View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19343_high_4 (Length: 271)
Name: NF19343_high_4
Description: NF19343
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19343_high_4 |
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Alignment Details
Target: chr1 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 28240971 - 28241205
Alignment:
| Q |
1 |
tagagtctagagatgcaaatggttgtttcctctattcaagcagaactctgggttattgcttgctgtcagtgtcattaacaattgatgtgttcagtcccac |
100 |
Q |
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| T |
28240971 |
tagagtctagagatgcaaatggttgtttcctctattcaagcagaactctgggttattgcttgctgtcagtgtcattaacaattgatgtgttcagtcccac |
28241070 |
T |
|
| Q |
101 |
gattgatttgggattgttcaaagaattgaagagaggacaaaaagttttgatacctctcatattaactatgttcttagagaggctgacgaaattgcagata |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28241071 |
gattgatttgggattgttcaaagaattgaagagaggacaaaaagttctgatacctctcatattaactatgttcttagagaggctgacgaaattgcagata |
28241170 |
T |
|
| Q |
201 |
gtcttgcaaagtttggcctttctctaacttgtaga |
235 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
28241171 |
gtcttgcaaagtttggcctttctctaacttgtaga |
28241205 |
T |
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