View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19345_high_1 (Length: 358)

Name: NF19345_high_1
Description: NF19345
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19345_high_1
NF19345_high_1
[»] chr5 (56 HSPs)
chr5 (20-78)||(2799638-2799696)
chr5 (13-82)||(33402583-33402652)
chr5 (20-76)||(2805806-2805862)
chr5 (211-298)||(9200232-9200318)
chr5 (20-82)||(32110671-32110733)
chr5 (13-82)||(14057711-14057780)
chr5 (13-82)||(20040407-20040476)
chr5 (13-82)||(30788208-30788277)
chr5 (208-297)||(7693230-7693318)
chr5 (13-82)||(1098178-1098247)
chr5 (13-78)||(8627142-8627207)
chr5 (13-82)||(14633010-14633079)
chr5 (13-78)||(34347474-34347539)
chr5 (13-82)||(39925206-39925275)
chr5 (210-258)||(30969413-30969461)
chr5 (208-296)||(32563150-32563237)
chr5 (13-55)||(13548243-13548285)
chr5 (208-258)||(15724528-15724578)
chr5 (13-55)||(20022890-20022932)
chr5 (208-258)||(36866800-36866850)
chr5 (13-82)||(1781137-1781206)
chr5 (213-258)||(8466783-8466828)
chr5 (13-82)||(20503040-20503109)
chr5 (13-82)||(27675543-27675612)
chr5 (208-257)||(28416614-28416663)
chr5 (208-301)||(36860419-36860511)
chr5 (13-68)||(2551619-2551674)
chr5 (13-68)||(28142945-28143000)
chr5 (13-56)||(30721677-30721720)
chr5 (208-258)||(5837593-5837643)
chr5 (13-55)||(19344691-19344733)
chr5 (208-254)||(25501013-25501059)
chr5 (208-258)||(25668688-25668737)
chr5 (208-258)||(26268112-26268162)
chr5 (13-55)||(31191169-31191211)
chr5 (13-51)||(41263121-41263159)
chr5 (213-258)||(8741979-8742024)
chr5 (13-82)||(14139938-14140007)
chr5 (13-82)||(34169832-34169901)
chr5 (13-82)||(40316821-40316890)
chr5 (13-82)||(41410651-41410720)
chr5 (210-258)||(40133423-40133471)
chr5 (22-57)||(967220-967255)
chr5 (13-68)||(32474014-32474069)
chr5 (13-68)||(40079998-40080053)
chr5 (13-55)||(14607549-14607591)
chr5 (208-258)||(19119897-19119947)
chr5 (212-258)||(22019670-22019716)
chr5 (13-51)||(30211733-30211771)
chr5 (210-256)||(35933942-35933988)
chr5 (13-82)||(1831354-1831423)
chr5 (13-82)||(9936880-9936949)
chr5 (13-82)||(10465287-10465356)
chr5 (269-302)||(31642592-31642625)
chr5 (208-256)||(13956432-13956480)
chr5 (226-258)||(27330344-27330376)
[»] chr3 (60 HSPs)
chr3 (13-82)||(18013457-18013526)
chr3 (13-82)||(901075-901144)
chr3 (13-82)||(29720398-29720467)
chr3 (13-65)||(36594406-36594458)
chr3 (13-88)||(42098614-42098689)
chr3 (13-88)||(53274982-53275057)
chr3 (13-55)||(34669638-34669680)
chr3 (13-82)||(1334282-1334351)
chr3 (13-82)||(9484599-9484668)
chr3 (13-82)||(29455695-29455764)
chr3 (13-82)||(29793365-29793434)
chr3 (13-82)||(48927789-48927858)
chr3 (13-82)||(49076413-49076482)
chr3 (13-82)||(50673680-50673749)
chr3 (13-80)||(52094081-52094148)
chr3 (13-55)||(12948070-12948112)
chr3 (208-258)||(44891535-44891585)
chr3 (13-75)||(47340071-47340133)
chr3 (13-82)||(2643256-2643325)
chr3 (13-74)||(3804451-3804512)
chr3 (13-82)||(4464884-4464953)
chr3 (13-82)||(16434844-16434913)
chr3 (13-82)||(28958986-28959055)
chr3 (13-82)||(34263691-34263760)
chr3 (13-66)||(43370310-43370363)
chr3 (22-82)||(44781979-44782039)
chr3 (13-80)||(1778366-1778433)
chr3 (13-56)||(4229175-4229218)
chr3 (13-68)||(32961263-32961318)
chr3 (24-82)||(14751040-14751098)
chr3 (208-258)||(34132964-34133014)
chr3 (13-55)||(34555181-34555223)
chr3 (13-55)||(36179123-36179165)
chr3 (208-258)||(44186598-44186648)
chr3 (13-87)||(49818755-49818829)
chr3 (13-82)||(29809348-29809417)
chr3 (212-257)||(33698218-33698263)
chr3 (208-256)||(4015491-4015539)
chr3 (13-69)||(26759495-26759551)
chr3 (208-256)||(37157739-37157787)
chr3 (208-256)||(37203098-37203146)
chr3 (15-79)||(43170000-43170064)
chr3 (20-68)||(46818383-46818431)
chr3 (13-56)||(4945838-4945881)
chr3 (13-80)||(38878465-38878532)
chr3 (269-304)||(39282637-39282672)
chr3 (13-55)||(1325534-1325576)
chr3 (210-256)||(2613921-2613967)
chr3 (208-258)||(21193635-21193685)
chr3 (208-258)||(29099384-29099434)
chr3 (208-258)||(35844355-35844405)
chr3 (13-51)||(38833952-38833990)
chr3 (224-258)||(45174532-45174566)
chr3 (21-55)||(46866373-46866407)
chr3 (20-82)||(47069409-47069471)
chr3 (208-258)||(47481551-47481601)
chr3 (217-258)||(25579768-25579809)
chr3 (13-58)||(29588400-29588445)
chr3 (208-256)||(2007964-2008012)
chr3 (208-256)||(11466855-11466903)
[»] chr2 (38 HSPs)
chr2 (13-82)||(8896274-8896343)
chr2 (13-79)||(16126073-16126139)
chr2 (13-79)||(16333486-16333552)
chr2 (13-82)||(16127771-16127840)
chr2 (208-298)||(27350053-27350143)
chr2 (208-258)||(43770954-43771004)
chr2 (13-82)||(7724602-7724671)
chr2 (13-82)||(8373437-8373506)
chr2 (13-82)||(41575565-41575634)
chr2 (13-56)||(11277580-11277623)
chr2 (13-80)||(12208994-12209061)
chr2 (13-68)||(43328792-43328847)
chr2 (13-63)||(2831729-2831779)
chr2 (212-258)||(19424747-19424793)
chr2 (13-71)||(22718534-22718592)
chr2 (13-55)||(38963825-38963867)
chr2 (13-82)||(10333569-10333638)
chr2 (20-68)||(44022285-44022333)
chr2 (211-258)||(18494386-18494433)
chr2 (13-80)||(18504477-18504544)
chr2 (20-55)||(31603414-31603449)
chr2 (208-295)||(33660483-33660569)
chr2 (216-258)||(4478407-4478449)
chr2 (208-258)||(33709347-33709397)
chr2 (13-55)||(40471766-40471808)
chr2 (208-258)||(41463965-41464015)
chr2 (208-257)||(33551101-33551150)
chr2 (13-82)||(41436835-41436904)
chr2 (208-301)||(4166918-4167010)
chr2 (211-258)||(13711502-13711549)
chr2 (208-254)||(4264192-4264238)
chr2 (13-55)||(5096278-5096320)
chr2 (13-71)||(15177383-15177441)
chr2 (13-55)||(37987927-37987969)
chr2 (13-82)||(6730094-6730163)
chr2 (208-256)||(26357617-26357665)
chr2 (210-258)||(31570851-31570899)
chr2 (14-82)||(37316879-37316947)
[»] chr4 (51 HSPs)
chr4 (13-72)||(29821063-29821122)
chr4 (13-82)||(43447168-43447237)
chr4 (13-82)||(48336419-48336488)
chr4 (13-82)||(3708256-3708325)
chr4 (13-82)||(40411600-40411669)
chr4 (13-82)||(42185277-42185346)
chr4 (13-89)||(8525407-8525483)
chr4 (13-79)||(1613209-1613275)
chr4 (208-256)||(4205156-4205204)
chr4 (13-68)||(33394094-33394149)
chr4 (208-255)||(34948220-34948267)
chr4 (212-308)||(39397907-39398002)
chr4 (13-68)||(53987771-53987826)
chr4 (208-258)||(7703555-7703605)
chr4 (13-55)||(31152691-31152733)
chr4 (208-254)||(37287776-37287822)
chr4 (13-82)||(10384851-10384920)
chr4 (20-69)||(37164032-37164081)
chr4 (13-82)||(37667765-37667834)
chr4 (13-82)||(39332821-39332890)
chr4 (13-82)||(55631866-55631935)
chr4 (208-256)||(17167753-17167801)
chr4 (208-256)||(17173330-17173378)
chr4 (13-68)||(1981373-1981428)
chr4 (13-68)||(23605893-23605948)
chr4 (208-296)||(37775670-37775757)
chr4 (13-80)||(39170963-39171030)
chr4 (13-80)||(46608218-46608285)
chr4 (13-80)||(47834135-47834202)
chr4 (13-68)||(50684937-50684992)
chr4 (211-258)||(54499365-54499412)
chr4 (208-258)||(4598031-4598080)
chr4 (208-254)||(23761114-23761160)
chr4 (208-299)||(30002747-30002837)
chr4 (208-258)||(38011892-38011942)
chr4 (13-55)||(43047417-43047459)
chr4 (13-55)||(48380503-48380545)
chr4 (13-82)||(31657347-31657416)
chr4 (208-256)||(19089576-19089624)
chr4 (14-82)||(28899063-28899131)
chr4 (214-258)||(47253787-47253831)
chr4 (13-56)||(1377532-1377575)
chr4 (20-78)||(6520442-6520500)
chr4 (14-68)||(24334373-24334427)
chr4 (13-82)||(28914371-28914440)
chr4 (209-258)||(49376005-49376054)
chr4 (208-256)||(50764772-50764818)
chr4 (208-257)||(55241227-55241276)
chr4 (226-258)||(29584339-29584371)
chr4 (208-256)||(32592133-32592181)
chr4 (20-68)||(52818683-52818731)
[»] chr1 (44 HSPs)
chr1 (13-76)||(38786942-38787005)
chr1 (13-68)||(40883428-40883483)
chr1 (13-75)||(49903681-49903743)
chr1 (210-258)||(7079168-7079216)
chr1 (13-71)||(10648197-10648255)
chr1 (13-82)||(1821624-1821693)
chr1 (13-82)||(12685894-12685963)
chr1 (13-78)||(29253486-29253551)
chr1 (13-82)||(31932174-31932243)
chr1 (13-82)||(41855717-41855786)
chr1 (13-82)||(44452198-44452267)
chr1 (13-82)||(45299321-45299390)
chr1 (13-80)||(6017445-6017512)
chr1 (13-55)||(10100509-10100551)
chr1 (13-55)||(10124139-10124181)
chr1 (208-258)||(11742442-11742492)
chr1 (13-79)||(26543874-26543940)
chr1 (208-258)||(47279223-47279273)
chr1 (13-82)||(8251145-8251214)
chr1 (208-257)||(48620672-48620721)
chr1 (20-68)||(52688547-52688594)
chr1 (215-257)||(3534967-3535009)
chr1 (13-82)||(2126655-2126724)
chr1 (13-82)||(5606387-5606456)
chr1 (13-82)||(8048744-8048813)
chr1 (13-82)||(28490163-28490232)
chr1 (13-82)||(41414206-41414275)
chr1 (13-82)||(44240522-44240591)
chr1 (13-82)||(48312032-48312100)
chr1 (13-82)||(50014557-50014626)
chr1 (13-82)||(52749284-52749353)
chr1 (214-254)||(3309186-3309226)
chr1 (13-69)||(27581065-27581121)
chr1 (208-304)||(1547276-1547371)
chr1 (13-72)||(3138618-3138676)
chr1 (13-56)||(48389095-48389138)
chr1 (13-55)||(7075326-7075368)
chr1 (208-258)||(32216089-32216139)
chr1 (267-300)||(28012047-28012080)
chr1 (13-82)||(43453161-43453230)
chr1 (208-256)||(9903146-9903194)
chr1 (214-258)||(16415679-16415723)
chr1 (13-57)||(33730190-33730234)
chr1 (269-305)||(42721027-42721063)
[»] scaffold0204 (1 HSPs)
scaffold0204 (13-82)||(23941-24010)
[»] chr8 (46 HSPs)
chr8 (13-82)||(44717299-44717368)
chr8 (19-82)||(3466286-3466349)
chr8 (13-79)||(8496875-8496941)
chr8 (13-78)||(4960158-4960223)
chr8 (13-82)||(20671259-20671328)
chr8 (13-82)||(40645612-40645681)
chr8 (13-68)||(17523822-17523877)
chr8 (13-82)||(11756779-11756848)
chr8 (13-82)||(28583292-28583361)
chr8 (13-82)||(44887704-44887773)
chr8 (26-82)||(8123658-8123714)
chr8 (13-89)||(30464428-30464504)
chr8 (208-256)||(36695069-36695117)
chr8 (208-258)||(465879-465929)
chr8 (13-55)||(4327108-4327150)
chr8 (20-82)||(14378682-14378744)
chr8 (13-55)||(25691586-25691628)
chr8 (208-254)||(38644019-38644065)
chr8 (13-82)||(14584196-14584265)
chr8 (13-82)||(44947021-44947089)
chr8 (210-258)||(11727061-11727109)
chr8 (210-258)||(13307660-13307708)
chr8 (13-80)||(38842167-38842235)
chr8 (13-68)||(25009161-25009216)
chr8 (13-68)||(29917917-29917971)
chr8 (13-80)||(37094137-37094204)
chr8 (13-68)||(40035304-40035359)
chr8 (208-258)||(40862456-40862507)
chr8 (13-68)||(44039842-44039897)
chr8 (19-69)||(66942-66992)
chr8 (208-258)||(9864185-9864235)
chr8 (13-55)||(21132917-21132959)
chr8 (208-258)||(27082941-27082991)
chr8 (13-82)||(23437802-23437871)
chr8 (13-78)||(30653367-30653432)
chr8 (13-89)||(761546-761622)
chr8 (208-256)||(12876148-12876196)
chr8 (211-258)||(24823378-24823425)
chr8 (16-82)||(9420745-9420811)
chr8 (208-254)||(16446978-16447024)
chr8 (208-254)||(34952134-34952180)
chr8 (208-258)||(37970622-37970672)
chr8 (20-57)||(2026600-2026637)
chr8 (13-82)||(7475374-7475443)
chr8 (13-58)||(29616315-29616360)
chr8 (210-258)||(43025739-43025787)
[»] chr7 (44 HSPs)
chr7 (13-82)||(36819619-36819688)
chr7 (20-85)||(47713431-47713496)
chr7 (20-78)||(18756606-18756664)
chr7 (13-79)||(38850708-38850774)
chr7 (13-82)||(16807138-16807207)
chr7 (13-82)||(37101018-37101087)
chr7 (13-82)||(38069054-38069123)
chr7 (13-78)||(40818689-40818754)
chr7 (20-82)||(31496644-31496706)
chr7 (208-257)||(5657579-5657628)
chr7 (13-82)||(9173328-9173397)
chr7 (13-82)||(28016119-28016187)
chr7 (13-82)||(30462213-30462282)
chr7 (13-82)||(32222553-32222622)
chr7 (13-57)||(46242472-46242516)
chr7 (208-258)||(27421477-27421527)
chr7 (15-68)||(25274011-25274064)
chr7 (20-76)||(19817314-19817370)
chr7 (214-258)||(43686054-43686098)
chr7 (13-60)||(5842142-5842189)
chr7 (208-255)||(8861301-8861348)
chr7 (208-299)||(30055499-30055590)
chr7 (13-68)||(38441830-38441885)
chr7 (13-55)||(4620097-4620139)
chr7 (208-258)||(12165765-12165815)
chr7 (208-258)||(29173553-29173603)
chr7 (20-82)||(33376778-33376840)
chr7 (208-254)||(34362246-34362292)
chr7 (13-55)||(35693822-35693864)
chr7 (13-82)||(9136654-9136723)
chr7 (208-298)||(31579167-31579256)
chr7 (13-82)||(40231931-40232000)
chr7 (210-258)||(4582932-4582980)
chr7 (208-256)||(22687254-22687302)
chr7 (210-257)||(6546533-6546580)
chr7 (211-258)||(26980336-26980383)
chr7 (13-68)||(38259501-38259556)
chr7 (13-68)||(41007948-41008003)
chr7 (208-258)||(12390728-12390778)
chr7 (208-258)||(21991649-21991699)
chr7 (216-257)||(44598378-44598419)
chr7 (210-258)||(23111203-23111251)
chr7 (210-258)||(48928396-48928444)
chr7 (210-258)||(48928663-48928711)
[»] chr6 (36 HSPs)
chr6 (13-82)||(24949538-24949607)
chr6 (208-258)||(8513271-8513321)
chr6 (20-82)||(16661605-16661667)
chr6 (20-73)||(10109414-10109467)
chr6 (13-82)||(17496314-17496383)
chr6 (13-68)||(4890122-4890177)
chr6 (20-82)||(2667328-2667390)
chr6 (13-55)||(6142503-6142545)
chr6 (13-55)||(29515022-29515064)
chr6 (13-82)||(24798542-24798611)
chr6 (13-82)||(30699264-30699333)
chr6 (208-256)||(29182203-29182251)
chr6 (13-80)||(13358514-13358581)
chr6 (210-257)||(33893100-33893147)
chr6 (13-55)||(2141598-2141640)
chr6 (208-258)||(4318919-4318969)
chr6 (208-258)||(6088946-6088996)
chr6 (13-55)||(6188652-6188694)
chr6 (13-55)||(24825195-24825237)
chr6 (13-82)||(2397773-2397842)
chr6 (13-82)||(29795454-29795523)
chr6 (13-82)||(31948637-31948706)
chr6 (13-78)||(32673755-32673820)
chr6 (20-55)||(2656673-2656708)
chr6 (208-258)||(3880035-3880085)
chr6 (20-82)||(31708896-31708958)
chr6 (208-301)||(1945829-1945922)
chr6 (13-82)||(32541473-32541542)
chr6 (13-58)||(35117307-35117352)
chr6 (13-77)||(28483046-28483110)
chr6 (210-257)||(15491654-15491701)
chr6 (13-56)||(16969407-16969450)
chr6 (208-258)||(7235130-7235180)
chr6 (13-55)||(9022870-9022912)
chr6 (267-299)||(11084170-11084202)
chr6 (13-68)||(12676996-12677052)
[»] scaffold0500 (1 HSPs)
scaffold0500 (13-82)||(667-736)
[»] scaffold0289 (1 HSPs)
scaffold0289 (22-67)||(9153-9198)
[»] scaffold0221 (1 HSPs)
scaffold0221 (13-82)||(5379-5448)
[»] scaffold0009 (1 HSPs)
scaffold0009 (210-258)||(42386-42434)
[»] scaffold0001 (1 HSPs)
scaffold0001 (13-55)||(183996-184038)
[»] scaffold0283 (1 HSPs)
scaffold0283 (13-82)||(2999-3067)
[»] scaffold1248 (1 HSPs)
scaffold1248 (13-72)||(1448-1507)
[»] scaffold0952 (1 HSPs)
scaffold0952 (13-72)||(806-865)
[»] scaffold0069 (1 HSPs)
scaffold0069 (20-68)||(4458-4506)
[»] scaffold0291 (1 HSPs)
scaffold0291 (208-256)||(7927-7975)
[»] scaffold0002 (1 HSPs)
scaffold0002 (208-256)||(94480-94528)


Alignment Details
Target: chr5 (Bit Score: 55; Significance: 1e-22; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 2799696 - 2799638
Alignment:
Q  20 tcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacgga 78  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  2799696 tcaaagtaagttaggtcaaaattgcacattttcaaatgggtcatctattacggaacgga 2799638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 33402583 - 33402652
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||||||||||||||||||||||||||| |||||||| |||  ||||||||||||||| |||||||||    
T  33402583 aatatgatcaaagtaagttaggtcaaaattacacatttttaaacagatcatctattacgggacggaggga 33402652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 2805862 - 2805806
Alignment:
Q  20 tcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacg 76  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  2805862 tcaaagtaaattaggtcaaaattgcacattttcaaatgggtcatctattacggaacg 2805806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 211 - 298
Target Start/End: Complemental strand, 9200318 - 9200232
Alignment:
Q  211 gtggggtgttattcacaacacttttgatattatagtgttaacttcaccnnnnnnnnttattttaatgacttcaccatagaattttcct 298  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||||        |||||||||||||||||||||| |||||||||    
T  9200318 gtggggtgttactcacaacacttttgatgttatagtgttaacttcacc-agaaaagttattttaatgacttcaccataaaattttcct 9200232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 20 - 82
Target Start/End: Original strand, 32110671 - 32110733
Alignment:
Q  20 tcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    ||||||||| |||| |||||||||||||||||||||||||| ||||||| |||||||||||||    
T  32110671 tcaaagtaaattagatcaaaattgcacattttcaaatggattatctattgcggaacggaggga 32110733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 14057780 - 14057711
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    ||||||||||||||||||||||||||||||||| |||||||||  |||||| |||| ||| |||||||||    
T  14057780 aatatgatcaaagtaagttaggtcaaaattgcatattttcaaacagatcatttattgcgggacggaggga 14057711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 20040407 - 20040476
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| ||||||||||||||||||||||||||||||||||||  | |||| |||||||| |||||||||    
T  20040407 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggaggga 20040476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 30788277 - 30788208
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| ||||||||||||| ||||||||| ||||||||||||||| |||| |||||||| |||||||||    
T  30788277 aatatggtcaaagtaagttatgtcaaaattacacattttcaaatgggtcatatattacgggacggaggga 30788208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 208 - 297
Target Start/End: Complemental strand, 7693318 - 7693230
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttcaccnnnnnnnnttattttaatgacttcaccatagaattttcc 297  Q
    |||||||| ||||| |||||||||||||||| |||||||||||||||||||        | |||||||||||||||||||||||||||||    
T  7693318 acagtgggatgttactcacaacacttttgatgttatagtgttaacttcacc-agaaaagtcattttaatgacttcaccatagaattttcc 7693230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 1098247 - 1098178
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| ||||||||||||||||||||||||||||||||||||  | |||| |||| ||| |||||||||    
T  1098247 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggaggga 1098178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 8627207 - 8627142
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacgga 78  Q
    |||||| |||||||||||||| |||||||||||||||||||||| | ||||||||| ||| |||||    
T  8627207 aatatggtcaaagtaagttagatcaaaattgcacattttcaaataggtcatctattgcgggacgga 8627142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 14633079 - 14633010
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| ||||||||||||||||||||||||||||||||||||  |||||| |||| | | |||||||||    
T  14633079 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagatcatttattgcaggacggaggga 14633010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 34347539 - 34347474
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacgga 78  Q
    |||||| ||||||||||||| ||||||||| ||||||||||||| | ||||||||| |||||||||    
T  34347539 aatatggtcaaagtaagttatgtcaaaattacacattttcaaataggtcatctattgcggaacgga 34347474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 39925275 - 39925206
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| ||||||||| || |||||||||| || |||||||||||||||||||||| ||| |||||||||    
T  39925275 aatatggtcaaagtaaatttggtcaaaattacaaattttcaaatggatcatctattgcgggacggaggga 39925206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 258
Target Start/End: Original strand, 30969413 - 30969461
Alignment:
Q  210 agtggggtgttattcacaacacttttgatattatagtgttaacttcacc 258  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||||    
T  30969413 agtggggtgttactcacaacacttttgatgttatagtgttaacttcacc 30969461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 208 - 296
Target Start/End: Complemental strand, 32563237 - 32563150
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttcaccnnnnnnnnttattttaatgacttcaccatagaattttc 296  Q
    ||||||| |||||| |||||||||||||||| ||||||||||||||||| |        | ||||||||||||||||||||||||||||    
T  32563237 acagtggagtgttactcacaacacttttgatgttatagtgttaacttcatc-agaaaaatcattttaatgacttcaccatagaattttc 32563150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 13548285 - 13548243
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  13548285 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 13548243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 208 - 258
Target Start/End: Complemental strand, 15724578 - 15724528
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttcacc 258  Q
    |||||||||||||| |||||| ||||||||| |||||||||||||||||||    
T  15724578 acagtggggtgttactcacaaaacttttgatgttatagtgttaacttcacc 15724528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 20022932 - 20022890
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  20022932 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 20022890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 208 - 258
Target Start/End: Complemental strand, 36866850 - 36866800
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttcacc 258  Q
    |||||||||||||| |||||| | |||||||||||||||||||||||||||    
T  36866850 acagtggggtgttactcacaatatttttgatattatagtgttaacttcacc 36866800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 1781137 - 1781206
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| ||||||||| ||||||||||||||||||||||||||  | |||| |||| ||| |||||||||    
T  1781137 aatatggtcaaagtaacttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggaggga 1781206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 8466828 - 8466783
Alignment:
Q  213 ggggtgttattcacaacacttttgatattatagtgttaacttcacc 258  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||    
T  8466828 ggggtgttattcacaacacttttgatgttacagtgttaacttcacc 8466783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 20503040 - 20503109
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| || |||||||||||||||||||| |||||||| ||||||| |||| ||| ||| |||||||||    
T  20503040 aatatggtctaagtaagttaggtcaaaattacacatttttaaatggaccatcaatttcgggacggaggga 20503109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 27675612 - 27675543
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||   |||| |||| ||| |||||||||    
T  27675612 aatatgatcaaagtaagctaggtcaaaattgcaaattttcaaataagtcatttattgcgggacggaggga 27675543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 257
Target Start/End: Original strand, 28416614 - 28416663
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttcac 257  Q
    |||||||| ||||| |||||| ||||||||||||||||||||||||||||    
T  28416614 acagtgggatgttactcacaatacttttgatattatagtgttaacttcac 28416663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 208 - 301
Target Start/End: Complemental strand, 36860511 - 36860419
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttcaccnnnnnnnnttattttaatgacttcaccatagaattttccttat 301  Q
    |||||||||||||| |||||||| |||| ||| ||||||||||||||||||        | |||||  ||||||||||||||||||||||||||    
T  36860511 acagtggggtgttactcacaacattttttatactatagtgttaacttcacc-agaaaaatcattttcgtgacttcaccatagaattttccttat 36860419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 2551619 - 2551674
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctatt 68  Q
    |||||| | ||| |||||||||||||||||||||||||| |||||| |||||||||    
T  2551619 aatatggttaaaataagttaggtcaaaattgcacatttttaaatgggtcatctatt 2551674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 28143000 - 28142945
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctatt 68  Q
    |||||| ||||||||| |||| | |||||||||||||||||||||||| |||||||    
T  28143000 aatatggtcaaagtaaattagattaaaattgcacattttcaaatggattatctatt 28142945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 30721677 - 30721720
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaat 56  Q
    |||||| ||||| |||||||||||||||||||||||||||||||    
T  30721677 aatatggtcaaaataagttaggtcaaaattgcacattttcaaat 30721720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 258
Target Start/End: Complemental strand, 5837643 - 5837593
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttcacc 258  Q
    |||||||||||||| ||||||||||||||||  |||||||||| |||||||    
T  5837643 acagtggggtgttactcacaacacttttgatgctatagtgttaccttcacc 5837593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 19344691 - 19344733
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    |||||| ||||| ||||||||||||||||||||||||||||||    
T  19344691 aatatggtcaaaataagttaggtcaaaattgcacattttcaaa 19344733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 254
Target Start/End: Original strand, 25501013 - 25501059
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaactt 254  Q
    |||||| ||||||||||||||||||||||||  ||||||||||||||    
T  25501013 acagtgaggtgttattcacaacacttttgatgctatagtgttaactt 25501059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 258
Target Start/End: Complemental strand, 25668737 - 25668688
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttcacc 258  Q
    |||||||||||||| |||||||||||||||| ||| |||||||||||||||    
T  25668737 acagtggggtgttactcacaacacttttgatgtta-agtgttaacttcacc 25668688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 258
Target Start/End: Complemental strand, 26268162 - 26268112
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttcacc 258  Q
    |||||||||||||| ||| ||||||||||||  ||||||||||||||||||    
T  26268162 acagtggggtgttactcaaaacacttttgatgctatagtgttaacttcacc 26268112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 31191169 - 31191211
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    |||||| ||||||||| ||||||||||||||||||||||||||    
T  31191169 aatatggtcaaagtaaattaggtcaaaattgcacattttcaaa 31191211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 51
Target Start/End: Original strand, 41263121 - 41263159
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacatttt 51  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  41263121 aatatggtcaaagtaagttaggtcaaaattgcacatttt 41263159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 8741979 - 8742024
Alignment:
Q  213 ggggtgttattcacaacacttttgatattatagtgttaacttcacc 258  Q
    ||||||||| ||||||||||||||||  ||||||||||||||||||    
T  8741979 ggggtgttactcacaacacttttgatgctatagtgttaacttcacc 8742024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 14140007 - 14139938
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    ||||||||||||||||  ||| ||||||||||| |||||||| | ||||||||||| ||| || ||||||    
T  14140007 aatatgatcaaagtaaactagatcaaaattgcaaattttcaattagatcatctattgcgggacagaggga 14139938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 34169901 - 34169832
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| |||||||||  ||| ||||||||||| |||||||||| ||||||||||| ||| ||| |||||    
T  34169901 aatatggtcaaagtaaactagatcaaaattgcaaattttcaaatagatcatctattgcgggacgaaggga 34169832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 40316890 - 40316821
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| || |||||| ||||||||||||||||||||||||||  | |||| |||| ||| |||||||||    
T  40316890 aatatggtcgaagtaaattaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggaggga 40316821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 41410651 - 41410720
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| || |||||| ||||||||||||||||||||||||||  | |||| |||| ||| |||||||||    
T  41410651 aatatggtcgaagtaaattaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggaggga 41410720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 258
Target Start/End: Complemental strand, 40133471 - 40133423
Alignment:
Q  210 agtggggtgttattcacaacacttttgatattatagtgttaacttcacc 258  Q
    |||||||||||| |||||||| |||||||| |||| |||||||||||||    
T  40133471 agtggggtgttactcacaacatttttgatactataatgttaacttcacc 40133423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 57
Target Start/End: Complemental strand, 967255 - 967220
Alignment:
Q  22 aaagtaagttaggtcaaaattgcacattttcaaatg 57  Q
    |||||||||||||||||||||||| |||||||||||    
T  967255 aaagtaagttaggtcaaaattgcaaattttcaaatg 967220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 32474014 - 32474069
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctatt 68  Q
    |||||| ||||| ||||||| || |||||| ||||||||||||||| |||||||||    
T  32474014 aatatggtcaaaataagttatgttaaaattacacattttcaaatgggtcatctatt 32474069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 40080053 - 40079998
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctatt 68  Q
    |||||| |||||||||||||||| ||||||| | |||||||||| | |||||||||    
T  40080053 aatatggtcaaagtaagttaggttaaaattgtaaattttcaaataggtcatctatt 40079998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 14607549 - 14607591
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    |||||| ||||| ||| ||||||||||||||||||||||||||    
T  14607549 aatatggtcaaattaaattaggtcaaaattgcacattttcaaa 14607591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 258
Target Start/End: Complemental strand, 19119947 - 19119897
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttcacc 258  Q
    |||||||||||||| |  |||||||||||||  ||||||||||||||||||    
T  19119947 acagtggggtgttactagcaacacttttgatgctatagtgttaacttcacc 19119897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 258
Target Start/End: Complemental strand, 22019716 - 22019670
Alignment:
Q  212 tggggtgttattcacaacacttttgatattatagtgttaacttcacc 258  Q
    |||||||||| ||||||||||||||||  |||||| |||||||||||    
T  22019716 tggggtgttactcacaacacttttgattctatagttttaacttcacc 22019670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 51
Target Start/End: Original strand, 30211733 - 30211771
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacatttt 51  Q
    |||||| |||||||||||||| |||||||||||||||||    
T  30211733 aatatggtcaaagtaagttagatcaaaattgcacatttt 30211771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 35933988 - 35933942
Alignment:
Q  210 agtggggtgttattcacaacacttttgatattatagtgttaacttca 256  Q
    |||| ||||||| ||||||||||||||||  ||||||||||||||||    
T  35933988 agtgaggtgttactcacaacacttttgattctatagtgttaacttca 35933942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 1831423 - 1831354
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| || |||||| ||| ||||||||||||||||||||||  | |||| |||| ||| |||||||||    
T  1831423 aatatggtcgaagtaaattatgtcaaaattgcacattttcaaacaggtcatttattgcgggacggaggga 1831354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 9936880 - 9936949
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| ||||| ||| |||| ||||||||||||||||| ||||  ||||| |||| ||| |||||||||    
T  9936880 aatatggtcaaaataaattagatcaaaattgcacatttttaaatatatcatttattgcgggacggaggga 9936949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 10465287 - 10465356
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| |||||||||| ||||||||||||  | |||||||||| | ||||||||| ||| | |||||||    
T  10465287 aatatggtcaaagtaagataggtcaaaattataaattttcaaataggtcatctattgcgggagggaggga 10465356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 302
Target Start/End: Complemental strand, 31642625 - 31642592
Alignment:
Q  269 attttaatgacttcaccatagaattttccttata 302  Q
    |||||||| |||||||||||||||||||||||||    
T  31642625 attttaataacttcaccatagaattttccttata 31642592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 208 - 256
Target Start/End: Original strand, 13956432 - 13956480
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttca 256  Q
    |||||| ||||||| |||| ||| ||||||| |||||||||||||||||    
T  13956432 acagtgaggtgttactcactacagttttgatgttatagtgttaacttca 13956480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 226 - 258
Target Start/End: Complemental strand, 27330376 - 27330344
Alignment:
Q  226 caacacttttgatattatagtgttaacttcacc 258  Q
    ||||||||||||| |||||||||||||||||||    
T  27330376 caacacttttgatgttatagtgttaacttcacc 27330344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 6e-22; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 18013457 - 18013526
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  18013457 aatatgatcaaagtaaattatgtcaaaattgcacattttcaaatgggtcatctattacgggacggaggga 18013526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 901075 - 901144
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||||| |||| ||| |||||||||    
T  901075 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacagatcatttattgcgggacggaggga 901144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 29720467 - 29720398
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||| ||||||||||||||||||||||||||||||||||||||  |||||| |||| ||| |||||||||    
T  29720467 aataggatcaaagtaagttaggtcaaaattgcacattttcaaacagatcatttattgcgggacggaggga 29720398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 36594406 - 36594458
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatct 65  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  36594406 aatatgatcaaaataagttaggtcaaaattacacattttcaaatggatcatct 36594458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 42098614 - 42098689
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggagggattaact 88  Q
    |||||| ||||||||||||||||||||||||||||||||||||  | |||| |||| ||| ||||||||| |||||    
T  42098614 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagggagtaact 42098689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 13 - 88
Target Start/End: Original strand, 53274982 - 53275057
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggagggattaact 88  Q
    |||||||||||| ||||||||||||||||||||||||||||||| | |||| |||| ||| ||||| ||| |||||    
T  53274982 aatatgatcaaaataagttaggtcaaaattgcacattttcaaataggtcatttattgcgggacggaaggagtaact 53275057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 34669680 - 34669638
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  34669680 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa 34669638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 1334282 - 1334351
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| | ||| |||||||| |||||||| ||||||||||||||| ||||||||| |||||||||||||    
T  1334282 aatatggtaaaattaagttagatcaaaattacacattttcaaatgggtcatctattgcggaacggaggga 1334351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 9484668 - 9484599
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| ||||||||||||||||||||||||||||||||||||  | |||| |||| ||| |||||||||    
T  9484668 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggaggga 9484599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 29455695 - 29455764
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| ||||||||||||||||||||||||||||||||||||  | |||| |||||| | |||||||||    
T  29455695 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacaggacggaggga 29455764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 29793365 - 29793434
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| ||||||||||||||||||||||||||||||||||||  | |||| |||| ||| |||||||||    
T  29793365 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggaggga 29793434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 48927789 - 48927858
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| |||||||||||||||| |||||||||||||||||||  |||||| |||| ||| |||||||||    
T  48927789 aatatggtcaaagtaagttaggtaaaaattgcacattttcaaacagatcatttattgcgggacggaggga 48927858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 49076413 - 49076482
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| ||||||||||||||||||||||||||||||||||||  | |||| |||| ||| |||||||||    
T  49076413 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggaggga 49076482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 50673749 - 50673680
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| ||||||||||||| ||||||||||||||||||||||  | |||| |||| |||||||||||||    
T  50673749 aatatggtcaaagtaagttaagtcaaaattgcacattttcaaacaggtcatttattgcggaacggaggga 50673680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 52094081 - 52094148
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggagg 80  Q
    |||||| ||||| |||||||| ||||||||||| |||||||||||  ||||||||| |||||||||||    
T  52094081 aatatggtcaaattaagttagatcaaaattgcaaattttcaaatgagtcatctattgcggaacggagg 52094148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 12948112 - 12948070
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  12948112 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 12948070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 208 - 258
Target Start/End: Complemental strand, 44891585 - 44891535
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttcacc 258  Q
    |||||||| ||||| |||||||||||||||| |||||||||||||||||||    
T  44891585 acagtgggatgttactcacaacacttttgatgttatagtgttaacttcacc 44891535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 75
Target Start/End: Original strand, 47340071 - 47340133
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaac 75  Q
    |||||||||||||||| |||| |||||||||||||| ||||||||| |||| |||| ||||||    
T  47340071 aatatgatcaaagtaaattagatcaaaattgcacatcttcaaatgggtcatatattgcggaac 47340133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 2643256 - 2643325
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| |||||||||  ||||||||||||||| |||||||||| | ||||||||| ||| |||||||||    
T  2643256 aatatggtcaaagtaaactaggtcaaaattgcaaattttcaaataggtcatctattgcgggacggaggga 2643325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 3804512 - 3804451
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaa 74  Q
    |||||||||||||||| |||| ||||||||| |||||||||||||| |||| |||| |||||    
T  3804512 aatatgatcaaagtaaattagatcaaaattgtacattttcaaatgggtcatgtattgcggaa 3804451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 4464953 - 4464884
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    ||||||||||||||||  ||||| || |||||| |||||||||| ||||||||||| ||| |||||||||    
T  4464953 aatatgatcaaagtaaactaggttaacattgcaaattttcaaatagatcatctattgcgggacggaggga 4464884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 16434844 - 16434913
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| ||||| ||||||||||||||||||||||||||||||  | |||| |||| ||| |||||||||    
T  16434844 aatatggtcaaaataagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggaggga 16434913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 28958986 - 28959055
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| |||||||||| ||||||||||||||| ||||| |||| ||||||||||| ||  |||||||||    
T  28958986 aatatggtcaaagtaagctaggtcaaaattgcaaatttttaaatagatcatctattgcgagacggaggga 28959055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 34263691 - 34263760
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| |||||||||||||||||||||||||||||||| |||  | |||| |||| ||| |||||||||    
T  34263691 aatatggtcaaagtaagttaggtcaaaattgcacatttttaaacaggtcatttattgcgggacggaggga 34263760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 43370363 - 43370310
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatcta 66  Q
    |||| ||||||||||||||| ||||||||||||||||||||||| | |||||||    
T  43370363 aatacgatcaaagtaagttatgtcaaaattgcacattttcaaataggtcatcta 43370310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 44781979 - 44782039
Alignment:
Q  22 aaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||||||||| ||||||||||| |||||||||| | ||||||||| ||| |||||||||    
T  44781979 aaagtaagttagttcaaaattgcaaattttcaaataggtcatctattgcgggacggaggga 44782039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 1778433 - 1778366
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggagg 80  Q
    |||||| |||||||||| || |||||||||||| |||||||||| | ||||||||| ||| |||||||    
T  1778433 aatatggtcaaagtaagctaagtcaaaattgcaaattttcaaataggtcatctattgcgggacggagg 1778366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 4229175 - 4229218
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaat 56  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||    
T  4229175 aatatgatcaaagtaagctaggtcaaaattgcaaattttcaaat 4229218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 32961318 - 32961263
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctatt 68  Q
    |||||| ||||| |||||||||||||||||||| ||||| |||||| |||||||||    
T  32961318 aatatggtcaaactaagttaggtcaaaattgcaaatttttaaatgggtcatctatt 32961263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 14751040 - 14751098
Alignment:
Q  24 agtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    ||||||||||||||||||||||||||||||||  | ||||||||| ||| | |||||||    
T  14751040 agtaagttaggtcaaaattgcacattttcaaacaggtcatctattgcgggagggaggga 14751098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 258
Target Start/End: Complemental strand, 34133014 - 34132964
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttcacc 258  Q
    |||||||||||||| |||||||| |||||||| ||||||||||| ||||||    
T  34133014 acagtggggtgttactcacaacatttttgatactatagtgttaatttcacc 34132964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 34555223 - 34555181
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    |||||| ||||||||||||||||||||| ||||||||||||||    
T  34555223 aatatggtcaaagtaagttaggtcaaaaatgcacattttcaaa 34555181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 36179123 - 36179165
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    |||||||||||||||| ||| ||||||||||||||||||||||    
T  36179123 aatatgatcaaagtaaattaagtcaaaattgcacattttcaaa 36179165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 258
Target Start/End: Original strand, 44186598 - 44186648
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttcacc 258  Q
    |||| ||||||||| ||||||||||||||||  ||||||||||||||||||    
T  44186598 acagcggggtgttactcacaacacttttgatgctatagtgttaacttcacc 44186648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 49818829 - 49818755
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggagggattaac 87  Q
    |||||| ||||||||| |||||||||||||||| |||||||| |  |||||||||| ||| ||| ||||| ||||    
T  49818829 aatatggtcaaagtaaattaggtcaaaattgcaaattttcaactaaatcatctattgcgggacgaagggaataac 49818755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 29809417 - 29809348
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| || ||||||| ||| ||||||||||| |||||||||| | ||||||||| ||| |||||||||    
T  29809417 aatatggtcgaagtaagctagatcaaaattgcaaattttcaaataggtcatctattgcgggacggaggga 29809348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 212 - 257
Target Start/End: Complemental strand, 33698263 - 33698218
Alignment:
Q  212 tggggtgttattcacaacacttttgatattatagtgttaacttcac 257  Q
    |||||||||| |||||||| ||||||| ||||||||||||||||||    
T  33698263 tggggtgttactcacaacatttttgatgttatagtgttaacttcac 33698218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 256
Target Start/End: Complemental strand, 4015539 - 4015491
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttca 256  Q
    ||||| |||||||| ||||||||||||||||  ||||||||||||||||    
T  4015539 acagttgggtgttactcacaacacttttgatgctatagtgttaacttca 4015491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 26759551 - 26759495
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctatta 69  Q
    |||||| ||||||||||||||||||||||| || ||||| |||| |||||| |||||    
T  26759551 aatatggtcaaagtaagttaggtcaaaattacaaatttttaaatagatcatttatta 26759495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 256
Target Start/End: Complemental strand, 37157787 - 37157739
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttca 256  Q
    |||||||||||||| |||| ||| ||||||| |||||||||||||||||    
T  37157787 acagtggggtgttactcactacaattttgatgttatagtgttaacttca 37157739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 256
Target Start/End: Complemental strand, 37203146 - 37203098
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttca 256  Q
    |||||||||||||| |||| ||| ||||||| |||||||||||||||||    
T  37203146 acagtggggtgttactcactacaattttgatgttatagtgttaacttca 37203098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 43170064 - 43170000
Alignment:
Q  15 tatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggag 79  Q
    |||| ||||||||||||| |||||||||| | ||||| ||| |||||||||||| ||||| ||||    
T  43170064 tatggtcaaagtaagttaagtcaaaattgtatatttttaaacggatcatctattgcggaatggag 43170000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 46818383 - 46818431
Alignment:
Q  20 tcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctatt 68  Q
    ||||||||| |||| ||||||||| ||||||| ||||||||||||||||    
T  46818383 tcaaagtaaattagatcaaaattgtacatttttaaatggatcatctatt 46818431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 4945838 - 4945881
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaat 56  Q
    |||||| |||||||||||||||||||||||||| ||| ||||||    
T  4945838 aatatggtcaaagtaagttaggtcaaaattgcaaattctcaaat 4945881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 38878465 - 38878532
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggagg 80  Q
    |||||| ||||| ||| ||| ||||||||||||||||||||||  | |||| |||||||| |||||||    
T  38878465 aatatggtcaaaataatttatgtcaaaattgcacattttcaaacaggtcatttattacgggacggagg 38878532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 269 - 304
Target Start/End: Complemental strand, 39282672 - 39282637
Alignment:
Q  269 attttaatgacttcaccatagaattttccttataaa 304  Q
    ||||| ||||||||||||||||||||||||||||||    
T  39282672 attttcatgacttcaccatagaattttccttataaa 39282637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 1325534 - 1325576
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    ||||| ||||||||||||||||| ||||||||| |||||||||    
T  1325534 aatataatcaaagtaagttaggttaaaattgcaaattttcaaa 1325576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 2613967 - 2613921
Alignment:
Q  210 agtggggtgttattcacaacacttttgatattatagtgttaacttca 256  Q
    |||| ||||||| |||||||||||||| | |||||||||||||||||    
T  2613967 agtgtggtgttactcacaacacttttggtgttatagtgttaacttca 2613921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 258
Target Start/End: Complemental strand, 21193685 - 21193635
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttcacc 258  Q
    |||||||||||||| ||||||||||||||||   | |||||||||||||||    
T  21193685 acagtggggtgttactcacaacacttttgattcaacagtgttaacttcacc 21193635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 258
Target Start/End: Complemental strand, 29099434 - 29099384
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttcacc 258  Q
    |||||||||||||| |||| ||| |||| || |||||||||||||||||||    
T  29099434 acagtggggtgttactcacgacattttttatgttatagtgttaacttcacc 29099384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 258
Target Start/End: Complemental strand, 35844405 - 35844355
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttcacc 258  Q
    |||||| ||||||| |||||||| ||||| | |||||||||||||||||||    
T  35844405 acagtgaggtgttactcacaacatttttgttgttatagtgttaacttcacc 35844355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 51
Target Start/End: Original strand, 38833952 - 38833990
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacatttt 51  Q
    |||||| ||||||||||||||||||||||| ||||||||    
T  38833952 aatatggtcaaagtaagttaggtcaaaattacacatttt 38833990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 258
Target Start/End: Complemental strand, 45174566 - 45174532
Alignment:
Q  224 cacaacacttttgatattatagtgttaacttcacc 258  Q
    ||||||||||||||| |||||||||||||||||||    
T  45174566 cacaacacttttgatgttatagtgttaacttcacc 45174532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 55
Target Start/End: Complemental strand, 46866407 - 46866373
Alignment:
Q  21 caaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    |||| ||||||||||||||||||||||||||||||    
T  46866407 caaaataagttaggtcaaaattgcacattttcaaa 46866373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 82
Target Start/End: Complemental strand, 47069471 - 47069409
Alignment:
Q  20 tcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||||| ||||||||||||||| | |||||||||||  |||||||||  || |||||||||    
T  47069471 tcaaagtaggttaggtcaaaattgaaaattttcaaatgtgtcatctattgtgggacggaggga 47069409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 258
Target Start/End: Complemental strand, 47481601 - 47481551
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttcacc 258  Q
    |||||||||||||| |||  ||| ||||||| |||||||||||||||||||    
T  47481601 acagtggggtgttactcattacatttttgatgttatagtgttaacttcacc 47481551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 258
Target Start/End: Complemental strand, 25579809 - 25579768
Alignment:
Q  217 tgttattcacaacacttttgatattatagtgttaacttcacc 258  Q
    ||||||||||||||||||||||  |||||| |||||||||||    
T  25579809 tgttattcacaacacttttgatgctatagtattaacttcacc 25579768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 29588445 - 29588400
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatgg 58  Q
    |||||| |||||||||||||||||||||||| | ||||| ||||||    
T  29588445 aatatggtcaaagtaagttaggtcaaaattgtatattttgaaatgg 29588400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 208 - 256
Target Start/End: Complemental strand, 2008012 - 2007964
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttca 256  Q
    |||||||||||||| ||||||||||||| |   ||||||||||||||||    
T  2008012 acagtggggtgttactcacaacacttttaacgctatagtgttaacttca 2007964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 208 - 256
Target Start/End: Complemental strand, 11466903 - 11466855
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttca 256  Q
    |||||||||||||| |||||||||||  ||| ||||||| |||||||||    
T  11466903 acagtggggtgttactcacaacacttgcgatgttatagtcttaacttca 11466855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 6e-22; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 8896343 - 8896274
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||||    
T  8896343 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaatgggtcatctattgcggaatggaggga 8896274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 16126073 - 16126139
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggag 79  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||| |||| ||| ||||||    
T  16126073 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaatgggtcatttattgcgggacggag 16126139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 13 - 79
Target Start/End: Complemental strand, 16333552 - 16333486
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggag 79  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||| |||| ||| ||||||    
T  16333552 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaatgggtcatttattgcgggacggag 16333486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 16127771 - 16127840
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||||||||||||||||||||||||||| ||||||||||||| | |||| |||| ||| |||||||||    
T  16127771 aatatgatcaaagtaagttaggtcaaaattacacattttcaaataggtcatttattgcgggacggaggga 16127840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 298
Target Start/End: Original strand, 27350053 - 27350143
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttcaccnnnnnnnnttattttaatgacttcaccatagaattttcct 298  Q
    |||||| ||||||| |||||||| |||||||  ||||||||||||||||||        |||||||||||||||||||||| |||||||||    
T  27350053 acagtgtggtgttactcacaacatttttgatgctatagtgttaacttcaccaaaaaatattattttaatgacttcaccataaaattttcct 27350143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 258
Target Start/End: Original strand, 43770954 - 43771004
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttcacc 258  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  43770954 acagtggggtgttactcacaacacttttgatgttatagtgttaacttcacc 43771004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 7724602 - 7724671
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| ||||||||||||||||||||||||||||||||||||  | |||| |||| ||| |||||||||    
T  7724602 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggaggga 7724671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 8373506 - 8373437
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| ||||||||||||||||||||||||||||||||||||  |||||| |||| ||| || ||||||    
T  8373506 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagatcatttattgcgggacagaggga 8373437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 41575634 - 41575565
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    ||||||||||||||||| ||||||||||||||| |||||||||| | |||| |||| ||| |||||||||    
T  41575634 aatatgatcaaagtaagctaggtcaaaattgcaaattttcaaataggtcatttattgcgggacggaggga 41575565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 11277623 - 11277580
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaat 56  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  11277623 aatatgatcaaagtaagttatgtcaaaattgcacattttcaaat 11277580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 12209061 - 12208994
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggagg 80  Q
    |||||| ||||||||||||||||||||||||||||||||||||  | |||| |||| ||| |||||||    
T  12209061 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagg 12208994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 43328792 - 43328847
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctatt 68  Q
    |||||| |||||||||||||| ||||||||  ||||||||||||||||||||||||    
T  43328792 aatatggtcaaagtaagttagatcaaaattatacattttcaaatggatcatctatt 43328847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 2831779 - 2831729
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcat 63  Q
    |||||| ||||||||||||||||||||||| |||||||| |||||||||||    
T  2831779 aatatggtcaaagtaagttaggtcaaaattacacatttttaaatggatcat 2831729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 212 - 258
Target Start/End: Original strand, 19424747 - 19424793
Alignment:
Q  212 tggggtgttattcacaacacttttgatattatagtgttaacttcacc 258  Q
    |||||||||| |||||||||||||||| |||||||||||||||||||    
T  19424747 tggggtgttactcacaacacttttgatgttatagtgttaacttcacc 19424793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 22718534 - 22718592
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacg 71  Q
    |||||| |||||||||| ||||||||||||||| |||||||||| |||||| |||||||    
T  22718534 aatatggtcaaagtaagctaggtcaaaattgcaaattttcaaatagatcatttattacg 22718592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 38963867 - 38963825
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  38963867 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 38963825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 10333569 - 10333638
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| ||||| ||||||||||||||||| ||||||||||||  |||||| |||||||  |||||||||    
T  10333569 aatatggtcaaaataagttaggtcaaaattacacattttcaaacagatcatttattacgagacggaggga 10333638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 44022333 - 44022285
Alignment:
Q  20 tcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctatt 68  Q
    |||||||||||||||| ||||||||||||||||||| | ||||||||||    
T  44022333 tcaaagtaagttaggttaaaattgcacattttcaaacgaatcatctatt 44022285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 211 - 258
Target Start/End: Original strand, 18494386 - 18494433
Alignment:
Q  211 gtggggtgttattcacaacacttttgatattatagtgttaacttcacc 258  Q
    ||||||||||| ||||||||||||||||  ||||||||||||||||||    
T  18494386 gtggggtgttactcacaacacttttgatgctatagtgttaacttcacc 18494433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 18504544 - 18504477
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggagg 80  Q
    |||||| ||||| ||||||| ||||||||| |||||||||||||   ||||||||||||| |||||||    
T  18504544 aatatggtcaaaataagttacgtcaaaattacacattttcaaataagtcatctattacgggacggagg 18504477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 55
Target Start/End: Original strand, 31603414 - 31603449
Alignment:
Q  20 tcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    ||||||||||||||||||||||||||||||||||||    
T  31603414 tcaaagtaagttaggtcaaaattgcacattttcaaa 31603449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 208 - 295
Target Start/End: Original strand, 33660483 - 33660569
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttcaccnnnnnnnnttattttaatgacttcaccatagaatttt 295  Q
    ||||| |||||||| |||||||||||||||| ||||||||||||||| | |        | |||||||||||||||||||||||||||    
T  33660483 acagttgggtgttactcacaacacttttgatgttatagtgttaactt-aactagaaaagtcattttaatgacttcaccatagaatttt 33660569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 258
Target Start/End: Complemental strand, 4478449 - 4478407
Alignment:
Q  216 gtgttattcacaacacttttgatattatagtgttaacttcacc 258  Q
    |||||| |||||||||||||||| |||||||||||||||||||    
T  4478449 gtgttactcacaacacttttgatgttatagtgttaacttcacc 4478407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 258
Target Start/End: Original strand, 33709347 - 33709397
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttcacc 258  Q
    ||||||| |||||| || ||||||||||||| |||||||||||||||||||    
T  33709347 acagtggagtgttactcgcaacacttttgatgttatagtgttaacttcacc 33709397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 40471808 - 40471766
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    |||||||||||| ||||||| ||||||||||||||||||||||    
T  40471808 aatatgatcaaaataagttaagtcaaaattgcacattttcaaa 40471766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 258
Target Start/End: Original strand, 41463965 - 41464015
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttcacc 258  Q
    |||||| ||||||| |||||||||||||||| ||||||| |||||||||||    
T  41463965 acagtgaggtgttactcacaacacttttgattttatagtattaacttcacc 41464015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 208 - 257
Target Start/End: Original strand, 33551101 - 33551150
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttcac 257  Q
    |||||||||||||| |||| ||| ||||||| ||||||||||||||||||    
T  33551101 acagtggggtgttactcactacatttttgatgttatagtgttaacttcac 33551150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 41436904 - 41436835
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| |||||||||||||||||||||||  |||||||||||    |||| |||||||| |||||||||    
T  41436904 aatatggtcaaagtaagttaggtcaaaattatacattttcaaacatttcatttattacgggacggaggga 41436835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 301
Target Start/End: Complemental strand, 4167010 - 4166918
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttcaccnnnnnnnnttattttaatgacttcaccatagaattttccttat 301  Q
    |||||||||||||| |||||| | |||||||| |||| |||||||||||||        | |||||  ||||||||||||||||||||||||||    
T  4167010 acagtggggtgttactcacaatatttttgatactataatgttaacttcacc-agaaaagtcattttcgtgacttcaccatagaattttccttat 4166918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 211 - 258
Target Start/End: Complemental strand, 13711549 - 13711502
Alignment:
Q  211 gtggggtgttattcacaacacttttgatattatagtgttaacttcacc 258  Q
    ||||||||||| ||||||||||||||||  |||| |||||||||||||    
T  13711549 gtggggtgttactcacaacacttttgatgctataatgttaacttcacc 13711502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 254
Target Start/End: Original strand, 4264192 - 4264238
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaactt 254  Q
    |||||||| ||||| ||||||||||||||||  ||||||||||||||    
T  4264192 acagtgggatgttactcacaacacttttgatgctatagtgttaactt 4264238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 5096320 - 5096278
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    |||||||||||| ||||||| |||||||||| |||||||||||    
T  5096320 aatatgatcaaaataagttatgtcaaaattgtacattttcaaa 5096278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 15177441 - 15177383
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacg 71  Q
    |||||| |||||||||||||  | ||||||| |||||||||||| | ||||||||||||    
T  15177441 aatatggtcaaagtaagttaaattaaaattgtacattttcaaataggtcatctattacg 15177383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 37987927 - 37987969
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    |||||||||||||||| |||| |||||||||| ||||||||||    
T  37987927 aatatgatcaaagtaacttagatcaaaattgcgcattttcaaa 37987969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 6730094 - 6730163
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| |||| ||||| ||||||||||||||| |||||||| | | ||||||||| ||  |||||||||    
T  6730094 aatatggtcaatgtaagctaggtcaaaattgcaaattttcaagtaggtcatctattgcgagacggaggga 6730163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 208 - 256
Target Start/End: Complemental strand, 26357665 - 26357617
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttca 256  Q
    |||||||| ||||| |||| ||| ||||||| |||||||||||||||||    
T  26357665 acagtgggatgttactcactacagttttgatgttatagtgttaacttca 26357617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 258
Target Start/End: Original strand, 31570851 - 31570899
Alignment:
Q  210 agtggggtgttattcacaacacttttgatattatagtgttaacttcacc 258  Q
    |||||||||||| | ||||||||||| || |||||||||||| ||||||    
T  31570851 agtggggtgttacttacaacacttttaatgttatagtgttaatttcacc 31570899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 37316947 - 37316879
Alignment:
Q  14 atatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    ||||| |||||||||   |||||||||||||| |||||||||| | ||||| ||| ||| |||||||||    
T  37316947 atatggtcaaagtaaaccaggtcaaaattgcaaattttcaaataggtcatcgattgcgggacggaggga 37316879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 52; Significance: 9e-21; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 29821122 - 29821063
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacgg 72  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  29821122 aatatggtcaaagtaagttagatcaaaattgcacattttcaaatggatcatctattacgg 29821063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 43447237 - 43447168
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| ||||||||||||||||||||||||||||||||||||  |||||| |||||||| |||||||||    
T  43447237 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagatcatttattacgggacggaggga 43447168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 48336419 - 48336488
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||| ||||||||||||||||||||||||||||||||||||||||  ||||||||| ||| |||||||||    
T  48336419 aatacgatcaaagtaagttaggtcaaaattgcacattttcaaatgtgtcatctattgcgggacggaggga 48336488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 3708325 - 3708256
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||||| ||||  || |||||||||    
T  3708325 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacagatcatttattgtgggacggaggga 3708256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 40411600 - 40411669
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| ||||||||||||||||||||||||||||||||||||  | |||| |||||||| |||||||||    
T  40411600 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggaggga 40411669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 42185346 - 42185277
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| ||||| ||| |||||||||||||||| |||||||||||||||||||||| ||| |||||||||    
T  42185346 aatatggtcaaactaaattaggtcaaaattgcaaattttcaaatggatcatctattgcgggacggaggga 42185277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 8525407 - 8525483
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggagggattaactt 89  Q
    ||||||||||||||||||||||||||||||||| |||||||||  | |||| ||||| || ||||||||| ||||||    
T  8525407 aatatgatcaaagtaagttaggtcaaaattgcatattttcaaacaggtcatttattatgggacggagggagtaactt 8525483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 1613209 - 1613275
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggag 79  Q
    |||||| ||||||||| ||||||||||||| ||||||||||||| | ||||||||||||| ||||||    
T  1613209 aatatggtcaaagtaaattaggtcaaaattacacattttcaaataggtcatctattacgggacggag 1613275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 208 - 256
Target Start/End: Complemental strand, 4205204 - 4205156
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttca 256  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||||    
T  4205204 acagtggggtgttattcagaacatttttgatattatagtgttaacttca 4205156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 33394149 - 33394094
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctatt 68  Q
    |||||| |||||||||||||||||||||||||||||||| |||||| ||| |||||    
T  33394149 aatatggtcaaagtaagttaggtcaaaattgcacatttttaaatgggtcacctatt 33394094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 208 - 255
Target Start/End: Original strand, 34948220 - 34948267
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttc 255  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||||    
T  34948220 acagtggggtgttactcacaacacttttgatgttatagtgttaacttc 34948267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 212 - 308
Target Start/End: Complemental strand, 39398002 - 39397907
Alignment:
Q  212 tggggtgttattcacaacacttttgatattatagtgttaacttcaccnnnnnnnnttattttaatgacttcaccatagaattttccttataaaaaat 308  Q
    |||||||||| ||||||||||||| || |||||||||||||||||||        | ||| ||||||||||||||||||||||||| | ||||||||    
T  39398002 tggggtgttactcacaacacttttaatgttatagtgttaacttcacc-ataaaagtcattctaatgacttcaccatagaattttccatttaaaaaat 39397907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 53987771 - 53987826
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctatt 68  Q
    |||||| |||||||||||||||| || |||||||||||| ||||||||||||||||    
T  53987771 aatatggtcaaagtaagttaggttaatattgcacatttttaaatggatcatctatt 53987826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 208 - 258
Target Start/End: Complemental strand, 7703605 - 7703555
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttcacc 258  Q
    |||||||||||||| | |||||||||||||| |||||||||||||||||||    
T  7703605 acagtggggtgttactgacaacacttttgatgttatagtgttaacttcacc 7703555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 31152733 - 31152691
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  31152733 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 31152691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 208 - 254
Target Start/End: Complemental strand, 37287822 - 37287776
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaactt 254  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||    
T  37287822 acagtggggtgttactcacaacacttttgatgttatagtgttaactt 37287776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 10384920 - 10384851
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| | ||||||||||||||||||||||||||||||||||  | |||| |||| ||| |||||||||    
T  10384920 aatatggttaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggaggga 10384851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 37164081 - 37164032
Alignment:
Q  20 tcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctatta 69  Q
    |||||||||||||||||||||||| | |||||||||||| ||||||||||    
T  37164081 tcaaagtaagttaggtcaaaattgtatattttcaaatgggtcatctatta 37164032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 37667765 - 37667834
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| ||||||||| ||||||||||||||||||||||||||  | |||| |||| ||| |||||||||    
T  37667765 aatatggtcaaagtaaattaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggaggga 37667834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 39332821 - 39332890
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| |||||||||||||| |||||||||||||||||||||  |||||| |||| ||  |||||||||    
T  39332821 aatatggtcaaagtaagttagttcaaaattgcacattttcaaacagatcatttattgcgtgacggaggga 39332890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 55631866 - 55631935
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| ||||| ||||||||||||||||||||||||||||||  | |||| |||| ||| |||||||||    
T  55631866 aatatggtcaaaataagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggaggga 55631935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 208 - 256
Target Start/End: Complemental strand, 17167801 - 17167753
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttca 256  Q
    |||||||||||||| |||||||| ||||||||||||| |||||||||||    
T  17167801 acagtggggtgttactcacaacatttttgatattataatgttaacttca 17167753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 208 - 256
Target Start/End: Complemental strand, 17173378 - 17173330
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttca 256  Q
    |||||||||||||| |||||||| ||||||||||||| |||||||||||    
T  17173378 acagtggggtgttactcacaacatttttgatattataatgttaacttca 17173330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 1981373 - 1981428
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctatt 68  Q
    |||||| |||||||||||||| |||||||| || ||||||||||||||| ||||||    
T  1981373 aatatggtcaaagtaagttagatcaaaattacaaattttcaaatggatcgtctatt 1981428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 23605893 - 23605948
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctatt 68  Q
    ||||||||||||||||| ||||||||||||| | |||||||||| |||||| ||||    
T  23605893 aatatgatcaaagtaagctaggtcaaaattgtaaattttcaaatagatcatttatt 23605948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 208 - 296
Target Start/End: Complemental strand, 37775757 - 37775670
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttcaccnnnnnnnnttattttaatgacttcaccatagaattttc 296  Q
    |||||||||||||| |||||||| |||| ||||||||||| ||||||||||        | ||||||||||||||||| ||||||||||    
T  37775757 acagtggggtgttactcacaacatttttaatattatagtgctaacttcacc-aaaaaaatcattttaatgacttcaccgtagaattttc 37775670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 39171030 - 39170963
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggagg 80  Q
    |||||| ||||| ||||||||||||||||||||||||||||||  | |||| |||| ||| |||||||    
T  39171030 aatatggtcaaaataagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagg 39170963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 46608285 - 46608218
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggagg 80  Q
    |||||| ||||||||||||||||||||||| ||||||||||||  | |||| |||| ||| |||||||    
T  46608285 aatatggtcaaagtaagttaggtcaaaatttcacattttcaaacaggtcatttattgcgggacggagg 46608218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 47834135 - 47834202
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggagg 80  Q
    |||||| ||||||||||||| ||||||||| ||||||||||||||  ||||| ||| ||| |||||||    
T  47834135 aatatggtcaaagtaagttatgtcaaaattacacattttcaaatgtgtcatccattccgggacggagg 47834202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 50684992 - 50684937
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctatt 68  Q
    ||||||||||||||||||||| ||||||||||| ||||| |||| ||| |||||||    
T  50684992 aatatgatcaaagtaagttagatcaaaattgcatatttttaaatagattatctatt 50684937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 211 - 258
Target Start/End: Original strand, 54499365 - 54499412
Alignment:
Q  211 gtggggtgttattcacaacacttttgatattatagtgttaacttcacc 258  Q
    ||||||||||| ||||||||||||||||  ||||||||||||||||||    
T  54499365 gtggggtgttactcacaacacttttgatgctatagtgttaacttcacc 54499412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 258
Target Start/End: Complemental strand, 4598080 - 4598031
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttcacc 258  Q
    |||||||||||||| ||||||||| |||||| |||||||||||||||||||    
T  4598080 acagtggggtgttactcacaacac-tttgatgttatagtgttaacttcacc 4598031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 254
Target Start/End: Complemental strand, 23761160 - 23761114
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaactt 254  Q
    |||||| ||||||| |||||||||||||||| |||||||||||||||    
T  23761160 acagtgaggtgttactcacaacacttttgatgttatagtgttaactt 23761114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 299
Target Start/End: Original strand, 30002747 - 30002837
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttcaccnnnnnnnnttattttaatgacttcaccatagaattttcctt 299  Q
    |||||| ||||||| ||||||||||||||||  || |||||||||||||||        | |||||||||||||||||||||| ||||||||    
T  30002747 acagtgaggtgttactcacaacacttttgatgctacagtgttaacttcacc-agaaaaatcattttaatgacttcaccatagagttttcctt 30002837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 258
Target Start/End: Complemental strand, 38011942 - 38011892
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttcacc 258  Q
    ||||||||||| ||||||| ||||||||||| |||||||||| ||||||||    
T  38011942 acagtggggtgctattcactacacttttgatgttatagtgttgacttcacc 38011892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 43047459 - 43047417
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    |||||| |||||||||||||||| |||||||||||||||||||    
T  43047459 aatatggtcaaagtaagttaggttaaaattgcacattttcaaa 43047417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 48380545 - 48380503
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    |||||| ||||||||||||||||||||| ||||||||||||||    
T  48380545 aatatggtcaaagtaagttaggtcaaaaatgcacattttcaaa 48380503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 31657347 - 31657416
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| |||||||||| ||||||||||||||| ||||| |||| | |||| |||| ||| |||||||||    
T  31657347 aatatggtcaaagtaagctaggtcaaaattgcaaatttttaaataggtcatttattgcgggacggaggga 31657416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 256
Target Start/End: Original strand, 19089576 - 19089624
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttca 256  Q
    |||||||||||||| |||  ||| |||||||||||||||||||||||||    
T  19089576 acagtggggtgttactcattacaattttgatattatagtgttaacttca 19089624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 28899063 - 28899131
Alignment:
Q  14 atatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    ||||| |||||||||  ||||||||||||||| |||||||||| | ||||||||| ||| || ||||||    
T  28899063 atatggtcaaagtaaactaggtcaaaattgcaaattttcaaataggtcatctattgcgggacagaggga 28899131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 258
Target Start/End: Complemental strand, 47253831 - 47253787
Alignment:
Q  214 gggtgttattcacaacacttttgatattatagtgttaacttcacc 258  Q
    |||||||| ||||||||||||||||  ||||||||||||||||||    
T  47253831 gggtgttactcacaacacttttgatgatatagtgttaacttcacc 47253787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 1377575 - 1377532
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaat 56  Q
    |||||| |||||||||| ||||||||||||||| ||||||||||    
T  1377575 aatatggtcaaagtaagataggtcaaaattgcaaattttcaaat 1377532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 6520500 - 6520442
Alignment:
Q  20 tcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacgga 78  Q
    |||||||||| ||||||||||||||| |||||||||| | |||| |||| ||| |||||    
T  6520500 tcaaagtaagctaggtcaaaattgcaaattttcaaataggtcatttattgcgggacgga 6520442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 68
Target Start/End: Original strand, 24334373 - 24334427
Alignment:
Q  14 atatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctatt 68  Q
    ||||| |||||||||  ||||||||||||||| |||||||||| | |||||||||    
T  24334373 atatggtcaaagtaaactaggtcaaaattgcaaattttcaaataggtcatctatt 24334427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 28914440 - 28914371
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| |||||||||||||||||||||||| | ||||| |||  | | || |||| |||||||||||||    
T  28914440 aatatggtcaaagtaagttaggtcaaaattgtaaattttgaaacagtttatttattgcggaacggaggga 28914371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 258
Target Start/End: Complemental strand, 49376054 - 49376005
Alignment:
Q  209 cagtggggtgttattcacaacacttttgatattatagtgttaacttcacc 258  Q
    ||||||||||||| |||| |||||||||||  |||| |||||||||||||    
T  49376054 cagtggggtgttactcacgacacttttgatgctataatgttaacttcacc 49376005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 256
Target Start/End: Complemental strand, 50764818 - 50764772
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttca 256  Q
    |||||||||||||| |||||||||||||||| |  ||||||||||||||    
T  50764818 acagtggggtgttactcacaacacttttgatgt--tagtgttaacttca 50764772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 257
Target Start/End: Original strand, 55241227 - 55241276
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttcac 257  Q
    |||||||||||||| || ||||| |||||||| |||||| ||||||||||    
T  55241227 acagtggggtgttactcgcaacaattttgataatatagtattaacttcac 55241276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 226 - 258
Target Start/End: Original strand, 29584339 - 29584371
Alignment:
Q  226 caacacttttgatattatagtgttaacttcacc 258  Q
    ||||||||||||| |||||||||||||||||||    
T  29584339 caacacttttgatgttatagtgttaacttcacc 29584371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 208 - 256
Target Start/End: Complemental strand, 32592181 - 32592133
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttca 256  Q
    ||||||| |||||| || |||||||||||||| | ||||||||||||||    
T  32592181 acagtggagtgttactctcaacacttttgatactgtagtgttaacttca 32592133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 52818683 - 52818731
Alignment:
Q  20 tcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctatt 68  Q
    ||||||||| |||||| |||||| ||||||||||||||  |||||||||    
T  52818683 tcaaagtaaattaggttaaaattacacattttcaaatgagtcatctatt 52818731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 9e-21; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 38786942 - 38787005
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacg 76  Q
    ||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||    
T  38786942 aatatgatcaaagtaagttatatcaaaattgcatattttcaaatggatcatctattacggaacg 38787005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 40883483 - 40883428
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctatt 68  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  40883483 aatatgatcaaagtaagttaggtcaaaatttcacatttttaaatggatcatctatt 40883428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 13 - 75
Target Start/End: Original strand, 49903681 - 49903743
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaac 75  Q
    |||||||||||||||| ||||||||||||| |||||||| |||||||||||||||| ||||||    
T  49903681 aatatgatcaaagtaaattaggtcaaaatttcacatttttaaatggatcatctattgcggaac 49903743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 210 - 258
Target Start/End: Original strand, 7079168 - 7079216
Alignment:
Q  210 agtggggtgttattcacaacacttttgatattatagtgttaacttcacc 258  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  7079168 agtggggtgttactcacaacacttttgatattatagtgttaacttcacc 7079216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 10648197 - 10648255
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacg 71  Q
    |||||| ||||| ||||||||||||||||| ||||||||||||| ||||||||||||||    
T  10648197 aatatggtcaaaataagttaggtcaaaattacacattttcaaatagatcatctattacg 10648255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 1821624 - 1821693
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |  |||||||| | | |||||||||    
T  1821624 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaataggccatctattgccggacggaggga 1821693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 12685894 - 12685963
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||||||||| ||| |||| ||||||||||||||||||||| || ||||||||||||| ||| |||||    
T  12685894 aatatgatcaaaataaattagatcaaaattgcacattttcaaacgggtcatctattacgggacgaaggga 12685963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 29253551 - 29253486
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacgga 78  Q
    |||||| |||||||||| ||||||||||||||| |||||||||| ||||||||||| ||| |||||    
T  29253551 aatatggtcaaagtaagctaggtcaaaattgcaaattttcaaatagatcatctattgcgggacgga 29253486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 31932174 - 31932243
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| |||||||||  ||||||||||||||| |||||||||| ||||||||||| ||| |||||||||    
T  31932174 aatatggtcaaagtaaactaggtcaaaattgcaaattttcaaatagatcatctattgcgggacggaggga 31932243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 41855717 - 41855786
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| |||||||||| ||||||||||||||| |||||||||| | |||| |||||||| |||||||||    
T  41855717 aatatggtcaaagtaagctaggtcaaaattgcaaattttcaaataggtcatttattacgggacggaggga 41855786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 44452267 - 44452198
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||  |||||||| ||| || ||||||    
T  44452267 aatatggtcaaagtaagttaggtcaaaattacacattttcaaatgggacatctattgcgggacagaggga 44452198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 45299390 - 45299321
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| ||||||||||||||||||||||||||||||||||||  | |||| |||| ||| |||||||||    
T  45299390 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggaggga 45299321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 6017445 - 6017512
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggagg 80  Q
    |||||| |||||||||||||| |||||||||||||||||||||  |||||| |||| ||| |||||||    
T  6017445 aatatggtcaaagtaagttagatcaaaattgcacattttcaaacagatcatttattgcgggacggagg 6017512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 10100509 - 10100551
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  10100509 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 10100551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 10124181 - 10124139
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  10124181 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 10124139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 208 - 258
Target Start/End: Original strand, 11742442 - 11742492
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttcacc 258  Q
    |||||||||||||| | ||||||||||||||| ||||||||||||||||||    
T  11742442 acagtggggtgttacttacaacacttttgataatatagtgttaacttcacc 11742492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 79
Target Start/End: Complemental strand, 26543940 - 26543874
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggag 79  Q
    |||||| |||||||||||||||||||||||| |||||||||||  |||||| |||| ||| ||||||    
T  26543940 aatatggtcaaagtaagttaggtcaaaattgtacattttcaaacagatcatttattgcgggacggag 26543874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 208 - 258
Target Start/End: Complemental strand, 47279273 - 47279223
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttcacc 258  Q
    |||||||||||||| ||||||||||||||||| |||| |||||||||||||    
T  47279273 acagtggggtgttactcacaacacttttgatagtataatgttaacttcacc 47279223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 8251145 - 8251214
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| |||||||||||||| |||||||||||||||||||||  | |||| |||| ||| |||||||||    
T  8251145 aatatggtcaaagtaagttagatcaaaattgcacattttcaaacaggtcatttattgcgggacggaggga 8251214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 257
Target Start/End: Complemental strand, 48620721 - 48620672
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttcac 257  Q
    |||||||||||||| |||||||||||||||| ||||| ||||||||||||    
T  48620721 acagtggggtgttactcacaacacttttgatgttatattgttaacttcac 48620672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 52688594 - 52688547
Alignment:
Q  20 tcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctatt 68  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  52688594 tcaaagtaagttaggtcaaaattccacattttcaaat-gatcatctatt 52688547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 257
Target Start/End: Complemental strand, 3535009 - 3534967
Alignment:
Q  215 ggtgttattcacaacacttttgatattatagtgttaacttcac 257  Q
    ||||||| |||||||||||||||| ||||||||||||||||||    
T  3535009 ggtgttactcacaacacttttgatgttatagtgttaacttcac 3534967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 2126724 - 2126655
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| ||||||||| ||||||||||||| |||||||| ||||   ||||||||| ||||| |||||||    
T  2126724 aatatggtcaaagtaaattaggtcaaaattacacatttttaaataagtcatctattgcggaatggaggga 2126655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 5606387 - 5606456
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| | |||||||||||| |||||||||||| ||||||||| | |||| |||| ||| |||||||||    
T  5606387 aatatggttaaagtaagttagatcaaaattgcactttttcaaataggtcatttattgcgggacggaggga 5606456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 8048744 - 8048813
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| ||||| |||| ||||||||||||||| |||||||||| | ||||||||| | | |||||||||    
T  8048744 aatatggtcaaaataagctaggtcaaaattgcaaattttcaaataggtcatctattgcaggacggaggga 8048813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 28490232 - 28490163
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| |||||||||  || |||||||||||| |||||||||| | ||||||||| ||| |||||||||    
T  28490232 aatatggtcaaagtaaactatgtcaaaattgcaaattttcaaataggtcatctattgcgggacggaggga 28490163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 41414275 - 41414206
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| |||||||||| ||||||||||||||| |||||||||| | | ||||||| | | |||||||||    
T  41414275 aatatggtcaaagtaagctaggtcaaaattgcaaattttcaaataggtaatctattgcaggacggaggga 41414206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 44240591 - 44240522
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| |||||||||| ||||||||||||||| ||||| |||| | |||| |||| ||| |||||||||    
T  44240591 aatatggtcaaagtaagctaggtcaaaattgcaaatttttaaataggtcatttattgcgggacggaggga 44240522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 48312100 - 48312032
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||| ||||||| ||||||| | ||||||||||||||||||||||| ||||||||| ||| || ||||||    
T  48312100 aatacgatcaaaataagttaagccaaaattgcacattttcaaatgg-tcatctattgcgggactgaggga 48312032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 50014557 - 50014626
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| |||||||||| ||| ||||||||||| ||||||||||   |||||||| |||| |||||||||    
T  50014557 aatatggtcaaagtaagctagatcaaaattgcaaattttcaaataagtcatctatgacgggacggaggga 50014626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 52749353 - 52749284
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| ||||| |||||||||| |||||||||||||||||||  | |||| |||| ||| |||||||||    
T  52749353 aatatggtcaaaataagttaggtaaaaattgcacattttcaaacaggtcatttattgcgggacggaggga 52749284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 254
Target Start/End: Complemental strand, 3309226 - 3309186
Alignment:
Q  214 gggtgttattcacaacacttttgatattatagtgttaactt 254  Q
    |||||||| |||||||||||||||| |||||||||||||||    
T  3309226 gggtgttactcacaacacttttgatgttatagtgttaactt 3309186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 69
Target Start/End: Original strand, 27581065 - 27581121
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctatta 69  Q
    ||||||||||||||| |||||||||||||| || ||| ||||||  |||||||||||    
T  27581065 aatatgatcaaagtatgttaggtcaaaattacatattgtcaaataaatcatctatta 27581121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 208 - 304
Target Start/End: Complemental strand, 1547371 - 1547276
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttcaccnnnnnnnnttattttaatgacttcaccatagaattttccttataaa 304  Q
    ||||||| |||||| |||||||| |||| || |||||||||||||||||||        | ||| | ||||||||||||||||||||||||| ||||    
T  1547371 acagtggagtgttactcacaacattttttatgttatagtgttaacttcacc-agaaaagtcattctcatgacttcaccatagaattttccttttaaa 1547276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 3138676 - 3138618
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacgg 72  Q
    |||||| ||||||||||||| |||||||   ||||||||||||||| |||||||||||||    
T  3138676 aatatggtcaaagtaagttatgtcaaaaacacacattttcaaatgg-tcatctattacgg 3138618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 48389138 - 48389095
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaat 56  Q
    |||||| |||||||||| ||||||||||||||| ||||||||||    
T  48389138 aatatggtcaaagtaagctaggtcaaaattgcaaattttcaaat 48389095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 7075326 - 7075368
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    |||||| |||||||||||||| |||||||||||| ||||||||    
T  7075326 aatatggtcaaagtaagttagatcaaaattgcacgttttcaaa 7075368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 258
Target Start/End: Complemental strand, 32216139 - 32216089
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttcacc 258  Q
    ||||||| |||||| |||| ||| ||||||| |||||||||||||||||||    
T  32216139 acagtggtgtgttactcactacatttttgatgttatagtgttaacttcacc 32216089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 300
Target Start/End: Complemental strand, 28012080 - 28012047
Alignment:
Q  267 ttattttaatgacttcaccatagaattttcctta 300  Q
    ||||| ||||||||||||||||||||||||||||    
T  28012080 ttattctaatgacttcaccatagaattttcctta 28012047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 43453161 - 43453230
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| ||||| ||||||||||||||||| ||||| | ||||||  ||||||| | ||| |||||||||    
T  43453161 aatatggtcaaaataagttaggtcaaaattacacatctgcaaatgagtcatctaatgcgggacggaggga 43453230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 208 - 256
Target Start/End: Original strand, 9903146 - 9903194
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttca 256  Q
    |||| ||||||||| |||| ||| ||||||| |||||||||||||||||    
T  9903146 acagcggggtgttactcactacagttttgatgttatagtgttaacttca 9903194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 258
Target Start/End: Complemental strand, 16415723 - 16415679
Alignment:
Q  214 gggtgttattcacaacacttttgatattatagtgttaacttcacc 258  Q
    |||||||| |||| |||||||||||  ||||||||||||||||||    
T  16415723 gggtgttactcactacacttttgatgctatagtgttaacttcacc 16415679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 33730190 - 33730234
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatg 57  Q
    |||||| | ||||||||||| ||||||||| ||||||||||||||    
T  33730190 aatatggttaaagtaagttatgtcaaaattacacattttcaaatg 33730234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 269 - 305
Target Start/End: Complemental strand, 42721063 - 42721027
Alignment:
Q  269 attttaatgacttcaccatagaattttccttataaaa 305  Q
    ||||| ||||||||||||||||||||||| |||||||    
T  42721063 attttcatgacttcaccatagaattttccatataaaa 42721027  T

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Target: scaffold0204 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 23941 - 24010
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||| ||||||||||||||||||||||||||||||||||||||||  ||||||||| ||| |||||||||    
T  23941 aatacgatcaaagtaagttaggtcaaaattgcacattttcaaatgtgtcatctattgcgggacggaggga 24010  T

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Target: chr8 (Bit Score: 50; Significance: 1e-19; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 44717368 - 44717299
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||||| ||| ||| |||||||||    
T  44717368 aatatgatcaaagtaagttagttcaaaattacacattttcaaatggatcatccattgcgggacggaggga 44717299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 82
Target Start/End: Complemental strand, 3466349 - 3466286
Alignment:
Q  19 atcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||||| ||| |||||||||    
T  3466349 atcaaagtaagttaggtcaaaattgcgcattttcaaatgggtcatctattgcgggacggaggga 3466286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 8496875 - 8496941
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggag 79  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||| | ||||||    
T  8496875 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaatgggtcaactattacaggacggag 8496941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 4960223 - 4960158
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacgga 78  Q
    |||||| |||||||||| ||||||||||||||| |||||||||| ||||||||||||||| |||||    
T  4960223 aatatggtcaaagtaagctaggtcaaaattgcaaattttcaaatagatcatctattacgggacgga 4960158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 20671328 - 20671259
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||| ||  |||||||||    
T  20671328 aatatggtcaaagtaagttaggtcaaaattacacattttcaaattgatcatctattgcgcgacggaggga 20671259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 40645681 - 40645612
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||  |||||||| ||| |||||||||    
T  40645681 aatatgatcaaagtaagttaggtcaaaattgaaaattttcaaatgggccatctattgcgggacggaggga 40645612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 17523877 - 17523822
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctatt 68  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||| |||||||||    
T  17523877 aatatgatcaaagtaagttaggttaaaactgcacattttcaaatgggtcatctatt 17523822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 11756848 - 11756779
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| |||||||||||||||||||||||||| ||||||||||   ||||||||| |||||| ||||||    
T  11756848 aatatggtcaaagtaagttaggtcaaaattgcaaattttcaaataagtcatctattgcggaacagaggga 11756779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 28583292 - 28583361
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| ||||||||| ||||||||||||||||||||||||||  | ||||||||| ||| |||||||||    
T  28583292 aatatgctcaaagtaaattaggtcaaaattgcacattttcaaaaaggtcatctattgcgggacggaggga 28583361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 44887704 - 44887773
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| ||||| ||||| ||||||||||||||||||||||||| |||||| |||| ||| |||||||||    
T  44887704 aatatggtcaaactaagtcaggtcaaaattgcacattttcaaatagatcatttattgcgggacggaggga 44887773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 8123714 - 8123658
Alignment:
Q  26 taagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    ||||||||||||||||| |||||||| |||||||||||||||| | |||||||||||    
T  8123714 taagttaggtcaaaattacacatttttaaatggatcatctattgcagaacggaggga 8123658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 30464504 - 30464428
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggagggattaactt 89  Q
    |||||| ||||||||||||||||||||||||||||||||||||    |||| |||| ||| ||||||||| ||||||    
T  30464504 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacatgtcatttattgcgggacggagggagtaactt 30464428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 208 - 256
Target Start/End: Original strand, 36695069 - 36695117
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttca 256  Q
    |||||||||||||| |||||||| |||||||||||||||||||||||||    
T  36695069 acagtggggtgttactcacaacatttttgatattatagtgttaacttca 36695117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 208 - 258
Target Start/End: Complemental strand, 465929 - 465879
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttcacc 258  Q
    |||||||||||||| |||||||||||||||| |||| ||||||||||||||    
T  465929 acagtggggtgttactcacaacacttttgatgttatcgtgttaacttcacc 465879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 4327108 - 4327150
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  4327108 aatatgatcaaagtaagttagatcaaaattgcacattttcaaa 4327150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 20 - 82
Target Start/End: Original strand, 14378682 - 14378744
Alignment:
Q  20 tcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    ||||||||||||||||||||||||||||||||||||   ||||| |||| ||| |||||||||    
T  14378682 tcaaagtaagttaggtcaaaattgcacattttcaaacctatcatttattgcgggacggaggga 14378744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 25691586 - 25691628
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  25691586 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 25691628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 208 - 254
Target Start/End: Complemental strand, 38644065 - 38644019
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaactt 254  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||    
T  38644065 acagtggggtgttactcacaacacttttgatgttatagtgttaactt 38644019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 14584196 - 14584265
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    ||||||||||||||||| ||| ||||||||  | |||||||||| |||||||||||| || |||||||||    
T  14584196 aatatgatcaaagtaagctagatcaaaattataaattttcaaatagatcatctattatgggacggaggga 14584265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 44947089 - 44947021
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    ||||| ||||||||||  ||||||||||||||||||||| |||||| ||||||||| ||| |||||||||    
T  44947089 aatataatcaaagtaaaataggtcaaaattgcacatttttaaatgggtcatctattgcgg-acggaggga 44947021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 210 - 258
Target Start/End: Complemental strand, 11727109 - 11727061
Alignment:
Q  210 agtggggtgttattcacaacacttttgatattatagtgttaacttcacc 258  Q
    |||||||||||| | |||||||||||||| |||||||||||||||||||    
T  11727109 agtggggtgttacttacaacacttttgatgttatagtgttaacttcacc 11727061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 210 - 258
Target Start/End: Complemental strand, 13307708 - 13307660
Alignment:
Q  210 agtggggtgttattcacaacacttttgatattatagtgttaacttcacc 258  Q
    |||| ||||||| |||||||||||||||| |||||||||||||||||||    
T  13307708 agtgaggtgttactcacaacacttttgatgttatagtgttaacttcacc 13307660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 38842235 - 38842167
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcaca-ttttcaaatggatcatctattacggaacggagg 80  Q
    |||||||||||||||||||||||||||||| |||| ||||||||  | |||| |||||||| |||||||    
T  38842235 aatatgatcaaagtaagttaggtcaaaattacacatttttcaaacaggtcatttattacgggacggagg 38842167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 25009216 - 25009161
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctatt 68  Q
    |||||| ||||||||| ||||||||||||||||||||||||||  |||||| ||||    
T  25009216 aatatggtcaaagtaaattaggtcaaaattgcacattttcaaacagatcatttatt 25009161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 29917917 - 29917971
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctatt 68  Q
    |||||| ||||| ||||||||||||||||| |||||||| ||||||||||||||||    
T  29917917 aatatggtcaaaataagttaggtcaaaattacacatttt-aaatggatcatctatt 29917971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 37094204 - 37094137
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggagg 80  Q
    |||||| |||||||||| ||||||||||||||| |||||||||| | |||| |||| ||| |||||||    
T  37094204 aatatggtcaaagtaagctaggtcaaaattgcaaattttcaaataggtcatttattgcgggacggagg 37094137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 40035359 - 40035304
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctatt 68  Q
    |||||||| ||| ||| |||| ||||||||||| ||||||||||||||||||||||    
T  40035359 aatatgattaaactaaattagatcaaaattgcaaattttcaaatggatcatctatt 40035304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 208 - 258
Target Start/End: Complemental strand, 40862507 - 40862456
Alignment:
Q  208 acagtggggtgttattcacaacactttt-gatattatagtgttaacttcacc 258  Q
    |||||||||||||| |||||||| |||| |||||||||||||||||||||||    
T  40862507 acagtggggtgttactcacaacattttttgatattatagtgttaacttcacc 40862456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 44039897 - 44039842
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctatt 68  Q
    |||||||||||| ||||  || ||||||||||||||||||||||||||||| ||||    
T  44039897 aatatgatcaaactaagccagatcaaaattgcacattttcaaatggatcatttatt 44039842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 66992 - 66942
Alignment:
Q  19 atcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctatta 69  Q
    |||||| ||| ||| ||||||||| ||||||||||||||||||||||||||    
T  66992 atcaaaataaattatgtcaaaattacacattttcaaatggatcatctatta 66942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 258
Target Start/End: Complemental strand, 9864235 - 9864185
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttcacc 258  Q
    |||||||||||||| |||||||| |||||||| ||||||||||| ||||||    
T  9864235 acagtggggtgttactcacaacatttttgatactatagtgttaatttcacc 9864185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 21132917 - 21132959
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    |||||| ||||||||||||| ||||||||||||||||||||||    
T  21132917 aatatggtcaaagtaagttaagtcaaaattgcacattttcaaa 21132959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 258
Target Start/End: Original strand, 27082941 - 27082991
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttcacc 258  Q
    |||||||||||||| |||| |||||||||||  ||||||||||||||||||    
T  27082941 acagtggggtgttactcactacacttttgatgctatagtgttaacttcacc 27082991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 23437802 - 23437871
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| |||||| || ||||||||||||||||||||||||||  | |||| |||| ||| |||||||||    
T  23437802 aatatggtcaaagcaaattaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggaggga 23437871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 30653432 - 30653367
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacgga 78  Q
    |||||| |||||||||||||| | ||||||||||||||| |||| |  |||||||||||| |||||    
T  30653432 aatatggtcaaagtaagttagattaaaattgcacatttttaaattgggcatctattacgggacgga 30653367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 761622 - 761546
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggagggattaactt 89  Q
    |||||| ||||||||| ||||||||||||| ||||||||||||  | |||| |||| ||| || |||||| ||||||    
T  761622 aatatggtcaaagtaaattaggtcaaaattacacattttcaaacaggtcatttattgcgggacagagggagtaactt 761546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 256
Target Start/End: Complemental strand, 12876196 - 12876148
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttca 256  Q
    ||||| |||||||| |||||||| |||| ||||||||||||||||||||    
T  12876196 acagttgggtgttactcacaacattttttatattatagtgttaacttca 12876148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 211 - 258
Target Start/End: Original strand, 24823378 - 24823425
Alignment:
Q  211 gtggggtgttattcacaacacttttgatattatagtgttaacttcacc 258  Q
    |||||||||||  |  ||||||||||||||||||||||||||||||||    
T  24823378 gtggggtgttacacttaacacttttgatattatagtgttaacttcacc 24823425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 9420745 - 9420811
Alignment:
Q  16 atgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    ||||||||| || ||||| |||| | ||||||||||||||| ||||||||||||  |||| ||||||    
T  9420745 atgatcaaaatatgttagatcaataatgcacattttcaaatagatcatctattatagaacagaggga 9420811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 254
Target Start/End: Original strand, 16446978 - 16447024
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaactt 254  Q
    |||||||||||||| |||| ||| ||||||| |||||||||||||||    
T  16446978 acagtggggtgttactcactacaattttgatgttatagtgttaactt 16447024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 254
Target Start/End: Original strand, 34952134 - 34952180
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaactt 254  Q
    |||||||| ||||| ||||||||||||||||  ||||||||||||||    
T  34952134 acagtgggctgttactcacaacacttttgatgatatagtgttaactt 34952180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 258
Target Start/End: Original strand, 37970622 - 37970672
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttcacc 258  Q
    |||||||||||||| |||  ||| ||||||| |||||||||||||||||||    
T  37970622 acagtggggtgttactcattacatttttgatgttatagtgttaacttcacc 37970672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 2026637 - 2026600
Alignment:
Q  20 tcaaagtaagttaggtcaaaattgcacattttcaaatg 57  Q
    |||||||||||||||||||||||  |||||||||||||    
T  2026637 tcaaagtaagttaggtcaaaattaaacattttcaaatg 2026600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 7475374 - 7475443
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    ||||||||||||||||| ||| | ||||||||| ||||| ||||   ||||||||| |||||| ||||||    
T  7475374 aatatgatcaaagtaagctagattaaaattgcaaatttttaaatacgtcatctattgcggaactgaggga 7475443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 29616315 - 29616360
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatgg 58  Q
    ||||||||||||||||||||| ||||||||  | ||||||||||||    
T  29616315 aatatgatcaaagtaagttagatcaaaatttaatattttcaaatgg 29616360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 258
Target Start/End: Complemental strand, 43025787 - 43025739
Alignment:
Q  210 agtggggtgttattcacaacacttttgatattatagtgttaacttcacc 258  Q
    |||||||| ||| ||||||||||||||||| ||||  ||||||||||||    
T  43025787 agtggggtattaatcacaacacttttgatactatatcgttaacttcacc 43025739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 36819688 - 36819619
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||||||||||||||||||||||||||||||||||||||||  | |||| |||| |||||||||||||    
T  36819688 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcggaacggaggga 36819619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 47713431 - 47713496
Alignment:
Q  20 tcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggagggatta 85  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| || || |||||||||    
T  47713431 tcaaagtaagttaggtcaaaattgcacattttcaaatgggtcatctattatgggacagagggatta 47713496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 18756664 - 18756606
Alignment:
Q  20 tcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacgga 78  Q
    |||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||    
T  18756664 tcaaagtaagataggtcaaaattgcatattttcaaatgggtcatctattacggaacgga 18756606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 13 - 79
Target Start/End: Complemental strand, 38850774 - 38850708
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggag 79  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||  |||||||||    
T  38850774 aatatggtcaaagtaagttaggtcaaaattacacattttcaaatgggtcatctattgtggaacggag 38850708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 16807138 - 16807207
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| ||||||||||||||||||||||||||||||||||||  | |||| |||||||| |||||||||    
T  16807138 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggaggga 16807207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 37101018 - 37101087
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| ||||||||||||||||||||||| ||||||||||||| | ||||||||| ||| |||||||||    
T  37101018 aatatggtcaaagtaagttaggtcaaaattacacattttcaaataggtcatctattgcgggacggaggga 37101087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 38069123 - 38069054
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| ||||||||||||||||||||||||||||||||||||  | |||| |||| |||||||||||||    
T  38069123 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcggaacggaggga 38069054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 13 - 78
Target Start/End: Original strand, 40818689 - 40818754
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacgga 78  Q
    |||||| ||| |||||||||| |||||||||||||||||||||| ||||||||||||||| |||||    
T  40818689 aatatggtcagagtaagttagatcaaaattgcacattttcaaatagatcatctattacgggacgga 40818754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 82
Target Start/End: Original strand, 31496644 - 31496706
Alignment:
Q  20 tcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||||||||||||||||||||| ||||||||||||| || ||||||||||  |||||||||    
T  31496644 tcaaagtaagttaggtcaaaattgtacattttcaaatgaattatctattacgagacggaggga 31496706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 208 - 257
Target Start/End: Original strand, 5657579 - 5657628
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttcac 257  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  5657579 acagtggggtgttactcacaacacttttgatgttatagtgttaacttcac 5657628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 9173328 - 9173397
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| ||||||||||||||||||||||| ||| |||| |||| | ||||||||| |||||||||||||    
T  9173328 aatatggtcaaagtaagttaggtcaaaattacacgtttttaaattggtcatctattccggaacggaggga 9173397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 28016187 - 28016119
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| |||||||||||||| |||||||||||||||||||||||| ||||| ||| | |||||||||||    
T  28016187 aatatggtcaaagtaagttagatcaaaattgcacattttcaaatgggtcatc-attgcagaacggaggga 28016119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 30462213 - 30462282
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| ||||||||||||| ||||||||||||||||||||||  |||||| |||| ||| |||||||||    
T  30462213 aatatggtcaaagtaagttaagtcaaaattgcacattttcaaacagatcatttattgcgggacggaggga 30462282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 32222622 - 32222553
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||| ||| ||||||| |||| ||||||||||||||||| | |||| |||||||||||||||||||||||    
T  32222622 aatacgattaaagtaaattagatcaaaattgcacattttgagatgggtcatctattacggaacggaggga 32222553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 46242472 - 46242516
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatg 57  Q
    |||||| ||||||||||||||||||||||||||||||||||||||    
T  46242472 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaatg 46242516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 208 - 258
Target Start/End: Original strand, 27421477 - 27421527
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttcacc 258  Q
    ||||||| |||||| |||||||||||||||| |||||||||||||||||||    
T  27421477 acagtggagtgttactcacaacacttttgatgttatagtgttaacttcacc 27421527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 68
Target Start/End: Original strand, 25274011 - 25274064
Alignment:
Q  15 tatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctatt 68  Q
    |||| ||||||||||||||||||||||||||||||||||||  |||||| ||||    
T  25274011 tatggtcaaagtaagttaggtcaaaattgcacattttcaaacagatcatttatt 25274064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 19817370 - 19817314
Alignment:
Q  20 tcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacg 76  Q
    |||||||||||||||| ||||||  |||||||||||| ||||||||||||| |||||    
T  19817370 tcaaagtaagttaggttaaaattatacattttcaaatagatcatctattacagaacg 19817314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 214 - 258
Target Start/End: Complemental strand, 43686098 - 43686054
Alignment:
Q  214 gggtgttattcacaacacttttgatattatagtgttaacttcacc 258  Q
    |||||||| |||||||| |||||||||||||||||||||||||||    
T  43686098 gggtgttactcacaacatttttgatattatagtgttaacttcacc 43686054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 5842189 - 5842142
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggat 60  Q
    |||||||||||||||| |||| | ||||||||||||||||||||||||    
T  5842189 aatatgatcaaagtaaattagattaaaattgcacattttcaaatggat 5842142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 208 - 255
Target Start/End: Complemental strand, 8861348 - 8861301
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttc 255  Q
    |||||||||||||||||| ||||||||||||  |||||||||||||||    
T  8861348 acagtggggtgttattcataacacttttgatgctatagtgttaacttc 8861301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 208 - 299
Target Start/End: Complemental strand, 30055590 - 30055499
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttcaccnnnnnnnnttattttaatgacttcaccatagaattttcctt 299  Q
    |||||||||||||| |||  ||| ||||||||||||||||||||||||| |        | ||| | |||||||||||||||||||||||||    
T  30055590 acagtggggtgttactcattacaattttgatattatagtgttaacttcatcaaaaaaagtcattcttatgacttcaccatagaattttcctt 30055499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 38441885 - 38441830
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctatt 68  Q
    |||||| |||||||||||||||| |||||| ||||||||||||||  |||||||||    
T  38441885 aatatggtcaaagtaagttaggtaaaaattacacattttcaaatgagtcatctatt 38441830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 4620139 - 4620097
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    |||||| ||||||||||||||||||||||| ||||||||||||    
T  4620139 aatatggtcaaagtaagttaggtcaaaattacacattttcaaa 4620097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 258
Target Start/End: Complemental strand, 12165815 - 12165765
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttcacc 258  Q
    |||||||||||||| |||||||||||| |||  ||||||||||||||||||    
T  12165815 acagtggggtgttactcacaacactttggatgctatagtgttaacttcacc 12165765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 258
Target Start/End: Complemental strand, 29173603 - 29173553
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttcacc 258  Q
    ||||||| |||||| ||||||||||||||||| || |||||||||||||||    
T  29173603 acagtggagtgttactcacaacacttttgatactacagtgttaacttcacc 29173553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 82
Target Start/End: Complemental strand, 33376840 - 33376778
Alignment:
Q  20 tcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||||||||||||||||||||  | | |||||||||||||||||||| ||| || ||||||    
T  33376840 tcaaagtaagttaggtcaaaattaaaaaatttcaaatggatcatctattgcgggacagaggga 33376778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 254
Target Start/End: Original strand, 34362246 - 34362292
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaactt 254  Q
    |||||||||||||| ||||||||||||||||  ||||||||||||||    
T  34362246 acagtggggtgttactcacaacacttttgatgctatagtgttaactt 34362292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 35693822 - 35693864
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    |||||| || |||||||||||||||||||||||||||||||||    
T  35693822 aatatggtcgaagtaagttaggtcaaaattgcacattttcaaa 35693864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 9136654 - 9136723
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| ||||| |||  |||||||||||| |||||| |||||||||||||||||| ||| | |||||||    
T  9136654 aatatggtcaaaataaactaggtcaaaattacacattatcaaatggatcatctattgcgggatggaggga 9136723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 208 - 298
Target Start/End: Original strand, 31579167 - 31579256
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttcaccnnnnnnnnttattttaatgacttcaccatagaattttcct 298  Q
    |||||||||||||| |||  ||| ||||||| |||||||||||||||||||        ||||| | ||||||||||||||||||||||||    
T  31579167 acagtggggtgttactcattacatttttgatgttatagtgttaacttcacc-aaaaaaattattcttatgacttcaccatagaattttcct 31579256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 40232000 - 40231931
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| ||||| ||| ||||||||||||||||||||||||||  | | || |||||||| |||||||||    
T  40232000 aatatggtcaaaataaattaggtcaaaattgcacattttcaaacaggttatttattacgggacggaggga 40231931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 258
Target Start/End: Complemental strand, 4582980 - 4582932
Alignment:
Q  210 agtggggtgttattcacaacacttttgatattatagtgttaacttcacc 258  Q
    |||||||||||| |||||||| |||||||| |||||| |||||||||||    
T  4582980 agtggggtgttactcacaacatttttgatactatagtattaacttcacc 4582932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 256
Target Start/End: Complemental strand, 22687302 - 22687254
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttca 256  Q
    ||||||| |||||| |||||||| ||||||| |||||||||||||||||    
T  22687302 acagtggagtgttactcacaacatttttgatgttatagtgttaacttca 22687254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 210 - 257
Target Start/End: Complemental strand, 6546580 - 6546533
Alignment:
Q  210 agtggggtgttattcacaacacttttgatattatagtgttaacttcac 257  Q
    |||||||||||| || |||||||||||||  |||||||||||||||||    
T  6546580 agtggggtgttactcgcaacacttttgatgctatagtgttaacttcac 6546533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 211 - 258
Target Start/End: Complemental strand, 26980383 - 26980336
Alignment:
Q  211 gtggggtgttattcacaacacttttgatattatagtgttaacttcacc 258  Q
    ||||||||||| ||||||||||||||||  |||| |||||||||||||    
T  26980383 gtggggtgttactcacaacacttttgatgctataatgttaacttcacc 26980336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 38259556 - 38259501
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctatt 68  Q
    |||||||||||||||| |||| || |||||||| |||||||| | |||||||||||    
T  38259556 aatatgatcaaagtaaattagatcgaaattgcaaattttcaactagatcatctatt 38259501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 41007948 - 41008003
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctatt 68  Q
    |||||| ||||||||||||||||||||||| || ||||| |||||  |||||||||    
T  41007948 aatatggtcaaagtaagttaggtcaaaattacatatttttaaatgagtcatctatt 41008003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 258
Target Start/End: Original strand, 12390728 - 12390778
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttcacc 258  Q
    |||||||| ||||| |||  ||||||||||| |||||||||||||||||||    
T  12390728 acagtgggatgttactcattacacttttgatgttatagtgttaacttcacc 12390778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 258
Target Start/End: Complemental strand, 21991699 - 21991649
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttcacc 258  Q
    |||||||||||||| || ||||| |||||||  ||||||||||||||||||    
T  21991699 acagtggggtgttactcgcaacaattttgatgctatagtgttaacttcacc 21991649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 257
Target Start/End: Complemental strand, 44598419 - 44598378
Alignment:
Q  216 gtgttattcacaacacttttgatattatagtgttaacttcac 257  Q
    |||||| |||||||| ||||||||||||||| ||||||||||    
T  44598419 gtgttactcacaacatttttgatattatagtattaacttcac 44598378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 258
Target Start/End: Complemental strand, 23111251 - 23111203
Alignment:
Q  210 agtggggtgttattcacaacacttttgatattatagtgttaacttcacc 258  Q
    ||||| |||||| |||||| | ||||||| |||||||||||||||||||    
T  23111251 agtggtgtgttactcacaatatttttgatgttatagtgttaacttcacc 23111203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 258
Target Start/End: Original strand, 48928396 - 48928444
Alignment:
Q  210 agtggggtgttattcacaacacttttgatattatagtgttaacttcacc 258  Q
    ||||||||| || |||| ||||||||||| |||||||||| ||||||||    
T  48928396 agtggggtgctactcactacacttttgatgttatagtgttgacttcacc 48928444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 258
Target Start/End: Original strand, 48928663 - 48928711
Alignment:
Q  210 agtggggtgttattcacaacacttttgatattatagtgttaacttcacc 258  Q
    ||||||||| || |||| ||||||||||| |||||||||| ||||||||    
T  48928663 agtggggtgctactcactacacttttgatgttatagtgttgacttcacc 48928711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 1e-19; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 24949607 - 24949538
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||| |||||||||||||||| |||||||||||||||||||||||| ||||||||| ||| |||||||||    
T  24949607 aatacgatcaaagtaagttagatcaaaattgcacattttcaaatgggtcatctattgcgggacggaggga 24949538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 208 - 258
Target Start/End: Complemental strand, 8513321 - 8513271
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttcacc 258  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  8513321 acagtggggtgttactcacaacacttttgatattatagtgttaacttcacc 8513271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 20 - 82
Target Start/End: Original strand, 16661605 - 16661667
Alignment:
Q  20 tcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| ||| || ||||||    
T  16661605 tcaaagtaagttaggtcaaaattacacattttcaaatggatcatctattgcgggactgaggga 16661667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 10109414 - 10109467
Alignment:
Q  20 tcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacgga 73  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  10109414 tcaaagtaagttaggtcaaaattgcacatttttaaatggatcatctattgcgga 10109467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 17496314 - 17496383
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| ||||||||||||||||||||||||||||||||||||  |||||| |||| ||| |||||||||    
T  17496314 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagatcatttattgcgggacggaggga 17496383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 4890122 - 4890177
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctatt 68  Q
    |||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  4890122 aatatggtcaaagtaaattaggtcaaaattgcacatttttaaatggatcatctatt 4890177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 82
Target Start/End: Original strand, 2667328 - 2667390
Alignment:
Q  20 tcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    ||||||||||||||||||||||||||||||||||||  |||||| |||| ||| |||||||||    
T  2667328 tcaaagtaagttaggtcaaaattgcacattttcaaacagatcatttattgcgggacggaggga 2667390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 6142503 - 6142545
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  6142503 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa 6142545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 29515022 - 29515064
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  29515022 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa 29515064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 24798542 - 24798611
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| ||||||||||||||||||||||||||||||||||||  | |||| |||| ||| |||||||||    
T  24798542 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggaggga 24798611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 30699333 - 30699264
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| ||||||||||||||||||||||| |||||||| |||  |||||| |||| |||||||||||||    
T  30699333 aatatggtcaaagtaagttaggtcaaaattacacatttttaaacagatcatttattgcggaacggaggga 30699264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 208 - 256
Target Start/End: Complemental strand, 29182251 - 29182203
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttca 256  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||||    
T  29182251 acagtggggtgttactcacaacacttttgatgttatagtgttaacttca 29182203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 13358581 - 13358514
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggagg 80  Q
    |||||| ||||||||||||||||||||||| |||||||||||||   |||||||||  ||||||||||    
T  13358581 aatatggtcaaagtaagttaggtcaaaattacacattttcaaataagtcatctattgtggaacggagg 13358514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 210 - 257
Target Start/End: Original strand, 33893100 - 33893147
Alignment:
Q  210 agtggggtgttattcacaacacttttgatattatagtgttaacttcac 257  Q
    |||||||||||| |||||||||||||||| ||||||||||||||||||    
T  33893100 agtggggtgttactcacaacacttttgatgttatagtgttaacttcac 33893147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 2141640 - 2141598
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  2141640 aatatgatcaaagtaagttaggtcaaaattgtacattttcaaa 2141598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 208 - 258
Target Start/End: Original strand, 4318919 - 4318969
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttcacc 258  Q
    |||||||||||||| ||| |||||||||||| |||||||||||||||||||    
T  4318919 acagtggggtgttactcataacacttttgatgttatagtgttaacttcacc 4318969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 208 - 258
Target Start/End: Complemental strand, 6088996 - 6088946
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttcacc 258  Q
    ||||||||| |||| ||||||||||||||||| ||||||||||||||||||    
T  6088996 acagtggggcgttactcacaacacttttgatactatagtgttaacttcacc 6088946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 6188652 - 6188694
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  6188652 aatatgctcaaagtaagttaggtcaaaattgcacattttcaaa 6188694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 24825237 - 24825195
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  24825237 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 24825195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 2397842 - 2397773
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| ||||||||| ||||||||||||||||||||||||||  | |||| |||| ||| |||||||||    
T  2397842 aatatggtcaaagtaaattaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggaggga 2397773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 29795523 - 29795454
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| | |||||||||||| |||||||||||||||||||||  |||||| |||| ||| |||||||||    
T  29795523 aatatggttaaagtaagttagatcaaaattgcacattttcaaacagatcatttattgcgggacggaggga 29795454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 31948637 - 31948706
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| ||||| ||||||| |||| |||| ||||||||||||||||||||||||| ||  |||||||||    
T  31948637 aatatggtcaaaataagttaagtcataattacacattttcaaatggatcatctattgcgagacggaggga 31948706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 32673820 - 32673755
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacgga 78  Q
    |||||| ||||| |||||||| ||||||||||| ||||| |||| ||||||||||||||| |||||    
T  32673820 aatatggtcaaaataagttagatcaaaattgcaaatttttaaatagatcatctattacgggacgga 32673755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 55
Target Start/End: Original strand, 2656673 - 2656708
Alignment:
Q  20 tcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    ||||||||||||||||||||||||||||||||||||    
T  2656673 tcaaagtaagttaggtcaaaattgcacattttcaaa 2656708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 258
Target Start/End: Original strand, 3880035 - 3880085
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttcacc 258  Q
    ||||| |||||||| ||||||||||||||||| |||| |||||||||||||    
T  3880035 acagtagggtgttactcacaacacttttgatactataatgttaacttcacc 3880085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 82
Target Start/End: Complemental strand, 31708958 - 31708896
Alignment:
Q  20 tcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    ||||||||| ||| |||||||||||||||||| |||| ||||||||||| | | |||||||||    
T  31708958 tcaaagtaaattaagtcaaaattgcacatttttaaatagatcatctattgcaggacggaggga 31708896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 208 - 301
Target Start/End: Complemental strand, 1945922 - 1945829
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttcaccnnnnnnnnttattttaatgacttcaccatagaattttccttat 301  Q
    |||||||||||||| |||  ||| ||||||| |||||||||||||||||||        | ||| | ||||||||||| |||||||||||||||    
T  1945922 acagtggggtgttactcattacatttttgatgttatagtgttaacttcaccaaaaaaagtcattcttatgacttcaccgtagaattttccttat 1945829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 32541473 - 32541542
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| ||||||||| |||||||||||||||| |||||||||  | |||| |||| ||| |||||||||    
T  32541473 aatatggtcaaagtaaattaggtcaaaattgcatattttcaaacaggtcatttattgcgggacggaggga 32541542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 35117352 - 35117307
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatgg 58  Q
    |||||| ||||||||||||| || ||||||||||||||||||||||    
T  35117352 aatatggtcaaagtaagttatgttaaaattgcacattttcaaatgg 35117307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 28483110 - 28483046
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacgg 77  Q
    |||||| | |||||||||||| |||||||||||||||||||||  |||||| |||| ||| ||||    
T  28483110 aatatggttaaagtaagttagatcaaaattgcacattttcaaacagatcatttattgcgggacgg 28483046  T

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Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 210 - 257
Target Start/End: Complemental strand, 15491701 - 15491654
Alignment:
Q  210 agtggggtgttattcacaacacttttgatattatagtgttaacttcac 257  Q
    |||||||||||| |||||||||||||||| ||| | ||||||||||||    
T  15491701 agtggggtgttactcacaacacttttgatgttacaatgttaacttcac 15491654  T

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Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 16969450 - 16969407
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaat 56  Q
    |||||| ||||||||| ||| |||||||||||||||||||||||    
T  16969450 aatatggtcaaagtaaattaagtcaaaattgcacattttcaaat 16969407  T

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Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 258
Target Start/End: Original strand, 7235130 - 7235180
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttcacc 258  Q
    ||||||||||| || |||| ||||||||||| |||||||||| ||||||||    
T  7235130 acagtggggtgctactcactacacttttgatgttatagtgttgacttcacc 7235180  T

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Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 9022912 - 9022870
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    |||||| |||||||| ||||||||||||||||| |||||||||    
T  9022912 aatatggtcaaagtatgttaggtcaaaattgcatattttcaaa 9022870  T

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Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 299
Target Start/End: Original strand, 11084170 - 11084202
Alignment:
Q  267 ttattttaatgacttcaccatagaattttcctt 299  Q
    ||||||| |||||||||||||||||||||||||    
T  11084170 ttattttcatgacttcaccatagaattttcctt 11084202  T

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Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 12677052 - 12676996
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaa-ttgcacattttcaaatggatcatctatt 68  Q
    |||||| ||||||||| |||| |||||| || |||||||||||||| ||||||||||    
T  12677052 aatatggtcaaagtaaattagatcaaaaattacacattttcaaatgaatcatctatt 12676996  T

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Target: scaffold0500 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 667 - 736
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| ||||| |||||||||||||||||||| |||||||||||| ||||||||| |||  ||||||||    
T  667 aatatggtcaaactaagttaggtcaaaattgcatattttcaaatgggtcatctattgcggggcggaggga 736  T

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Target: scaffold0289 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 9198 - 9153
Alignment:
Q  22 aaagtaagttaggtcaaaattgcacattttcaaatggatcatctat 67  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  9198 aaagtaagttagatcaaaattgcacattttcaaatggatcatctat 9153  T

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Target: scaffold0221 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 5448 - 5379
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    |||||| ||||||||||||||||||||||||||||||||||||  | |||| |||| ||| |||||||||    
T  5448 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggaggga 5379  T

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Target: scaffold0009 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 258
Target Start/End: Complemental strand, 42434 - 42386
Alignment:
Q  210 agtggggtgttattcacaacacttttgatattatagtgttaacttcacc 258  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||||    
T  42434 agtggggtgttactcacaacacttttgatgttatagtgttaacttcacc 42386  T

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Target: scaffold0001 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 184038 - 183996
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaa 55  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  184038 aatatggtcaaagtaagttaggtcaaaattgcacattttcaaa 183996  T

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Target: scaffold0283 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0283
Description:

Target: scaffold0283; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 3067 - 2999
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacggaacggaggga 82  Q
    ||||| ||||||||||  ||||||||||||||||||||| |||||| ||||||||| ||| |||||||||    
T  3067 aatataatcaaagtaaaataggtcaaaattgcacatttttaaatgggtcatctattgcgg-acggaggga 2999  T

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Target: scaffold1248 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold1248
Description:

Target: scaffold1248; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 1448 - 1507
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacgg 72  Q
    |||||| ||||||||||||| ||||||||| |||||||| ||||  ||||||||||||||    
T  1448 aatatggtcaaagtaagttatgtcaaaattacacatttttaaataaatcatctattacgg 1507  T

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Target: scaffold0952 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0952
Description:

Target: scaffold0952; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 865 - 806
Alignment:
Q  13 aatatgatcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctattacgg 72  Q
    |||||| ||||||||||||| ||||||||| |||||||| ||||  ||||||||||||||    
T  865 aatatggtcaaagtaagttatgtcaaaattacacatttttaaataaatcatctattacgg 806  T

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Target: scaffold0069 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 4506 - 4458
Alignment:
Q  20 tcaaagtaagttaggtcaaaattgcacattttcaaatggatcatctatt 68  Q
    ||||| |||||||||||||||||||||||||| ||||| ||||| ||||    
T  4506 tcaaaataagttaggtcaaaattgcacatttttaaatgaatcatttatt 4458  T

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Target: scaffold0291 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 208 - 256
Target Start/End: Complemental strand, 7975 - 7927
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttca 256  Q
    |||||||||||||| |||  ||| ||||||| |||||||||||||||||    
T  7975 acagtggggtgttactcattacaattttgatgttatagtgttaacttca 7927  T

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Target: scaffold0002 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 208 - 256
Target Start/End: Original strand, 94480 - 94528
Alignment:
Q  208 acagtggggtgttattcacaacacttttgatattatagtgttaacttca 256  Q
    |||||||||||||| |||| ||| ||||||| ||||| |||||||||||    
T  94480 acagtggggtgttactcactacaattttgatgttataatgttaacttca 94528  T

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