View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19343_low_3 (Length: 357)

Name: NF19343_low_3
Description: NF19343
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19343_low_3
NF19343_low_3
[»] chr1 (21 HSPs)
chr1 (18-343)||(44927939-44928264)
chr1 (76-129)||(44936415-44936468)
chr1 (223-276)||(23373266-23373319)
chr1 (201-294)||(29723535-29723628)
chr1 (204-293)||(31517674-31517763)
chr1 (76-129)||(45989794-45989847)
chr1 (199-293)||(15581301-15581395)
chr1 (290-343)||(44936645-44936698)
chr1 (204-247)||(14737660-14737703)
chr1 (301-343)||(15360856-15360898)
chr1 (301-343)||(29793744-29793786)
chr1 (204-294)||(32515375-32515465)
chr1 (301-343)||(45999354-45999396)
chr1 (302-343)||(4200191-4200232)
chr1 (212-289)||(15579533-15579610)
chr1 (204-293)||(37593618-37593707)
chr1 (206-270)||(4118807-4118871)
chr1 (204-276)||(4549475-4549547)
chr1 (204-276)||(24279813-24279885)
chr1 (224-276)||(40485727-40485779)
chr1 (224-276)||(43338180-43338232)
[»] chr3 (9 HSPs)
chr3 (204-294)||(37273180-37273270)
chr3 (204-257)||(36189712-36189765)
chr3 (204-293)||(45541618-45541707)
chr3 (202-273)||(2620853-2620924)
chr3 (224-293)||(43115103-43115172)
chr3 (204-296)||(24603686-24603778)
chr3 (204-256)||(25459564-25459616)
chr3 (224-291)||(2923527-2923594)
chr3 (204-275)||(11253566-11253637)
[»] chr5 (9 HSPs)
chr5 (204-276)||(32172717-32172789)
chr5 (204-270)||(14599306-14599372)
chr5 (303-343)||(29116998-29117038)
chr5 (301-345)||(36539706-36539750)
chr5 (241-292)||(38766516-38766567)
chr5 (301-343)||(14295468-14295510)
chr5 (208-293)||(34117486-34117570)
chr5 (253-293)||(10272414-10272454)
chr5 (291-343)||(42569036-42569088)
[»] chr7 (6 HSPs)
chr7 (183-293)||(48157032-48157143)
chr7 (224-291)||(36537957-36538024)
chr7 (301-343)||(21453256-21453298)
chr7 (204-257)||(2825170-2825223)
chr7 (204-276)||(10079273-10079345)
chr7 (205-293)||(24967108-24967196)
[»] chr2 (10 HSPs)
chr2 (206-292)||(9878618-9878704)
chr2 (224-293)||(44606064-44606133)
chr2 (204-294)||(9996784-9996874)
chr2 (204-293)||(32821856-32821945)
chr2 (204-279)||(4661321-4661396)
chr2 (206-257)||(34927046-34927097)
chr2 (308-345)||(13630354-13630391)
chr2 (204-276)||(15780141-15780213)
chr2 (253-293)||(30538156-30538196)
chr2 (301-345)||(33942110-33942154)
[»] chr6 (10 HSPs)
chr6 (208-293)||(32976025-32976110)
chr6 (204-279)||(2455871-2455946)
chr6 (204-294)||(2460085-2460175)
chr6 (230-293)||(34939560-34939623)
chr6 (301-343)||(3785766-3785808)
chr6 (204-245)||(33080512-33080553)
chr6 (301-345)||(9093622-9093666)
chr6 (305-345)||(20671935-20671975)
chr6 (224-276)||(24973981-24974033)
chr6 (208-276)||(32917261-32917329)
[»] chr4 (10 HSPs)
chr4 (204-294)||(27123286-27123376)
chr4 (204-294)||(46019563-46019653)
chr4 (204-257)||(25487491-25487544)
chr4 (224-275)||(21157833-21157884)
chr4 (230-276)||(12816999-12817045)
chr4 (301-343)||(54325103-54325145)
chr4 (204-257)||(19429404-19429457)
chr4 (224-273)||(25717660-25717709)
chr4 (204-245)||(46797109-46797150)
chr4 (204-248)||(4663679-4663723)
[»] chr8 (6 HSPs)
chr8 (224-293)||(4560549-4560618)
chr8 (209-293)||(4511075-4511159)
chr8 (197-276)||(30191068-30191147)
chr8 (204-258)||(31884874-31884928)
chr8 (302-343)||(3537098-3537139)
chr8 (200-257)||(24326114-24326171)


Alignment Details
Target: chr1 (Bit Score: 318; Significance: 1e-179; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 18 - 343
Target Start/End: Original strand, 44927939 - 44928264
Alignment:
Q  18 ggaggcagaagttgaaaaatcagaagatgtttccaatactggagatgaagaaaaaagtgatcaagtgattgccctcaggcctctaaacatggaagacatg 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44927939 ggaggcagaagttgaaaaatcagaagatgtttccaatactggagatgaagaaaaaagtgatcaagtgattgccctcaggcctctaaacatggaagacatg 44928038  T
Q  118 agacaggcaaaggaaaaggtatatttgactttaaacactattcatgtcatttgctgtaacgttaggggcttgtttatattaagctaatttgagcttattt 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44928039 agacaggcaaaggaaaaggtatatttgactttaaacactattcatgtcatttgctgtaacgttaggggcttgtttatattaagctaatttgagcttattt 44928138  T
Q  218 actagtataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatgcccgtaagttgttttcaagacatattatagcttatacgaaa 317  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  44928139 actagtataagcacttgtaagattgtttggaagaacttatagaaacaacttatgacatgcccgtaagttgttttcaagacatattatagcttatatgaaa 44928238  T
Q  318 acagcttgactttatcttatcttttg 343  Q
    ||||||||||||||||||||||||||    
T  44928239 acagcttgactttatcttatcttttg 44928264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 76 - 129
Target Start/End: Original strand, 44936415 - 44936468
Alignment:
Q  76 gatcaagtgattgccctcaggcctctaaacatggaagacatgagacaggcaaag 129  Q
    |||||||||||||||||||||||| |||||||||| ||||||||| ||||||||    
T  44936415 gatcaagtgattgccctcaggcctttaaacatggaggacatgagagaggcaaag 44936468  T

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Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 276
Target Start/End: Original strand, 23373266 - 23373319
Alignment:
Q  223 tataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatg 276  Q
    ||||||||||||| ||||||||||| ||| |||||||| |||||||||||||||    
T  23373266 tataagcacttgtgagattgtttgggagagcttatagaaacaacttatgacatg 23373319  T

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Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 294
Target Start/End: Complemental strand, 29723628 - 29723535
Alignment:
Q  201 ctaatttgagcttatttactagtataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatgcccgtaagttgttttcaa 294  Q
    |||||||||||||||||||||| |||||||||||| | |  ||||| ||||||| || || ||| ||||||||||| || |||  |||||||||    
T  29723628 ctaatttgagcttatttactagcataagcacttgtgatacagtttgaaagaactaatggaaacagcttatgacatgtccataaactgttttcaa 29723535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 293
Target Start/End: Original strand, 31517674 - 31517763
Alignment:
Q  204 atttgagcttatttactagtataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatgcccgtaagttgttttca 293  Q
    ||||||||||||||||| | |||||||||||| ||| ||||||| |||||||||  | |||||| ||||||||  | |||| ||||||||    
T  31517674 atttgagcttatttactggcataagcacttgtgagactgtttgggagaacttatcaaaacaactcatgacatgttcataagctgttttca 31517763  T

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Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 129
Target Start/End: Original strand, 45989794 - 45989847
Alignment:
Q  76 gatcaagtgattgccctcaggcctctaaacatggaagacatgagacaggcaaag 129  Q
    |||||||||||| ||||| ||||| | |||||||||||||||||||||||||||    
T  45989794 gatcaagtgatttccctccggcctttgaacatggaagacatgagacaggcaaag 45989847  T

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Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 293
Target Start/End: Complemental strand, 15581395 - 15581301
Alignment:
Q  199 agctaatttgagcttatttactagtataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatgcccgtaagttgttttca 293  Q
    |||| |||| ||||||| ||||   |||||||||||| ||||||||||||||| || || || ||||||||||||||| |  |||| ||||||||    
T  15581395 agcttattttagcttatctactgacataagcacttgtgagattgtttggaagagctaatggaaacaacttatgacatgtctataagctgttttca 15581301  T

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Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 290 - 343
Target Start/End: Original strand, 44936645 - 44936698
Alignment:
Q  290 ttcaagacatattatagcttatacgaaaacagcttgactttatcttatcttttg 343  Q
    ||||||| | ||||||||||||| ||||| || |||||||||||||||||||||    
T  44936645 ttcaagatagattatagcttatatgaaaatagtttgactttatcttatcttttg 44936698  T

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Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 204 - 247
Target Start/End: Original strand, 14737660 - 14737703
Alignment:
Q  204 atttgagcttatttactagtataagcacttgtaagattgtttgg 247  Q
    ||||||||||||||||||| |||||||||||| ||| |||||||    
T  14737660 atttgagcttatttactagaataagcacttgtgagactgtttgg 14737703  T

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Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 343
Target Start/End: Complemental strand, 15360898 - 15360856
Alignment:
Q  301 ttatagcttatacgaaaacagcttgactttatcttatcttttg 343  Q
    |||||||||||| |||||||| |||||||||| ||||||||||    
T  15360898 ttatagcttatatgaaaacagtttgactttattttatcttttg 15360856  T

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Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 343
Target Start/End: Complemental strand, 29793786 - 29793744
Alignment:
Q  301 ttatagcttatacgaaaacagcttgactttatcttatcttttg 343  Q
    |||||||||||||||||||| ||| ||||||| ||||||||||    
T  29793786 ttatagcttatacgaaaacaacttaactttatgttatcttttg 29793744  T

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Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 294
Target Start/End: Original strand, 32515375 - 32515465
Alignment:
Q  204 atttgagcttatttactagtataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatgcccgtaagttgttttcaa 294  Q
    ||||||| |||| |||||  |||||||||||| ||| ||||||| ||| ||||| || ||| | ||||||||| |  ||||||||||||||    
T  32515375 atttgagtttatctactaacataagcacttgtgagactgtttgggagagcttatggaaacagcgtatgacatgtcaataagttgttttcaa 32515465  T

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Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 343
Target Start/End: Original strand, 45999354 - 45999396
Alignment:
Q  301 ttatagcttatacgaaaacagcttgactttatcttatcttttg 343  Q
    |||||||||||| |||| ||| |||||||||||||||||||||    
T  45999354 ttatagcttatatgaaagcagtttgactttatcttatcttttg 45999396  T

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Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 343
Target Start/End: Complemental strand, 4200232 - 4200191
Alignment:
Q  302 tatagcttatacgaaaacagcttgactttatcttatcttttg 343  Q
    ||||||||||| ||||||| ||||||||||| ||||||||||    
T  4200232 tatagcttatatgaaaacaacttgactttattttatcttttg 4200191  T

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Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 289
Target Start/End: Complemental strand, 15579610 - 15579533
Alignment:
Q  212 ttatttactagtataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatgcccgtaagttgtt 289  Q
    |||| |||||| ||||| ||||| |||| ||||||| ||| ||| | || ||||||||||||||| || |||||||||    
T  15579610 ttatctactagcataagaacttgcaagactgtttgggagagcttgtggaaacaacttatgacatgtccataagttgtt 15579533  T

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Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 293
Target Start/End: Original strand, 37593618 - 37593707
Alignment:
Q  204 atttgagcttatttactagtataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatgcccgtaagttgttttca 293  Q
    |||||||||||| |||| | |||| ||||||| ||| ||||||| | |||| ||  |||||||||||||||||  | |||| ||||||||    
T  37593618 atttgagcttatatactggcataaacacttgttagactgtttgggaaaactaatgaacacaacttatgacatgttcataagctgttttca 37593707  T

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Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 270
Target Start/End: Original strand, 4118807 - 4118871
Alignment:
Q  206 ttgagcttatttactagtataagcacttgtaagattgtttggaagaacttatagacacaacttat 270  Q
    |||||||||| ||||||||||| ||||| | ||| | |||| |||| |||||||| |||||||||    
T  4118807 ttgagcttatctactagtataaacacttttgagactctttgaaagagcttatagaaacaacttat 4118871  T

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Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 276
Target Start/End: Original strand, 4549475 - 4549547
Alignment:
Q  204 atttgagcttatttactagtataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatg 276  Q
    ||||||| |||| |||| | ||||||| || | ||| ||||||| ||| |||||||| |||||||||||||||    
T  4549475 atttgagattatctactggcataagcatttctgagactgtttgggagagcttatagaaacaacttatgacatg 4549547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 276
Target Start/End: Complemental strand, 24279885 - 24279813
Alignment:
Q  204 atttgagcttatttactagtataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatg 276  Q
    |||||| |||||||||||| |||| ||||||| ||| || ||||  |||| ||| || |||||||||||||||    
T  24279885 atttgaacttatttactagcataaacacttgtgagactgattgggggaacctatggaaacaacttatgacatg 24279813  T

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Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 224 - 276
Target Start/End: Original strand, 40485727 - 40485779
Alignment:
Q  224 ataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatg 276  Q
    |||||||||||| ||| ||||||| ||||||||| || ||| |||||||||||    
T  40485727 ataagcacttgtgagactgtttgggagaacttattgaaacatcttatgacatg 40485779  T

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Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 224 - 276
Target Start/End: Complemental strand, 43338232 - 43338180
Alignment:
Q  224 ataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatg 276  Q
    ||||||| |||||||||| ||| ||||||||||| || ||| |||||||||||    
T  43338232 ataagcatttgtaagattatttagaagaacttatggaaacagcttatgacatg 43338180  T

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Target: chr3 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 294
Target Start/End: Complemental strand, 37273270 - 37273180
Alignment:
Q  204 atttgagcttatttactagtataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatgcccgtaagttgttttcaa 294  Q
    |||||| |||||||| ||| ||||||||| || ||| ||||||| ||| ||||| || ||||||||||||||| || ||||||||||||||    
T  37273270 atttgaacttatttattagcataagcactggtgagactgtttgggagagcttatggaaacaacttatgacatgtccataagttgttttcaa 37273180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 204 - 257
Target Start/End: Complemental strand, 36189765 - 36189712
Alignment:
Q  204 atttgagcttatttactagtataagcacttgtaagattgtttggaagaacttat 257  Q
    |||||||||||||||||||||||||||||||| ||| |||||||| ||||||||    
T  36189765 atttgagcttatttactagtataagcacttgtgagactgtttggaggaacttat 36189712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 293
Target Start/End: Complemental strand, 45541707 - 45541618
Alignment:
Q  204 atttgagcttatttactagtataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatgcccgtaagttgttttca 293  Q
    ||||||||||||||| | |||||| ||||||||||| ||||| |||||||||||  | ||| |||||||||||  | |||| ||||||||    
T  45541707 atttgagcttatttaatggtataaacacttgtaagactgtttagaagaacttatgaaaacagcttatgacatgttcataagctgttttca 45541618  T

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Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 273
Target Start/End: Original strand, 2620853 - 2620924
Alignment:
Q  202 taatttgagcttatttactagtataagcacttgtaagattgtttggaagaacttatagacacaacttatgac 273  Q
    ||||||||||||||||||||||||||| |||| ||| ||||||||| |||| ||| ||| ||  ||||||||    
T  2620853 taatttgagcttatttactagtataagaacttttaatattgtttgggagaatttacagaaactgcttatgac 2620924  T

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Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 224 - 293
Target Start/End: Complemental strand, 43115172 - 43115103
Alignment:
Q  224 ataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatgcccgtaagttgttttca 293  Q
    |||| ||||||| |||||||||||||||  |||| || ||||||||||||||| || ||| |||||||||    
T  43115172 ataatcacttgtgagattgtttggaagagtttatggaaacaacttatgacatgtccataacttgttttca 43115103  T

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Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 296
Target Start/End: Original strand, 24603686 - 24603778
Alignment:
Q  204 atttgagcttatttactagtataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatgcccgtaagttgttttcaaga 296  Q
    ||||||| || | |||||| |||||||| | | ||| ||||||| ||||||||| || |||  ||||||||||||| |||| |||||||||||    
T  24603686 atttgaggttttctactagcataagcacctctgagactgtttgggagaacttattgaaacagtttatgacatgcccataagctgttttcaaga 24603778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 256
Target Start/End: Original strand, 25459564 - 25459616
Alignment:
Q  204 atttgagcttatttactagtataagcacttgtaagattgtttggaagaactta 256  Q
    ||||||||||||  ||||| |||||||||||| ||||||||||||||| ||||    
T  25459564 atttgagcttatcaactagcataagcacttgtgagattgtttggaagagctta 25459616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 224 - 291
Target Start/End: Complemental strand, 2923594 - 2923527
Alignment:
Q  224 ataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatgcccgtaagttgtttt 291  Q
    ||||| ||||| |||| |||||||||||||||||||| ||||||||  ||||| || |||||| ||||    
T  2923594 ataagtacttgaaagactgtttggaagaacttatagaaacaacttactacatgtccataagttatttt 2923527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 204 - 275
Target Start/End: Complemental strand, 11253637 - 11253566
Alignment:
Q  204 atttgagcttatttactagtataagcacttgtaagattgtttggaagaacttatagacacaacttatgacat 275  Q
    ||||||| |||| |||||| |||||||||||  ||| ||||||| |||| ||||| | ||||||||||||||    
T  11253637 atttgagattatctactagcataagcacttgagagactgtttggcagaatttataaaaacaacttatgacat 11253566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 204 - 276
Target Start/End: Complemental strand, 32172789 - 32172717
Alignment:
Q  204 atttgagcttatttactagtataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatg 276  Q
    |||||||||||| |||||| |||||||||||| |||| |||||| ||| ||||| || |||||||||||||||    
T  32172789 atttgagcttatatactagcataagcacttgtgagatagtttgggagagcttatggaaacaacttatgacatg 32172717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 270
Target Start/End: Original strand, 14599306 - 14599372
Alignment:
Q  204 atttgagcttatttactagtataagcacttgtaagattgtttggaagaacttatagacacaacttat 270  Q
    |||||| |||||||||||| |||| ||||||||||||||||||  ||| ||||| || |||||||||    
T  14599306 atttgaacttatttactagcataaacacttgtaagattgtttgagagagcttatcgaaacaacttat 14599372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 303 - 343
Target Start/End: Original strand, 29116998 - 29117038
Alignment:
Q  303 atagcttatacgaaaacagcttgactttatcttatcttttg 343  Q
    ||||||||||||||||||| |||||||||| ||||||||||    
T  29116998 atagcttatacgaaaacagtttgactttattttatcttttg 29117038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 345
Target Start/End: Complemental strand, 36539750 - 36539706
Alignment:
Q  301 ttatagcttatacgaaaacagcttgactttatcttatcttttgat 345  Q
    |||||||||||| |||||||| |||||||||| ||||||||||||    
T  36539750 ttatagcttatatgaaaacaggttgactttattttatcttttgat 36539706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 292
Target Start/End: Original strand, 38766516 - 38766567
Alignment:
Q  241 tgtttggaagaacttatagacacaacttatgacatgcccgtaagttgttttc 292  Q
    ||||||||||||||||| || ||||||||||||| | || ||||||||||||    
T  38766516 tgtttggaagaacttatggaaacaacttatgacacgtccataagttgttttc 38766567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 343
Target Start/End: Complemental strand, 14295510 - 14295468
Alignment:
Q  301 ttatagcttatacgaaaacagcttgactttatcttatcttttg 343  Q
    |||||||||||| |||||||| |||||||||| ||||||||||    
T  14295510 ttatagcttatatgaaaacagtttgactttattttatcttttg 14295468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 293
Target Start/End: Original strand, 34117486 - 34117570
Alignment:
Q  208 gagcttatttactagtataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatgcccgtaagttgttttca 293  Q
    |||||||| |||| | |||| ||||||| ||| ||| |||| || ||||| || |||||||||||||||||| |||| ||||||||    
T  34117486 gagcttatctactggcataaacacttgttagactgtctgga-gagcttatggagacaacttatgacatgcccataagctgttttca 34117570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 293
Target Start/End: Original strand, 10272414 - 10272454
Alignment:
Q  253 cttatagacacaacttatgacatgcccgtaagttgttttca 293  Q
    |||||||| ||||||||||||||| | ||||||||||||||    
T  10272414 cttatagaaacaacttatgacatgtctgtaagttgttttca 10272454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 343
Target Start/End: Original strand, 42569036 - 42569088
Alignment:
Q  291 tcaagacatattatagcttatacgaaaacagcttgactttatcttatcttttg 343  Q
    |||| ||| |||||||||||||||||||||  | |||||||| ||||||||||    
T  42569036 tcaaaacagattatagcttatacgaaaacaattagactttattttatcttttg 42569088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 293
Target Start/End: Original strand, 48157032 - 48157143
Alignment:
Q  183 gggcttgtttatattaag-ctaatttgagcttatttactagtataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatgcccgt 281  Q
    ||||||||||  |||||| || |||||||||||||||||  | |||||| |||| ||| ||||||| ||| |||||||| |||||||||| |||| || |    
T  48157032 gggcttgtttggattaagacttatttgagcttatttactgatttaagcatttgtgagactgtttgggagagcttatagaaacaacttatgccatgtccat 48157131  T
Q  282 aagttgttttca 293  Q
    ||| ||||||||    
T  48157132 aagctgttttca 48157143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 224 - 291
Target Start/End: Complemental strand, 36538024 - 36537957
Alignment:
Q  224 ataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatgcccgtaagttgtttt 291  Q
    |||| ||||||| ||||||||||  ||||||||| || |||||||||||||||  | |||||||||||    
T  36538024 ataaacacttgtgagattgtttgagagaacttatggaaacaacttatgacatgttcataagttgtttt 36537957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 343
Target Start/End: Complemental strand, 21453298 - 21453256
Alignment:
Q  301 ttatagcttatacgaaaacagcttgactttatcttatcttttg 343  Q
    |||||||||||| || |||| ||||||||||||||||||||||    
T  21453298 ttatagcttatatgagaacaacttgactttatcttatcttttg 21453256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 257
Target Start/End: Original strand, 2825170 - 2825223
Alignment:
Q  204 atttgagcttatttactagtataagcacttgtaagattgtttggaagaacttat 257  Q
    |||||||||||| ||||  ||||||||||||| ||| | |||||||||||||||    
T  2825170 atttgagcttatctacttatataagcacttgtgagactctttggaagaacttat 2825223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 276
Target Start/End: Original strand, 10079273 - 10079345
Alignment:
Q  204 atttgagcttatttactagtataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatg 276  Q
    |||||||||||||||| || |||| ||||| | || |||||||| ||| |||||||| ||| || ||||||||    
T  10079273 atttgagcttatttacgagcataaacacttatgaggttgtttgggagagcttatagaaacagctgatgacatg 10079345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 293
Target Start/End: Complemental strand, 24967196 - 24967108
Alignment:
Q  205 tttgagcttatttactagtataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatgcccgtaagttgttttca 293  Q
    ||||||||||| ||||||||||| || || | ||| |||||||||||  |||| || ||||||||| ||||  ||  ||||||||||||    
T  24967196 tttgagcttatctactagtataaacatttatgagactgtttggaagagattatggaaacaacttataacatatccagaagttgttttca 24967108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 206 - 292
Target Start/End: Original strand, 9878618 - 9878704
Alignment:
Q  206 ttgagcttatttactagtataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatgcccgtaagttgttttc 292  Q
    |||||||||||||||||  ||||||||| | ||| |||  |||||| ||||| || ||||||||||||||| || ||||||||||||    
T  9878618 ttgagcttatttactagcttaagcacttctgagactgtagggaagagcttatggaaacaacttatgacatgtccataagttgttttc 9878704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 224 - 293
Target Start/End: Original strand, 44606064 - 44606133
Alignment:
Q  224 ataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatgcccgtaagttgttttca 293  Q
    ||||| ||||||| || |||||||||||||||||  | ||||||||||||||| || |||||||||||||    
T  44606064 ataagtacttgtacgactgtttggaagaacttatgaaaacaacttatgacatgtccataagttgttttca 44606133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 294
Target Start/End: Complemental strand, 9996874 - 9996784
Alignment:
Q  204 atttgagcttatttactagtataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatgcccgtaagttgttttcaa 294  Q
    ||||||||||||  ||||| ||||| |||||| ||| || |||| ||| |||||||| |||||||||||||| ||| ||| ||||| ||||    
T  9996874 atttgagcttatcaactagcataagtacttgtgagactgcttgggagagcttatagaaacaacttatgacatacccataaattgttctcaa 9996784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 204 - 293
Target Start/End: Complemental strand, 32821945 - 32821856
Alignment:
Q  204 atttgagcttatttactagtataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatgcccgtaagttgttttca 293  Q
    |||||||||||| ||| |   |||||| ||| |||| |||||||||||  ||||||| ||||||||||||||| || |||| ||||||||    
T  32821945 atttgagcttatctaccaacgtaagcatttgcaagactgtttggaagagtttatagaaacaacttatgacatgtccataagctgttttca 32821856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 204 - 279
Target Start/End: Complemental strand, 4661396 - 4661321
Alignment:
Q  204 atttgagcttatttactagtataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatgccc 279  Q
    ||||||| |||| ||||  ||||| | |||||||||||||||  |||||||||| ||  |||||||||||||||||    
T  4661396 atttgagtttatctactcatataaactcttgtaagattgtttcaaagaacttatggaagcaacttatgacatgccc 4661321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 206 - 257
Target Start/End: Complemental strand, 34927097 - 34927046
Alignment:
Q  206 ttgagcttatttactagtataagcacttgtaagattgtttggaagaacttat 257  Q
    |||||||||||||||   |||||||||| ||||| |||||||||||||||||    
T  34927097 ttgagcttatttactgacataagcacttataagactgtttggaagaacttat 34927046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 345
Target Start/End: Original strand, 13630354 - 13630391
Alignment:
Q  308 ttatacgaaaacagcttgactttatcttatcttttgat 345  Q
    ||||| |||||||| |||||||||||||||||||||||    
T  13630354 ttatatgaaaacagtttgactttatcttatcttttgat 13630391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 276
Target Start/End: Complemental strand, 15780213 - 15780141
Alignment:
Q  204 atttgagcttatttactagtataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatg 276  Q
    ||||||||||||  ||||| |||| | |||||||||||||||| |||| || ||||| |||| | ||||||||    
T  15780213 atttgagcttatcgactagcataaccccttgtaagattgtttgaaagatctcatagaaacaattaatgacatg 15780141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 293
Target Start/End: Original strand, 30538156 - 30538196
Alignment:
Q  253 cttatagacacaacttatgacatgcccgtaagttgttttca 293  Q
    |||||||| ||||||||||||||| || |||||||||||||    
T  30538156 cttatagaaacaacttatgacatgtccataagttgttttca 30538196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 345
Target Start/End: Complemental strand, 33942154 - 33942110
Alignment:
Q  301 ttatagcttatacgaaaacagcttgactttatcttatcttttgat 345  Q
    |||||||||| | |||||||| |||||||||| ||||||||||||    
T  33942154 ttatagcttacatgaaaacagtttgactttattttatcttttgat 33942110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000002; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 293
Target Start/End: Complemental strand, 32976110 - 32976025
Alignment:
Q  208 gagcttatttactagtataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatgcccgtaagttgttttca 293  Q
    ||||||||||||| | ||||| |||||| ||| ||||||||||| |||||||| ||| ||||||||||  || |||| ||||||||    
T  32976110 gagcttatttactggcataagtacttgtgagactgtttggaagagcttatagaaacagcttatgacatttccataagctgttttca 32976025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 204 - 279
Target Start/End: Complemental strand, 2455946 - 2455871
Alignment:
Q  204 atttgagcttatttactagtataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatgccc 279  Q
    |||||||||||| |||  | |||||||||||  ||||||||| ||||| ||||| || ||||||||||||||||||    
T  2455946 atttgagcttatctaccggcataagcacttgcgagattgtttagaagagcttatggaaacaacttatgacatgccc 2455871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 294
Target Start/End: Original strand, 2460085 - 2460175
Alignment:
Q  204 atttgagcttatttactagtataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatgcccgtaagttgttttcaa 294  Q
    ||||||||||||  ||||| ||||| |||||| ||| ||||||  ||| ||||| || ||||||||||||||| |  ||||||||||||||    
T  2460085 atttgagcttataaactagcataagtacttgtgagactgtttgagagagcttatggaaacaacttatgacatgtctttaagttgttttcaa 2460175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 230 - 293
Target Start/End: Complemental strand, 34939623 - 34939560
Alignment:
Q  230 acttgtaagattgtttggaagaacttatagacacaacttatgacatgcccgtaagttgttttca 293  Q
    |||||||| ||||||||  ||| ||||| || ||||||||||||| | ||||||||||||||||    
T  34939623 acttgtaaaattgtttgagagagcttatggaaacaacttatgacacgtccgtaagttgttttca 34939560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 343
Target Start/End: Original strand, 3785766 - 3785808
Alignment:
Q  301 ttatagcttatacgaaaacagcttgactttatcttatcttttg 343  Q
    ||||||||||||||||||||| || ||||||| ||||||||||    
T  3785766 ttatagcttatacgaaaacagtttaactttattttatcttttg 3785808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 245
Target Start/End: Original strand, 33080512 - 33080553
Alignment:
Q  204 atttgagcttatttactagtataagcacttgtaagattgttt 245  Q
    ||||||||||||||||| | |||||||||||| |||||||||    
T  33080512 atttgagcttatttactggcataagcacttgtgagattgttt 33080553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 345
Target Start/End: Original strand, 9093622 - 9093666
Alignment:
Q  301 ttatagcttatacgaaaacagcttgactttatcttatcttttgat 345  Q
    ||||||||||||||||||||  || ||||||| ||||||||||||    
T  9093622 ttatagcttatacgaaaacaatttaactttattttatcttttgat 9093666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 345
Target Start/End: Original strand, 20671935 - 20671975
Alignment:
Q  305 agcttatacgaaaacagcttgactttatcttatcttttgat 345  Q
    ||||||||||||||||  |||||||||| ||||||||||||    
T  20671935 agcttatacgaaaacaatttgactttattttatcttttgat 20671975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 224 - 276
Target Start/End: Original strand, 24973981 - 24974033
Alignment:
Q  224 ataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatg 276  Q
    |||||||||||||||||||||||| ||| |||||||  | ||||||| |||||    
T  24973981 ataagcacttgtaagattgtttggtagagcttataggaataacttataacatg 24974033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 208 - 276
Target Start/End: Complemental strand, 32917329 - 32917261
Alignment:
Q  208 gagcttatttactagtataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatg 276  Q
    |||||||  |||||| |||| ||||||| ||| ||||||| ||| ||||| || |||||||||||||||    
T  32917329 gagcttacctactagaataaacacttgtgagactgtttgggagagcttatggaaacaacttatgacatg 32917261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 35; Significance: 0.0000000001; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 294
Target Start/End: Original strand, 27123286 - 27123376
Alignment:
Q  204 atttgagcttatttactagtataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatgcccgtaagttgttttcaa 294  Q
    ||||||||||||  ||||| ||||| |||||| ||| ||||||  ||| ||||| || ||||||||||||||| |  ||||||||||||||    
T  27123286 atttgagcttataaactagcataagtacttgtgagactgtttgagagagcttatggaaacaacttatgacatgtctttaagttgttttcaa 27123376  T

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Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 294
Target Start/End: Original strand, 46019563 - 46019653
Alignment:
Q  204 atttgagcttatttactagtataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatgcccgtaagttgttttcaa 294  Q
    |||||||||||| |||||||||||  |||||| ||||||| || ||||  ||||| ||| |||||||||||||    ||||||||||||||    
T  46019563 atttgagcttatgtactagtataaaaacttgtgagattgtctgaaagagtttataaacagaacttatgacatgttgataagttgttttcaa 46019653  T

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Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 204 - 257
Target Start/End: Original strand, 25487491 - 25487544
Alignment:
Q  204 atttgagcttatttactagtataagcacttgtaagattgtttggaagaacttat 257  Q
    ||||||| |||| || ||| |||||||||||||||||||||||||||| |||||    
T  25487491 atttgagtttatctattagcataagcacttgtaagattgtttggaagagcttat 25487544  T

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Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 224 - 275
Target Start/End: Complemental strand, 21157884 - 21157833
Alignment:
Q  224 ataagcacttgtaagattgtttggaagaacttatagacacaacttatgacat 275  Q
    |||||||||||||||| ||||||||||| |||| ||| ||| ||||||||||    
T  21157884 ataagcacttgtaagactgtttggaagagcttacagaaacagcttatgacat 21157833  T

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Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 230 - 276
Target Start/End: Complemental strand, 12817045 - 12816999
Alignment:
Q  230 acttgtaagattgtttggaagaacttatagacacaacttatgacatg 276  Q
    |||||| |||||||||| ||||||||| ||| |||||||||||||||    
T  12817045 acttgtgagattgtttgaaagaacttagagaaacaacttatgacatg 12816999  T

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Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 343
Target Start/End: Original strand, 54325103 - 54325145
Alignment:
Q  301 ttatagcttatacgaaaacagcttgactttatcttatcttttg 343  Q
    |||||||||||| |||||||| |||||||||| ||||||||||    
T  54325103 ttatagcttatatgaaaacagtttgactttattttatcttttg 54325145  T

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Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 257
Target Start/End: Original strand, 19429404 - 19429457
Alignment:
Q  204 atttgagcttatttactagtataagcacttgtaagattgtttggaagaacttat 257  Q
    ||||||||||||||||| |||||| ||||||| ||| ||||||| ||| |||||    
T  19429404 atttgagcttatttactggtataaacacttgtgagactgtttgggagagcttat 19429457  T

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Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 273
Target Start/End: Complemental strand, 25717709 - 25717660
Alignment:
Q  224 ataagcacttgtaagattgtttggaagaacttatagacacaacttatgac 273  Q
    |||||||||||| | ||||||||||||| ||||| || ||||||||||||    
T  25717709 ataagcacttgtgaaattgtttggaagagcttatggaaacaacttatgac 25717660  T

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Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 245
Target Start/End: Complemental strand, 46797150 - 46797109
Alignment:
Q  204 atttgagcttatttactagtataagcacttgtaagattgttt 245  Q
    ||||||||||||||||| |||||||||||||| ||| |||||    
T  46797150 atttgagcttatttacttgtataagcacttgtgagactgttt 46797109  T

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Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 248
Target Start/End: Original strand, 4663679 - 4663723
Alignment:
Q  204 atttgagcttatttactagtataagcacttgtaagattgtttgga 248  Q
    ||||||||||||||| |  ||||| ||||||||||||||||||||    
T  4663679 atttgagcttatttagtgatataaacacttgtaagattgtttgga 4663723  T

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Target: chr8 (Bit Score: 34; Significance: 0.0000000005; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 224 - 293
Target Start/End: Complemental strand, 4560618 - 4560549
Alignment:
Q  224 ataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatgcccgtaagttgttttca 293  Q
    |||||||||||| || |||||||||||||||||| || | ||||||| ||||| | ||||| ||||||||    
T  4560618 ataagcacttgtgaggttgtttggaagaacttatggaaataacttataacatgtcagtaagctgttttca 4560549  T

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Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 293
Target Start/End: Complemental strand, 4511159 - 4511075
Alignment:
Q  209 agcttatttactagtataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatgcccgtaagttgttttca 293  Q
    ||||||| |||| |||||||||||||| ||| | || | ||||||||||  | |||||||| |||||||||||||| | ||||||    
T  4511159 agcttatctactggtataagcacttgtgagactattcgaaagaacttatgaaaacaacttaagacatgcccgtaagctattttca 4511075  T

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Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 197 - 276
Target Start/End: Original strand, 30191068 - 30191147
Alignment:
Q  197 taagctaatttgagcttatttactagtataagcacttgtaagattgtttggaagaacttatagacacaacttatgacatg 276  Q
    |||||| ||||||| |||| || | | |||||||||||| ||| ||||||| ||| ||||| || |||||||||||||||    
T  30191068 taagcttatttgagtttatctattggcataagcacttgttagactgtttgggagagcttatggaaacaacttatgacatg 30191147  T

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Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 258
Target Start/End: Original strand, 31884874 - 31884928
Alignment:
Q  204 atttgagcttatttactagtataagcacttgtaagattgtttggaagaacttata 258  Q
    |||||||||||| |||||| |||||||||||| ||| ||||||| | ||||||||    
T  31884874 atttgagcttatctactagcataagcacttgtgagagtgtttgggaaaacttata 31884928  T

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Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 343
Target Start/End: Original strand, 3537098 - 3537139
Alignment:
Q  302 tatagcttatacgaaaacagcttgactttatcttatcttttg 343  Q
    |||||||||||||||||||  |||||||||| ||||||||||    
T  3537098 tatagcttatacgaaaacaatttgactttattttatcttttg 3537139  T

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Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 257
Target Start/End: Complemental strand, 24326171 - 24326114
Alignment:
Q  200 gctaatttgagcttatttactagtataagcacttgtaagattgtttggaagaacttat 257  Q
    |||||||||||||||| |||| | |||||||||||| ||| ||||||| ||| |||||    
T  24326171 gctaatttgagcttatctactggcataagcacttgtgagactgtttgggagagcttat 24326114  T

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