View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19346_high_15 (Length: 270)
Name: NF19346_high_15
Description: NF19346
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19346_high_15 |
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Alignment Details
Target: chr2 (Bit Score: 248; Significance: 1e-138; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 2665008 - 2665263
Alignment:
| Q |
1 |
tgtgaatttgcttataccatattccaagataagtgtaagtggaatttttaggtgtaaagaaaccaagttcaaaattttgtgaaggtgaaattagtgtttg |
100 |
Q |
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| T |
2665008 |
tgtgaatttgcttataccatattccaagataagtgtaagtggaatttttaggtgtaaagaaaccaagttcaaaattttgtgaaggtgaaattagtgtttg |
2665107 |
T |
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| Q |
101 |
gttaccagtgatgaattgcggtggagttatggtatcttctgcttttgaaggtattggaaacaatgttgttaaatggaaacaagtagcaagaagtagaaag |
200 |
Q |
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|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2665108 |
gttaccagtgatgaattgtggtggagttatggtatcttctgcttttgaaggtattggaaacaatgttgttaaatggaaacaagtagcaagaagtagaaag |
2665207 |
T |
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| Q |
201 |
aagaactcagttttctccatgattagttttttatccttcacattattattattatt |
256 |
Q |
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| T |
2665208 |
atgaactcagttttctccatgattagttttttatccttcacattattattattatt |
2665263 |
T |
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