (31-188)||(1847-2003)
scaffold0878 (214-248)||(1847-1881)
[»] scaffold1425 (2 HSPs)
scaffold1425 (50-266)||(1503-1719)
scaffold1425 (56-266)||(134-343)
[»] scaffold0018 (1 HSPs)
scaffold0018 (56-267)||(25252-25464)
[»] scaffold0026 (3 HSPs)
scaffold0026 (164-266)||(104301-104403)
scaffold0026 (31-112)||(104405-104486)
scaffold0026 (156-188)||(104319-104351)
[»] scaffold0349 (1 HSPs)
scaffold0349 (60-154)||(9270-9363)
[»] scaffold0035 (1 HSPs)
scaffold0035 (31-144)||(22351-22465)
[»] scaffold0081 (1 HSPs)
scaffold0081 (61-144)||(42923-43003)


Alignment Details
Target: chr8 (Bit Score: 179; Significance: 2e-96; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 31 - 273
Target Start/End: Complemental strand, 9244300 - 9244058
Alignment:
Q  31 atgaagatgaggaaagggaaagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcatttttt 130  Q
    |||||||||||| |||  |||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||||||||    
T  9244300 atgaagatgagggaagaaaaagaagaaaataaataaattaggtgttggtgatacactataaaatctgatagacctccgtaatcctacggtctcatttttt 9244201  T
Q  131 agaggattaaaattatcaaaattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaa 230  Q
    |  ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  9244200 aagggattaaaattatcaaaattgaaccaaattgaataaaataaataagttaagggacgtgtttgagaaagttaaaacttatgggaccaaattgaataaa 9244101  T
Q  231 ataaataagttaagggaccgacagatcaattaagccaaaaata 273  Q
    | |||||||||||||||||  ||||||||||||||| ||||||    
T  9244100 agaaataagttaagggaccagcagatcaattaagcctaaaata 9244058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 31 - 268
Target Start/End: Complemental strand, 26364973 - 26364739
Alignment:
Q  31 atgaagatgaggaaagggaaagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcatttttt 130  Q
    |||||||||||| |||   ||||||||| |||||||||||||||||||||||||| |||||||| | ||||||||| |||||||||||||||| ||||||    
T  26364973 atgaagatgagggaag---aagaagaaactaaataaattaggtgttggtgatacattataaaatctgatagacctctgtaatccaacggtctcttttttt 26364877  T
Q  131 agaggattaaaattatcaaaattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaa 230  Q
    |||||||||||||||||||||||| | ||||| |||||||||||||||||||| ||| ||||||||||||||||| | ||||| ||||||||||||||||    
T  26364876 agaggattaaaattatcaaaattggatcaaattgaataaaagaaataagttaaaggatgtgtttgagaaagttaagacttatgagaccaaattgaataaa 26364777  T
Q  231 ataaataagttaagggaccgacagatcaattaagccaa 268  Q
    | |||||||||||||||||| |||||||||||||||||    
T  26364776 agaaataagttaagggaccggcagatcaattaagccaa 26364739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 31 - 265
Target Start/End: Original strand, 521983 - 522214
Alignment:
Q  31 atgaagatgaggaaagggaaagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcatttttt 130  Q
    |||||||||||| |||   ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||| |||| |    
T  521983 atgaagatgagggaag---aagaagaaagtaaataaattaggggttggtgatacactataaaatttgatagacctccgtaatccaacagtctctttttct 522079  T
Q  131 agaggattaaaattatcaaaattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaa 230  Q
    || ||||||||||||||||||||  | ||||| |||||||| |||||||||||||||| |||||||||||||||| | |||||| |||||||||||||||    
T  522080 aggggattaaaattatcaaaattagatcaaattgaataaaataaataagttaagggacatgtttgagaaagttaagacttatggaaccaaattgaataaa 522179  T
Q  231 ataaataagttaagggaccgacagatcaattaagc 265  Q
    | |||||||||||||||||||||||| ||||||||    
T  522180 agaaataagttaagggaccgacagattaattaagc 522214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 31 - 263
Target Start/End: Original strand, 30644591 - 30644819
Alignment:
Q  31 atgaagatgaggaaagggaaagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcatttttt 130  Q
    |||||||||||| |||   ||||| ||| ||||||||||||||||||||||| || |||||||||| |||||||||||||||||||||||||| ||||||    
T  30644591 atgaagatgagggaag---aagaaaaaactaaataaattaggtgttggtgatccattataaaatttgatagacctccgtaatccaacggtctc-tttttt 30644686  T
Q  131 agaggattaaaattatcaaaattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaa 230  Q
    |||||||||||||||||||||||| | ||||| ||||||||||||||||||||| |||||||||||||||||||| | ||||||||||||||| ||||||    
T  30644687 agaggattaaaattatcaaaattggatcaaattgaataaaagaaataagttaagagacgtgtttgagaaagttaagatttatgggaccaaattaaataaa 30644786  T
Q  231 ataaataagttaagggaccgacagatcaattaa 263  Q
    | |||||| |||||| |||||||||||||||||    
T  30644787 agaaataaattaaggaaccgacagatcaattaa 30644819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 50 - 263
Target Start/End: Complemental strand, 30641013 - 30640801
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaa 149  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||| ||    
T  30641013 aagaagaaagtaaataaattaggtgttggtgatacactataaaatttgatagacctccgtaatccaacggtctctttttttaggggattaaaattattaa 30640914  T
Q  150 aattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggacc 249  Q
    ||||| | ||||| ||||||||||||||||||||  ||||||||||| || ||||||| ||||||||||||||||||||||| ||||||||||| |||||    
T  30640913 aattggatcaaattgaataaaagaaataagttaa-tgacgtgtttgataaggttaaaacttatgggaccaaattgaataaaagaaataagttaaaggacc 30640815  T
Q  250 gacagatcaattaa 263  Q
    | || |||||||||    
T  30640814 ggcatatcaattaa 30640801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 50 - 266
Target Start/End: Complemental strand, 20309139 - 20308923
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaa 149  Q
    |||||||||||||||||||||||| |||||||||||||||||||| | ||||||||| || ||||||||||||| |||| ||| |||| |||||||||||    
T  20309139 aagaagaaagtaaataaattaggtattggtgatacactataaaatctgatagacctcagtgatccaacggtctctttttctaggggatcaaaattatcaa 20309040  T
Q  150 aattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggacc 249  Q
    ||||| ||||||| ||||||||  ||||| |||||||||||||||||||||||||||| |||||||||  |||||||||||| |||||||||||||||||    
T  20309039 aattggaccaaattgaataaaaacaataaattaagggacgtgtttgagaaagttaaaacttatgggactcaattgaataaaagaaataagttaagggacc 20308940  T
Q  250 gacagatcaattaagcc 266  Q
    | |||||||||||||||    
T  20308939 ggcagatcaattaagcc 20308923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 50 - 266
Target Start/End: Complemental strand, 21095772 - 21095556
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaa 149  Q
    |||||||||||||||||||||||| |||||||||||||||||||| | ||||||||| || ||||||||||||| |||| ||| |||| |||||||||||    
T  21095772 aagaagaaagtaaataaattaggtattggtgatacactataaaatctgatagacctcagtgatccaacggtctctttttctaggggatcaaaattatcaa 21095673  T
Q  150 aattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggacc 249  Q
    ||||| ||||||| ||||||||  ||||| |||||||||||||||||||||||||||| |||||||||  |||||||||||| |||||||||||||||||    
T  21095672 aattggaccaaattgaataaaaacaataaattaagggacgtgtttgagaaagttaaaacttatgggactcaattgaataaaagaaataagttaagggacc 21095573  T
Q  250 gacagatcaattaagcc 266  Q
    | |||||||||||||||    
T  21095572 ggcagatcaattaagcc 21095556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 50 - 266
Target Start/End: Original strand, 9245333 - 9245550
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaa 149  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| | |||||||||||||| |||||||| ||||||||||||| ||    
T  9245333 aagaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagacctcagcaatccaacggtctctttttttaggggattaaaattataaa 9245432  T
Q  150 aattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagtt-aagggac 248  Q
    ||||| || |||| |||||||| |||||| |||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||| || ||||    
T  9245433 aattggactaaattgaataaaataaataaattaagggacgtgtttgagaaagttaagacttatgggaccaaattgaataaaagaaataagttaaaaggac 9245532  T
Q  249 cgacagatcaattaagcc 266  Q
    || ||||||| |||||||    
T  9245533 cggcagatcatttaagcc 9245550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 50 - 266
Target Start/End: Complemental strand, 41637047 - 41636831
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaa 149  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| | |||||| ||||||||||||||||||| |||||||| ||||||||||||| ||    
T  41637047 aagaagaaagtaaataaattaggtgttggtgatacacgataaaatctgatagacttccgtaatccaacggtctctttttttaggggattaaaattataaa 41636948  T
Q  150 aattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggacc 249  Q
    | ||| ||||||| ||||||||||||||| ||||||||||||||| |||||||||| | ||||||||||||||||||| ||| |||||||| || |||||    
T  41636947 agttggaccaaattgaataaaagaaataaattaagggacgtgttttagaaagttaagacttatgggaccaaattgaatgaaagaaataagtaaaaggacc 41636848  T
Q  250 gacagatcaattaagcc 266  Q
    | || ||||||||||||    
T  41636847 ggcaaatcaattaagcc 41636831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 56 - 264
Target Start/End: Complemental strand, 34642874 - 34642667
Alignment:
Q  56 aaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaaaattga 155  Q
    |||||||||||||||| ||||||||||| |||||||||| | ||||||||||| ||||||||||| |  |||||||| |||||||||||||||||||| |    
T  34642874 aaagtaaataaattagatgttggtgatatactataaaatctgatagacctccgcaatccaacggtttt-ttttttaggggattaaaattatcaaaattaa 34642776  T
Q  156 accaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacaga 255  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| | ||||  ||||||||||||||||| |||||||||||| ||||| ||||    
T  34642775 accaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatatgaccaaattgaataaaagaaataagttaagagaccggcaga 34642676  T
Q  256 tcaattaag 264  Q
    |||||||||    
T  34642675 tcaattaag 34642667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 50 - 266
Target Start/End: Complemental strand, 43584624 - 43584408
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaa 149  Q
    ||||||||||||||||||||||   ||||||||||| |||||||| | |||||| |  |||||||||||||||| ||||||| | |||||||||||||||    
T  43584624 aagaagaaagtaaataaattagacattggtgatacattataaaatctgatagacttttgtaatccaacggtctctttttttaaaagattaaaattatcaa 43584525  T
Q  150 aattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggacc 249  Q
    ||||| | ||||| |||||||||||||||||||||||||||||||||||||||||| | ||||| || |||||||||||||| ||||||||||| |||||    
T  43584524 aattggatcaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgagatcaaattgaataaaagaaataagttaatggacc 43584425  T
Q  250 gacagatcaattaagcc 266  Q
    |||||||||||||||||    
T  43584424 gacagatcaattaagcc 43584408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 53 - 268
Target Start/End: Original strand, 20309956 - 20310172
Alignment:
Q  53 aagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttt-tagaggattaaaattatcaaaa 151  Q
    |||||||||||||| |||||||| |||||||||||||||||| | | |||||| | ||||||||||||||  ||||| ||  ||||||||||||||||||    
T  20309956 aagaaagtaaataagttaggtgtaggtgatacactataaaatctgacagaccttcataatccaacggtcttttttttctaagggattaaaattatcaaaa 20310055  T
Q  152 ttgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccga 251  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| |||| | ||||| ||||||| ||||||||| ||||||||||||||||       
T  20310056 ttgaaccaaatcgaataaaagaaataagttaagggacgtgtttgagaaacttaagacttatgagaccaaaatgaataaaagaaataagttaagggacgag 20310155  T
Q  252 cagatcaattaagccaa 268  Q
    ||||| |||||||||||    
T  20310156 cagattaattaagccaa 20310172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 53 - 268
Target Start/End: Original strand, 21096589 - 21096805
Alignment:
Q  53 aagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttt-tagaggattaaaattatcaaaa 151  Q
    |||||||||||||| |||||||| |||||||||||||||||| | | |||||| | ||||||||||||||  ||||| ||  ||||||||||||||||||    
T  21096589 aagaaagtaaataagttaggtgtaggtgatacactataaaatctgacagaccttcataatccaacggtcttttttttctaagggattaaaattatcaaaa 21096688  T
Q  152 ttgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccga 251  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| |||| | ||||| ||||||| ||||||||| ||||||||||||||||       
T  21096689 ttgaaccaaatcgaataaaagaaataagttaagggacgtgtttgagaaacttaagacttatgagaccaaaatgaataaaagaaataagttaagggacgag 21096788  T
Q  252 cagatcaattaagccaa 268  Q
    ||||| |||||||||||    
T  21096789 cagattaattaagccaa 21096805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 65 - 267
Target Start/End: Original strand, 41638070 - 41638271
Alignment:
Q  65 aaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaaaattgaaccaaatgg 164  Q
    |||||||||||||||||||||||||||||  | ||||||||| |||||||||  ||||| |||||||| ||||||||||||| ||||||| ||||||| |    
T  41638070 aaattaggtgttggtgatacactataaaacatgatagacctctgtaatccaattgtctc-ttttttaggggattaaaattattaaaattggaccaaattg 41638168  T
Q  165 aataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatcaattaag 264  Q
    ||||||||||||||||||| |||| |||||||||||||||| | ||||| ||  ||||||||||||| |||||||||||||||||| |||||||||||||    
T  41638169 aataaaagaaataagttaaaggacatgtttgagaaagttaagacttatgagaataaattgaataaaagaaataagttaagggaccggcagatcaattaag 41638268  T
Q  265 cca 267  Q
    |||    
T  41638269 cca 41638271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 50 - 267
Target Start/End: Original strand, 26366096 - 26366313
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaa 149  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||| ||||||||  |||||||| ||||||||||||| ||    
T  26366096 aagaagaaagtaaataaattatgtgttggtgatacactataaaatctaatagacctccgtaatctaacggtctttttttttaggggattaaaattattaa 26366195  T
Q  150 aattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggacc 249  Q
    || || ||||||| ||||||||||||||||||| || || ||||||| || ||||| | |||||  |||||||| ||||||| ||||||||||| ||| |    
T  26366196 aaatggaccaaattgaataaaagaaataagttatggaacatgtttgataaggttaagacttatgaaaccaaattaaataaaagaaataagttaaaggatc 26366295  T
Q  250 gacagatcaattaagcca 267  Q
    | ||||||||||||||||    
T  26366296 ggcagatcaattaagcca 26366313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 31 - 276
Target Start/End: Original strand, 34643848 - 34644087
Alignment:
Q  31 atgaagatgaggaaagggaaagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcatttttt 130  Q
    |||||||||||| |||   ||||||||   |||||||||||||||||||||||| | ||||||| | |||||||||   |||||||||||||  ||||||    
T  34643848 atgaagatgagggaagaagaagaagaatccaaataaattaggtgttggtgatacgccataaaatctgatagacctc---aatccaacggtct--tttttt 34643942  T
Q  131 agaggattaaaattatcaaaattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaa 230  Q
    || |||||||||||||||||||||||| ||||  |||||||||||||| ||||  || ||||||||||||||||| | |||||||| |||||||||||||    
T  34643943 aggggattaaaattatcaaaattgaactaaattaaataaaagaaataaattaatagaggtgtttgagaaagttaagatttatggga-caaattgaataaa 34644041  T
Q  231 ataaataagttaagggaccgacagatcaattaagccaaaaataaat 276  Q
    | |||||||| ||||||||||| |||||||||||| |||| |||||    
T  34644042 agaaataagtcaagggaccgacggatcaattaagctaaaattaaat 34644087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 52 - 263
Target Start/End: Original strand, 43585849 - 43586059
Alignment:
Q  52 gaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaaaa 151  Q
    ||||||| |||||||||||||| ||| |||||||||||||||| |  ||||||| | |||||||| |||||  ||||||| |||||||||||||| ||||    
T  43585849 gaagaaaataaataaattaggtattgatgatacactataaaatatggtagaccttcataatccaatggtctt-ttttttaaaggattaaaattattaaaa 43585947  T
Q  152 ttgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccga 251  Q
    ||| | ||||| ||||||| ||||||| ||||  ||| ||||||||||| |||| | ||||| || |||||| ||||||| |||||||||||||||||||    
T  43585948 ttggatcaaattgaataaatgaaataatttaatagacatgtttgagaaaattaagacttatgagatcaaattaaataaaagaaataagttaagggaccga 43586047  T
Q  252 cagatcaattaa 263  Q
    ||||||||||||    
T  43586048 cagatcaattaa 43586059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 164 - 268
Target Start/End: Complemental strand, 31203068 - 31202964
Alignment:
Q  164 gaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatcaattaa 263  Q
    ||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||| ||||||||| ||||||||||||| | |||||||| ||||||    
T  31203068 gaataaaagaaataagttaagggacgtgtttgagaaacttaagatttatgggaccaaaatgaataaaagaaataagttaaggaaacgacagattaattaa 31202969  T
Q  264 gccaa 268  Q
    |||||    
T  31202968 gccaa 31202964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 3714550 - 3714638
Alignment:
Q  178 agttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatcaattaagcc 266  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||    
T  3714550 agttaagggatgtgtttgagaaagttaaaacttatgggaccaaattgaataaaagaaataagttaaggaaccggcagatcaattaagcc 3714638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 43134079 - 43134167
Alignment:
Q  178 agttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatcaattaagcc 266  Q
    |||||||||| |||||| |||||||||||| |||| |||||||||||||||||| ||||||||||| ||||||||| ||||||||||||    
T  43134079 agttaagggatgtgtttaagaaagttaaaagttataggaccaaattgaataaaagaaataagttaaaggaccgacatatcaattaagcc 43134167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 3713149 - 3713061
Alignment:
Q  178 agttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatcaattaagccaa 268  Q
    |||||||||| ||||||||||||||||||| |||| | |||||||| ||||||| |||||| ||||| |||||||||||||||||||||||    
T  3713149 agttaagggatgtgtttgagaaagttaaaacttat-gaaccaaattaaataaaagaaataa-ttaagagaccgacagatcaattaagccaa 3713061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 50 - 129
Target Start/End: Complemental strand, 22012353 - 22012274
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttt 129  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |  ||||||||  | |||||||| |||| |||||    
T  22012353 aagaagaaagtaaataaatcaggtgttggtgatacactataaaatctggtagacctcacttatccaacgatctccttttt 22012274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 31203126 - 31203071
Alignment:
Q  55 gaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgta 110  Q
    |||||||||||| |||||||||||||||||| |||||||||| |||||||||||||    
T  31203126 gaaagtaaataagttaggtgttggtgatacattataaaatttgatagacctccgta 31203071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 50 - 129
Target Start/End: Original strand, 22013161 - 22013240
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttt 129  Q
    |||| |||||||||||||| ||||||||||||||||||||||||| |  ||||||||  | |||||||| |||| |||||    
T  22013161 aagatgaaagtaaataaatcaggtgttggtgatacactataaaatctggtagacctcacttatccaacgatctccttttt 22013240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 198 - 266
Target Start/End: Complemental strand, 22012225 - 22012157
Alignment:
Q  198 aaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatcaattaagcc 266  Q
    |||||||| | ||||| ||||||| ||||  ||| |||||||||||||||||||||| |||||||||||    
T  22012225 aaagttaagagttatgagaccaaactgaaataaagaaataagttaagggaccgacagttcaattaagcc 22012157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 52 - 123
Target Start/End: Original strand, 3714443 - 3714514
Alignment:
Q  52 gaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctc 123  Q
    ||||||||||||||||| | |||||||||||||||||||| || | ||||| |||| | |||||||| ||||    
T  3714443 gaagaaagtaaataaatcaagtgttggtgatacactataagatctgatagatctcccttatccaacgatctc 3714514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 198 - 266
Target Start/End: Original strand, 22013289 - 22013357
Alignment:
Q  198 aaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatcaattaagcc 266  Q
    |||||||| | ||||||||||||| ||||  ||| |||||||||||||||||  ||| |||||||||||    
T  22013289 aaagttaagagttatgggaccaaactgaaataaagaaataagttaagggaccagcagttcaattaagcc 22013357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 123
Target Start/End: Complemental strand, 3713256 - 3713185
Alignment:
Q  52 gaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctc 123  Q
    ||||||||||||||||| | ||||| |||||||||||||| || | ||||| |||| | |||||||| ||||    
T  3713256 gaagaaagtaaataaatcaagtgtttgtgatacactataagatctaatagatctcccttatccaacgatctc 3713185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 56 - 94
Target Start/End: Original strand, 43133976 - 43134014
Alignment:
Q  56 aaagtaaataaattaggtgttggtgatacactataaaat 94  Q
    ||||||||||||| | |||||||||||||||||||||||    
T  43133976 aaagtaaataaatcaagtgttggtgatacactataaaat 43134014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 131
Target Start/End: Complemental strand, 20066277 - 20066208
Alignment:
Q  62 aataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcatttttta 131  Q
    |||||||||||||||||||||||||| | |||| | || || |||  | ||||||||||||| |||||||    
T  20066277 aataaattaggtgttggtgatacactgttaaatctgatggatctcttttatccaacggtctcttttttta 20066208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 176; Significance: 1e-94; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 31 - 266
Target Start/End: Complemental strand, 29186899 - 29186664
Alignment:
Q  31 atgaagatgaggaaagggaaagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcatttttt 130  Q
    |||||||||||| |||  |||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||||||||    
T  29186899 atgaagatgagggaagaaaaagaagaaaataaataaattaggtgttggtgatacactataaaatctgatagacctccgtaatcctacggtctcatttttt 29186800  T
Q  131 agaggattaaaattatcaaaattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaa 230  Q
    |  ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  29186799 aagggattaaaattatcaaaattgaaccaaattgaataaaataaataagttaagggacgtgtttgagaaagttaaaacttatgggaccaaattgaataaa 29186700  T
Q  231 ataaataagttaagggaccgacagatcaattaagcc 266  Q
    | |||||||||||||||||  |||||||||||||||    
T  29186699 agaaataagttaagggaccagcagatcaattaagcc 29186664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 50 - 266
Target Start/End: Complemental strand, 43113890 - 43113674
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaa 149  Q
    |||||||||| |||||||||||||| ||||||||||||||||||| | ||||||||| |||||||||||||||| |||||||| ||||||||||||||||    
T  43113890 aagaagaaagcaaataaattaggtgctggtgatacactataaaatctgatagacctctgtaatccaacggtctctttttttaggggattaaaattatcaa 43113791  T
Q  150 aattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggacc 249  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||    
T  43113790 aattggaccaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaaaacttatgagaccaaattgaataaaagaaataagttaagggacc 43113691  T
Q  250 gacagatcaattaagcc 266  Q
    |||||||||||||||||    
T  43113690 gacagatcaattaagcc 43113674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 50 - 271
Target Start/End: Complemental strand, 19217843 - 19217622
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaa 149  Q
    |||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||| |||||||| | ||||||||||||||    
T  19217843 aagaagaaagtaaataaattaggtgttggtgatacactataaaatccgatagacctccgtaatccaacggtctctttttttagggtattaaaattatcaa 19217744  T
Q  150 aattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggacc 249  Q
    ||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||||    
T  19217743 aattgtaccaaattgaataaaagaaataagttaatggacgtgtttgagaaagttaagacttatgggaccaaattgaataaaagaaataagttaagggacc 19217644  T
Q  250 gacagatcaattaagccaaaaa 271  Q
    | ||||||||||||||| ||||    
T  19217643 ggcagatcaattaagcctaaaa 19217622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 20 - 276
Target Start/End: Complemental strand, 9391765 - 9391509
Alignment:
Q  20 ttgaaggttgcatgaagatgaggaaagggaaagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacgg 119  Q
    ||||||| || |||||||||| | |||   |||||||||||||||||||| ||||||| |||||||||||||||| | |||||||| |||||||||||||    
T  9391765 ttgaaggatgaatgaagatgatggaagaagaagaagaaagtaaataaatttggtgttgatgatacactataaaatctgatagaccttcgtaatccaacgg 9391666  T
Q  120 tctcattttttagaggattaaaattatcaaaattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggacca 219  Q
    |||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||| |||| | |||| ||||||    
T  9391665 tctctttttttaaaggattaaaattatcaaaattgtaccaaattgaataaaagaaataagtgaagggacgtgtttgagaaaattaagatttataggacca 9391566  T
Q  220 aattgaataaaataaataagttaagggaccgacagatcaattaagccaaaaataaat 276  Q
    |||||||||||| |||||||||||||||||| |||||||||||||||||| ||||||    
T  9391565 aattgaataaaagaaataagttaagggaccggcagatcaattaagccaaagataaat 9391509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 31 - 266
Target Start/End: Original strand, 18788443 - 18788678
Alignment:
Q  31 atgaagatgaggaaagggaaagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcatttttt 130  Q
    |||||||||||| || |  |||||||||||||||||||||||||||||||||||| |||||||| | |||||||| ||||||||||||||||  ||||||    
T  18788443 atgaagatgagggaaagagaagaagaaagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaatccaacggtctattttttt 18788542  T
Q  131 agaggattaaaattatcaaaattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaa 230  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||| | |||| |||||| ||||||||||    
T  18788543 agaggattaaaattatcaaaattggaccaaattgaataaaagaaataagttaagggacatgtttgagaaagttaagatttataggaccatattgaataaa 18788642  T
Q  231 ataaataagttaagggaccgacagatcaattaagcc 266  Q
    | |||||| ||||||||||| || ||||||||||||    
T  18788643 agaaataaattaagggaccggcatatcaattaagcc 18788678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 50 - 273
Target Start/End: Complemental strand, 44417673 - 44417450
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaa 149  Q
    |||||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||  |||| |||||||| ||||||||||||||||    
T  44417673 aagaagaaagtaaataaattaggtgttggtgatagactataaaatctgatagacctccgtaatccaacaatctctttttttaggggattaaaattatcaa 44417574  T
Q  150 aattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggacc 249  Q
    ||||| ||||||| ||| |||| ||||||||||||||||||||||||||| ||||| | |||||| |||||||||||||||| |||||||||||||||||    
T  44417573 aattggaccaaattgaagaaaataaataagttaagggacgtgtttgagaatgttaagacttatggaaccaaattgaataaaagaaataagttaagggacc 44417474  T
Q  250 gacagatcaattaagccaaaaata 273  Q
    | ||||||||||||||| ||||||    
T  44417473 ggcagatcaattaagcctaaaata 44417450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 49 - 263
Target Start/End: Complemental strand, 3537642 - 3537429
Alignment:
Q  49 aaagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatca 148  Q
    ||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||| |||||||||||||| || |||||||| ||||||||||||| |    
T  3537642 aaagaagaaagtaaa-aaattaggtgatggtgatatactataaaattttatagaccttcgtaatccaacggtttctttttttaggggattaaaattatta 3537544  T
Q  149 aaattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggac 248  Q
    |||||  || |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  3537543 aaattagactaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaaaacttatgggaccaaattgaataaaagaaataagttaagggac 3537444  T
Q  249 cgacagatcaattaa 263  Q
    || ||||||||||||    
T  3537443 cggcagatcaattaa 3537429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 56 - 268
Target Start/End: Original strand, 27072562 - 27072774
Alignment:
Q  56 aaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaaaattga 155  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||| |  |||||||| ||||||||||||||||||||      
T  27072562 aaagtaaataaattaggtgttggtgataaactataaaatcttatagacctctgtaatccaacggtttttttttttagtggattaaaattatcaaaatttg 27072661  T
Q  156 accaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacaga 255  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||||||| | |||||||| |||||||||||||| |||||| ||||||||||||||||    
T  27072662 accaaattgaataaaagaaataagttaagggacatgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacaga 27072761  T
Q  256 tcaattaagccaa 268  Q
    |||||||||||||    
T  27072762 tcaattaagccaa 27072774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 56 - 268
Target Start/End: Complemental strand, 27205751 - 27205539
Alignment:
Q  56 aaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaaaattga 155  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||| |  |||||||| ||||||||||||||||||||      
T  27205751 aaagtaaataaattaggtgttggtgatagactataaaatcttatagacctctgtaatccaacggtttttttttttagtggattaaaattatcaaaatttg 27205652  T
Q  156 accaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacaga 255  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||||||| | |||||||| |||||||||||||| |||||| ||||||||||||||||    
T  27205651 accaaattgaataaaagaaataagttaagggacatgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataaattaagggaccgacaga 27205552  T
Q  256 tcaattaagccaa 268  Q
    |||||||||||||    
T  27205551 tcaattaagccaa 27205539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 48 - 272
Target Start/End: Complemental strand, 48792661 - 48792437
Alignment:
Q  48 gaaagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatc 147  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| ||||| |||   |||||||||||||||| ||||||||  |||||||||||||    
T  48792661 gaaagaagaaagtaaataaatttggtgttggtgatacactataaaatcttatacacccttgtaatccaacggtctctttttttaggagattaaaattatc 48792562  T
Q  148 aaaattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaaggga 247  Q
    ||||||  | ||||| ||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  48792561 aaaattagatcaaattgaataaaagaaataagttaagggacatgtttgaaaaagttaaaacttatgggaccaaattgaataaaagaaataagttaaggga 48792462  T
Q  248 ccgacagatcaattaagccaaaaat 272  Q
    ||| ||||||||||||||| |||||    
T  48792461 ccggcagatcaattaagcctaaaat 48792437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 50 - 266
Target Start/End: Original strand, 29187932 - 29188148
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaa 149  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||| | |||||||||||||| |||||||| ||||||||||||||||    
T  29187932 aagaagaaagtaaataaattaggtgttggtgatgcactataaaatctgatagacctctgcaatccaacggtctctttttttaggggattaaaattatcaa 29188031  T
Q  150 aattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggacc 249  Q
    ||||| || |||| |||||||| |||||| |||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||| |||||    
T  29188032 aattggactaaattgaataaaataaataaattaagggacgtgtttgagaaagttaagacttatgggaccaaattgaataaaagaaataagttaaaggacc 29188131  T
Q  250 gacagatcaattaagcc 266  Q
    | ||||||| |||||||    
T  29188132 ggcagatcatttaagcc 29188148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 50 - 266
Target Start/End: Original strand, 48793418 - 48793634
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaa 149  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||  |||||||||||||||| ||||||||  |||||||||||||||    
T  48793418 aagaagaaagtaaataaatttggtgttggtgatacactataaaatcttatacacctttgtaatccaacggtctctttttttaggagattaaaattatcaa 48793517  T
Q  150 aattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggacc 249  Q
    ||||| | ||||| ||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||| ||||||||| |||||||||||||||||    
T  48793518 aattggatcaaattgaataaaagaaataagttaagggacgtgtttgaaaaagttaagacttatgggaccaaaatgaataaaagaaataagttaagggacc 48793617  T
Q  250 gacagatcaattaagcc 266  Q
    | || ||||||||||||    
T  48793618 ggcaaatcaattaagcc 48793634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 50 - 267
Target Start/End: Original strand, 13750538 - 13750755
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaa 149  Q
    |||| ||||||| ||||||||| || || |||||||||||||||| | |||||||| ||||||||||||||||  |||||||| ||||||||||||||||    
T  13750538 aagacgaaagtatataaattagttgatgatgatacactataaaatctaatagaccttcgtaatccaacggtctgtttttttaggggattaaaattatcaa 13750637  T
Q  150 aattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggacc 249  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| | ||||| || |||||||||||||| |||||||||||||||||    
T  13750638 aattggaccaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgtgatcaaattgaataaaagaaataagttaagggacc 13750737  T
Q  250 gacagatcaattaagcca 267  Q
    | ||||||||||||||||    
T  13750738 ggcagatcaattaagcca 13750755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 50 - 271
Target Start/End: Complemental strand, 18787364 - 18787143
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaa 149  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||| | ||| |||||||||||||||||||||  |||||||| ||||||||||||||||    
T  18787364 aagaagaaagtaaataaattaagtgttggtgatacaccataaaatctgataaacctccgtaatccaacggtctatttttttaggggattaaaattatcaa 18787265  T
Q  150 aattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggacc 249  Q
    ||||| ||||||| ||||||||||||||||||||||||| | ||||| |||||||| | ||||||||||||||| || |||| |||||| ||||||||||    
T  18787264 aattggaccaaattgaataaaagaaataagttaagggacatatttgaaaaagttaagatttatgggaccaaattaaacaaaagaaataaattaagggacc 18787165  T
Q  250 gacagatcaattaagccaaaaa 271  Q
    |||||||||||||||| |||||    
T  18787164 gacagatcaattaagctaaaaa 18787143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 21 - 266
Target Start/End: Original strand, 43962442 - 43962687
Alignment:
Q  21 tgaaggttgcatgaagatgaggaaagggaaagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggt 120  Q
    |||||| || ||| |||||||| |||   |||||||||| |||||||||||||||| |||||| |||||||||| | |||||||| ||||||||||||||    
T  43962442 tgaaggatgaatgtagatgagggaagaagaagaagaaaggaaataaattaggtgttagtgatatactataaaatctgatagaccttcgtaatccaacggt 43962541  T
Q  121 ctcattttttagaggattaaaattatcaaaattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaa 220  Q
    ||  ||||||||| |||||||||||||||||||| | ||||| ||||||||||||||||||||||||| |||||||||||| ||| | ||||| ||||||    
T  43962542 ctgtttttttagatgattaaaattatcaaaattggatcaaattgaataaaagaaataagttaagggacatgtttgagaaagctaagacttatgtgaccaa 43962641  T
Q  221 attgaataaaataaataagttaagggaccgacagatcaattaagcc 266  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||    
T  43962642 attgaataaaagaaataagttaagggaccggcagatcaattaagcc 43962687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 56 - 266
Target Start/End: Complemental strand, 7011844 - 7011633
Alignment:
Q  56 aaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttaga-ggattaaaattatcaaaattg 154  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||||  | |||||||||||||||||||||    
T  7011844 aaagtaaataaattaggtgttggtgatacactataaaatcttatagacctccgtaatccaacggtcttttttttttaatggattaaaattatcaaaattg 7011745  T
Q  155 aaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacag 254  Q
     ||||||| |||||||||||||||| |||||||| ||||||| |||||||| | ||||| || |||||||||||||| |||||||||||||||| |||||    
T  7011744 gaccaaattgaataaaagaaataagctaagggacatgtttgataaagttaagacttatgagatcaaattgaataaaagaaataagttaagggactgacag 7011645  T
Q  255 atcaattaagcc 266  Q
    ||||||||||||    
T  7011644 atcaattaagcc 7011633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 56 - 266
Target Start/End: Complemental strand, 7027202 - 7026991
Alignment:
Q  56 aaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttaga-ggattaaaattatcaaaattg 154  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||||  | |||||||||||||||||||||    
T  7027202 aaagtaaataaattaggtgttggtgatacactataaaatcttatagacctccgtaatccaacggtcttttttttttaatggattaaaattatcaaaattg 7027103  T
Q  155 aaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacag 254  Q
     ||||||| |||||||||||||||| |||||||| ||||||| |||||||| | ||||| || |||||||||||||| |||||||||||||||| |||||    
T  7027102 gaccaaattgaataaaagaaataagctaagggacatgtttgataaagttaagacttatgagatcaaattgaataaaagaaataagttaagggactgacag 7027003  T
Q  255 atcaattaagcc 266  Q
    ||||||||||||    
T  7027002 atcaattaagcc 7026991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 50 - 266
Target Start/End: Complemental strand, 13597359 - 13597144
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaa 149  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| | || |||||||||||||||||||||||||    
T  13597359 aagaagaaagtaaataaattaggtgttggtgatacactataaaatcttatagacctccctaatccaacgatatctttttttagaggattaaaattatcaa 13597260  T
Q  150 aattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggacc 249  Q
    ||||| | |||||  ||||||||||||||||| ||||||||||||||||||||||| | |||| |||||||||||||||||| ||||| ||||| ||| |    
T  13597259 aattg-atcaaatttaataaaagaaataagttcagggacgtgtttgagaaagttaagacttataggaccaaattgaataaaagaaatacgttaaaggatc 13597161  T
Q  250 gacagatcaattaagcc 266  Q
    | ||| |||||||||||    
T  13597160 ggcagttcaattaagcc 13597144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 50 - 266
Target Start/End: Original strand, 44420425 - 44420640
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaa 149  Q
    |||||||||||||||||||||| |||||||||||||||||||| | | |||||||| |||||||||||||| || |||||||| | ||||||||||||||    
T  44420425 aagaagaaagtaaataaattagatgttggtgatacactataaa-tctgatagaccttcgtaatccaacggtatctttttttagggcattaaaattatcaa 44420523  T
Q  150 aattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggacc 249  Q
    ||||| || |||| |||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||||| ||||||||||| ||| |    
T  44420524 aattggactaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaaaggatc 44420623  T
Q  250 gacagatcaattaagcc 266  Q
    | || ||||||||||||    
T  44420624 ggcatatcaattaagcc 44420640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 50 - 269
Target Start/End: Original strand, 45399912 - 45400131
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaa 149  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| | |||||||| ||||||||||||||||| |||||||| ||||||||||||||||    
T  45399912 aagaagaaagtaaataaattaggtgttagtgatacactataaaatctgatagaccttcgtaatccaacggtctctttttttaggggattaaaattatcaa 45400011  T
Q  150 aattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggacc 249  Q
    ||||| ||||||   |||||||||||||||||||||||||||||||  |||||||| | ||||| ||||||||  ||  ||| |||||||||||||||||    
T  45400012 aattggaccaaagtaaataaaagaaataagttaagggacgtgtttgcaaaagttaagagttatgagaccaaatcaaaataaacaaataagttaagggacc 45400111  T
Q  250 gacagatcaattaagccaaa 269  Q
    | |||||||||||| |||||    
T  45400112 ggcagatcaattaaaccaaa 45400131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 50 - 266
Target Start/End: Original strand, 9392717 - 9392933
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaa 149  Q
    |||||||||||||||||||||||||  |||||||||||||||||| | ||||||||| |||||||||||||||| |||| ||| ||||||||||||||||    
T  9392717 aagaagaaagtaaataaattaggtgccggtgatacactataaaatctgatagacctctgtaatccaacggtctctttttctaggggattaaaattatcaa 9392816  T
Q  150 aattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggacc 249  Q
    ||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||| | |||| |||  ||||| ||||||| ||||||||||| ||| |    
T  9392817 aattggaccaaattgaataaaagaaataagttaagggacatgtttgagaaagttaagacttataggaataaattaaataaaagaaataagttaaaggaac 9392916  T
Q  250 gacagatcaattaagcc 266  Q
    |  ||||||||||||||    
T  9392917 ggaagatcaattaagcc 9392933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 57 - 266
Target Start/End: Original strand, 32519658 - 32519867
Alignment:
Q  57 aagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaaaattgaa 156  Q
    ||||||| ||||||||||||||||| |||||||| ||| |  ||||||| |||||| |||||||||| |||||||  ||||||||||||| |||||||||    
T  32519658 aagtaaaaaaattaggtgttggtgacacactatacaatctggtagaccttcgtaattcaacggtctctttttttaagggattaaaattattaaaattgaa 32519757  T
Q  157 ccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagat 256  Q
    |||||| ||||||||||||||| |||||||| ||||||||||||||||| | ||||||||||||||||||||||| |||||| ||||||||||| |||||    
T  32519758 ccaaattgaataaaagaaataatttaagggatgtgtttgagaaagttaagatttatgggaccaaattgaataaaagaaataaattaagggaccggcagat 32519857  T
Q  257 caattaagcc 266  Q
    ||||| ||||    
T  32519858 caatttagcc 32519867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 52 - 267
Target Start/End: Original strand, 37237132 - 37237344
Alignment:
Q  52 gaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaaaa 151  Q
    |||||||||||||||||||||||||||| |||||||||||||| | ||||||||||||||||||||| |||| |||||||||||||| ||||||||||||    
T  37237132 gaagaaagtaaataaattaggtgttggtcatacactataaaatctgatagacctccgtaatccaacgatctctttttttagaggatt-aaattatcaaaa 37237230  T
Q  152 ttgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccga 251  Q
    ||| |||||||  ||||||  ||||||||||||||| |||||||||| |||||| | ||||| ||||||||| ||||||| |||||| ||||||||| |     
T  37237231 ttggaccaaatttaataaa--aaataagttaagggatgtgtttgagagagttaagacttatgagaccaaattaaataaaagaaataaattaagggacggg 37237328  T
Q  252 cagatcaattaagcca 267  Q
    ||||||||||||||||    
T  37237329 cagatcaattaagcca 37237344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 62 - 261
Target Start/End: Complemental strand, 32518616 - 32518426
Alignment:
Q  62 aataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaaaattgaaccaaa 161  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||  |||||||| |||||||||||         ||||||||    
T  32518616 aataaattaggtgttggtgatacactataaaatctgatagacctccgtaatccaacggtctttttttttaggggattaaaatt---------gaaccaaa 32518526  T
Q  162 tggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatcaatt 261  Q
    | ||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||||||||| |||||| |||||||||||| |||||||||    
T  32518525 ttgaataaaagaaataatttaagggacgtgtttgagaaagttaagatttatgggaccaaattgaataaaagaaataaattaagggaccgatagatcaatt 32518426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 31 - 272
Target Start/End: Complemental strand, 43961165 - 43960939
Alignment:
Q  31 atgaagatgaggaaagggaaagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcatttttt 130  Q
    |||||||||||| |||   ||||||||||||||||||||||||||| ||||||||||||||||| | ||||||||  |||||||||||||||  |||| |    
T  43961165 atgaagatgagggaag---aagaagaaagtaaataaattaggtgttagtgatacactataaaatctgatagacctttgtaatccaacggtctgtttttgt 43961069  T
Q  131 agaggattaaaattatcaaaattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaa 230  Q
    |||||||||||||||||||||||| | ||||| ||||||||||||||| |||||||||||||||||||            | | ||||||||||||||||    
T  43961068 agaggattaaaattatcaaaattggatcaaattgaataaaagaaataaattaagggacgtgtttgaga------------acgagaccaaattgaataaa 43960981  T
Q  231 ataaataagttaagggaccgacagatcaattaagccaaaaat 272  Q
    | |||||||||||||||||||||||||||||||||| |||||    
T  43960980 agaaataagttaagggaccgacagatcaattaagcctaaaat 43960939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 61 - 270
Target Start/End: Complemental strand, 44746931 - 44746722
Alignment:
Q  61 aaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaaaattgaaccaa 160  Q
    ||||||||||||||||| | |||||||||||||| | |||||||||||||||||||||||||| |||| ||  ||||||||||||||||||||  |||||    
T  44746931 aaataaattaggtgttgataatacactataaaatatgatagacctccgtaatccaacggtctctttttctaagggattaaaattatcaaaatttgaccaa 44746832  T
Q  161 atggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatcaat 260  Q
    || |||||||||||||||||||| | || ||||||||||| |||| | ||||  || |||||||||||||| |||||||||||| |||||||||||||||    
T  44746831 attgaataaaagaaataagttaacgaacatgtttgagaaaattaagacttataagatcaaattgaataaaaaaaataagttaagagaccgacagatcaat 44746732  T
Q  261 taagccaaaa 270  Q
    ||| ||||||    
T  44746731 taaaccaaaa 44746722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 53 - 271
Target Start/End: Original strand, 3538478 - 3538686
Alignment:
Q  53 aagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaaaat 152  Q
    ||||||||||||||||||| ||||||||||||||  |||||||| ||||| |||||||||||||||||||| |||||||| ||| |||||||||||||||    
T  3538478 aagaaagtaaataaattagatgttggtgatacaccgtaaaatttgatagatctccgtaatccaacggtctctttttttaggggactaaaattatcaaaat 3538577  T
Q  153 tgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgac 252  Q
    ||||          |||||||||||||| ||  |||||||||||||||||||| | ||||| ||||||||||||||||| |||||||||||||||||| |    
T  3538578 tgaa----------taaaagaaataagtgaaaagacgtgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaagggaccggc 3538667  T
Q  253 agatcaattaagccaaaaa 271  Q
     ||||||||||||||||||    
T  3538668 ggatcaattaagccaaaaa 3538686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 9 - 188
Target Start/End: Complemental strand, 13749258 - 13749081
Alignment:
Q  9 gaagaatattgttgaaggttgcatgaagatgaggaaagggaaagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccg 108  Q
    |||||| ||||||||| |||| |||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||| ||    
T  13749258 gaagaaaattgttgaacgttgtatgaagat-aggaaagagaaagaagaaattaaataaattaggtgttggtgatacactagaaa-ttttatagacctacg 13749161  T
Q  109 taatccaacggtctcattttttagaggattaaaattatcaaaattgaaccaaatggaataaaagaaataagttaagggac 188  Q
    |||| |||||||||||||||||||||||||||||||||||||||| || |||||  |||| ||||||||||||| |||||    
T  13749160 taattcaacggtctcattttttagaggattaaaattatcaaaattaaatcaaattaaatataagaaataagttatgggac 13749081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 68 - 266
Target Start/End: Complemental strand, 44230625 - 44230427
Alignment:
Q  68 ttaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaaaattgaaccaaatggaat 167  Q
    |||||||||| ||||||||| |||||| | ||||||||| |||||||||||||||| |||  ||| ||||| ||||||| ||||||| ||||||| ||||    
T  44230625 ttaggtgttgatgatacactgtaaaatctgatagacctctgtaatccaacggtctcttttcgtaggggattgaaattattaaaattggaccaaattgaat 44230526  T
Q  168 aaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatcaattaagcc 266  Q
    |||||||||||||||| ||||||| ||||||||||||||| |||||| || ||||||||||||| ||||||  ||||||| || |||||||||||||||    
T  44230525 aaaagaaataagttaaaggacgtgattgagaaagttaaaacttatggaactaaattgaataaaagaaataatctaagggatcggcagatcaattaagcc 44230427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 52 - 188
Target Start/End: Complemental strand, 26005565 - 26005429
Alignment:
Q  52 gaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaaaa 151  Q
    |||||||||| |||||||| ||||||||||||||||||||||| ||||||||||  |||||||||||||||| |||||||| ||| ||||||||||||||    
T  26005565 gaagaaagtacataaattacgtgttggtgatacactataaaatcttatagacctttgtaatccaacggtctctttttttagtggagtaaaattatcaaaa 26005466  T
Q  152 ttgaaccaaatggaataaaagaaataagttaagggac 188  Q
    ||||||||||| |||||||||||||||||||||||||    
T  26005465 ttgaaccaaattgaataaaagaaataagttaagggac 26005429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 50 - 188
Target Start/End: Original strand, 44748465 - 44748603
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaa 149  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||| ||||| |||| ||| ||||||||||||||||    
T  44748465 aagaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagaccttcgtaatccaacagtctccttttctaggggattaaaattatcaa 44748564  T
Q  150 aattgaaccaaatggaataaaagaaataagttaagggac 188  Q
    ||||| |||| || ||||||||||||||| |||||||||    
T  44748565 aattggaccatattgaataaaagaaataaattaagggac 44748603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 31 - 245
Target Start/End: Complemental strand, 12630799 - 12630584
Alignment:
Q  31 atgaagatgaggaaagggaaagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcatttttt 130  Q
    |||||||||||| |||   ||||||||||||||||||||||||||| ||||| ||  ||||||| | ||| ||||| |||||||||| ||||| |||| |    
T  12630799 atgaagatgagggaagaagaagaagaaagtaaataaattaggtgttagtgatccataataaaatctgatatacctctgtaatccaacagtctctttttct 12630700  T
Q  131 agaggattaaaattatcaaaattgaaccaaatggaataaaagaaataa-gttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataa 229  Q
    || ||||||||||||||||||||  ||||||| |||||||| ||| || |||||||||||||||||||||| |||| | || || |||||||||||| ||    
T  12630699 aggggattaaaattatcaaaattagaccaaattgaataaaaaaaaaaaggttaagggacgtgtttgagaaaattaagacttttgagaccaaattgaagaa 12630600  T
Q  230 aataaataagttaagg 245  Q
    || | |||||||||||    
T  12630599 aagacataagttaagg 12630584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 31 - 185
Target Start/End: Original strand, 43114970 - 43115124
Alignment:
Q  31 atgaagatgaggaaagggaaagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcatttttt 130  Q
    |||||||||||| |||   ||||||||||||||||||||||||  || |||| ||||||||||| | |||||| || |||||||||||||||  ||||||    
T  43114970 atgaagatgagggaagaagaagaagaaagtaaataaattaggttatgatgatgcactataaaatctgatagacttcagtaatccaacggtcttctttttt 43115069  T
Q  131 agaggattaaaattatcaaaattgaaccaaatggaataaaagaaataagttaagg 185  Q
    |  ||||||||||||||||||||| | ||||| ||||||||||||||||||||||    
T  43115070 aagggattaaaattatcaaaattggatcaaattgaataaaagaaataagttaagg 43115124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 173 - 267
Target Start/End: Complemental strand, 45688960 - 45688866
Alignment:
Q  173 aaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatcaattaagcca 267  Q
    |||| |||||||||| ||||||||||||||||| | ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  45688960 aaatgagttaagggatgtgtttgagaaagttaagacttatgtgaccaaattgaataaaagaaataagttaagggaccgacagatcaattaagcca 45688866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 138 - 266
Target Start/End: Complemental strand, 37235941 - 37235813
Alignment:
Q  138 taaaattatcaaaattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaata 237  Q
    ||||||| ||||||||| ||||||| |||| ||||||||||||||||||||| |||||||||||||   | |||||| |||||||| ||||||| |||||    
T  37235941 taaaattctcaaaattggaccaaattgaatcaaagaaataagttaagggacgcgtttgagaaagttgggatttatggaaccaaattaaataaaagaaata 37235842  T
Q  238 agttaagggaccgacagatcaattaagcc 266  Q
    ||||||||||||| |||  ||||||||||    
T  37235841 agttaagggaccggcaggccaattaagcc 37235813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 50 - 183
Target Start/End: Original strand, 13599159 - 13599293
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagag-gattaaaattatca 148  Q
    |||||||||||||||||||||||||||  |||||||||||||||| | ||||||||||||||||||||  | |  ||||||  ||  |||||||||||||    
T  13599159 aagaagaaagtaaataaattaggtgttactgatacactataaaatctgatagacctccgtaatccaacaattttttttttttaagatattaaaattatca 13599258  T
Q  149 aaattgaaccaaatggaataaaagaaataagttaa 183  Q
    |||||| | ||||| ||||||||||||||||||||    
T  13599259 aaattggagcaaattgaataaaagaaataagttaa 13599293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 26006773 - 26006861
Alignment:
Q  178 agttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatcaattaagcc 266  Q
    |||||||||| ||||||| || |||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  26006773 agttaagggatgtgtttgtgatagttaaaacttatgggaccaaattgaacaaaagaaataagttaagggaccgacagatcaattaagcc 26006861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 176 - 272
Target Start/End: Complemental strand, 19009021 - 19008925
Alignment:
Q  176 taagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatcaattaagccaaaaat 272  Q
    |||||||||||||| | |||| ||| |||| | |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||    
T  19009021 taagttaagggacgcgattgacaaatttaatacttatgggaccaaattgaaaaaaagaaataagttaagggaccgacagatcaattaagcctaaaat 19008925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 156 - 271
Target Start/End: Complemental strand, 12630613 - 12630498
Alignment:
Q  156 accaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacaga 255  Q
    ||||||| ||| |||||| ||||||||||| || |||||||||||||||| | ||||| ||||||||||||||||| | ||||||||| ||||||||| |    
T  12630613 accaaattgaagaaaagacataagttaaggaacatgtttgagaaagttaagacttatgagaccaaattgaataaaagacataagttaaaggaccgacata 12630514  T
Q  256 tcaattaagccaaaaa 271  Q
    |||||||  |||||||    
T  12630513 tcaattataccaaaaa 12630498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 176 - 266
Target Start/End: Original strand, 19016725 - 19016815
Alignment:
Q  176 taagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatcaattaagcc 266  Q
    |||||||||||||||| |||| ||| |||| | |||||||||||||||||| |||| |||||| |||||||||||||||||||||||||||    
T  19016725 taagttaagggacgtggttgacaaatttaatacttatgggaccaaattgaaaaaaagaaataaattaagggaccgacagatcaattaagcc 19016815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 198 - 268
Target Start/End: Original strand, 44231892 - 44231962
Alignment:
Q  198 aaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatcaattaagccaa 268  Q
    |||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  44231892 aaagttaagatttatgggaccaaattgaataaaagaaataagttaagggaccgacagatcaattaagccaa 44231962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 189 - 266
Target Start/End: Complemental strand, 42611512 - 42611435
Alignment:
Q  189 gtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatcaattaagcc 266  Q
    ||||||||||||||||||| |||||| |||||||||||||||| ||||||||||| |||||| |||||||||||||||    
T  42611512 gtgtttgagaaagttaaaacttatggaaccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcc 42611435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 178 - 265
Target Start/End: Original strand, 7057359 - 7057446
Alignment:
Q  178 agttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatcaattaagc 265  Q
    |||| ||||| ||||||| ||  ||||||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  7057359 agttgagggatgtgtttgtgacggttaaaacttatgggaccaaattgaataaaagaaataagttaagggaccggcagatcaattaagc 7057446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 27071108 - 27071020
Alignment:
Q  178 agttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatcaattaagcc 266  Q
    |||||||||| ||||||| ||  ||||||| ||||||||||||||||||||||| |||||||||||  ||||| |||||||||||||||    
T  27071108 agttaagggatgtgtttgtgactgttaaaacttatgggaccaaattgaataaaagaaataagttaaatgaccggcagatcaattaagcc 27071020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 27207205 - 27207293
Alignment:
Q  178 agttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatcaattaagcc 266  Q
    |||||||||| ||||||| ||  ||||||| ||||||||||||||||||||||| |||||||||||  ||||| |||||||||||||||    
T  27207205 agttaagggatgtgtttgtgactgttaaaacttatgggaccaaattgaataaaagaaataagttaaatgaccggcagatcaattaagcc 27207293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 9357679 - 9357739
Alignment:
Q  31 atgaagatgaggaaagggaaagaagaaagtaaataaattaggtgttggtgatacactataa 91  Q
    ||||||||||||||||   | ||||||||||||||||||||||||||||||||||||||||    
T  9357679 atgaagatgaggaaagaagatgaagaaagtaaataaattaggtgttggtgatacactataa 9357739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 52 - 132
Target Start/End: Complemental strand, 45398737 - 45398657
Alignment:
Q  52 gaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttag 132  Q
    |||||||||||||||||||| ||||||||||||||||||| |||| ||| |||||| | |||||| | |||| ||||||||    
T  45398737 gaagaaagtaaataaattagatgttggtgatacactataagatttgataaacctcccttatccaatgatctccttttttag 45398657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 61 - 144
Target Start/End: Original strand, 19218897 - 19218980
Alignment:
Q  61 aaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaatt 144  Q
    ||||||||||||||||||||||||||| | |||| | || ||||||  | ||||||||||||| ||||| ||||||||||||||    
T  19218897 aaataaattaggtgttggtgatacactgttaaatctcatggacctcttttatccaacggtctcctttttcagaggattaaaatt 19218980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 216 - 265
Target Start/End: Complemental strand, 26005461 - 26005412
Alignment:
Q  216 accaaattgaataaaataaataagttaagggaccgacagatcaattaagc 265  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  26005461 accaaattgaataaaagaaataagttaagggaccggcagatcaattaagc 26005412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 52 - 94
Target Start/End: Original strand, 44231765 - 44231807
Alignment:
Q  52 gaagaaagtaaataaattaggtgttggtgatacactataaaat 94  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  44231765 gaagaaagtaaataaatcaggtgttggtgatacactataaaat 44231807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 210 - 270
Target Start/End: Complemental strand, 45398598 - 45398538
Alignment:
Q  210 tatgggaccaaattgaataaaataaataagttaagggaccgacagatcaattaagccaaaa 270  Q
    ||||||||||||| |||  ||| || |||||||||||||||||||||||||||| ||||||    
T  45398598 tatgggaccaaatcgaaataaagaagtaagttaagggaccgacagatcaattaaaccaaaa 45398538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 56 - 111
Target Start/End: Complemental strand, 37235994 - 37235939
Alignment:
Q  56 aaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaa 111  Q
    |||||||||||||||||||||||||||||| | |||||| | || |||||||||||    
T  37235994 aaagtaaataaattaggtgttggtgatacattgtaaaatctgattgacctccgtaa 37235939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 52 - 89
Target Start/End: Complemental strand, 45689060 - 45689023
Alignment:
Q  52 gaagaaagtaaataaattaggtgttggtgatacactat 89  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  45689060 gaagaaagtaaataaattaagtgttggtgatacactat 45689023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 210 - 270
Target Start/End: Original strand, 24653733 - 24653793
Alignment:
Q  210 tatgggaccaaattgaataaaataaataagttaagggaccgacagatcaattaagccaaaa 270  Q
    ||||||||||| || ||||||| || |||||||||||||||   |||||||||||||||||    
T  24653733 tatgggaccaatttaaataaaagaattaagttaagggaccggaggatcaattaagccaaaa 24653793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 214 - 270
Target Start/End: Original strand, 44748569 - 44748625
Alignment:
Q  214 ggaccaaattgaataaaataaataagttaagggaccgacagatcaattaagccaaaa 270  Q
    |||||| ||||||||||| |||||| ||||||||| | |||||| ||||||||||||    
T  44748569 ggaccatattgaataaaagaaataaattaagggactggcagatcgattaagccaaaa 44748625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 271
Target Start/End: Original strand, 13599268 - 13599321
Alignment:
Q  218 caaattgaataaaataaataagttaagggaccgacagatcaattaagccaaaaa 271  Q
    |||||||||||||| ||||||||||| |||  | ||||||||||| ||||||||    
T  13599268 caaattgaataaaagaaataagttaaaggattggcagatcaattatgccaaaaa 13599321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 156 - 188
Target Start/End: Original strand, 7057397 - 7057429
Alignment:
Q  156 accaaatggaataaaagaaataagttaagggac 188  Q
    ||||||| |||||||||||||||||||||||||    
T  7057397 accaaattgaataaaagaaataagttaagggac 7057429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 233 - 265
Target Start/End: Original strand, 9357862 - 9357894
Alignment:
Q  233 aaataagttaagggaccgacagatcaattaagc 265  Q
    ||||||||||||||| |||||||||||||||||    
T  9357862 aaataagttaagggatcgacagatcaattaagc 9357894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 218 - 266
Target Start/End: Complemental strand, 13749111 - 13749063
Alignment:
Q  218 caaattgaataaaataaataagttaagggaccgacagatcaattaagcc 266  Q
    |||||| |||| || |||||||||| ||||||| |||||||||||||||    
T  13749111 caaattaaatataagaaataagttatgggaccgccagatcaattaagcc 13749063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 156 - 188
Target Start/End: Original strand, 44231910 - 44231942
Alignment:
Q  156 accaaatggaataaaagaaataagttaagggac 188  Q
    ||||||| |||||||||||||||||||||||||    
T  44231910 accaaattgaataaaagaaataagttaagggac 44231942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 156 - 188
Target Start/End: Complemental strand, 45688917 - 45688885
Alignment:
Q  156 accaaatggaataaaagaaataagttaagggac 188  Q
    ||||||| |||||||||||||||||||||||||    
T  45688917 accaaattgaataaaagaaataagttaagggac 45688885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 176; Significance: 1e-94; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 50 - 273
Target Start/End: Complemental strand, 51693363 - 51693140
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaa 149  Q
    |||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||| |||||||| | ||||||||||||||    
T  51693363 aagaagaaagtaaataaattaggtgttggtgatacactataaaatccgatagacctccgtaatccaacggtctctttttttagggtattaaaattatcaa 51693264  T
Q  150 aattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggacc 249  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||||    
T  51693263 aattgaaccaaattgaataaaagaaataagttaaaggacgtgtttgagaaagttaagacttatgggaccaaattgaataaaagaaataagttaagggacc 51693164  T
Q  250 gacagatcaattaagccaaaaata 273  Q
    ||||||||||||||||| ||||||    
T  51693163 gacagatcaattaagcctaaaata 51693140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 49 - 271
Target Start/End: Complemental strand, 52086842 - 52086622
Alignment:
Q  49 aaagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatca 148  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |  |||||||| ||||||||||||| |    
T  52086842 aaagaagaaagtaaaaaaattaggtgatggtgatacactataaaattttatagaccttcgtaatccaacggttt--ttttttaggggattaaaattatta 52086745  T
Q  149 aaattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggac 248  Q
    |||||| || |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  52086744 aaattggactaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaaaacttatgggaccaaattgaataaaagaaataagttaagggac 52086645  T
Q  249 cgacagatcaattaagccaaaaa 271  Q
    || ||||||||||||||| ||||    
T  52086644 cggcagatcaattaagcctaaaa 52086622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 31 - 271
Target Start/End: Complemental strand, 51468574 - 51468334
Alignment:
Q  31 atgaagatgaggaaagggaaagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcatttttt 130  Q
    |||||||||||| |||   ||||| |||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||| |  |||  ||||||    
T  51468574 atgaagatgagggaagaagaagaaaaaagtaaataaattgggtgttggtgatacactataaaatctgatagacctccgtaatccatcaatcttttttttt 51468475  T
Q  131 agaggattaaaattatcaaaattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaa 230  Q
    || ||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||||    
T  51468474 aggggattaaaattattaaaattggaccaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgagaccaaattgaataaa 51468375  T
Q  231 ataaataagttaagggaccgacagatcaattaagccaaaaa 271  Q
    | |||||||||||||||||| ||||||||||||||||||||    
T  51468374 aaaaataagttaagggaccggcagatcaattaagccaaaaa 51468334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 61 - 275
Target Start/End: Original strand, 5488780 - 5488994
Alignment:
Q  61 aaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaaaattgaaccaa 160  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| ||  ||||||||||||||||||||| |||||    
T  5488780 aaataaattaggtgttggtgatacactataaaatttgatagacctccgtaatccaacggtctctttttctaagggattaaaattatcaaaattggaccaa 5488879  T
Q  161 atggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatcaat 260  Q
    || |||||||||||||||||||| | ||||||||||||||||||| | ||||||||| ||||||||||||| ||||||||||||||| || | |||||||    
T  5488880 attgaataaaagaaataagttaatgaacgtgtttgagaaagttaagacttatgggactaaattgaataaaagaaataagttaagggatcggcggatcaat 5488979  T
Q  261 taagccaaaaataaa 275  Q
    ||||||||| |||||    
T  5488980 taagccaaatataaa 5488994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 31 - 268
Target Start/End: Complemental strand, 17244410 - 17244173
Alignment:
Q  31 atgaagatgaggaaagggaaagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcatttttt 130  Q
    |||||||||||| |||   |||||||||||||||||||||||| | ||||||||| |||||||| | |||||||||||||||||||||||||| ||||||    
T  17244410 atgaagatgagggaagaagaagaagaaagtaaataaattaggtatcggtgatacattataaaatctgatagacctccgtaatccaacggtctcttttttt 17244311  T
Q  131 agaggattaaaattatcaaaattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaa 230  Q
    ||  |||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||    
T  17244310 aggagattaaaattatcaaaattggaccaaattgaatcaaagaaataagttaagggacgtgtttgagaaagttgagacttatgggaccaaattgaataaa 17244211  T
Q  231 ataaataagttaagggaccgacagatcaattaagccaa 268  Q
    | ||||||||||||| |||| ||| | |||||||||||    
T  17244210 agaaataagttaaggaaccggcaggttaattaagccaa 17244173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 50 - 266
Target Start/End: Complemental strand, 7110442 - 7110226
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaa 149  Q
    ||||||||||||||||||||||| |||| |||||||||||||||| | ||||||||||| ||||||||| |||| |||||||| ||||||||||||||||    
T  7110442 aagaagaaagtaaataaattaggcgttgatgatacactataaaatctgatagacctccgcaatccaacgatctctttttttaggggattaaaattatcaa 7110343  T
Q  150 aattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggacc 249  Q
    ||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||| | |||| |||||||||| ||||||| |||||| ||||||||||    
T  7110342 aattggaccaaattgaataaaagaaatcagttaagggacgtgtttgagaaagttaagacttataggaccaaattaaataaaagaaataaattaagggacc 7110243  T
Q  250 gacagatcaattaagcc 266  Q
    | |||||||||||||||    
T  7110242 ggcagatcaattaagcc 7110226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 50 - 275
Target Start/End: Original strand, 7111377 - 7111601
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaa 149  Q
    |||||||||||||||||||||||||||| |||||||||||||||| | |||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  7111377 aagaagaaagtaaataaattaggtgttgatgatacactataaaatctgatagacctccgtaatccaacggtctctttttttaggggattaaaattatcaa 7111476  T
Q  150 aattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggacc 249  Q
    ||||| ||||||| ||||||||||||| |||||| ||||||||||||||||||||| | |||| |||||||||||||||||| |||||| |||||| |||    
T  7111477 aattggaccaaattgaataaaagaaatcagttaatggacgtgtttgagaaagttaagacttataggaccaaattgaataaaagaaataaattaaggaacc 7111576  T
Q  250 gacagatcaattaagccaaaaataaa 275  Q
    |  |||| ||||||| |||| |||||    
T  7111577 gggagat-aattaagtcaaatataaa 7111601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 50 - 266
Target Start/End: Original strand, 51468803 - 51469019
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaa 149  Q
    |||||||||||||||||||||||||||||||||||||| |||||| | ||||| ||||||||||||| | | |  |||||||| ||||||||||||| ||    
T  51468803 aagaagaaagtaaataaattaggtgttggtgatacactgtaaaatctaatagatctccgtaatccaatgctttttttttttaggggattaaaattattaa 51468902  T
Q  150 aattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggacc 249  Q
    ||||| ||||||| ||||| |||||||||||| |||||||||||||| |||||||| | ||||||||||||||||||||||| ||||||||||||||||     
T  51468903 aattggaccaaattgaatagaagaaataagtttagggacgtgtttgaaaaagttaagatttatgggaccaaattgaataaaaaaaataagttaagggact 51469002  T
Q  250 gacagatcaattaagcc 266  Q
    |||||||||||||||||    
T  51469003 gacagatcaattaagcc 51469019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 53 - 263
Target Start/End: Original strand, 45229508 - 45229718
Alignment:
Q  53 aagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaaaat 152  Q
    |||||| ||||||||||||||||||||||| || |||||||| | ||||||||||||||||||||  |||  ||||||| ||||||||||||||||||||    
T  45229508 aagaaactaaataaattaggtgttggtgatccattataaaatctgatagacctccgtaatccaacaatctttttttttataggattaaaattatcaaaat 45229607  T
Q  153 tgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgac 252  Q
    || | ||||| ||||||||||||||||||||||||||||||||||||| |||| | ||||| ||||||||||||||||| |||||| |||||||||||||    
T  45229608 tggatcaaattgaataaaagaaataagttaagggacgtgtttgagaaaattaagatttatgagaccaaattgaataaaagaaataaattaagggaccgac 45229707  T
Q  253 agatcaattaa 263  Q
    |||||||||||    
T  45229708 agatcaattaa 45229718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 65 - 260
Target Start/End: Original strand, 50484913 - 50485108
Alignment:
Q  65 aaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaaaattgaaccaaatgg 164  Q
    ||||||||||||||||||||||| |||||| | ||||||||  ||||||||| |||||| |||||||| ||||||||||||||||||||| ||||||| |    
T  50484913 aaattaggtgttggtgatacactgtaaaatctgatagacctatgtaatccaatggtctctttttttaggggattaaaattatcaaaattggaccaaattg 50485012  T
Q  165 aataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatcaat 260  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||||  |||||||||||||||||| |||||||||    
T  50485013 aataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgagaccaaattgaataaatgaaataagttaagggaccggcagatcaat 50485108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 31 - 266
Target Start/End: Complemental strand, 52759598 - 52759363
Alignment:
Q  31 atgaagatgaggaaagggaaagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcatttttt 130  Q
    |||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||| |||||||||||||||||    
T  52759598 atgaagatgagggaagaagaagaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagacctctgtaattcaacggtctcatttttt 52759499  T
Q  131 agaggattaaaattatcaaaattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaa 230  Q
    |   |||||||||||||||||||| || |||| |||||||| | ||||||||| |||||| |||||||||||||| | |||||  |||||||| ||||||    
T  52759498 aagagattaaaattatcaaaattggactaaattgaataaaatagataagttaatggacgtttttgagaaagttaagacttatgaaaccaaattaaataaa 52759399  T
Q  231 ataaataagttaagggaccgacagatcaattaagcc 266  Q
    | ||||||||||||||| || |||||||||||||||    
T  52759398 agaaataagttaagggatcggcagatcaattaagcc 52759363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 31 - 258
Target Start/End: Complemental strand, 45228510 - 45228283
Alignment:
Q  31 atgaagatgaggaaagggaaagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcatttttt 130  Q
    |||||||||||| |||   ||||||||||||||||||||| | ||| ||||||||||||||||||| ||||| |||||||||||||||||||| ||||||    
T  45228510 atgaagatgagggaagaagaagaagaaagtaaataaattaagcgtttgtgatacactataaaatttgatagatctccgtaatccaacggtctcttttttt 45228411  T
Q  131 agaggattaaaattatcaaaattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaa 230  Q
    || ||||||||||||| ||||||| ||||||| |||||||||||||||||||| | |||||||||| || ||||||| ||||||||| ||||| ||||||    
T  45228410 aggggattaaaattattaaaattggaccaaattgaataaaagaaataagttaaagaacgtgtttgataaggttaaaatttatgggacaaaattaaataaa 45228311  T
Q  231 ataaataagttaagggaccgacagatca 258  Q
    | ||||||||||| | |||| |||||||    
T  45228310 agaaataagttaaagaaccggcagatca 45228283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 65 - 265
Target Start/End: Complemental strand, 5488702 - 5488502
Alignment:
Q  65 aaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaaaattgaaccaaatgg 164  Q
    |||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||| |||| ||  ||||||||||||||||||||| | ||||| |    
T  5488702 aaattacgtgttggtgatacactataaaatctgatagacctccgtaatccaacggtctctttttctaagggattaaaattatcaaaattggatcaaattg 5488603  T
Q  165 aataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatcaattaag 264  Q
    ||||||||||||||||||| |||||||||||||||||||||   |||||| | |||||||||||||| |||||| |||||||||| ||||||||||||||    
T  5488602 aataaaagaaataagttaaaggacgtgtttgagaaagttaagtcttatggaatcaaattgaataaaagaaataaattaagggaccaacagatcaattaag 5488503  T
Q  265 c 265  Q
    |    
T  5488502 c 5488502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 68 - 266
Target Start/End: Complemental strand, 40187800 - 40187603
Alignment:
Q  68 ttaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaaaattgaaccaaatggaat 167  Q
    ||||||||||||||||||| ||||||| | |||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||| ||||||| || |    
T  40187800 ttaggtgttggtgatacacgataaaatctgatagacctccgtaatccaacggtctctttttttaggggattaaaattataaaaattggaccaaattgagt 40187701  T
Q  168 aaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatcaattaagcc 266  Q
    |||||||||||||||| |||| ||||||| |||||||| | ||||||||||||||||||||||| |||||||| || |||||| |||||||||||||||    
T  40187700 aaaagaaataagttaa-ggacatgtttgataaagttaagacttatgggaccaaattgaataaaagaaataagtgaaaggaccgtcagatcaattaagcc 40187603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 53 - 249
Target Start/End: Original strand, 52087679 - 52087875
Alignment:
Q  53 aagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaaaat 152  Q
    |||||| |||||||||||| ||||||||||||||  |||||||| ||||||||||||||| |||||||||| |||||||| ||| |||||||||||||||    
T  52087679 aagaaattaaataaattagatgttggtgatacaccgtaaaatttgatagacctccgtaattcaacggtctctttttttaggggactaaaattatcaaaat 52087778  T
Q  153 tgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggacc 249  Q
    |||| ||||| ||||||||||||||||| || ||||||||||||||||||||| |  |||| ||||||||||||||||| |||||||||||| ||||    
T  52087779 tgaatcaaattgaataaaagaaataagtgaaaggacgtgtttgagaaagttaagacatatgagaccaaattgaataaaagaaataagttaagagacc 52087875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 31 - 250
Target Start/End: Original strand, 38235033 - 38235251
Alignment:
Q  31 atgaagatgaggaaagggaaagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcatttttt 130  Q
    |||||||||||| |||   |||||||||||||||||||||||||||||||||||||| |||||| |||||||| | |||||||||||||| |  ||||||    
T  38235033 atgaagatgagggaagaagaagaagaaagtaaataaattaggtgttggtgatacactgtaaaatcttatagacattcgtaatccaacggtttgttttttt 38235132  T
Q  131 agaggattaaaattatcaaaattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaa 230  Q
     | |||||||| |||| ||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||| | ||||  ||||||||||||||||    
T  38235133 tg-ggattaaacttattaaaattggaccaaatttaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatatgaccaaattgaataaa 38235231  T
Q  231 ataaataagttaagggaccg 250  Q
    | |||||| |||||||||||    
T  38235232 agaaataaattaagggaccg 38235251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 68 - 266
Target Start/End: Complemental strand, 18819460 - 18819262
Alignment:
Q  68 ttaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaaaattgaaccaaatggaat 167  Q
    ||||||||||||||||||||||||||| | ||| ||||||||||||||||||| || |||  ||| ||||||||||||| |||||||  |||||| ||||    
T  18819460 ttaggtgttggtgatacactataaaatctgatatacctccgtaatccaacggtttcttttcataggggattaaaattattaaaattgggccaaattgaat 18819361  T
Q  168 aaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatcaattaagcc 266  Q
    ||||||||||| |||||||||||| ||||||||||||| | |||||||| |||||||||||||| |||||| |||||| |||| |||||||||||||||    
T  18819360 aaaagaaataaattaagggacgtgattgagaaagttaagacttatgggatcaaattgaataaaaaaaataatttaaggaaccggcagatcaattaagcc 18819262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 61 - 256
Target Start/End: Complemental strand, 1822114 - 1821918
Alignment:
Q  61 aaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaaaattgaaccaa 160  Q
    ||||||||||||||||  ||||||||||||||||   |||||||| ||||| ||||||||||| ||||||| |||||||||||||||||||||  || ||    
T  1822114 aaataaattaggtgttaatgatacactataaaatcagatagaccttcgtaacccaacggtctctttttttaaaggattaaaattatcaaaattagactaa 1822015  T
Q  161 atggaataaaagaaa-taagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagat 256  Q
    ||  ||||||| ||| |||||||||||||||||||||||||||||||| |||| |||| ||||||||||||| |||||| |||||| ||||||||||    
T  1822014 attaaataaaaaaaaataagttaagggacgtgtttgagaaagttaaaatttataggacaaaattgaataaaaaaaataaattaaggaaccgacagat 1821918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 52 - 264
Target Start/End: Original strand, 47533758 - 47533970
Alignment:
Q  52 gaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaaaa 151  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||| |||  ||||  ||||||||  |||||| |||||||| |||||||||||    
T  47533758 gaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagatctctctaatttaacggtctatttttttggaggattataattatcaaaa 47533857  T
Q  152 ttgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccga 251  Q
    ||||| ||||| |||| || ||||||| ||||| ||||| ||||| |||||||||| ||||||||| ||||| ||||||| |||||| ||||| ||||      
T  47533858 ttgaatcaaattgaatgaatgaaataatttaagagacgtatttgaaaaagttaaaacttatgggactaaattaaataaaagaaataatttaagagaccag 47533957  T
Q  252 cagatcaattaag 264  Q
    |||||||||||||    
T  47533958 cagatcaattaag 47533970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 67 - 266
Target Start/End: Original strand, 1823215 - 1823410
Alignment:
Q  67 attaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaaaattgaaccaaatggaa 166  Q
    |||||||||||||||||||||||||||| | |||||||| |||||||||||||| |   |||||||| |||||||||||||||||||| | ||||| |||    
T  1823215 attaggtgttggtgatacactataaaatctgatagaccttcgtaatccaacggtttatctttttagaagattaaaattatcaaaattggatcaaattgaa 1823314  T
Q  167 taaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatcaattaagcc 266  Q
    ||||| |||||||||||| ||| |||||||||   |||| | ||||| ||| ||||||||||||| |||||||||||||||||| |||||||||||||||    
T  1823315 taaaa-aaataagttaagcgacatgtttgaga---ttaagacttatgtgactaaattgaataaaagaaataagttaagggaccggcagatcaattaagcc 1823410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 50 - 276
Target Start/End: Complemental strand, 50483726 - 50483501
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcatttttt-agaggattaaaattatca 148  Q
    |||||||||||||||||||||||||||||| |||||| ||||||| |  ||||| ||||||||||||| ||||| |||||| || ||| ||||||||| |    
T  50483726 aagaagaaagtaaataaattaggtgttggttatacacgataaaatctg-tagacttccgtaatccaacagtctcttttttttaggggagtaaaattataa 50483628  T
Q  149 aaattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggac 248  Q
    |||||| ||||||| ||||||||||||||| ||||  ||||| ||| ||||| |||| | ||||| |||||||||||||| || |||||||||||  |||    
T  50483627 aaattggaccaaattgaataaaagaaataaattaaatgacgtttttaagaaaattaagacttatgagaccaaattgaatacaagaaataagttaa-agac 50483529  T
Q  249 cgacagatcaattaagccaaaaataaat 276  Q
    |||||||||||||||||| || ||||||    
T  50483528 cgacagatcaattaagcctaagataaat 50483501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 54 - 185
Target Start/End: Original strand, 52761502 - 52761633
Alignment:
Q  54 agaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaaaatt 153  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||||||||| |||||||||||||| ||||| || ||||||||||||||||||||    
T  52761502 agaaagtaaataaattaggtgttggtgatacactataaaatctgatagacctccgcaatccaacggtctcttttttcaggggattaaaattatcaaaatt 52761601  T
Q  154 gaaccaaatggaataaaagaaataagttaagg 185  Q
    | ||||||| ||||||||||||||||||||||    
T  52761602 ggaccaaattgaataaaagaaataagttaagg 52761633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 72 - 262
Target Start/End: Complemental strand, 47533150 - 47532961
Alignment:
Q  72 gtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaaaattgaaccaaatggaataaaa 171  Q
    |||||||||||||| |||||||| | |||||| ||| |||| |||| ||||  ||||||||| |||||||||||||||||||||| ||||| |||||||     
T  47533150 gtgttggtgatacattataaaatctgatagacttccataattcaacagtctg-ttttttagaagattaaaattatcaaaattgaatcaaattgaataaat 47533052  T
Q  172 gaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatcaatta 262  Q
    ||||||| |||||| |||||||||| |||||||| | ||||| ||||||||||||||||| |||||| ||||||||||| |||||||||||    
T  47533051 gaaataatttaaggaacgtgtttgataaagttaagatttatgagaccaaattgaataaaaaaaataacttaagggaccggcagatcaatta 47532961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 104 - 266
Target Start/End: Original strand, 17245621 - 17245782
Alignment:
Q  104 ctccgtaatccaacggtctcattttttagaggattaaaattatcaaaattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagtt 203  Q
    |||||||||||||||||||  ||||||||||||||||||| |||||||||| |||||||  ||||||| |||||||||||||||| ||||||||| ||||    
T  17245621 ctccgtaatccaacggtctttttttttagaggattaaaatgatcaaaattggaccaaatttaataaaa-aaataagttaagggacttgtttgagagagtt 17245719  T
Q  204 aaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatcaattaagcc 266  Q
    || | ||||| ||||||||||||||||| |||||| |||||| |||| | |||||||||||||    
T  17245720 aagacttatgagaccaaattgaataaaagaaataaattaaggaaccggcggatcaattaagcc 17245782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 171 - 271
Target Start/End: Complemental strand, 25181596 - 25181496
Alignment:
Q  171 agaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatcaattaagccaaaa 270  Q
    ||||||||||||||||||||||||||||||||||| | |||| |||||||||||||||||| |||||||||||||||||| |||||||||||||| ||||    
T  25181596 agaaataagttaagggacgtgtttgagaaagttaagacttataggaccaaattgaataaaagaaataagttaagggaccggcagatcaattaagcaaaaa 25181497  T
Q  271 a 271  Q
    |    
T  25181496 a 25181496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 31 - 153
Target Start/End: Complemental strand, 21203246 - 21203124
Alignment:
Q  31 atgaagatgaggaaagggaaagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcatttttt 130  Q
    ||||||||||| ||||   || ||||||||||||||||||||||||| |||||||||||||||| | ||||||||  |||||||||||||||| ||||||    
T  21203246 atgaagatgagaaaagaagaataagaaagtaaataaattaggtgttgatgatacactataaaatctgatagacctttgtaatccaacggtctcttttttt 21203147  T
Q  131 agaggattaaaattatcaaaatt 153  Q
    || |||||| |||||| ||||||    
T  21203146 aggggattagaattatgaaaatt 21203124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 198 - 266
Target Start/End: Original strand, 18820806 - 18820874
Alignment:
Q  198 aaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatcaattaagcc 266  Q
    |||||||| | ||||| ||||||||||||||||| ||||||||||||||||||  ||||||||||||||    
T  18820806 aaagttaagatttatgagaccaaattgaataaaagaaataagttaagggaccggtagatcaattaagcc 18820874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 214 - 266
Target Start/End: Original strand, 52761602 - 52761654
Alignment:
Q  214 ggaccaaattgaataaaataaataagttaagggaccgacagatcaattaagcc 266  Q
    |||||||||||||||||| ||||||||||||| |||| || ||||||||||||    
T  52761602 ggaccaaattgaataaaagaaataagttaaggaaccggcatatcaattaagcc 52761654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 99 - 154
Target Start/End: Original strand, 49784941 - 49784996
Alignment:
Q  99 tagacctccgtaatccaacggtctcattttttagaggattaaaattatcaaaattg 154  Q
    ||||| ||||||||||||| ||||| |||||||| ||||||||||||| |||||||    
T  49784941 tagacttccgtaatccaacagtctctttttttaggggattaaaattattaaaattg 49784996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 62 - 144
Target Start/End: Complemental strand, 51088735 - 51088653
Alignment:
Q  62 aataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaatt 144  Q
    ||||||||| ||||||||||||||  || | || | | |||||||| | ||||||||||||| ||||||||  ||||||||||    
T  51088735 aataaattaagtgttggtgatacatgattagatatcacagacctcctttatccaacggtctccttttttaggagattaaaatt 51088653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 129
Target Start/End: Original strand, 18820679 - 18820756
Alignment:
Q  52 gaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttt 129  Q
    ||||||||||||| ||| ||||||| |||||||||||| |||| |  ||||||||  | |||||||| |||| |||||    
T  18820679 gaagaaagtaaatgaatcaggtgttagtgatacactatcaaatctagtagacctcacttatccaacgatctctttttt 18820756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 266
Target Start/End: Complemental strand, 21203012 - 21202963
Alignment:
Q  217 ccaaattgaataaaataaataagttaagggaccgacagatcaattaagcc 266  Q
    |||||||||| ||||||| |||||||||||||||  || |||||||||||    
T  21203012 ccaaattgaagaaaataattaagttaagggaccgggagttcaattaagcc 21202963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 156 - 188
Target Start/End: Original strand, 18820824 - 18820856
Alignment:
Q  156 accaaatggaataaaagaaataagttaagggac 188  Q
    ||||||| |||||||||||||||||||||||||    
T  18820824 accaaattgaataaaagaaataagttaagggac 18820856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 156 - 188
Target Start/End: Complemental strand, 25181551 - 25181519
Alignment:
Q  156 accaaatggaataaaagaaataagttaagggac 188  Q
    ||||||| |||||||||||||||||||||||||    
T  25181551 accaaattgaataaaagaaataagttaagggac 25181519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 162; Significance: 3e-86; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 50 - 267
Target Start/End: Complemental strand, 10803105 - 10802888
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaa 149  Q
    |||||||||||||||||||| ||||||||||||||| |||||||| | ||| |||||||||||||||||||||| |||||||| | ||||||||||||||    
T  10803105 aagaagaaagtaaataaattcggtgttggtgatacaatataaaatctgataaacctccgtaatccaacggtctctttttttagggtattaaaattatcaa 10803006  T
Q  150 aattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggacc 249  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |    
T  10803005 aattggaccaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaaaatttatgggaccaaattgaataaaagaaataagttaagggatc 10802906  T
Q  250 gacagatcaattaagcca 267  Q
    | ||||||||||||||||    
T  10802905 ggcagatcaattaagcca 10802888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 50 - 266
Target Start/End: Original strand, 7261445 - 7261661
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaa 149  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |||||  |||||||| ||||||||||||||||    
T  7261445 aagaagaaagtaaataaattaggtgttggtgatacactataaaatcttatagaccttcgtaatccaatggtctatttttttaggggattaaaattatcaa 7261544  T
Q  150 aattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggacc 249  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||| |||||||||||||||||    
T  7261545 aattggaccaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataagttaagggacc 7261644  T
Q  250 gacagatcaattaagcc 266  Q
    |  ||||||||||||||    
T  7261645 ggtagatcaattaagcc 7261661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 31 - 266
Target Start/End: Complemental strand, 17356596 - 17356361
Alignment:
Q  31 atgaagatgaggaaagggaaagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcatttttt 130  Q
    |||||||||||| |||   ||||||||||||||| || |||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||    
T  17356596 atgaagatgagggaagaagaagaagaaagtaaatgaactaggtgttggtgatacactataaaatctgatagacctccgtaatccaacggtctcttttttt 17356497  T
Q  131 agaggattaaaattatcaaaattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaa 230  Q
    || ||||||||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||| | || ||| | |||||||||||||    
T  17356496 aggggattaaaattatcaaaattggaacaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagatttctggcatcaaattgaataaa 17356397  T
Q  231 ataaataagttaagggaccgacagatcaattaagcc 266  Q
    | ||||||||||||||||||||||||||||||||||    
T  17356396 agaaataagttaagggaccgacagatcaattaagcc 17356361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 50 - 268
Target Start/End: Original strand, 38032322 - 38032540
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaa 149  Q
    |||||||||||||||||||||||||||| |||||||||||||||| | |||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  38032322 aagaagaaagtaaataaattaggtgttgatgatacactataaaatctgatagacctccgtaatccaacggtctctttttttaggggattaaaattatcaa 38032421  T
Q  150 aattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggacc 249  Q
    ||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||| | ||||  ||||||||||||||||| |||||| ||||||||||    
T  38032422 aattggaccaaattgaataaaagaaatcagttaagggacgtgtttgagaaagttaagacttatatgaccaaattgaataaaagaaataaattaagggacc 38032521  T
Q  250 gacagatcaattaagccaa 268  Q
    | |||||||||||||||||    
T  38032522 ggcagatcaattaagccaa 38032540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 158; E-Value: 8e-84
Query Start/End: Original strand, 31 - 266
Target Start/End: Complemental strand, 22622099 - 22621867
Alignment:
Q  31 atgaagatgaggaaagggaaagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcatttttt 130  Q
    |||||||||||| |||   |||||||||||||||||||| ||||| |||||||||||||||||| | |||||||||||||||||||||||||| ||||||    
T  22622099 atgaagatgagggaag---aagaagaaagtaaataaattcggtgtcggtgatacactataaaatctgatagacctccgtaatccaacggtctcttttttt 22622003  T
Q  131 agaggattaaaattatcaaaattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaa 230  Q
    || ||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||| | ||||| ||||||||||||||||    
T  22622002 aggggattaaaattatcaaaattggaccaaattgaataaaagaaataagtaaagggacgtgtttgagaaagttaagacttatgagaccaaattgaataaa 22621903  T
Q  231 ataaataagttaagggaccgacagatcaattaagcc 266  Q
    | |||||||||||||||| | |||||||||||||||    
T  22621902 agaaataagttaagggactggcagatcaattaagcc 22621867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 50 - 266
Target Start/End: Original strand, 34095561 - 34095777
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaa 149  Q
    |||||||||||||||||||||||||| |||||||||||||||||| | ||||||||||||||| |||||||||| |||||||| ||||||||||||||||    
T  34095561 aagaagaaagtaaataaattaggtgtgggtgatacactataaaatctgatagacctccgtaattcaacggtctccttttttaggggattaaaattatcaa 34095660  T
Q  150 aattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggacc 249  Q
    ||||| ||||||| ||| |||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||||| ||||||||||||||||     
T  34095661 aattggaccaaattgaacaaaagaaataagttaagggacgtgtttgagaaagttaagacttatgagaccaaattgaataaaaaaaataagttaagggact 34095760  T
Q  250 gacagatcaattaagcc 266  Q
     | ||||||||||||||    
T  34095761 aatagatcaattaagcc 34095777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 50 - 271
Target Start/End: Complemental strand, 38031384 - 38031163
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaa 149  Q
    |||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||||||| |||||||||  |||||||  ||||||||||||||||    
T  38031384 aagaagaaagtaaataaattaggtgttgatgatacactataaaatctgatagacctccgtaattcaacggtctttttttttatgggattaaaattatcaa 38031285  T
Q  150 aattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggacc 249  Q
    ||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||| | |||| |||||||||||||||||| |||||| ||||||||||    
T  38031284 aattggaccaaattgaataaaagaaatcagttaagggacgtgtttgagaaagttaagacttataggaccaaattgaataaaagaaataaattaagggacc 38031185  T
Q  250 gacagatcaattaagccaaaaa 271  Q
    | ||||||||||||||| ||||    
T  38031184 ggcagatcaattaagcctaaaa 38031163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 50 - 266
Target Start/End: Original strand, 8815259 - 8815475
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaa 149  Q
    |||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||| |  |||||||||||||||||||||||||    
T  8815259 aagaagaaagtaaataaatttggtgttggtgatacactataaaatctgatagacctccgtaatccaacggtttttttttttagaggattaaaattatcaa 8815358  T
Q  150 aattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggacc 249  Q
    ||||| ||||| | ||||| |||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||||| ||||||||||| |||||    
T  8815359 aattggaccaatttgaatagaagaaataagttaagggacgtgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaacggacc 8815458  T
Q  250 gacagatcaattaagcc 266  Q
    | || ||||||||||||    
T  8815459 ggcaaatcaattaagcc 8815475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 52 - 266
Target Start/End: Original strand, 10804099 - 10804313
Alignment:
Q  52 gaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaaaa 151  Q
    ||||||||||||||||||||| |||| ||||||||| |||||| | |||||||||||||||||||||||||  |||||||| ||||||||||||||||||    
T  10804099 gaagaaagtaaataaattaggcgttgatgatacactgtaaaatctgatagacctccgtaatccaacggtctttttttttagtggattaaaattatcaaaa 10804198  T
Q  152 ttgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccga 251  Q
    ||||||||||| |||||||||||||||||||||| || | ||| |||||||||||| |||| |||||||||||||||||| ||||||||||||||||||     
T  10804199 ttgaaccaaattgaataaaagaaataagttaaggaacttatttaagaaagttaaaacttataggaccaaattgaataaaagaaataagttaagggaccgg 10804298  T
Q  252 cagatcaattaagcc 266  Q
    |||||||||||||||    
T  10804299 cagatcaattaagcc 10804313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 50 - 265
Target Start/End: Original strand, 23757872 - 23758088
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaa 149  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||| |||||||||| |||||| ||||||||||||||||||    
T  23757872 aagaagaaagtaaataaattaggtgttggtgatacaccataaaatctgatagacctccgtaattcaacggtctctttttttggaggattaaaattatcaa 23757971  T
Q  150 aatt-gaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggac 248  Q
    |||| || | ||||  ||||||||||||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||||| |||||| |||| | ||    
T  23757972 aattggatcaaaatttaataaaagaaataagttaagggacgtgtttgagaaagttaaaacttatgagactaaattgaataaaagaaataaattaaagaac 23758071  T
Q  249 cgacagatcaattaagc 265  Q
    || ||||||||||||||    
T  23758072 cggcagatcaattaagc 23758088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 60 - 271
Target Start/End: Complemental strand, 8814340 - 8814130
Alignment:
Q  60 taaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaaaattgaacca 159  Q
    ||||||||||||||||||||| ||||||||||||| | |||||||||||||||||||| |||| ||||||||| | ||||||||||||||||||  ||||    
T  8814340 taaataaattaggtgttggtgttacactataaaatctgatagacctccgtaatccaacagtct-attttttagggtattaaaattatcaaaattcgacca 8814242  T
Q  160 aatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatcaa 259  Q
    ||| ||||||||||||||||||||||||| |||||||||||| ||| | ||||||||| ||||||||||||| ||||||||||||||||||| |||||||    
T  8814241 aattgaataaaagaaataagttaagggacatgtttgagaaagataagatttatgggactaaattgaataaaagaaataagttaagggaccgatagatcaa 8814142  T
Q  260 ttaagccaaaaa 271  Q
    ||||||| ||||    
T  8814141 ttaagccgaaaa 8814130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 31 - 266
Target Start/End: Complemental strand, 18091815 - 18091580
Alignment:
Q  31 atgaagatgaggaaagggaaagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcatttttt 130  Q
    |||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||| |||||||||||||||||    
T  18091815 atgaagatgagggaagaagaagaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagacctctgtaattcaacggtctcatttttt 18091716  T
Q  131 agaggattaaaattatcaaaattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaa 230  Q
    |   |||||||||||||||||||| || |||| |||||||| | ||||||||| |||||| |||||||||||||| | |||||  |||||||| ||||||    
T  18091715 aagagattaaaattatcaaaattggactaaattgaataaaatagataagttaatggacgtttttgagaaagttaagacttatgaaaccaaattaaataaa 18091616  T
Q  231 ataaataagttaagggaccgacagatcaattaagcc 266  Q
    | ||||||||||||||| || |||||||||||||||    
T  18091615 agaaataagttaagggatcggcagatcaattaagcc 18091580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 16 - 267
Target Start/End: Complemental strand, 56233958 - 56233723
Alignment:
Q  16 attgttgaaggttgcatgaagatgaggaaagggaaagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatcca 115  Q
    ||||||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||||||| |||||                   
T  56233958 attgttgaatgttgcatgaagatgaggaaagaggaagaagaaagtaaataaattaggtgttggcgatacactataaaatcttata--------------- 56233874  T
Q  116 acggtctcattttttagaggattaaaattatcaaaattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatggg 215  Q
     ||||||| |||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||| | | ||||| |    
T  56233873 -cggtctctttttttaggggattaaaattatcaaaattggaccaaattgaataaaagaaataagttaagggacatgtttgagaaagttgagacttatgcg 56233775  T
Q  216 accaaattgaataaaataaataagttaagggaccgacagatcaattaagcca 267  Q
    |||||||||||||||| ||||||||||||||||||| ||||| |||||||||    
T  56233774 accaaattgaataaaagaaataagttaagggaccgatagatctattaagcca 56233723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 31 - 231
Target Start/End: Original strand, 22623029 - 22623226
Alignment:
Q  31 atgaagatgaggaaagggaaagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcatttttt 130  Q
    |||||||||||| |||   ||||||| |||||||||||||| ||||||||||||| |||||||| | |||||||||||||||||||||||||| |||| |    
T  22623029 atgaagatgagggaag---aagaagagagtaaataaattagatgttggtgatacattataaaatctgatagacctccgtaatccaacggtctctttttgt 22623125  T
Q  131 agaggattaaaattatcaaaattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaa 230  Q
    || ||||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||| ||||||||||||| | ||||||||||||||||||||||    
T  22623126 aggggattaaaattatcaaaattggaccaaattgaataaaagaaataagtaaagggacgtgcttgagaaagttaagacttatgggaccaaattgaataaa 22623225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 50 - 262
Target Start/End: Original strand, 48501226 - 48501437
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaa 149  Q
    |||||||||||||||||||||||||||| |||||||| ||||||| | | |||||||||||||| ||||||||| |||||||| |||||||||| || ||    
T  48501226 aagaagaaagtaaataaattaggtgttgatgatacacaataaaatctgacagacctccgtaatctaacggtctctttttttaggggattaaaat-attaa 48501324  T
Q  150 aattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggacc 249  Q
    ||||  ||||||| |||||||||||||||||||| |||| |||||||||||||||| |||||||  ||| |||||||||||| ||||||||||| | |||    
T  48501325 aattagaccaaattgaataaaagaaataagttaaaggacatgtttgagaaagttaagaattatgaaacctaattgaataaaagaaataagttaaagaacc 48501424  T
Q  250 gacagatcaatta 262  Q
    |||||||||||||    
T  48501425 gacagatcaatta 48501437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 61 - 266
Target Start/End: Complemental strand, 35192019 - 35191817
Alignment:
Q  61 aaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaaaattgaaccaa 160  Q
    |||||||||||||| ||||   |||||||||||||| |||||| |||||||||||||| |||| |||||||| |||||||||||||||||||||||| ||    
T  35192019 aaataaattaggtggtggt---acactataaaatttgatagacttccgtaatccaacgttctctttttttaggggattaaaattatcaaaattgaactaa 35191923  T
Q  161 atggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatcaat 260  Q
    || |||||||||||||||||||| | ||||||||||||||||||| | |||||  |||||||||||||||| |||||||||||||||||| |  ||||||    
T  35191922 attgaataaaagaaataagttaatgaacgtgtttgagaaagttaagacttatgaaaccaaattgaataaaagaaataagttaagggaccggcgaatcaat 35191823  T
Q  261 taagcc 266  Q
    ||||||    
T  35191822 taagcc 35191817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 56 - 263
Target Start/End: Complemental strand, 48499573 - 48499367
Alignment:
Q  56 aaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaaaattga 155  Q
    |||||||| ||||||| ||||||||||||||  |||||| | ||||||||| ||||||||||| |||| |||||||| |||||||||||||||||||||     
T  48499573 aaagtaaa-aaattagatgttggtgatacaccgtaaaatctgatagacctctgtaatccaacgatctctttttttaggggattaaaattatcaaaattgg 48499475  T
Q  156 accaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacaga 255  Q
    ||||||| |||||||| |||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||| |||||||||||||   || ||||    
T  48499474 accaaattgaataaaataaataagttaagggacatgtttgaaaaagttaagaattatgggaccaaattgaataaaagaaataagttaaggtggcggcaga 48499375  T
Q  256 tcaattaa 263  Q
    ||||||||    
T  48499374 tcaattaa 48499367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 63 - 276
Target Start/End: Original strand, 17357778 - 17357991
Alignment:
Q  63 ataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaaaattgaaccaaat 162  Q
    |||||||| || ||| ||||||| |||||||| |  |||||||||||||| |||||||||| ||||| ||  |||||||||||||||||||| | || ||    
T  17357778 ataaattaagtattgctgatacattataaaatctggtagacctccgtaattcaacggtctcttttttcaggagattaaaattatcaaaattggatcatat 17357877  T
Q  163 ggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatcaatta 262  Q
     |||||||||||||||||||||||||||||||||||||||||| | |||||| |||||||||||||||| |||||||||||||||||| |||||||||||    
T  17357878 tgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatggaaccaaattgaataaaagaaataagttaagggaccggcagatcaatta 17357977  T
Q  263 agccaaaaataaat 276  Q
    | ||  ||||||||    
T  17357978 aaccttaaataaat 17357991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 50 - 266
Target Start/End: Original strand, 56234923 - 56235138
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaa 149  Q
    |||||||||||||||||||||||||||||||||||| |||||||| | |||||||| |||||| ||  |||||  |||||||||||||||||| ||||||    
T  56234923 aagaagaaagtaaataaattaggtgttggtgatacattataaaatctgatagaccttcgtaattcattggtctg-ttttttagaggattaaaagtatcaa 56235021  T
Q  150 aattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggacc 249  Q
    ||||  ||| ||| |||||||||||||||||||||||  |||||||| |||||||| | ||||| || |||||||||||||| |||||| |||||||||     
T  56235022 aattagaccgaattgaataaaagaaataagttaaggggtgtgtttgataaagttaagacttatgagatcaaattgaataaaagaaataaattaagggact 56235121  T
Q  250 gacagatcaattaagcc 266  Q
    |||||||||||||||||    
T  56235122 gacagatcaattaagcc 56235138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 31 - 243
Target Start/End: Original strand, 5433293 - 5433502
Alignment:
Q  31 atgaagatgaggaaagggaaagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcatttttt 130  Q
    |||||||||||| |||   ||||||||| ||||||||||||||||| |||||||| |||||||| | ||||||||||||||| |||| |||||| |||||    
T  5433293 atgaagatgagggaag---aagaagaaattaaataaattaggtgtttgtgatacattataaaatctgatagacctccgtaatacaacagtctcaattttt 5433389  T
Q  131 agaggattaaaattatcaaaattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaa 230  Q
    || | ||||||||||||||||||| |  |||| |||||||| ||||||||||||| || |||||||||||||||||| |||| |||||||||||||||||    
T  5433390 agggtattaaaattatcaaaattggagtaaattgaataaaataaataagttaaggcacatgtttgagaaagttaaaacttataggaccaaattgaataaa 5433489  T
Q  231 ataaataagttaa 243  Q
    | |||||||||||    
T  5433490 agaaataagttaa 5433502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 98 - 264
Target Start/End: Original strand, 35193146 - 35193312
Alignment:
Q  98 atagacctccgtaatccaacggtctcattttttagaggattaaaattatcaaaattgaaccaaatggaataaaagaaataagttaagggacgtgtttgag 197  Q
    |||||||||||||||||||||||||| |||| ||| |||||||||||||||||| || ||||||| |||||||||||||||||||| |||||||||||||    
T  35193146 atagacctccgtaatccaacggtctctttttctaggggattaaaattatcaaaaatggaccaaattgaataaaagaaataagttaaaggacgtgtttgag 35193245  T
Q  198 aaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatcaattaag 264  Q
    ||||||||   ||||| ||||||||||||||||| |||||| ||||||||| | ||| |||||||||    
T  35193246 aaagttaagttttatgagaccaaattgaataaaagaaataaattaagggactggcaggtcaattaag 35193312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 31 - 246
Target Start/End: Original strand, 36074677 - 36074892
Alignment:
Q  31 atgaagatgaggaaagggaaagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcatttttt 130  Q
    |||||||||||| |||   |||| |||| ||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||| |||  ||||||    
T  36074677 atgaagatgagggaagaagaagaggaaattaaataaattaggtgttggtgatacactataaaatatgatagaccttcgtaatccaacgatct--tttttt 36074774  T
Q  131 agaggattaaaattat-caaaattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaa-agttaaaaattatgggaccaaattgaata 228  Q
    |   |||||||| |||  ||||||  ||||||| |||||||| ||||||||||||| ||||| ||||||| |||||||| ||||||||| ||||||||||    
T  36074775 atgagattaaaaatataaaaaattagaccaaattgaataaaaaaaataagttaaggaacgtgcttgagaagagttaaaatttatgggactaaattgaata 36074874  T
Q  229 aaataaataagttaaggg 246  Q
    ||||||||||| ||||||    
T  36074875 aaataaataagataaggg 36074892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 173 - 266
Target Start/End: Original strand, 34122827 - 34122920
Alignment:
Q  173 aaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatcaattaagcc 266  Q
    |||| |||||||||| ||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  34122827 aaatgagttaagggatgtgtttgagaaagttaagatttatgggaccaaattgaataaaagaaataagttaagggaccgacagatcaattaagcc 34122920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 21 - 153
Target Start/End: Complemental strand, 35925936 - 35925804
Alignment:
Q  21 tgaaggttgcatgaagatgaggaaagggaaagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggt 120  Q
    |||||| || ||||||||||||  ||   ||||||||||||||||||||||||||||  ||||||||||||||| | ||||| |||||||||||||| ||    
T  35925936 tgaaggatgaatgaagatgaggggagaagaagaagaaagtaaataaattaggtgttgacgatacactataaaatctgatagatctccgtaatccaacagt 35925837  T
Q  121 ctcattttttagaggattaaaattatcaaaatt 153  Q
    ||  ||||||||| |||||||||||||||||||    
T  35925836 ctttttttttagaagattaaaattatcaaaatt 35925804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 50 - 154
Target Start/End: Original strand, 35927018 - 35927122
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaa 149  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |  ||||||| |||||||||||| |||  ||||||||  |||||||||||||||    
T  35927018 aagaagaaagtaaataaattaggtgttggtgatacactataaaatctggtagaccttcgtaatccaacgatctttttttttaggagattaaaattatcaa 35927117  T
Q  150 aattg 154  Q
    |||||    
T  35927118 aattg 35927122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 156 - 263
Target Start/End: Original strand, 48081598 - 48081705
Alignment:
Q  156 accaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacaga 255  Q
    ||||||| ||||||||||||||||||||||||| | ||||| |||||||| | |||||| ||||||||||||||||  |||||||||||||||||||| |    
T  48081598 accaaattgaataaaagaaataagttaagggacatatttgaaaaagttaagacttatggaaccaaattgaataaaaggaataagttaagggaccgacaca 48081697  T
Q  256 tcaattaa 263  Q
    ||||||||    
T  48081698 tcaattaa 48081705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 48463014 - 48463102
Alignment:
Q  178 agttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatcaattaagcc 266  Q
    |||||||||| ||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||  |||||||||||||||    
T  48463014 agttaagggatgtgtttgagaaagttaaaacttatgagaccaaattgaataaaagaaataagttaagggaccagcagatcaattaagcc 48463102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 164 - 266
Target Start/End: Complemental strand, 48080372 - 48080270
Alignment:
Q  164 gaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatcaattaa 263  Q
    |||||||||||||||||||| ||||  ||||||||||||||| | |||||  |||||||| ||||||| |||||||||||| ||||||||||||||||||    
T  48080372 gaataaaagaaataagttaaaggacaagtttgagaaagttaagacttatgaaaccaaattaaataaaagaaataagttaagtgaccgacagatcaattaa 48080273  T
Q  264 gcc 266  Q
    |||    
T  48080272 gcc 48080270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 170 - 248
Target Start/End: Original strand, 48081552 - 48081630
Alignment:
Q  170 aagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggac 248  Q
    ||||||||| |||||||||||||||||||||||||| | ||||| ||||||||||||||||| ||||||||||||||||    
T  48081552 aagaaataacttaagggacgtgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaagggac 48081630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 34121387 - 34121299
Alignment:
Q  178 agttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatcaattaagcc 266  Q
    ||||||| || ||||||||||||||||| | ||||| ||||||||||||||||| |||||| ||||||||||| |||||||||||||||    
T  34121387 agttaagtgatgtgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataaattaagggaccggcagatcaattaagcc 34121299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 49 - 129
Target Start/End: Original strand, 48081281 - 48081361
Alignment:
Q  49 aaagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttt 129  Q
    ||||||||||||||||||||||||||||||||||||| |||||| | | |||||  || | |||||||||||||| |||||    
T  48081281 aaagaagaaagtaaataaattaggtgttggtgatacagtataaactctcatagatatctggaatccaacggtctctttttt 48081361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 50 - 117
Target Start/End: Original strand, 48081469 - 48081536
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaac 117  Q
    |||||||||||||||||||||||||||||||||||| |||||| | | | ||||||||| ||||||||    
T  48081469 aagaagaaagtaaataaattaggtgttggtgatacattataaactctgaaagacctccgcaatccaac 48081536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 52 - 123
Target Start/End: Original strand, 34122725 - 34122796
Alignment:
Q  52 gaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctc 123  Q
    ||||||||||||||||| | |||||||||||||||||||| || | ||||| |||| | |||||||| ||||    
T  34122725 gaagaaagtaaataaatcaagtgttggtgatacactataagatctgatagatctcccttatccaacgttctc 34122796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 213 - 264
Target Start/End: Original strand, 48081392 - 48081443
Alignment:
Q  213 gggaccaaattgaataaaataaataagttaagggaccgacagatcaattaag 264  Q
    |||||||||||||||||||  ||||||||||||||||| || ||||||||||    
T  48081392 gggaccaaattgaataaaaggaataagttaagggaccggcaaatcaattaag 48081443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 52 - 136
Target Start/End: Original strand, 48462907 - 48462991
Alignment:
Q  52 gaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagagga 136  Q
    ||||||||||||||||| | |||||| ||||||| ||||| || | ||||| |||| |||||||||| ||||  |||| ||||||    
T  48462907 gaagaaagtaaataaatcatgtgttgatgatacagtataagatctgatagatctccctaatccaacgatctctattttgagagga 48462991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 132
Target Start/End: Original strand, 17522475 - 17522546
Alignment:
Q  61 aaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttag 132  Q
    ||||||||||||||| ||||||||||| | | || |||||||||||| |  |||||||||||| | ||||||    
T  17522475 aaataaattaggtgtcggtgatacactcttagatcttatagacctcctttttccaacggtctcctgttttag 17522546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 266
Target Start/End: Original strand, 22624389 - 22624428
Alignment:
Q  227 taaaataaataagttaagggaccgacagatcaattaagcc 266  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  22624389 taaaagaaataagttaagggaccggcagatcaattaagcc 22624428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 145
Target Start/End: Original strand, 21570330 - 21570423
Alignment:
Q  52 gaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaatta 145  Q
    |||||||||||   ||||||| | ||||||||||| || | || | |||||||||| | ||||||||||||  ||||| ||||| |||||||||    
T  21570330 gaagaaagtaatataattaggcgctggtgatacacgattagatctgatagacctcctttatccaacggtcttctttttgagaggtttaaaatta 21570423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 210 - 270
Target Start/End: Complemental strand, 5574256 - 5574196
Alignment:
Q  210 tatgggaccaaattgaataaaataaataagttaagggaccgacagatcaattaagccaaaa 270  Q
    ||||| ||||| || ||||||| || |||||||||||||||   |||||||||||||||||    
T  5574256 tatggtaccaatttaaataaaagaattaagttaagggaccggaggatcaattaagccaaaa 5574196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 156 - 188
Target Start/End: Original strand, 34122870 - 34122902
Alignment:
Q  156 accaaatggaataaaagaaataagttaagggac 188  Q
    ||||||| |||||||||||||||||||||||||    
T  34122870 accaaattgaataaaagaaataagttaagggac 34122902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 156 - 188
Target Start/End: Original strand, 48463052 - 48463084
Alignment:
Q  156 accaaatggaataaaagaaataagttaagggac 188  Q
    ||||||| |||||||||||||||||||||||||    
T  48463052 accaaattgaataaaagaaataagttaagggac 48463084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 162; Significance: 3e-86; HSPs: 66)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 50 - 271
Target Start/End: Original strand, 28777589 - 28777810
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaa 149  Q
    |||||||||||||||||||||||||||| |||||||||||||||| | |||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  28777589 aagaagaaagtaaataaattaggtgttgatgatacactataaaatctgatagacctccgtaatccaacggtctctttttttaggggattaaaattatcaa 28777688  T
Q  150 aattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggacc 249  Q
    ||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||| | |||| |||||||||||||||||| |||||| ||||||||||    
T  28777689 aattggaccaaattgaataaaagaaatcagttaagggacgtgtttgagaaagttaagacttataggaccaaattgaataaaagaaataaattaagggacc 28777788  T
Q  250 gacagatcaattaagccaaaaa 271  Q
    | ||||||||||||||| ||||    
T  28777789 ggcagatcaattaagcctaaaa 28777810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 50 - 266
Target Start/End: Complemental strand, 31937251 - 31937035
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaa 149  Q
    |||||||||||||| |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  31937251 aagaagaaagtaaaaaaattaggtgttggtgatacactataaaatctgatagacctccgtaatccaacggtctctttttttaggggattaaaattatcaa 31937152  T
Q  150 aattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggacc 249  Q
    ||||| ||||||  |||||||| |||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||||    
T  31937151 aattggaccaaaatgaataaaataaataagtgaagggacgtgtttgagaaagttaagacttatgggaccaaattgaataaaagaaataagttaagggacc 31937052  T
Q  250 gacagatcaattaagcc 266  Q
    | |||||||||||||||    
T  31937051 ggcagatcaattaagcc 31937035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 158; E-Value: 8e-84
Query Start/End: Original strand, 50 - 271
Target Start/End: Original strand, 46903526 - 46903747
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaa 149  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||  |||||||| |||||||||| |||||    
T  46903526 aagaagaaagtaaataaattaggtgttggtgatacactataaaatctaatagacctccgtaatccaacggtctttttttttaggggattaaaatcatcaa 46903625  T
Q  150 aattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggacc 249  Q
    ||||| ||||||| |||||||||||||||||||| |||||||||||| ||| |||| | ||||||||||||||||||||||| ||||||||||||||||     
T  46903626 aattgtaccaaattgaataaaagaaataagttaaaggacgtgtttgaaaaacttaagatttatgggaccaaattgaataaaagaaataagttaagggact 46903725  T
Q  250 gacagatcaattaagccaaaaa 271  Q
    || |||||||||||||||||||    
T  46903726 gaaagatcaattaagccaaaaa 46903747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 20 - 268
Target Start/End: Original strand, 2233177 - 2233425
Alignment:
Q  20 ttgaaggttgcatgaagatgaggaaagggaaagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacgg 119  Q
    ||||||| || |||||||||| | |||   ||||||||||||| ||||||||||||||||||||| ||||||||| ||||||| |||| ||||||||||     
T  2233177 ttgaaggatgaatgaagatgatggaagaagaagaagaaagtaattaaattaggtgttggtgatacgctataaaatcttatagatctccataatccaacga 2233276  T
Q  120 tctcattttttagaggattaaaattatcaaaattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggacca 219  Q
    |||| |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||| |||||||| | ||||| ||||     
T  2233277 tctctttttttagaggattaaaattatcaaaattggaccaaattgaataaaagaaataagttaagggacatgtttgacaaagttaagacttatgagaccg 2233376  T
Q  220 aattgaataaaataaataagttaagggaccgacagatcaattaagccaa 268  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  2233377 aattgaataaaagaaataagttaagggaccgacagatcaattaagccaa 2233425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 50 - 263
Target Start/End: Complemental strand, 46902547 - 46902334
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaa 149  Q
    |||||||||||||||||||| |||||| ||||||||||||||||| | |||||||||||||||| |||  |||| | |||||| ||||||||||||||||    
T  46902547 aagaagaaagtaaataaatttggtgttagtgatacactataaaatctgatagacctccgtaatctaacaatctcttcttttaggggattaaaattatcaa 46902448  T
Q  150 aattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggacc 249  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||||    
T  46902447 aattgcaccaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagatttatgggaccaaattgaataaaagaaataagttaagggacc 46902348  T
Q  250 gacagatcaattaa 263  Q
    ||||||||||||||    
T  46902347 gacagatcaattaa 46902334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 50 - 266
Target Start/End: Complemental strand, 17116417 - 17116202
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaa 149  Q
    ||||||||||| ||||||||||||||||||||||||||||||| | | || |||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  17116417 aagaagaaagtgaataaattaggtgttggtgatacactataaactctgatggacctccgtaatccaacggtgtcattttttag-ggattaaaattatcaa 17116319  T
Q  150 aattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggacc 249  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| | ||||| ||||||||||||||||| ||||||||||||||| |    
T  17116318 aattgaaccaaattgaataaaagaaataagttaagggacgtgtttgagaaacttaacacttatgagaccaaattgaataaaagaaataagttaagggatc 17116219  T
Q  250 gacagatcaattaagcc 266  Q
    | |||||||||||||||    
T  17116218 ggcagatcaattaagcc 17116202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 56 - 268
Target Start/End: Original strand, 31938216 - 31938427
Alignment:
Q  56 aaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaaaattga 155  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||| ||||||||||||| |||||||     
T  31938216 aaagtaaa-aaattaggtgttggtgatacactataaaatcttatagaccttcgtaatccaacggtctctttttttaggggattaaaattattaaaattgg 31938314  T
Q  156 accaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacaga 255  Q
    || |||| |||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||||| |||||||||||||||||| ||||    
T  31938315 actaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaagggaccggcaga 31938414  T
Q  256 tcaattaagccaa 268  Q
    |||||||||||||    
T  31938415 tcaattaagccaa 31938427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 50 - 266
Target Start/End: Original strand, 23073276 - 23073492
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaa 149  Q
    |||||||||||||||||||||||||||||||||||||  |||||||| ||| ||||||||||| |||||||||| |||||||| ||||||||||||||||    
T  23073276 aagaagaaagtaaataaattaggtgttggtgatacaccgtaaaatttgatacacctccgtaattcaacggtctctttttttaggggattaaaattatcaa 23073375  T
Q  150 aattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggacc 249  Q
    ||||||||||  | ||||||||||||||||||||||||| | |||||||||||||| | ||||||||||||||||||||||| ||||||||||| |||||    
T  23073376 aattgaaccagtttgaataaaagaaataagttaagggacatctttgagaaagttaagatttatgggaccaaattgaataaaagaaataagttaaaggacc 23073475  T
Q  250 gacagatcaattaagcc 266  Q
    | |||||||||||||||    
T  23073476 ggcagatcaattaagcc 23073492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 50 - 264
Target Start/End: Original strand, 43393955 - 43394170
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaa 149  Q
    |||||||||||||||||||||||||||||||||||||| |||||| | |||||||||||||||||||||||||| |||||||| || |||||||||||||    
T  43393955 aagaagaaagtaaataaattaggtgttggtgatacactgtaaaatctgatagacctccgtaatccaacggtctctttttttagggggttaaaattatcaa 43394054  T
Q  150 aattgaaccaaatggaataaaag-aaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggac 248  Q
    ||||| ||||| | ||||||||| |||||||||||||||||| |||||||||||||| | ||||| ||||||||||||||||| ||||||||||||||||    
T  43394055 aattggaccaatttgaataaaagaaaataagttaagggacgtctttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaagggac 43394154  T
Q  249 cgacagatcaattaag 264  Q
    || |||||||||||||    
T  43394155 cggcagatcaattaag 43394170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 52 - 253
Target Start/End: Original strand, 21729092 - 21729293
Alignment:
Q  52 gaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaaaa 151  Q
    |||||||||||||||||||||||||| |||||||||||||||| |  ||||||| | |||||||| ||||||||||||||||||||||||||||||||||    
T  21729092 gaagaaagtaaataaattaggtgttgatgatacactataaaatatggtagaccttcataatccaatggtctcattttttagaggattaaaattatcaaaa 21729191  T
Q  152 ttgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccga 251  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||| |||||| ||||||||||||    
T  21729192 ttgaatcaaattgaataaaagaaataagttaagggacgtgtttgagaaagttagaacttatgggactaaattgaataaaagaaataaattaagggaccga 21729291  T
Q  252 ca 253  Q
    ||    
T  21729292 ca 21729293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 50 - 263
Target Start/End: Original strand, 47431089 - 47431302
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaa 149  Q
    |||||||||||||||||||||||||| |||||||||||||||||| | |||||||||| ||||||||||||||| |||||||| ||||||||||||||||    
T  47431089 aagaagaaagtaaataaattaggtgtgggtgatacactataaaatctaatagacctccataatccaacggtctctttttttaggggattaaaattatcaa 47431188  T
Q  150 aattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggacc 249  Q
    ||||| ||||||| ||| |||||||||||||||||| |||||||||| |||||||||| ||||| ||||||||||||||||| |||||| |||||||||     
T  47431189 aattggaccaaattgaacaaaagaaataagttaaggaacgtgtttgaaaaagttaaaacttatgagaccaaattgaataaaagaaataaattaagggact 47431288  T
Q  250 gacagatcaattaa 263  Q
    |||| |||||||||    
T  47431289 gacaaatcaattaa 47431302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 31 - 265
Target Start/End: Original strand, 35759114 - 35759348
Alignment:
Q  31 atgaagatgaggaaagggaaagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcatttttt 130  Q
    |||||||||||| |||   |||||||||||||||||||||||||||||||||||||| |||||| | |||||| | ||||||||||||||||  ||||||    
T  35759114 atgaagatgagggaagaagaagaagaaagtaaataaattaggtgttggtgatacactgtaaaatctgatagacattcgtaatccaacggtctgttttttt 35759213  T
Q  131 agaggattaaaattatcaaaattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaa 230  Q
        |||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||||||| | ||||||||| ||||||||||||    
T  35759214 tttagattaaaattatcaaaattggaccaaattgaataaaagaaataaattaagggacgtgtttgagaaagttaagacttatgggactaaattgaataaa 35759313  T
Q  231 ataaataagttaagggaccgacagatcaattaagc 265  Q
    | |||||||||||||||||| ||||||||||||||    
T  35759314 agaaataagttaagggaccggcagatcaattaagc 35759348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 50 - 263
Target Start/End: Complemental strand, 55209997 - 55209785
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaa 149  Q
    ||||| |||||||||||||||||||||||| |||||||||||| | | ||||||||||||||||||| |||||| |||||| | ||||||||||||||||    
T  55209997 aagaataaagtaaataaattaggtgttggtaatacactataaattctgatagacctccgtaatccaatggtctc-ttttttcgtggattaaaattatcaa 55209899  T
Q  150 aattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggacc 249  Q
    ||||| |||||||  |||||||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||||||||    
T  55209898 aattggaccaaattaaataaaagaaataaattaagggacgtgtttgagaaagttaaaacttatggaaccaaattgaataaaagaaataagttaagggacc 55209799  T
Q  250 gacagatcaattaa 263  Q
    |  |||||||||||    
T  55209798 ggtagatcaattaa 55209785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 50 - 265
Target Start/End: Complemental strand, 37609537 - 37609322
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaa 149  Q
    |||||||||||||||||||||||||||| ||| ||||||| |||| |||||||||||| ||||||||||||||| |||||||| ||||||||||||| ||    
T  37609537 aagaagaaagtaaataaattaggtgttgatgagacactattaaatcttatagacctccctaatccaacggtctctttttttaggggattaaaattattaa 37609438  T
Q  150 aattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggacc 249  Q
    ||||| | ||||| |||||||||||||||||| ||||||||||||||||||||||| | ||||  ||||||||| ||||||| ||||||||||| |||||    
T  37609437 aattggatcaaattgaataaaagaaataagttgagggacgtgtttgagaaagttaagacttatatgaccaaattaaataaaagaaataagttaaaggacc 37609338  T
Q  250 gacagatcaattaagc 265  Q
    | ||||||||||||||    
T  37609337 ggcagatcaattaagc 37609322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 49 - 266
Target Start/End: Complemental strand, 21728127 - 21727910
Alignment:
Q  49 aaagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatca 148  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||   |||||||| ||||||| ||| ||||  ||||||||  ||||||||||||||    
T  21728127 aaagaagaaggtaaataaattaggtgttggtgatacattataaaatgagatagaccttcgtaatctaacagtctacttttttaggagattaaaattatca 21728028  T
Q  149 aaattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggac 248  Q
    |||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||| | ||||| ||||||||||||||||| |||||||||| |||||    
T  21728027 aaattgaatcaaattgaataaaagaaataagttaagggacatgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttatgggac 21727928  T
Q  249 cgacagatcaattaagcc 266  Q
    || |||||||||||||||    
T  21727927 cggcagatcaattaagcc 21727910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 50 - 266
Target Start/End: Complemental strand, 28776664 - 28776448
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaa 149  Q
    |||||||||||||||||||||||||||| ||||||| |||||||| | ||||||||||||||||||||||||||  ||||||| ||||||||||||||||    
T  28776664 aagaagaaagtaaataaattaggtgttgatgatacattataaaatctgatagacctccgtaatccaacggtctctgtttttaggggattaaaattatcaa 28776565  T
Q  150 aattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggacc 249  Q
    ||||| ||||||| ||||||||||||| ||||||||||| ||||||||||| |||| | |||| ||| |||||||||||||| |||||| |||| ||||     
T  28776564 aattggaccaaattgaataaaagaaatcagttaagggacttgtttgagaaaattaagatttataggatcaaattgaataaaaaaaataaattaaaggact 28776465  T
Q  250 gacagatcaattaagcc 266  Q
    || ||||||||||||||    
T  28776464 gatagatcaattaagcc 28776448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 31 - 263
Target Start/End: Complemental strand, 52522161 - 52521930
Alignment:
Q  31 atgaagatgaggaaagggaaagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcatttttt 130  Q
    |||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||  ||||||    
T  52522161 atgaagatgagggaagaagaagaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagacctccgtaatccaactgtctt-tttttt 52522063  T
Q  131 agaggattaaaattatcaaaattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaa 230  Q
    || |||||||| |||||||||||| ||||||| |||||||| |||||||| || ||||||||||||||||||||| |  |||| ||||||||||||| ||    
T  52522062 aggggattaaagttatcaaaattggaccaaattgaataaaataaataagtgaaaggacgtgtttgagaaagttaagatctatgagaccaaattgaattaa 52521963  T
Q  231 ataaataagttaagggaccgacagatcaattaa 263  Q
    | |||||||||||||||||  ||||||||||||    
T  52521962 agaaataagttaagggaccagcagatcaattaa 52521930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 50 - 266
Target Start/End: Complemental strand, 5689935 - 5689725
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaa 149  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||| | ||||| |||||||||||||||||    
T  5689935 aagaagaaagtaaataaattaagtgttggtgatacactataaaatctgatagacctccgtaatccaacggtctcttgttttaaaggattaaaattatcaa 5689836  T
Q  150 aattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggacc 249  Q
    ||||| |||||||  ||||||||||||||||||||||||||||||| |      |||  ||||||||||||||| ||||||| ||||||| ||||||| |    
T  5689835 aattggaccaaatttaataaaagaaataagttaagggacgtgtttggg------aaatcttatgggaccaaatttaataaaagaaataagctaagggagc 5689742  T
Q  250 gacagatcaattaagcc 266  Q
    |||||||||||||||||    
T  5689741 gacagatcaattaagcc 5689725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 53 - 266
Target Start/End: Original strand, 10979080 - 10979293
Alignment:
Q  53 aagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaaaat 152  Q
    ||||||||||||||||||| ||||||||||||||  |||||||| ||| ||||||||||||||| |||||| ||||| |  ||| |||||||||||||||    
T  10979080 aagaaagtaaataaattagatgttggtgatacaccgtaaaatttgataaacctccgtaatccaatggtctcttttttaaagggactaaaattatcaaaat 10979179  T
Q  153 tgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgac 252  Q
    |||| ||||| ||||||||||||||||| ||  ||||||||||||||| |||| | ||||||||||||||||||||||| |||||||||||||||||| |    
T  10979180 tgaatcaaattgaataaaagaaataagtgaaatgacgtgtttgagaaatttaagatttatgggaccaaattgaataaaagaaataagttaagggaccggc 10979279  T
Q  253 agatcaattaagcc 266  Q
    ||||||||||||||    
T  10979280 agatcaattaagcc 10979293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 49 - 270
Target Start/End: Original strand, 52525261 - 52525481
Alignment:
Q  49 aaagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatca 148  Q
    ||||||||||||||| ||||||| ||||||||| ||| |||||||| ||||  |||| | ||||||||||||||| |||||||| ||||||||||||| |    
T  52525261 aaagaagaaagtaaa-aaattagatgttggtgacacattataaaatcttattaaccttcataatccaacggtctctttttttaggggattaaaattatta 52525359  T
Q  149 aaattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggac 248  Q
    |||||| || |||| |||||||||||||||||||||||| ||||||||||||||||| | ||||| ||||||||||||||||| ||||||||||||||||    
T  52525360 aaattggactaaattgaataaaagaaataagttaagggatgtgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaagggac 52525459  T
Q  249 cgacagatcaattaagccaaaa 270  Q
    ||||| |||||||||| |||||    
T  52525460 cgacaaatcaattaagtcaaaa 52525481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 62 - 265
Target Start/End: Original strand, 53180718 - 53180920
Alignment:
Q  62 aataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaaaattgaaccaaa 161  Q
    ||||||||||||||||||||||||||||| ||| | |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| || |||    
T  53180718 aataaattaggtgttggtgatacactatacaatctgatagacctccgtaatccaacggtctccttttttagaggattaaaattattaaaattggactaaa 53180817  T
Q  162 tggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatcaatt 261  Q
    | |||||||| ||||||||||| | ||||||||||||||||||  | ||||| || |||||||||||||| |||||||||||||||||| || |||||||    
T  53180818 ttgaataaaaaaaataagttaaagaacgtgtttgagaaagttacgacttatgagatcaaattgaataaaa-aaataagttaagggaccggcaaatcaatt 53180916  T
Q  262 aagc 265  Q
    ||||    
T  53180917 aagc 53180920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 67 - 272
Target Start/End: Original strand, 17742211 - 17742417
Alignment:
Q  67 attaggtgttggtgatacactata-aaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaaaattgaaccaaatgga 165  Q
    ||||||||||| ||||||||| || |||| | |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| | |||||  |    
T  17742211 attaggtgttgttgatacactgtataaatctgatagacctccgtaatccaacggtctctttttttaggggattaaaattatcaaaattggatcaaattta 17742310  T
Q  166 ataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatcaattaagc 265  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||||| ||||||||||||||| || |||||  |||||||    
T  17742311 ataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaagggatcggcagatgtattaagc 17742410  T
Q  266 caaaaat 272  Q
    | |||||    
T  17742411 ctaaaat 17742417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 67 - 272
Target Start/End: Original strand, 19043531 - 19043737
Alignment:
Q  67 attaggtgttggtgatacactata-aaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaaaattgaaccaaatgga 165  Q
    ||||||||||| ||||||||| || |||| | |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| | |||||  |    
T  19043531 attaggtgttgttgatacactgtataaatctgatagacctccgtaatccaacggtctctttttttaggggattaaaattatcaaaattggatcaaattta 19043630  T
Q  166 ataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatcaattaagc 265  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||||| ||||||||||||||| || |||||  |||||||    
T  19043631 ataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaagggatcggcagatgtattaagc 19043730  T
Q  266 caaaaat 272  Q
    | |||||    
T  19043731 ctaaaat 19043737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 53 - 266
Target Start/End: Complemental strand, 2232815 - 2232602
Alignment:
Q  53 aagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaaaat 152  Q
    ||||||||||||||||||||||||| ||||||||  |||||| | ||||||||||||||||||| |||||  |||| ||| ||||||||||||| |||||    
T  2232815 aagaaagtaaataaattaggtgttgctgatacaccgtaaaatctcatagacctccgtaatccaatggtctttttttctaggggattaaaattattaaaat 2232716  T
Q  153 tgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgac 252  Q
    || |  |||| ||||||||||||||| ||||||||||| |||||||||||||| | ||||| ||||||||||||||||| ||||||||||||||| || |    
T  2232715 tggattaaattgaataaaagaaataaattaagggacgtatttgagaaagttaagacttatgtgaccaaattgaataaaagaaataagttaagggatcggc 2232616  T
Q  253 agatcaattaagcc 266  Q
    ||||||||||||||    
T  2232615 agatcaattaagcc 2232602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 65 - 266
Target Start/End: Original strand, 54354308 - 54354509
Alignment:
Q  65 aaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaaaattgaaccaaatgg 164  Q
    ||||||||||||||||||||||| |||||| | |||||||||  |||||||| |||||| |||| ||| | ||||||||||||||||||| ||||||| |    
T  54354308 aaattaggtgttggtgatacactgtaaaatctgatagacctctataatccaatggtctctttttatagggaattaaaattatcaaaattggaccaaattg 54354407  T
Q  165 aataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatcaattaag 264  Q
    ||| ||||||||||||||||||||||||||||||||||||| | ||| ||||||||||| ||||||| ||||| |||||||||||| |||||||||||||    
T  54354408 aatcaaagaaataagttaagggacgtgtttgagaaagttaagacttaagggaccaaattaaataaaagaaataggttaagggaccggcagatcaattaag 54354507  T
Q  265 cc 266  Q
    ||    
T  54354508 cc 54354509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 67 - 263
Target Start/End: Original strand, 5691014 - 5691209
Alignment:
Q  67 attaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaaaattgaaccaaatggaa 166  Q
    ||||||||||||||||||||| |||||| | |||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||| || || |  ||    
T  5691014 attaggtgttggtgatacactgtaaaatctgatagacctccgtaatccaacggtctctttttttaggggatttaaattatcaaaattggac-aagtttaa 5691112  T
Q  167 taaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatcaattaa 263  Q
    |||||||||||||||||||||||||||||||||| |||| | ||||| ||| ||||||||||||| |||||||||||||||||| ||||||||||||    
T  5691113 taaaagaaataagttaagggacgtgtttgagaaaattaagacttatgtgactaaattgaataaaagaaataagttaagggaccggcagatcaattaa 5691209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 52 - 272
Target Start/End: Original strand, 50881020 - 50881233
Alignment:
Q  52 gaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaaaa 151  Q
    ||||||| ||||||||||||||||||||| ||||||||||||| |  ||||||| | ||||||||        |||||||| ||||||||||||||||||    
T  50881020 gaagaaaataaataaattaggtgttggtggtacactataaaatatggtagaccttcataatccaat-------ttttttaggggattaaaattatcaaaa 50881112  T
Q  152 ttgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccga 251  Q
    |||||| |||| ||||||||||||||| |||||||||||||||||||||||||| | ||||| |  |||||||||||||| |||||||||||||||||||    
T  50881113 ttgaactaaattgaataaaagaaataaattaagggacgtgtttgagaaagttaagacttatgtggtcaaattgaataaaagaaataagttaagggaccga 50881212  T
Q  252 cagatcaattaagccaaaaat 272  Q
    || ||||||||||||||||||    
T  50881213 cacatcaattaagccaaaaat 50881233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 68 - 266
Target Start/End: Complemental strand, 54353221 - 54353023
Alignment:
Q  68 ttaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaaaattgaaccaaatggaat 167  Q
    ||||||||| ||||||||| ||||||| | |||||||| ||||||||||||||||| |||||| | ||||||||||||| ||||||| ||||||| || |    
T  54353221 ttaggtgttagtgatacacgataaaatctgatagaccttcgtaatccaacggtctctttttttcggggattaaaattataaaaattggaccaaattgagt 54353122  T
Q  168 aaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatcaattaagcc 266  Q
    ||||||||||||||||||||| ||||||| |||||||| | |||||||| |||||||||||||| ||||||||||| |||||| |||||||||||||||    
T  54353121 aaaagaaataagttaagggacatgtttgataaagttaagacttatgggatcaaattgaataaaagaaataagttaaaggaccgtcagatcaattaagcc 54353023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 52 - 265
Target Start/End: Complemental strand, 11347026 - 11346813
Alignment:
Q  52 gaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaaaa 151  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |  ||||||| | |||||||| ||||||  |||| || ||||||||||||||||||    
T  11347026 gaagaaagtaaataaattaggtgttggtgatacactatacaatatggtagaccttcataatccaatggtctctcttttcaggggattaaaattatcaaaa 11346927  T
Q  152 ttgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccga 251  Q
    ||| | ||||| ||||||||||||||| |||||| |||||||||| |||||||| | ||||  ||||||||| ||||||| |||||| ||||||||||||    
T  11346926 ttggaacaaattgaataaaagaaataaattaaggcacgtgtttgataaagttaagatttatatgaccaaattaaataaaagaaataaattaagggaccga 11346827  T
Q  252 cagatcaattaagc 265  Q
    ||||||||||||||    
T  11346826 cagatcaattaagc 11346813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 50 - 266
Target Start/End: Original strand, 11348374 - 11348589
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaa 149  Q
    ||||||||||||||| |||||||||| ||||||| |||||||||| | ||||||||||||||| |||||||||| |||| ||  | ||||||||||||||    
T  11348374 aagaagaaagtaaattaattaggtgt-ggtgatatactataaaatctgatagacctccgtaattcaacggtctctttttctaaggaattaaaattatcaa 11348472  T
Q  150 aattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggacc 249  Q
    ||||| | |||||  |||||||||||| |||||||| || ||| ||| |||||||| | ||||| ||||||||||||||||| |||||||||||||||||    
T  11348473 aattggatcaaattaaataaaagaaattagttaaggaacatgtatgataaagttaatacttatgagaccaaattgaataaaagaaataagttaagggacc 11348572  T
Q  250 gacagatcaattaagcc 266  Q
    | |||||||||||||||    
T  11348573 ggcagatcaattaagcc 11348589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 50 - 205
Target Start/End: Complemental strand, 17741046 - 17740891
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaa 149  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||  |||||| |||||||||||||||||    
T  17741046 aagaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagacctccgtaatccgacggtctctatttttaaaggattaaaattatcaa 17740947  T
Q  150 aattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaa 205  Q
    ||||| | |||||  |||||||||||||||||||||||| ||||||||||||||||    
T  17740946 aattggatcaaatttaataaaagaaataagttaagggacatgtttgagaaagttaa 17740891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 50 - 205
Target Start/End: Complemental strand, 19042366 - 19042211
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaa 149  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||  |||||| |||||||||||||||||    
T  19042366 aagaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagacctccgtaatccgacggtctctatttttaaaggattaaaattatcaa 19042267  T
Q  150 aattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaa 205  Q
    ||||| | |||||  |||||||||||||||||||||||| ||||||||||||||||    
T  19042266 aattggatcaaatttaataaaagaaataagttaagggacatgtttgagaaagttaa 19042211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 50 - 265
Target Start/End: Complemental strand, 47429838 - 47429628
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtc--tcattttttagaggattaaaattatc 147  Q
    |||||||||||||||||||||| |||||||||||||||||||||| | |||||||||||||||||||| |||  |  |||||||| ||||||||||||||    
T  47429838 aagaagaaagtaaataaattagatgttggtgatacactataaaatctaatagacctccgtaatccaacagtctttttttttttaggggattaaaattatc 47429739  T
Q  148 aaaattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaaggga 247  Q
    ||||||| ||||||| ||| ||||||       ||| ||||||||||||||||||||| | ||||| ||||||||||||||||| |||||||||||||||    
T  47429738 aaaattggaccaaattgaacaaaaga-------taaaggacgtgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaaggga 47429646  T
Q  248 ccgacagatcaattaagc 265  Q
    |   ||||||||||||||    
T  47429645 catgcagatcaattaagc 47429628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 58 - 265
Target Start/End: Original strand, 53765876 - 53766083
Alignment:
Q  58 agtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaaaattgaac 157  Q
    ||||||||||| || || |||||||||||| |||||| |  ||||||||||||||||||  || ||  ||||||| ||||||||||||| ||||||| |     
T  53765876 agtaaataaatcagatggtggtgatacactgtaaaatctcgtagacctccgtaatccaatagtttctctttttaggggattaaaattattaaaattggat 53765975  T
Q  158 caaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatc 257  Q
    ||||| ||||||||||||||||||||||||||||||||||||| |||| | ||| || |||||||||||||||| |||||||||||||||||  ||||||    
T  53765976 caaattgaataaaagaaataagttaagggacgtgtttgagaaaattaagacttacggaaccaaattgaataaaagaaataagttaagggacccgcagatc 53766075  T
Q  258 aattaagc 265  Q
    ||||||||    
T  53766076 aattaagc 53766083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 33 - 183
Target Start/End: Original strand, 37610648 - 37610798
Alignment:
Q  33 gaagatgaggaaagggaaagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttag 132  Q
    |||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||  ||||||||    
T  37610648 gaagatgagggaagaagaagaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagacctccgtaatccaacggtctttttttttag 37610747  T
Q  133 aggattaaaattatcaaaattgaaccaaatggaataaaagaaataagttaa 183  Q
     ||||||||||||||||||||| ||||||| |||||||| |||||||||||    
T  37610748 gggattaaaattatcaaaattggaccaaattgaataaaaaaaataagttaa 37610798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 50 - 244
Target Start/End: Original strand, 47917515 - 47917708
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaa 149  Q
    |||| ||||||||||||||| ||||||||| |||||||||||||| | ||| ||||||||||||||||  |||   ||||||| ||||||||||||| ||    
T  47917515 aagaggaaagtaaataaattcggtgttggtaatacactataaaatctgataaacctccgtaatccaacaatctttatttttaggggattaaaattattaa 47917614  T
Q  150 aattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaag 244  Q
    ||||  | ||||| |||||||||||||||||| ||||||||||||||||||  ||| | ||||| ||||||||| ||||||| ||||||||||||    
T  47917615 aattagatcaaattgaataaaagaaataagtt-agggacgtgtttgagaaaactaagatttatgagaccaaattaaataaaagaaataagttaag 47917708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 98 - 266
Target Start/End: Original strand, 46986043 - 46986208
Alignment:
Q  98 atagacctccgtaatccaacggtctcattttttagaggattaaaattatcaaaattgaaccaaatggaataaaagaaataagttaagggacgtgtttgag 197  Q
    |||||||||||||||||||||||||  ||||||| |||||||||||||||||||||  |||||||  ||||| | |||||||||||||||||||||||||    
T  46986043 atagacctccgtaatccaacggtct--ttttttaaaggattaaaattatcaaaatttgaccaaatttaataaga-aaataagttaagggacgtgtttgag 46986139  T
Q  198 aaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatcaattaagcc 266  Q
    | |||||| | |||| |||||||||||||||||| |||||| ||||||| ||| || ||||||||||||    
T  46986140 agagttaagacttattggaccaaattgaataaaagaaataaattaaggggccggcaaatcaattaagcc 46986208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 52 - 263
Target Start/End: Original strand, 15290394 - 15290604
Alignment:
Q  52 gaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaaaa 151  Q
    ||||||| |||||||||||||| ||| |||||||||||||||| |  ||||||| | |||| ||| |||||  ||||||| | |||||||||||| ||||    
T  15290394 gaagaaaataaataaattaggtattgatgatacactataaaatatggtagaccttcataattcaatggtctt-ttttttaaatgattaaaattattaaaa 15290492  T
Q  152 ttgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccga 251  Q
    ||| | ||||| ||||||| ||||||| ||||  ||| ||||||||||| |||| | ||||| || |||||| ||||||| |||||||||||||||||||    
T  15290493 ttggatcaaattgaataaatgaaataatttaatagacatgtttgagaaaattaagacttatgtgatcaaattaaataaaagaaataagttaagggaccga 15290592  T
Q  252 cagatcaattaa 263  Q
    ||||||||||||    
T  15290593 cagatcaattaa 15290604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 50 - 188
Target Start/End: Complemental strand, 35758220 - 35758082
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaa 149  Q
    |||||||||||||||||||||||||||||||||||||| |||||| | |||||| | |||||||||||||| |  ||||||   ||||||||||||||||    
T  35758220 aagaagaaagtaaataaattaggtgttggtgatacactgtaaaatctgatagacattcgtaatccaacggtttgttttttttttggattaaaattatcaa 35758121  T
Q  150 aattgaaccaaatggaataaaagaaataagttaagggac 188  Q
    ||||| ||||||| |||||||||||||||||||||||||    
T  35758120 aattggaccaaattgaataaaagaaataagttaagggac 35758082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 135 - 271
Target Start/End: Complemental strand, 23091322 - 23091186
Alignment:
Q  135 gattaaaattatcaaaattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataa 234  Q
    |||||||||||||||| ||| ||||||| ||||||||||| ||||||||| |||||||||||||||||||| | ||||| ||||||||||||||||| ||    
T  23091322 gattaaaattatcaaagttggaccaaattgaataaaagaattaagttaagagacgtgtttgagaaagttaagacttatgtgaccaaattgaataaaagaa 23091223  T
Q  235 ataagttaagggaccgacagatcaattaagccaaaaa 271  Q
    |||||||||  ||||| ||||||||||||||| ||||    
T  23091222 ataagttaaaagaccggcagatcaattaagcctaaaa 23091186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 50 - 185
Target Start/End: Original strand, 55210810 - 55210945
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaa 149  Q
    ||||||||||||||||||||| |||||||||||||| |||||||| | ||||| ||||||||| |||| || || |||||||| ||||||||||||||||    
T  55210810 aagaagaaagtaaataaattatgtgttggtgatacattataaaatctgatagatctccgtaattcaacagtatctttttttagtggattaaaattatcaa 55210909  T
Q  150 aattgaaccaaatggaataaaagaaataagttaagg 185  Q
    |||||| ||||||  |||||||||||||||||||||    
T  55210910 aattgatccaaatttaataaaagaaataagttaagg 55210945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 125 - 263
Target Start/End: Complemental strand, 53764569 - 53764432
Alignment:
Q  125 ttttttagaggattaaaattatcaaaattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattg 224  Q
    |||||||| ||||||||||||||||||||  || |||| |||||||||||||||||||| ||||||||||||||||||||| | ||||| ||||||||||    
T  53764569 ttttttaggggattaaaattatcaaaatttgactaaattgaataaaagaaataagttaaaggacgtgtttgagaaagttaagacttatgagaccaaattg 53764470  T
Q  225 aataaaataaataagttaagggaccgacagatcaattaa 263  Q
    ||||||| ||||||||||| ||||||  |||||||||||    
T  53764469 aataaaa-aaataagttaaaggaccggtagatcaattaa 53764432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 49 - 178
Target Start/End: Complemental strand, 10978221 - 10978093
Alignment:
Q  49 aaagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatca 148  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| |||||||||||||| || |||||||| ||||||||||||| |    
T  10978221 aaagaagaaagtaaa-aaattaggtgatggtgatacactataaaattttatagaccttcgtaatccaacggtttctttttttaggggattaaaattatta 10978123  T
Q  149 aaattgaaccaaatggaataaaagaaataa 178  Q
    |||||| || || | |||||||||||||||    
T  10978122 aaattggactaagttgaataaaagaaataa 10978093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 156 - 271
Target Start/End: Complemental strand, 43392736 - 43392621
Alignment:
Q  156 accaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacaga 255  Q
    ||||||| |||||||||||||||||| ||||||||| ||||||||||||| | ||||| ||||||||||||||||| |||||||||||||||||||||||    
T  43392736 accaaattgaataaaagaaataagttcagggacgtgcttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaagggaccgacaga 43392637  T
Q  256 tcaattaagccaaaaa 271  Q
    ||||||| || |||||    
T  43392636 tcaattacgcaaaaaa 43392621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 134 - 269
Target Start/End: Complemental strand, 53178833 - 53178698
Alignment:
Q  134 ggattaaaattatcaaaattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaata 233  Q
    |||||||||| |||||||||| | ||||| |||||||||||||||||||||| |||||||||||||||||||   |||||  | |||||||||||||| |    
T  53178833 ggattaaaatgatcaaaattggatcaaattgaataaaagaaataagttaaggaacgtgtttgagaaagttaaggcttatgaaatcaaattgaataaaaaa 53178734  T
Q  234 aataagttaagggaccgacagatcaattaagccaaa 269  Q
    |||||||||||||| || ||||||||||||||||||    
T  53178733 aataagttaagggatcggcagatcaattaagccaaa 53178698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 134 - 266
Target Start/End: Original strand, 17117387 - 17117517
Alignment:
Q  134 ggattaaaattatcaaaattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaata 233  Q
    |||||||||| |||||||||   |||||| |||||||| ||| |  ||||||||||||||||||||| |||| | ||||| ||||||||||||||||| |    
T  17117387 ggattaaaatcatcaaaatttgcccaaattgaataaaaaaaaaa--ttaagggacgtgtttgagaaacttaagacttatgagaccaaattgaataaaaga 17117484  T
Q  234 aataagttaagggaccgacagatcaattaagcc 266  Q
    |||||||||||||||||||||||||||||||||    
T  17117485 aataagttaagggaccgacagatcaattaagcc 17117517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 31 - 171
Target Start/End: Complemental strand, 50879922 - 50879782
Alignment:
Q  31 atgaagatgaggaaagggaaagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcatttttt 130  Q
    ||||||||||||||||   |||||||||| ||| |||||||||||||||||||||||||||||| | |||||||||||||||| |||| | |  |||| |    
T  50879922 atgaagatgaggaaagaagaagaagaaaggaaacaaattaggtgttggtgatacactataaaatctgatagacctccgtaatctaacgatttttttttct 50879823  T
Q  131 agaggattaaaattatcaaaattgaaccaaatggaataaaa 171  Q
    |  ||||||||||||||||||||| || |||| ||||||||    
T  50879822 atgggattaaaattatcaaaattggacaaaattgaataaaa 50879782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 156 - 270
Target Start/End: Complemental strand, 23072169 - 23072056
Alignment:
Q  156 accaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacaga 255  Q
    ||||||| |||||||||||||||||||||| |||| |||||||||||||| | ||||||||||||||||||||||  |||| | ||||||||||  ||||    
T  23072169 accaaattgaataaaagaaataagttaagg-acgtctttgagaaagttaagacttatgggaccaaattgaataaatgaaatgaattaagggaccagcaga 23072071  T
Q  256 tcaattaagccaaaa 270  Q
    |||||||| ||||||    
T  23072070 tcaattaaaccaaaa 23072056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 34014596 - 34014508
Alignment:
Q  178 agttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatcaattaagcc 266  Q
    |||||||||| ||||||| || |||||| | ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  34014596 agttaagggatgtgtttgcgacagttaagatttatgggaccaaattgaataaaagaaataagttaagggaccggcagatcaattaagcc 34014508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 50 - 141
Target Start/End: Original strand, 33111747 - 33111837
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaa 141  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| ||||| | || |||||||| ||||||||    
T  33111747 aagaagaaagtaaataaattaggtgtgggagatacactataaaattttatagacctccgtaatacaacgatatctttttttag-ggattaaa 33111837  T

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Target: chr3; HSP #51
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 136 - 264
Target Start/End: Original strand, 33113306 - 33113426
Alignment:
Q  136 attaaaattatcaaaattgaaccaaatggaataaaa-gaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataa 234  Q
    ||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||| |||||||||         |||||||||||||||| ||    
T  33113306 attaaaattatcaaaattggaccaaattgaataaaaagaaataagttaagggacgtgtttgaaaaagttaaa---------accaaattgaataaaagaa 33113396  T
Q  235 ataagttaagggaccgacagatcaattaag 264  Q
    |||| |||||||| ||  ||||||||||||    
T  33113397 ataaattaagggatcggtagatcaattaag 33113426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 166 - 247
Target Start/End: Complemental strand, 50879594 - 50879513
Alignment:
Q  166 ataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaaggga 247  Q
    |||||| |||||| ||||||||||||||| |||||||||| | ||||||||||||||||||||||| |||||||||||||||    
T  50879594 ataaaaaaaataatttaagggacgtgtttaagaaagttaagatttatgggaccaaattgaataaaagaaataagttaaggga 50879513  T

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Target: chr3; HSP #53
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 24376458 - 24376546
Alignment:
Q  178 agttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatcaattaagcc 266  Q
    |||||||||| ||||||| ||  ||||||| ||||| ||||||||||||||||| ||||||||||| |||||| |||||||||||||||    
T  24376458 agttaagggatgtgtttgtgactgttaaaacttatgagaccaaattgaataaaagaaataagttaaaggaccggcagatcaattaagcc 24376546  T

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Target: chr3; HSP #54
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 209 - 276
Target Start/End: Original strand, 34015829 - 34015896
Alignment:
Q  209 ttatgggaccaaattgaataaaataaataagttaagggaccgacagatcaattaagccaaaaataaat 276  Q
    ||||||||||||||||||||||| |||||| |||||||||||||| |||||||||||| ||| |||||    
T  34015829 ttatgggaccaaattgaataaaagaaataacttaagggaccgacaaatcaattaagcctaaactaaat 34015896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 27750461 - 27750549
Alignment:
Q  178 agttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatcaattaagcc 266  Q
    |||||||||| |||||||| ||| |||||| ||||| ||||||||||||||||| |||||| |||| |||| | |||||||||| ||||    
T  27750461 agttaagggatgtgtttgaaaaaattaaaacttatgagaccaaattgaataaaagaaataaattaaaggactggcagatcaattgagcc 27750549  T

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Target: chr3; HSP #56
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 202 - 266
Target Start/End: Original strand, 53101827 - 53101891
Alignment:
Q  202 ttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatcaattaagcc 266  Q
    |||| |||||| |||||||||||||||||| |||||| ||||||||||| |||||||||||||||    
T  53101827 ttaagaattataggaccaaattgaataaaagaaataacttaagggaccggcagatcaattaagcc 53101891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 31 - 106
Target Start/End: Complemental strand, 43392841 - 43392766
Alignment:
Q  31 atgaagatgaggaaagggaaagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctc 106  Q
    |||||||||||| |||   ||||||||| |||||||||| |||||||||| ||||||||||||| | |||||||||    
T  43392841 atgaagatgagggaagaagaagaagaaaataaataaatttggtgttggtggtacactataaaatctgatagacctc 43392766  T

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Target: chr3; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 173 - 265
Target Start/End: Complemental strand, 27749199 - 27749107
Alignment:
Q  173 aaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatcaattaagc 265  Q
    |||| ||||||||||   |||| |||||||||| | ||||| ||| ||||||||||||| | ||||||||||| ||||  |||||||||||||    
T  27749199 aaatgagttaagggatacgtttaagaaagttaagacttatgtgactaaattgaataaaagacataagttaaggaaccggtagatcaattaagc 27749107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 214 - 266
Target Start/End: Complemental strand, 35758116 - 35758064
Alignment:
Q  214 ggaccaaattgaataaaataaataagttaagggaccgacagatcaattaagcc 266  Q
    |||||||||||||||||| |||||||||||||||||| |||||  ||||||||    
T  35758116 ggaccaaattgaataaaagaaataagttaagggaccggcagattgattaagcc 35758064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 37610797 - 37610841
Alignment:
Q  219 aaattgaataaaataaataagttaagggaccgacagatcaattaa 263  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||    
T  37610797 aaattgaataaaagaaataagttaagggaccggcagatcaattaa 37610841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 56 - 120
Target Start/End: Complemental strand, 53764959 - 53764896
Alignment:
Q  56 aaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggt 120  Q
    |||||||| |||||| ||||||||||||||| ||||||| | ||||||||||||||| |||||||    
T  53764959 aaagtaaa-aaattaagtgttggtgatacaccataaaatctgatagacctccgtaattcaacggt 53764896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 53 - 91
Target Start/End: Complemental strand, 53101735 - 53101697
Alignment:
Q  53 aagaaagtaaataaattaggtgttggtgatacactataa 91  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  53101735 aagaaagtaaataaattaagtgttggtgatacactataa 53101697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 253
Target Start/End: Original strand, 21729382 - 21729426
Alignment:
Q  209 ttatgggaccaaattgaataaaataaataagttaagggaccgaca 253  Q
    ||||||||| ||||||||||||| |||||| ||||||||||||||    
T  21729382 ttatgggactaaattgaataaaagaaataaattaagggaccgaca 21729426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 106
Target Start/End: Complemental strand, 23072274 - 23072199
Alignment:
Q  31 atgaagatgaggaaagggaaagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctc 106  Q
    |||||||||||| |||   |||||||||||||||||||  |||||||| | ||||||||||||| | ||||| |||    
T  23072274 atgaagatgagggaagaagaagaagaaagtaaataaatctggtgttggcggtacactataaaatctgatagatctc 23072199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 213 - 245
Target Start/End: Complemental strand, 23072172 - 23072140
Alignment:
Q  213 gggaccaaattgaataaaataaataagttaagg 245  Q
    ||||||||||||||||||| |||||||||||||    
T  23072172 gggaccaaattgaataaaagaaataagttaagg 23072140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 156 - 188
Target Start/End: Complemental strand, 34014558 - 34014526
Alignment:
Q  156 accaaatggaataaaagaaataagttaagggac 188  Q
    ||||||| |||||||||||||||||||||||||    
T  34014558 accaaattgaataaaagaaataagttaagggac 34014526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 157; Significance: 3e-83; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 50 - 266
Target Start/End: Original strand, 32348939 - 32349155
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaa 149  Q
    |||||||||||||||||||||||||||| |||||||||||||||| | |||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  32348939 aagaagaaagtaaataaattaggtgttgatgatacactataaaatctgatagacctccgtaatccaacggtctctttttttaggggattaaaattatcaa 32349038  T
Q  150 aattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggacc 249  Q
    ||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||| | ||||  ||||||||||||||||| |||||| ||||||||||    
T  32349039 aattggaccaaattgaataaaagaaatcagttaagggacgtgtttgagaaagttaagacttataagaccaaattgaataaaagaaataaattaagggacc 32349138  T
Q  250 gacagatcaattaagcc 266  Q
    | |||||||||||||||    
T  32349139 ggcagatcaattaagcc 32349155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 31 - 276
Target Start/End: Complemental strand, 32712587 - 32712345
Alignment:
Q  31 atgaagatgaggaaagggaaagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcatttttt 130  Q
    |||||||||||| |||   ||||||||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  32712587 atgaagatgagggaag---aagaagaaagtaaataagttaggtgttggtggtacactataaaatttgatagacctccgtaatccaacggtctcttttttt 32712491  T
Q  131 agaggattaaaattatcaaaattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaa 230  Q
    || ||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||||| |||||||||  ||| | |||| |||||||| ||||||||    
T  32712490 aggggattaaaattatcaaaattggaccaaattgaataaaagaaataagttaagagacgtatttgagaaatgtaagatttataggaccaaactgaataaa 32712391  T
Q  231 ataaataagttaagggaccgacagatcaattaagccaaaaataaat 276  Q
    | ||||||||||||||||||||||||||||||| || |||||||||    
T  32712390 agaaataagttaagggaccgacagatcaattaaacctaaaataaat 32712345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 53 - 266
Target Start/End: Original strand, 11801247 - 11801460
Alignment:
Q  53 aagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaaaat 152  Q
    ||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||| ||||| || |||||||||||||||||||    
T  11801247 aagaaagtaaataaattaggtgttaatgatacactataaaatttgatagacctccgtaatccaacggtctcttttttgaggggattaaaattatcaaaat 11801346  T
Q  153 tgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgac 252  Q
    || ||||||| ||||||||||||| |||||||||||||||||||||||||||| | |||| |||||||||||||||||| |||||| ||||||||||| |    
T  11801347 tggaccaaattgaataaaagaaatcagttaagggacgtgtttgagaaagttaagacttataggaccaaattgaataaaagaaataaattaagggaccggc 11801446  T
Q  253 agatcaattaagcc 266  Q
    ||||||||||||||    
T  11801447 agatcaattaagcc 11801460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 50 - 266
Target Start/End: Original strand, 32713785 - 32714001
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaa 149  Q
    |||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| | |||||||| ||||||||||||||||    
T  32713785 aagaagaaagtaaataaattaggtgttggtgatacactgtaaaatcttatagacctccgtaatccaacggtcactttttttaggggattaaaattatcaa 32713884  T
Q  150 aattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggacc 249  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| | |||||| |||||| ||||||||| ||||||||||  |||||    
T  32713885 aattggaccaaattgaataaaagaaataagttaagggacgtgtttgagaaagttaagatttatggaaccaaactgaataaaagaaataagttacaggacc 32713984  T
Q  250 gacagatcaattaagcc 266  Q
      |||||||||||||||    
T  32713985 agcagatcaattaagcc 32714001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 31 - 264
Target Start/End: Original strand, 34996647 - 34996877
Alignment:
Q  31 atgaagatgaggaaagggaaagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcatttttt 130  Q
    |||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||  ||||||    
T  34996647 atgaagatgagggaag---aagaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagaccttcgtaatccaacggtctgttttttt 34996743  T
Q  131 agaggattaaaattatcaaaattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaa 230  Q
    ||  |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| |||||||||||||| | ||||||||| ||||||||||||    
T  34996744 aggagattaaaattatcaaaattggaccaaattgaataaaagaaataagttaagggacgtatttgagaaagttaagacttatgggactaaattgaataaa 34996843  T
Q  231 ataaataagttaagggaccgacagatcaattaag 264  Q
    | ||||||||| ||||||||||| ||||||||||    
T  34996844 agaaataagttcagggaccgacaaatcaattaag 34996877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 50 - 267
Target Start/End: Original strand, 3000695 - 3000912
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaa 149  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| | |||||||| |||||||||||| |||   ||||||| ||||||||||||||||    
T  3000695 aagaagaaagtaaataaattaggtgttagtgatacactataaaatctgatagaccttcgtaatccaacgatctgtgtttttaggggattaaaattatcaa 3000794  T
Q  150 aattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggacc 249  Q
    ||||| || |||| |||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||||    
T  3000795 aattggactaaattgaataaaagaaataagttaagggaggtgtttgagaaagttaagatttatgggaccaaattgaataaaagaaataagttaagggacc 3000894  T
Q  250 gacagatcaattaagcca 267  Q
    |||| |||||||||||||    
T  3000895 gacaaatcaattaagcca 3000912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 31 - 267
Target Start/End: Complemental strand, 34995586 - 34995351
Alignment:
Q  31 atgaagatgaggaaagggaaagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcatttttt 130  Q
    |||||||||||| |||   |||||||||||||||||||||| |||||||||||||||||||||| | |||||||| ||||||| ||||||||  ||||||    
T  34995586 atgaagatgagggaagaagaagaagaaagtaaataaattagatgttggtgatacactataaaatctgatagaccttcgtaatctaacggtctgttttttt 34995487  T
Q  131 agaggattaaaattatcaaaattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaa 230  Q
    || ||||||||||||| ||||||| ||||||| ||||||||||||||||||||  |||||||||||||||||||| | ||||| ||||||||||||||||    
T  34995486 aggggattaaaattattaaaattggaccaaattgaataaaagaaataagttaa-agacgtgtttgagaaagttaagacttatgagaccaaattgaataaa 34995388  T
Q  231 ataaataagttaagggaccgacagatcaattaagcca 267  Q
    | ||||||||||| |||||||||||||||||||||||    
T  34995387 agaaataagttaaaggaccgacagatcaattaagcca 34995351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 50 - 266
Target Start/End: Complemental strand, 18573100 - 18572885
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaa 149  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||||||| || || |||||||| ||||||||||||||||    
T  18573100 aagaagaaagtaaataaattatgtgttggtgatacactgtaaaatttgatagacctccgtaatccaacagtgtc-ttttttaggggattaaaattatcaa 18573002  T
Q  150 aattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggacc 249  Q
    |||||  |||| | ||||||||||||||||||||||||||| ||| |||||||||| | ||||||||||||||||||||||| ||||||||||| |||||    
T  18573001 aattggcccaatttgaataaaagaaataagttaagggacgtttttaagaaagttaagacttatgggaccaaattgaataaaagaaataagttaacggacc 18572902  T
Q  250 gacagatcaattaagcc 266  Q
    | |||||||||||||||    
T  18572901 ggcagatcaattaagcc 18572885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 50 - 266
Target Start/End: Complemental strand, 32348024 - 32347808
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaa 149  Q
    |||||||||||||||||||||||||||| |||||||||||||||| | ||||||| ||||||||||||| |||| |||||||| ||||||||||||||||    
T  32348024 aagaagaaagtaaataaattaggtgttgatgatacactataaaatctgatagacccccgtaatccaacgttctctttttttaggggattaaaattatcaa 32347925  T
Q  150 aattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggacc 249  Q
    ||||| ||||||| ||||||||||||| | |||||||||||||||||||||||||| | ||||  ||||||||||||||||| |||||| |||||| |||    
T  32347924 aattggaccaaattgaataaaagaaatcacttaagggacgtgtttgagaaagttaagacttatatgaccaaattgaataaaagaaataaattaaggaacc 32347825  T
Q  250 gacagatcaattaagcc 266  Q
      |||||||||||||||    
T  32347824 agcagatcaattaagcc 32347808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 100 - 266
Target Start/End: Original strand, 29479146 - 29479312
Alignment:
Q  100 agacctccgtaatccaacggtctcattttttagaggattaaaattatcaaaattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaa 199  Q
    ||||||| |||||||||| ||||| |||  ||| ||||| ||||||| ||||||| ||||||| |||||||||||||||||||| ||||||| |||||||    
T  29479146 agacctctgtaatccaactgtctcttttcgtaggggattgaaattattaaaattggaccaaattgaataaaagaaataagttaaaggacgtgattgagaa 29479245  T
Q  200 agttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatcaattaagcc 266  Q
    |||||||| ||||||||||| ||||||||||| |||||| |||||||| || |||||||||||||||    
T  29479246 agttaaaacttatgggaccagattgaataaaagaaataatttaagggatcggcagatcaattaagcc 29479312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 50 - 263
Target Start/End: Original strand, 19383057 - 19383262
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaa 149  Q
    |||||||||||||||||||||| ||||| |||||||||||||||| | |||||||  |||||||||||||||||  ||||||| | ||||||||||||||    
T  19383057 aagaagaaagtaaataaattagatgttg-tgatacactataaaatctgatagaccatcgtaatccaacggtctc--tttttagggcattaaaattatcaa 19383153  T
Q  150 aattgaaccaaatggaataaaagaaa--taagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaaggga 247  Q
    ||||  | ||||| |||||||| |||  |||||||||||||||||||||||||||||| | ||||       |||||||||||| |||||||||||||||    
T  19383154 aattagatcaaattgaataaaaaaaaaataagttaagggacgtgtttgagaaagttaagacttat-------aattgaataaaagaaataagttaaggga 19383246  T
Q  248 ccgacagatcaattaa 263  Q
    ||| | ||||||||||    
T  19383247 ccggcggatcaattaa 19383262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 156 - 270
Target Start/End: Original strand, 18574301 - 18574415
Alignment:
Q  156 accaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacaga 255  Q
    ||||||| |||||||||||||||||| ||||||||| ||||||||||||| | |||||| |||||||||||||||| |||||||| ||||||||| ||||    
T  18574301 accaaattgaataaaagaaataagttcagggacgtgcttgagaaagttaagacttatggaaccaaattgaataaaagaaataagtcaagggaccggcaga 18574400  T
Q  256 tcaattaagccaaaa 270  Q
    |||||||||||||||    
T  18574401 tcaattaagccaaaa 18574415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 56 - 154
Target Start/End: Complemental strand, 21094615 - 21094517
Alignment:
Q  56 aaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaaaattg 154  Q
    ||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||    
T  21094615 aaagtaaataaattaggtgttggtgatacactataaaatctagtagacctccgtaatccaacggtctctttttttaggggattaaagttatcaaaattg 21094517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 60 - 154
Target Start/End: Complemental strand, 27719941 - 27719848
Alignment:
Q  60 taaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaaaattg 154  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||    
T  27719941 taaataaattaggtgttggtgatacactataaaatctgatagacctccgtaatccaacggtctc-ttttttaggggattaaaatcatcaaaattg 27719848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 50 - 117
Target Start/End: Original strand, 21095281 - 21095348
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaac 117  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||    
T  21095281 aagaataaagtaaataaattaggtgttggtgatacactataaaatctggtagacctccgtaatccaac 21095348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 198 - 268
Target Start/End: Complemental strand, 29477827 - 29477757
Alignment:
Q  198 aaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatcaattaagccaa 268  Q
    |||||||| | ||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  29477827 aaagttaagatttatgagaccaaattgaataaaagaaataagttaagggaccggcagatcaattaagccaa 29477757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 467 - 512
Target Start/End: Complemental strand, 32865853 - 32865808
Alignment:
Q  467 gaaaaatcacatgtttcatgtttgttcgatgagacaatcattgtac 512  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  32865853 gaaaaatcacatgtttcatgtttgttcgatgagacaatcattgtac 32865808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 186 - 265
Target Start/End: Complemental strand, 19788327 - 19788248
Alignment:
Q  186 gacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatcaattaagc 265  Q
    |||||||||  ||||||||||| ||||| || |||||||||||||| ||| ||||||||||| |||||||| ||||||||    
T  19788327 gacgtgtttatgaaagttaaaacttatgagatcaaattgaataaaagaaacaagttaagggatcgacagatgaattaagc 19788248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 50 - 106
Target Start/End: Original strand, 18574215 - 18574271
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctc 106  Q
    |||||||||||||||||||  |||||||||| ||||||||||||| | |||||||||    
T  18574215 aagaagaaagtaaataaatccggtgttggtggtacactataaaatctgatagacctc 18574271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 186 - 266
Target Start/End: Complemental strand, 19762022 - 19761942
Alignment:
Q  186 gacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatcaattaagcc 266  Q
    |||||||||  |||| |||||| ||||  || |||||||||||||| ||| ||||||||||| |||||||| |||||||||    
T  19762022 gacgtgtttatgaaaattaaaacttataagatcaaattgaataaaagaaacaagttaagggatcgacagatgaattaagcc 19761942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 65 - 154
Target Start/End: Complemental strand, 7628526 - 7628436
Alignment:
Q  65 aaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtc-tcattttttagaggattaaaattatcaaaattg 154  Q
    ||||||||||||||||||||||| | |||| |  |||| |||| ||||| ||||||| |  |||||||| ||||| |||||||||||||||    
T  7628526 aaattaggtgttggtgatacactgtgaaatctggtagatctccataatctaacggtcttttttttttaggggattgaaattatcaaaattg 7628436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 94
Target Start/End: Complemental strand, 29477954 - 29477912
Alignment:
Q  52 gaagaaagtaaataaattaggtgttggtgatacactataaaat 94  Q
    ||||||||||||||||| ||||||||||||||||| |||||||    
T  29477954 gaagaaagtaaataaatcaggtgttggtgatacaccataaaat 29477912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 192 - 249
Target Start/End: Complemental strand, 25138868 - 25138811
Alignment:
Q  192 tttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggacc 249  Q
    ||||||| |||| ||||||| |||||||||||||||  || |||||||||||||||||    
T  25138868 tttgagacagtttaaaattaggggaccaaattgaatcgaaaaaataagttaagggacc 25138811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 7628388 - 7628312
Alignment:
Q  202 ttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatcaattaagccaaaaataaatca 278  Q
    |||||| |||||||||||| ||||  |||| || ||| |||||||||||  || |||||||||||||| || |||||    
T  7628388 ttaaaagttatgggaccaatttgacaaaaagaattaaattaagggaccgggagttcaattaagccaaatattaatca 7628312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 145
Target Start/End: Complemental strand, 18230536 - 18230452
Alignment:
Q  61 aaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaatta 145  Q
    |||| |||||||||||||||||||||| | ||||  |||  |||||| | |||||| |||||| ||||  || ||||||||||||    
T  18230536 aaattaattaggtgttggtgatacactgttaaatcatatgaacctcctttatccaatggtctctttttcaagcggattaaaatta 18230452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 156 - 188
Target Start/End: Complemental strand, 29477809 - 29477777
Alignment:
Q  156 accaaatggaataaaagaaataagttaagggac 188  Q
    ||||||| |||||||||||||||||||||||||    
T  29477809 accaaattgaataaaagaaataagttaagggac 29477777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 155; Significance: 5e-82; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 50 - 264
Target Start/End: Complemental strand, 19229054 - 19228840
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaa 149  Q
    |||||||||||||||||||||||||||| |||||||||||||||| | |||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  19229054 aagaagaaagtaaataaattaggtgttgatgatacactataaaatctaatagacctccgtaatccaacggtctctttttttaggggattaaaattatcaa 19228955  T
Q  150 aattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggacc 249  Q
    ||||| ||||||| ||||||||||||| |||||||| ||||||||||||||||||| | |||| |||||||||||||||||| |||||| ||||||||||    
T  19228954 aattggaccaaattgaataaaagaaatcagttaaggaacgtgtttgagaaagttaagacttataggaccaaattgaataaaagaaataaattaagggacc 19228855  T
Q  250 gacagatcaattaag 264  Q
    | |||||||||||||    
T  19228854 ggcagatcaattaag 19228840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 50 - 266
Target Start/End: Original strand, 19229975 - 19230191
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaa 149  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||| || ||||||||||||||||    
T  19229975 aagaagaaagtaaataaattaagtgttgatgatacactataaaatttgatagacctccgtaatccaacggtctcttttttgaggggattaaaattatcaa 19230074  T
Q  150 aattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggacc 249  Q
    ||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||| | |||| |||||||||||||||||| |||||| |||||||| |    
T  19230075 aattggaccaaattgaataaaagaaatcagttaagggacgtgtttgagaaagttaagacttataggaccaaattgaataaaagaaataaattaagggatc 19230174  T
Q  250 gacagatcaattaagcc 266  Q
    | |||||||||||||||    
T  19230175 ggcagatcaattaagcc 19230191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 31 - 275
Target Start/End: Complemental strand, 12372549 - 12372304
Alignment:
Q  31 atgaagatgaggaaagggaaagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcatttttt 130  Q
    |||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||| |  ||||||    
T  12372549 atgaagatgagggaagaagaagaagaaagtaaataaattaggtgttggtgatacactataaaatctgatagaccttcgtaatccaacggtatgttttttt 12372450  T
Q  131 agaggattaaaattatcaaaattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaa 230  Q
    || | ||||||||||||||||||| | ||||| |||||||| |||||||||||| |||||||||||||||||||| | ||||| ||||||||||||||||    
T  12372449 agggtattaaaattatcaaaattggatcaaattgaataaaacaaataagttaagagacgtgtttgagaaagttaagacttatgagaccaaattgaataaa 12372350  T
Q  231 ataaataagttaagggaccgacagatcaattaagcc-aaaaataaa 275  Q
    | |||||||||||||||||| ||||||||||||||| |||||||||    
T  12372349 acaaataagttaagggaccggcagatcaattaagcctaaaaataaa 12372304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 50 - 266
Target Start/End: Complemental strand, 39349696 - 39349480
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaa 149  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||| | |||||||||||||||| ||||||| | |||||||| ||||||||||||| ||    
T  39349696 aagaagaaagtaaataaattaggtgttggtgatccacgataaaatctaatagacctccgtaatcaaacggtcactttttttaggggattaaaattataaa 39349597  T
Q  150 aattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggacc 249  Q
    ||||||||||||| || ||||||||||||||||| ||||||||||||||||||||| | |||||| |||||||||||||||| ||||||||||| |||||    
T  39349596 aattgaaccaaattgagtaaaagaaataagttaaaggacgtgtttgagaaagttaagagttatggaaccaaattgaataaaagaaataagttaaaggacc 39349497  T
Q  250 gacagatcaattaagcc 266  Q
    | |||||||||||||||    
T  39349496 gtcagatcaattaagcc 39349480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 56 - 266
Target Start/End: Original strand, 39350553 - 39350763
Alignment:
Q  56 aaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaaaattga 155  Q
    |||| ||| ||||||||||||||||||||||| |||||| | |||||||||||||||||||||||||| |||||||||||||||||||||| |||||||     
T  39350553 aaagcaaaaaaattaggtgttggtgatacactgtaaaatctgatagacctccgtaatccaacggtctctttttttagaggattaaaattataaaaattgg 39350652  T
Q  156 accaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacaga 255  Q
    |||||||  | ||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||| |||||||||||||||||| || |    
T  39350653 accaaattaagtaaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggactaaattgaataaaagaaataagttaagggaccggcata 39350752  T
Q  256 tcaattaagcc 266  Q
    |||||||||||    
T  39350753 tcaattaagcc 39350763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 68 - 271
Target Start/End: Original strand, 9083216 - 9083419
Alignment:
Q  68 ttaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaaaattgaaccaaatggaat 167  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||| ||||||| ||||    
T  9083216 ttaggtgttggtgatacactataaaatcttatagaccttcgtaatccaacggtctccttttttaggggattaaaattatcaaaattggaccaaattgaat 9083315  T
Q  168 aaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatcaattaagcca 267  Q
    |||| ||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||||| |||| | |||||  |||| ||||||||||||||||    
T  9083316 aaaataaaaaagttaagggacgtgtttgagaaagttaagacttatgggaccaaattgaataaaagaaatgaattaagaaaccggcagatcaattaagcca 9083415  T
Q  268 aaaa 271  Q
    ||||    
T  9083416 aaaa 9083419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 50 - 263
Target Start/End: Original strand, 13278133 - 13278346
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaa 149  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||||||| |||| ||  ||||||||||||||||    
T  13278133 aagaataaagtaaataaattaggtgttggtgatacactataaaatctgatagacctccctaatccaacggtctctttttctatgggattaaaattatcaa 13278232  T
Q  150 aattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggacc 249  Q
    ||||| | ||||| |||  ||| ||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||||| |||||| ||||||||||    
T  13278233 aattggatcaaattgaagtaaaaaaataagttaagggacgtgtttgagaaagttaagacttatgagaccaaattgaataaaaaaaataaattaagggacc 13278332  T
Q  250 gacagatcaattaa 263  Q
    ||||||||||||||    
T  13278333 gacagatcaattaa 13278346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 63 - 266
Target Start/End: Complemental strand, 18654500 - 18654296
Alignment:
Q  63 ataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaaaattgaaccaaat 162  Q
    ||||||||||||||||||||||||| |||||| | |||||||||||||||||||||||||| ||||| |  |||||||||| |||||||||| |||||||    
T  18654500 ataaattaggtgttggtgatacactgtaaaatctgatagacctccgtaatccaacggtctcttttttaatgggattaaaatgatcaaaattggaccaaat 18654401  T
Q  163 gg-aataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatcaatt 261  Q
       ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| |||||| ||||||||||| ||||||||||    
T  18654400 tttaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggaccaaattgaataaaagaaataaattaagggaccggcagatcaatt 18654301  T
Q  262 aagcc 266  Q
    |||||    
T  18654300 aagcc 18654296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 31 - 269
Target Start/End: Original strand, 6803508 - 6803745
Alignment:
Q  31 atgaagatgaggaaagggaaagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcatttttt 130  Q
    |||||||||||| |||   |||||||||||||||||||||| |||||||||||||||||||||| | |||||| |  |||||| ||||||||  ||||||    
T  6803508 atgaagatgagggaagaagaagaagaaagtaaataaattagatgttggtgatacactataaaatctgatagacttt-gtaatctaacggtctgttttttt 6803606  T
Q  131 agaggattaaaattatcaaaattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaa 230  Q
    | |||||||||||||||||||||| ||||||| |||||||||||||||||||||  || ||||||||||| |||| | ||||| ||||||||| ||||||    
T  6803607 aaaggattaaaattatcaaaattggaccaaattgaataaaagaaataagttaagaaacatgtttgagaaaattaagacttatgtgaccaaattaaataaa 6803706  T
Q  231 ataaataagttaagggaccgacagatcaattaagccaaa 269  Q
    | |||||| ||||||||||||||||||||||||||||||    
T  6803707 agaaataaattaagggaccgacagatcaattaagccaaa 6803745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 51 - 272
Target Start/End: Complemental strand, 13277026 - 13276813
Alignment:
Q  51 agaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaaa 150  Q
    ||||||||||||||||||||||||||||||        |||||| | ||| |||||||||||||||||||||  |||||||  |||||||||||||||||    
T  13277026 agaagaaagtaaataaattaggtgttggtg--------taaaatgtgatacacctccgtaatccaacggtctttttttttaagggattaaaattatcaaa 13276935  T
Q  151 attgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccg 250  Q
    |||  ||||||| ||||||||||||||||||||||||||||||||||||| |||| | |||| |||||||||||||||||| ||||||||||||||||||    
T  13276934 atttgaccaaattgaataaaagaaataagttaagggacgtgtttgagaaaattaagatttataggaccaaattgaataaaagaaataagttaagggaccg 13276835  T
Q  251 acagatcaattaagccaaaaat 272  Q
     ||||||||||||||| |||||    
T  13276834 gcagatcaattaagcctaaaat 13276813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 64 - 266
Target Start/End: Complemental strand, 9082181 - 9081979
Alignment:
Q  64 taaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaaaattgaaccaaatg 163  Q
    ||||||||||||| | |||| |||||||||| | |||||| ||||| |||||||||||||||||| ||| ||||||||||||||||||||| |||||||     
T  9082181 taaattaggtgttagcgatatactataaaatctgatagacatccgtgatccaacggtctcattttctaggggattaaaattatcaaaattggaccaaatt 9082082  T
Q  164 gaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatcaattaa 263  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||| | |||||||||||||| |||| |||||||| ||||  |||||||||||    
T  9082081 gaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatggaatcaaattgaataaaagaaatgagttaaggaaccggtagatcaattaa 9081982  T
Q  264 gcc 266  Q
    |||    
T  9081981 gcc 9081979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 62 - 266
Target Start/End: Original strand, 18655566 - 18655770
Alignment:
Q  62 aataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaaaattgaaccaaa 161  Q
    |||||||||  ||||||||||||||  |||||| | |||||| | |||||| |||||||||| |||||||| ||||||||||||||||| ||| ||||||    
T  18655566 aataaattaattgttggtgatacaccgtaaaatctgatagactttcgtaattcaacggtctctttttttaggggattaaaattatcaaagttggaccaaa 18655665  T
Q  162 tggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatcaatt 261  Q
    | ||||||||||||||| |||||||||||||||||||||||||| | ||||| ||||||||||||||||| ||||||||||||| |||| ||||||||||    
T  18655666 ttgaataaaagaaataaattaagggacgtgtttgagaaagttaagacttatgtgaccaaattgaataaaagaaataagttaaggaaccggcagatcaatt 18655765  T
Q  262 aagcc 266  Q
    |||||    
T  18655766 aagcc 18655770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 31 - 266
Target Start/End: Original strand, 12373603 - 12373839
Alignment:
Q  31 atgaagatgaggaaagggaaagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcatttttt 130  Q
    |||||||||||| |||   |||||||||||||||||||||||||||||||||||| | |||||| | |||||| | ||||||||||||||||  ||||||    
T  12373603 atgaagatgagggaag---aagaagaaagtaaataaattaggtgttggtgatacagtgtaaaatctgatagacattcgtaatccaacggtctgttttttt 12373699  T
Q  131 agag----gattaaaattatcaaaattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaa 226  Q
            |||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||| | ||||||||| ||||||||    
T  12373700 ttttttttgattaaaattatcaaaattggaccaaattgaataaaataaataagttaagggacgtgtttgagaaagttaagacttatgggactaaattgaa 12373799  T
Q  227 taaaataaataagttaagggaccgacagatcaattaagcc 266  Q
    ||||| ||||||||||| |||||| | |||||||||||||    
T  12373800 taaaagaaataagttaaaggaccggcggatcaattaagcc 12373839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 31 - 271
Target Start/End: Complemental strand, 39164288 - 39164056
Alignment:
Q  31 atgaagatgaggaaagggaaagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcatttttt 130  Q
    |||||||||||||||  ||| ||| ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| |||| ||||  |||||     
T  39164288 atgaagatgaggaaaaagaa-gaaaaaagtaaataaattaggtgttggtgatacactataaaatttgataggcctccgtaattcaacagtctttttttta 39164190  T
Q  131 agaggattaaaattatcaaaattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaa 230  Q
    || |||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||||||| |||||||| | ||||| ||| ||||||||||||    
T  39164189 ag-ggattaaaat-atcaaaattggaccaaattgaataaaagaaataagttaagggacgtgtttgataaagttaagacttatgagactaaattgaataaa 39164092  T
Q  231 ataaataagttaagggaccgacagatcaattaagccaaaaa 271  Q
    |     ||||||| |||||  ||||||||||||||| ||||    
T  39164091 a-----aagttaatggaccagcagatcaattaagcctaaaa 39164056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 158 - 266
Target Start/End: Complemental strand, 8447185 - 8447077
Alignment:
Q  158 caaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatc 257  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||  |||||    
T  8447185 caaattgaataaaagaaataagttaagggacgtgtttgagaaagttaaaacttatgggaccaaattgaataaaagaaataagttaagggaccggtagatc 8447086  T
Q  258 aattaagcc 266  Q
    |||||||||    
T  8447085 aattaagcc 8447077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 50 - 184
Target Start/End: Complemental strand, 4032039 - 4031903
Alignment:
Q  50 aagaagaaagtaaata--aattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatc 147  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||| |  ||||| |||||||| |||||||||| |||||||| ||||||||||||||    
T  4032039 aagaagaaagtaaatataaattaggtgttggtgatacactataaaatctggtagacttccgtaattcaacggtctctttttttagtggattaaaattatc 4031940  T
Q  148 aaaattgaaccaaatggaataaaagaaataagttaag 184  Q
    ||||||| || |||| |||||||||||||||||||||    
T  4031939 aaaattggactaaattgaataaaagaaataagttaag 4031903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 50 - 183
Target Start/End: Original strand, 4032927 - 4033060
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaa 149  Q
    |||||||||||||||||| ||||||||  ||||||| |||||||| | |||||||||||||||||||||||||| |||||||| ||||||||||||| ||    
T  4032927 aagaagaaagtaaataaactaggtgttaatgatacattataaaatctgatagacctccgtaatccaacggtctctttttttagtggattaaaattattaa 4033026  T
Q  150 aattgaaccaaatggaataaaagaaataagttaa 183  Q
    ||||| ||||| |  ||||||| |||||||||||    
T  4033027 aattggaccaagttaaataaaaaaaataagttaa 4033060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 165 - 263
Target Start/End: Complemental strand, 6802075 - 6801977
Alignment:
Q  165 aataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatcaattaa 263  Q
    |||||||||||||||||||||||||||||||||||| |||| | ||||| ||||||||| || |||| |||||||||||||||||  ||||||||||||    
T  6802075 aataaaagaaataagttaagggacgtgtttgagaaaattaagacttatgagaccaaattaaaaaaaagaaataagttaagggaccagcagatcaattaa 6801977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 176 - 271
Target Start/End: Original strand, 35952464 - 35952559
Alignment:
Q  176 taagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatcaattaagccaaaaa 271  Q
    |||||||||||||| |||||| |||||||| | ||||| ||||||||||||||||| ||||||||||| |||| ||||||||| ||||||| ||||    
T  35952464 taagttaagggacgcgtttgacaaagttaagatttatgagaccaaattgaataaaagaaataagttaaaggactgacagatcagttaagcctaaaa 35952559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 52 - 162
Target Start/End: Complemental strand, 42962232 - 42962122
Alignment:
Q  52 gaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaaaa 151  Q
    |||||||||||   ||||||||||||||||||||| || | || |||||||||||| | ||||||||||||  ||||| ||||| |||||||||  ||||    
T  42962232 gaagaaagtaatataattaggtgttggtgatacaccattagatcttatagacctcctttatccaacggtcttctttttgagaggtttaaaattaataaaa 42962133  T
Q  152 ttgaaccaaat 162  Q
    | | |||||||    
T  42962132 taggaccaaat 42962122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 214 - 271
Target Start/End: Complemental strand, 4031933 - 4031876
Alignment:
Q  214 ggaccaaattgaataaaataaataagttaagggaccgacagatcaattaagccaaaaa 271  Q
    |||| ||||||||||||| |||||||||||| ||||| ||||||||||||||||||||    
T  4031933 ggactaaattgaataaaagaaataagttaagtgaccggcagatcaattaagccaaaaa 4031876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 178 - 265
Target Start/End: Complemental strand, 25001730 - 25001643
Alignment:
Q  178 agttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatcaattaagc 265  Q
    |||| ||||||  ||||| ||||||||| | |||||  | |||||||||||||| ||||||||||| ||||||||| |||||||||||    
T  25001730 agttgagggaccagtttgcgaaagttaagacttatgaaatcaaattgaataaaagaaataagttaaaggaccgacatatcaattaagc 25001643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 96 - 184
Target Start/End: Original strand, 3944662 - 3944750
Alignment:
Q  96 ttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaaaattgaaccaaatggaataaaagaaataagttaag 184  Q
    |||||||| |||||||||||| |||| | |||||||  | ||||||||||| ||||||| | |||||  |||||||  |||||||||||    
T  3944662 ttatagacttccgtaatccaatggtcactttttttatggtattaaaattattaaaattggatcaaattaaataaaaataataagttaag 3944750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 31 - 130
Target Start/End: Complemental strand, 14356662 - 14356562
Alignment:
Q  31 atgaagatgaggaaagggaaagaagaaagtaaa-taaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttt 129  Q
    ||||||||||||||||   | |||||||||||| ||||| ||||||||||||||||| || | || | |||||||||  | |||||| |||||| |||||    
T  14356662 atgaagatgaggaaagaagatgaagaaagtaaaataaatcaggtgttggtgatacacaattagatgtgatagacctcattcatccaatggtctctttttt 14356563  T
Q  130 t 130  Q
    |    
T  14356562 t 14356562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 144
Target Start/End: Original strand, 30674746 - 30674829
Alignment:
Q  61 aaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaatt 144  Q
    |||||||||||||||||||||||||   | | || ||| |||||||| | || |||||||||| ||||||||  ||||||||||    
T  30674746 aaataaattaggtgttggtgatacatggttagatcttacagacctcctttattcaacggtctccttttttaggagattaaaatt 30674829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 214 - 264
Target Start/End: Original strand, 4033031 - 4033081
Alignment:
Q  214 ggaccaaattgaataaaataaataagttaagggaccgacagatcaattaag 264  Q
    ||||||| || ||||||| ||||||||||| ||| ||||||||||||||||    
T  4033031 ggaccaagttaaataaaaaaaataagttaaaggatcgacagatcaattaag 4033081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 156 - 188
Target Start/End: Complemental strand, 8447127 - 8447095
Alignment:
Q  156 accaaatggaataaaagaaataagttaagggac 188  Q
    ||||||| |||||||||||||||||||||||||    
T  8447127 accaaattgaataaaagaaataagttaagggac 8447095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 150; Significance: 5e-79; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 50 - 267
Target Start/End: Complemental strand, 16602941 - 16602724
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaa 149  Q
    |||||||||||||||||||||||||||||||||||||| |||||| | |||||| ||||||||||||||||||  ||||||   ||||||||||||||||    
T  16602941 aagaagaaagtaaataaattaggtgttggtgatacactgtaaaatctgatagacatccgtaatccaacggtcttttttttttagggattaaaattatcaa 16602842  T
Q  150 aattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggacc 249  Q
    ||||| ||||| |  ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| |||||| ||||||||||    
T  16602841 aattggaccaatttaaataaaagaaataagttaagggacgtgtttgagaaagttaagacttatgggaccaaattgaataaaagaaataaattaagggacc 16602742  T
Q  250 gacagatcaattaagcca 267  Q
    ||||||||||||||||||    
T  16602741 gacagatcaattaagcca 16602724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 50 - 266
Target Start/End: Original strand, 38243857 - 38244073
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaa 149  Q
    |||||||||||||||||||| ||||||||| ||||||| |||||| ||||| ||||  |||||||||| || || ||||||||  |||||||||||||||    
T  38243857 aagaagaaagtaaataaatttggtgttggtaatacactgtaaaatcttatacacctttgtaatccaacagtatctttttttaggagattaaaattatcaa 38243956  T
Q  150 aattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggacc 249  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||| ||||||||| |||||| ||||||||||    
T  38243957 aattggaccaaattgaataaaagaaataagttaagggacgtgtttgaaaaagttaagacttatgggaccaaaatgaataaaagaaataaattaagggacc 38244056  T
Q  250 gacagatcaattaagcc 266  Q
    |||||||||||||||||    
T  38244057 gacagatcaattaagcc 38244073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 31 - 266
Target Start/End: Original strand, 27892219 - 27892454
Alignment:
Q  31 atgaagatgaggaaagggaaagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcatttttt 130  Q
    |||||||||||| |||   || || ||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||| ||||||||  ||||||    
T  27892219 atgaagatgagggaagaagaaaaaaaaagtaaataaattaggtgttggtgatacactataaaatctgatagaccttcgtaatctaacggtctgttttttt 27892318  T
Q  131 agaggattaaaattatcaaaattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaa 230  Q
        |||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||| |||||||||||| | ||||| ||||||||||||||||    
T  27892319 ttttgattaaaattatcaaaattggatcaaattgaataaaagaaataagttaagggacgtgtctgagaaagttaagacttatgagaccaaattgaataaa 27892418  T
Q  231 ataaataagttaagggaccgacagatcaattaagcc 266  Q
    | |||||||||||||||||| |||||||||||||||    
T  27892419 agaaataagttaagggaccggcagatcaattaagcc 27892454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 68 - 267
Target Start/End: Complemental strand, 23833165 - 23832967
Alignment:
Q  68 ttaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaaaattgaaccaaatggaat 167  Q
    |||||||||| |||||||||||||||| || ||||||||||||||||||||||||  |||||||| ||||||||||||||||||||| || |||| ||||    
T  23833165 ttaggtgttgatgatacactataaaatcttctagacctccgtaatccaacggtcttcttttttaggggattaaaattatcaaaattggactaaattgaat 23833066  T
Q  168 aaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatcaattaagcca 267  Q
    |||| ||| ||||||| ||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||    
T  23833065 aaaataaaaaagttaa-ggacgtgtttgagaaagttaagacttatgggaccaaatggaataaaataaataagttaagggaccgacaaatcaattaagcca 23832967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 50 - 266
Target Start/End: Complemental strand, 27891322 - 27891106
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaa 149  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| | |||||| | ||||||| ||||||||  ||||||     ||||||||||||||    
T  27891322 aagaagaaagtaaataaattaggtgttggtgatacactggaaaatctgatagacattcgtaatctaacggtctgttttttttttttattaaaattatcaa 27891223  T
Q  150 aattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggacc 249  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |  |||| ||||||||||||||||| |||||||||||||||||    
T  27891222 aattgaaccaaaatgaataaaagaaataagttaagggacgtgtttgagaaagttaagacctatgagaccaaattgaataaaagaaataagttaagggacc 27891123  T
Q  250 gacagatcaattaagcc 266  Q
    | |||||||||||||||    
T  27891122 ggcagatcaattaagcc 27891106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 89 - 264
Target Start/End: Complemental strand, 26388395 - 26388220
Alignment:
Q  89 taaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaaaattgaaccaaatggaataaaagaaataagttaagggac 188  Q
    |||||| | |||||||||||||||| ||||||||  |||| ||  ||||||||||||||||||||||| |||||  ||||||||||||||||||| ||||    
T  26388395 taaaatctgatagacctccgtaatcaaacggtctttttttatatgggattaaaattatcaaaattgaatcaaattaaataaaagaaataagttaaaggac 26388296  T
Q  189 gtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatcaattaag 264  Q
    ||||||||||||||||| | ||||| || |||||||||||||| |||||||||||| |||||||||||||||||||    
T  26388295 gtgtttgagaaagttaagacttatgagatcaaattgaataaaaaaaataagttaagagaccgacagatcaattaag 26388220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 48 - 206
Target Start/End: Complemental strand, 38243098 - 38242943
Alignment:
Q  48 gaaagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatc 147  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||| |||||   ||  |||||||||||||||| ||||||||  |||||||||||||    
T  38243098 gaaagaagaaagtaaataaatttggtgttggtgatacattataaaatcttata---ctttgtaatccaacggtctctttttttaggagattaaaattatc 38243002  T
Q  148 aaaattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaa 206  Q
    ||||||| | |||||  |||||||||||||||||||| ||| ||||||| |||||||||    
T  38243001 aaaattggatcaaattaaataaaagaaataagttaagagacatgtttgaaaaagttaaa 38242943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 156 - 266
Target Start/End: Original strand, 16604197 - 16604307
Alignment:
Q  156 accaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacaga 255  Q
    ||||||| |||||||||||||||||| ||||||||| |||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||  |||    
T  16604197 accaaattgaataaaagaaataagttcagggacgtgcttgagaaacttaagacttatgggaccaaattgaataaaagaaataagttaagggaccggtaga 16604296  T
Q  256 tcaattaagcc 266  Q
    |||||||||||    
T  16604297 tcaattaagcc 16604307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 158 - 268
Target Start/End: Complemental strand, 43814629 - 43814519
Alignment:
Q  158 caaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatc 257  Q
    ||||| |||||||||||||||||||| |||||| |||||||||||||| | ||||| ||| ||||||||||||| ||||||||||||||||||||| |||    
T  43814629 caaattgaataaaagaaataagttaaaggacgtatttgagaaagttaagacttatgagacgaaattgaataaaagaaataagttaagggaccgacaaatc 43814530  T
Q  258 aattaagccaa 268  Q
    |||||||||||    
T  43814529 aattaagccaa 43814519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 176 - 266
Target Start/End: Original strand, 23833898 - 23833988
Alignment:
Q  176 taagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatcaattaagcc 266  Q
    |||||||||||||||||||||||||||||| | |||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||    
T  23833898 taagttaagggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataagttaagggaccggcagatcaattaagcc 23833988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 178 - 268
Target Start/End: Complemental strand, 5033566 - 5033476
Alignment:
Q  178 agttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatcaattaagccaa 268  Q
    |||||||||| || |||||||||||||||| |||| |||||||||||||||||| ||||||||||| |||| |||||||| ||||||||||    
T  5033566 agttaagggatgtatttgagaaagttaaaagttataggaccaaattgaataaaagaaataagttaaaggactgacagatctattaagccaa 5033476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 5034846 - 5034934
Alignment:
Q  178 agttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatcaattaagcc 266  Q
    |||||||||| ||||||||||||||||||| |||| | |||||||| ||||||| ||||||||||| |||||| || ||||||||||||    
T  5034846 agttaagggatgtgtttgagaaagttaaaagttatagaaccaaattaaataaaagaaataagttaaaggaccggcaaatcaattaagcc 5034934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 181 - 265
Target Start/End: Original strand, 19577359 - 19577443
Alignment:
Q  181 taagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatcaattaagc 265  Q
    ||||||| || ||||  |||||||| | ||||||||||||||||| ||||| ||||||||||||||||||  |||||||||||||    
T  19577359 taagggatgtctttgttaaagttaagagttatgggaccaaattgactaaaagaaataagttaagggaccgggagatcaattaagc 19577443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 52 - 143
Target Start/End: Complemental strand, 370976 - 370885
Alignment:
Q  52 gaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaat 143  Q
    |||||||||||   ||||||||||||||||||||| || | |||| |||||||||  | |||||||||||| |||||||||||| |||||||    
T  370976 gaagaaagtaatataattaggtgttggtgatacaccattagatttgatagacctcatttatccaacggtcttattttttagaggtttaaaat 370885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 178 - 228
Target Start/End: Complemental strand, 15496133 - 15496083
Alignment:
Q  178 agttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaata 228  Q
    |||||||||||||||||| ||||||||| | ||||||||||||||||||||    
T  15496133 agttaagggacgtgtttgtgaaagttaagacttatgggaccaaattgaata 15496083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 209 - 263
Target Start/End: Original strand, 43814642 - 43814696
Alignment:
Q  209 ttatgggaccaaattgaataaaataaataagttaagggaccgacagatcaattaa 263  Q
    ||||| ||||||||||||||||| ||||| |||| ||||||||||||||||||||    
T  43814642 ttatgagaccaaattgaataaaagaaatatgttaggggaccgacagatcaattaa 43814696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 65 - 154
Target Start/End: Complemental strand, 44801073 - 44800984
Alignment:
Q  65 aaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaaaattg 154  Q
    |||| |||||||||||||||||| | |||| |  || |||||  ||||||||||||||  |||||||| ||||| |||||||||||||||    
T  44801073 aaatcaggtgttggtgatacactgtgaaatctggtaaacctctataatccaacggtcttgttttttaggggattgaaattatcaaaattg 44800984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 94
Target Start/End: Complemental strand, 5033673 - 5033631
Alignment:
Q  52 gaagaaagtaaataaattaggtgttggtgatacactataaaat 94  Q
    |||||||||||||||||||  ||||||||||||||||||||||    
T  5033673 gaagaaagtaaataaattaaatgttggtgatacactataaaat 5033631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 94
Target Start/End: Original strand, 16604092 - 16604155
Alignment:
Q  31 atgaagatgaggaaagggaaagaagaaagtaaataaattaggtgttggtgatacactataaaat 94  Q
    |||||||||||| |||   |||||||||||||||||||   ||||||||| |||||||||||||    
T  16604092 atgaagatgagggaagaagaagaagaaagtaaataaatccagtgttggtggtacactataaaat 16604155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 148; Significance: 7e-78; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 65 - 272
Target Start/End: Original strand, 35202 - 35409
Alignment:
Q  65 aaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaaaattgaaccaaatgg 164  Q
    ||||||||||||||||||||||| |||||| | |||||||||||||||||||||||||  |||||||| ||||||||||||| ||||||| ||||||| |    
T  35202 aaattaggtgttggtgatacactgtaaaatctgatagacctccgtaatccaacggtctgtttttttaggggattaaaattataaaaattggaccaaattg 35301  T
Q  165 aataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatcaattaag 264  Q
    | ||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  35302 agtaaaagaaataagttgagggacgtgtttgagaaagttaagacttatgggaccaaattgaataaaagaaataagttaagggaccgccagatcaattaag 35401  T
Q  265 ccaaaaat 272  Q
    ||||||||    
T  35402 ccaaaaat 35409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 65 - 266
Target Start/End: Complemental strand, 31234 - 31033
Alignment:
Q  65 aaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaaaattgaaccaaatgg 164  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||  |||||||| ||||||||||||| |||| || ||||||| |    
T  31234 aaattaggtgttggtgatacactataaaatctgatagacctccgtaatccaacggtctgtttttttaggggattaaaattataaaaactggaccaaattg 31135  T
Q  165 aataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatcaattaag 264  Q
    | ||||||||||||||| ||||||||||||||||||||||| | ||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  31134 agtaaaagaaataagttgagggacgtgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaagggaccggcagatcaattaag 31035  T
Q  265 cc 266  Q
    ||    
T  31034 cc 31033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 148; Significance: 7e-78; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 65 - 272
Target Start/End: Complemental strand, 79610 - 79403
Alignment:
Q  65 aaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaaaattgaaccaaatgg 164  Q
    ||||||||||||||||||||||| |||||| | |||||||||||||||||||||||||  |||||||| ||||||||||||| ||||||| ||||||| |    
T  79610 aaattaggtgttggtgatacactgtaaaatctgatagacctccgtaatccaacggtctgtttttttaggggattaaaattataaaaattggaccaaattg 79511  T
Q  165 aataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatcaattaag 264  Q
    | ||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  79510 agtaaaagaaataagttgagggacgtgtttgagaaagttaagacttatgggaccaaattgaataaaagaaataagttaagggaccgccagatcaattaag 79411  T
Q  265 ccaaaaat 272  Q
    ||||||||    
T  79410 ccaaaaat 79403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 65 - 266
Target Start/End: Original strand, 83578 - 83779
Alignment:
Q  65 aaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaaaattgaaccaaatgg 164  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||  |||||||| ||||||||||||| |||| || ||||||| |    
T  83578 aaattaggtgttggtgatacactataaaatctgatagacctccgtaatccaacggtctgtttttttaggggattaaaattataaaaactggaccaaattg 83677  T
Q  165 aataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatcaattaag 264  Q
    | ||||||||||||||| ||||||||||||||||||||||| | ||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  83678 agtaaaagaaataagttgagggacgtgtttgagaaagttaagacttatgagaccaaattgaataaaagaaataagttaagggaccggcagatcaattaag 83777  T
Q  265 cc 266  Q
    ||    
T  83778 cc 83779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878 (Bit Score: 136; Significance: 1e-70; HSPs: 3)
Name: scaffold0878
Description:

Target: scaffold0878; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 56 - 266
Target Start/End: Original strand, 2934 - 3145
Alignment:
Q  56 aaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttaga-ggattaaaattatcaaaattg 154  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||| ||||||||  ||||||    |||||||||||||||||||||    
T  2934 aaagtaaataaattaggtgttggtgatacactataaaatctgatagaccttcgtaatctaacggtctgtttttttttttggattaaaattatcaaaattg 3033  T
Q  155 aaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacag 254  Q
     ||||||| ||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||||| |||||||||||||||| | |||    
T  3034 gaccaaattgaataaaagaaataagttaagggacgtgtctgagaaagttaagacttatgggaccaaattgaataaaagaaataagttaagggactggcag 3133  T
Q  255 atcaattaagcc 266  Q
    ||||||||||||    
T  3134 atcaattaagcc 3145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 31 - 188
Target Start/End: Complemental strand, 2003 - 1847
Alignment:
Q  31 atgaagatgaggaaagggaaagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcatttttt 130  Q
    |||||||||||| |||   ||||||||||||||||||||||||||||||||||||||  ||||| | |||||| | ||||||| ||||||||   |||||    
T  2003 atgaagatgagggaagaagaagaagaaagtaaataaattaggtgttggtgatacactggaaaatctaatagacattcgtaatctaacggtctatattttt 1904  T
Q  131 agaggattaaaattatcaaaattgaaccaaatggaataaaagaaataagttaagggac 188  Q
       ||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||    
T  1903 tttggattaaaattat-aaaattggaccaaattgaataaaagaaataagttaagggac 1847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 214 - 248
Target Start/End: Complemental strand, 1881 - 1847
Alignment:
Q  214 ggaccaaattgaataaaataaataagttaagggac 248  Q
    |||||||||||||||||| ||||||||||||||||    
T  1881 ggaccaaattgaataaaagaaataagttaagggac 1847  T

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Target: scaffold1425 (Bit Score: 129; Significance: 2e-66; HSPs: 2)
Name: scaffold1425
Description:

Target: scaffold1425; HSP #1
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 50 - 266
Target Start/End: Original strand, 1503 - 1719
Alignment:
Q  50 aagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaa 149  Q
    |||||||||||||| ||||||||||||||| ||||||  |||||| | |||||||||  ||||||||||||||  |||||||  ||||||||||||||||    
T  1503 aagaagaaagtaaaaaaattaggtgttggttatacaccgtaaaatctgatagacctctataatccaacggtctgtttttttaagggattaaaattatcaa 1602  T
Q  150 aattgaaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggacc 249  Q
    ||||| ||||||| ||||||| ||||||| |||| ||||||||||||||||||||| | |||||| |||||||||||||||| |||||||||||||||||    
T  1603 aattggaccaaattgaataaaggaaataaattaaaggacgtgtttgagaaagttaagacttatggaaccaaattgaataaaagaaataagttaagggacc 1702  T
Q  250 gacagatcaattaagcc 266  Q
    | |||||||||||||||    
T  1703 ggcagatcaattaagcc 1719  T

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Target: scaffold1425; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 56 - 266
Target Start/End: Complemental strand, 343 - 134
Alignment:
Q  56 aaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaaaattga 155  Q
    |||||||| |||||||||||||||||||| || |||||| | ||||||||| |||||||||||||||| |||||||  | ||||||||||||||||||      
T  343 aaagtaaa-aaattaggtgttggtgatacgctgtaaaatctgatagacctctgtaatccaacggtctctttttttaaggaattaaaattatcaaaatttg 245  T
Q  156 accaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacaga 255  Q
    ||||||| ||||||| ||||||| |||| ||||||||||||||||||||| | |||||||| |||||||||||||| |||||||||||||||| | ||||    
T  244 accaaattgaataaaggaaataaattaaaggacgtgtttgagaaagttaagacttatgggatcaaattgaataaaagaaataagttaagggactggcaga 145  T
Q  256 tcaattaagcc 266  Q
    |||||||||||    
T  144 tcaattaagcc 134  T

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Target: scaffold0018 (Bit Score: 125; Significance: 4e-64; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 56 - 267
Target Start/End: Original strand, 25252 - 25464
Alignment:
Q  56 aaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtc-tcattttttagaggattaaaattatcaaaattg 154  Q
    |||||||||||||||||||||| | |||||||||||||| | ||| |||||||||||||||| ||| || | ||||| | ||||||||||||||||||||    
T  25252 aaagtaaataaattaggtgttgataatacactataaaatgtgataaacctccgtaatccaactgtcctcttgttttaaatgattaaaattatcaaaattg 25351  T
Q  155 aaccaaatggaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacag 254  Q
     |||||||  |||||||||||||| |||||||||||||||||||||||||| | ||||| ||||||||||||||||| ||||||||||||||| || |||    
T  25352 gaccaaatttaataaaagaaataaattaagggacgtgtttgagaaagttaagacttatgtgaccaaattgaataaaagaaataagttaagggagcggcag 25451  T
Q  255 atcaattaagcca 267  Q
    |||||||||||||    
T  25452 atcaattaagcca 25464  T

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Target: scaffold0026 (Bit Score: 83; Significance: 4e-39; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 164 - 266
Target Start/End: Complemental strand, 104403 - 104301
Alignment:
Q  164 gaataaaagaaataagttaagggacgtgtttgagaaagttaaaaattatgggaccaaattgaataaaataaataagttaagggaccgacagatcaattaa 263  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||| || |||||||||    
T  104403 gaataaaagaaataagttaagggacgtgtttgagaatgttaaaacttatgggaccaaattgaataaaagaaataagttaagggaccgtcaaatcaattaa 104304  T
Q  264 gcc 266  Q
    |||    
T  104303 gcc 104301  T

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Target: scaffold0026; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 31 - 112
Target Start/End: Complemental strand, 104486 - 104405
Alignment:
Q  31 atgaagatgaggaaagggaaagaagaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaat 112  Q
    |||||||||||| |||   |||||||||||||||||||||| |||||||||||||||||||||| | |||||||||||||||    
T  104486 atgaagatgagggaagaagaagaagaaagtaaataaattagatgttggtgatacactataaaatctgatagacctccgtaat 104405  T

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Target: scaffold0026; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 156 - 188
Target Start/End: Complemental strand, 104351 - 104319
Alignment:
Q  156 accaaatggaataaaagaaataagttaagggac 188  Q
    ||||||| |||||||||||||||||||||||||    
T  104351 accaaattgaataaaagaaataagttaagggac 104319  T

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Target: scaffold0349 (Bit Score: 71; Significance: 6e-32; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 60 - 154
Target Start/End: Complemental strand, 9363 - 9270
Alignment:
Q  60 taaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaattatcaaaattg 154  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||    
T  9363 taaataaattaggtgttggtgatacactataaaatctgatagacctccgtaatccaacggtctc-ttttttaggggattaaaatcatcaaaattg 9270  T

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Target: scaffold0035 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 31 - 144
Target Start/End: Original strand, 22351 - 22465
Alignment:
Q  31 atgaagatgaggaaagggaaaga-agaaagtaaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttt 129  Q
    |||||||||||||||  |||||| | |||||||| |||||| |||||| ||||||||  | | || || ||||||| | | |||| |||||||  |||||    
T  22351 atgaagatgaggaaaaagaaagagaaaaagtaaaaaaattatgtgttgatgatacaccgttagatcttgtagaccttctttatccgacggtcttcttttt 22450  T
Q  130 tagaggattaaaatt 144  Q
    || ||||||||||||    
T  22451 tataggattaaaatt 22465  T

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Target: scaffold0081 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 144
Target Start/End: Original strand, 42923 - 43003
Alignment:
Q  61 aaataaattaggtgttggtgatacactataaaattttatagacctccgtaatccaacggtctcattttttagaggattaaaatt 144  Q
    ||||||||||||||||||||||||||| | |||| | || |||||   | |||||||||||||  ||||  |||||||||||||    
T  42923 aaataaattaggtgttggtgatacactgttaaatctcatggacct---ttatccaacggtctccattttcggaggattaaaatt 43003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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