View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19346_low_20 (Length: 238)

Name: NF19346_low_20
Description: NF19346
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19346_low_20
NF19346_low_20
[»] chr4 (53 HSPs)
chr4 (24-145)||(50769550-50769675)
chr4 (24-80)||(2181312-2181368)
chr4 (24-80)||(2837086-2837143)
chr4 (24-72)||(3658111-3658160)
chr4 (24-80)||(10059754-10059811)
chr4 (24-84)||(21597468-21597529)
chr4 (24-80)||(1420605-1420661)
chr4 (24-80)||(23759631-23759687)
chr4 (97-145)||(35393935-35393983)
chr4 (24-72)||(51362726-51362774)
chr4 (24-80)||(53924817-53924873)
chr4 (25-80)||(10059885-10059940)
chr4 (25-80)||(12719633-12719688)
chr4 (24-69)||(6614927-6614971)
chr4 (24-80)||(35393855-35393912)
chr4 (25-74)||(43074776-43074825)
chr4 (97-145)||(2653953-2654001)
chr4 (32-68)||(4796118-4796154)
chr4 (35-83)||(4796238-4796286)
chr4 (97-145)||(11824464-11824512)
chr4 (35-83)||(18937308-18937356)
chr4 (97-145)||(20112140-20112188)
chr4 (97-145)||(35383765-35383813)
chr4 (97-145)||(43074616-43074664)
chr4 (97-145)||(53312551-53312599)
chr4 (25-80)||(2016862-2016917)
chr4 (29-68)||(2016980-2017019)
chr4 (25-84)||(8965704-8965763)
chr4 (25-80)||(14449472-14449527)
chr4 (25-80)||(23759762-23759817)
chr4 (25-84)||(25909554-25909613)
chr4 (25-80)||(29697593-29697647)
chr4 (25-80)||(44356586-44356641)
chr4 (25-80)||(51362610-51362665)
chr4 (93-144)||(54983849-54983900)
chr4 (24-69)||(2654036-2654082)
chr4 (24-69)||(21871461-21871507)
chr4 (24-69)||(21927322-21927368)
chr4 (24-68)||(1571594-1571639)
chr4 (97-142)||(14449276-14449321)
chr4 (24-68)||(21322790-21322835)
chr4 (43-80)||(21957673-21957710)
chr4 (24-68)||(43074671-43074716)
chr4 (93-142)||(50769366-50769415)
chr4 (24-80)||(8965591-8965647)
chr4 (24-75)||(11824382-11824434)
chr4 (24-80)||(11983579-11983633)
chr4 (24-67)||(14016920-14016964)
chr4 (40-80)||(14060825-14060865)
chr4 (40-84)||(20737437-20737481)
chr4 (92-144)||(27978957-27979009)
chr4 (97-145)||(29697787-29697835)
chr4 (97-145)||(51371729-51371777)
[»] chr3 (49 HSPs)
chr3 (21-142)||(4474253-4474378)
chr3 (24-145)||(54718994-54719118)
chr3 (24-80)||(44624817-44624873)
chr3 (24-80)||(12759579-12759634)
chr3 (98-145)||(14349375-14349422)
chr3 (43-145)||(38958051-38958157)
chr3 (26-80)||(44436459-44436514)
chr3 (25-80)||(44436586-44436641)
chr3 (25-80)||(51315672-51315727)
chr3 (97-143)||(48348257-48348303)
chr3 (24-69)||(7218234-7218279)
chr3 (24-145)||(28204480-28204605)
chr3 (24-80)||(44433126-44433183)
chr3 (40-144)||(47189599-47189707)
chr3 (97-145)||(33329611-33329659)
chr3 (40-80)||(51315565-51315605)
chr3 (93-144)||(27178141-27178192)
chr3 (25-80)||(38957917-38957972)
chr3 (25-80)||(44433252-44433307)
chr3 (98-145)||(53184784-53184831)
chr3 (27-80)||(25154370-25154424)
chr3 (24-74)||(28944105-28944155)
chr3 (24-80)||(8024845-8024902)
chr3 (24-76)||(25248873-25248926)
chr3 (43-145)||(28712668-28712775)
chr3 (29-80)||(86754-86806)
chr3 (24-68)||(1814631-1814675)
chr3 (97-145)||(3193047-3193095)
chr3 (97-145)||(14340733-14340781)
chr3 (97-145)||(14856546-14856594)
chr3 (40-80)||(15978895-15978935)
chr3 (97-145)||(17773170-17773218)
chr3 (97-145)||(19074471-19074519)
chr3 (97-145)||(20432190-20432238)
chr3 (25-84)||(86640-86699)
chr3 (25-80)||(44585974-44586029)
chr3 (25-75)||(25843441-25843491)
chr3 (34-80)||(35359181-35359227)
chr3 (24-80)||(3192968-3193025)
chr3 (24-69)||(3916624-3916669)
chr3 (24-84)||(14340800-14340861)
chr3 (24-68)||(14992704-14992749)
chr3 (24-80)||(44585858-44585915)
chr3 (97-142)||(46226953-46226998)
chr3 (40-80)||(17773241-17773280)
chr3 (40-80)||(19074542-19074581)
chr3 (24-84)||(27178206-27178265)
chr3 (97-145)||(28944231-28944279)
chr3 (24-84)||(48348321-48348381)
[»] chr6 (21 HSPs)
chr6 (24-145)||(12766402-12766528)
chr6 (24-80)||(10727261-10727318)
chr6 (40-143)||(28011329-28011436)
chr6 (24-80)||(2853498-2853554)
chr6 (97-145)||(33401319-33401367)
chr6 (25-80)||(10727382-10727437)
chr6 (29-145)||(238930-239049)
chr6 (34-80)||(3579665-3579711)
chr6 (35-84)||(2203350-2203399)
chr6 (97-138)||(18030944-18030985)
chr6 (43-84)||(26601666-26601707)
chr6 (97-145)||(5003089-5003137)
chr6 (24-68)||(30349542-30349586)
chr6 (25-80)||(2853603-2853658)
chr6 (25-80)||(32143329-32143384)
chr6 (40-74)||(32143454-32143488)
chr6 (24-69)||(33401241-33401287)
chr6 (24-69)||(6036726-6036771)
chr6 (40-80)||(2840860-2840900)
chr6 (97-145)||(3579595-3579643)
chr6 (44-84)||(26311461-26311501)
[»] chr7 (45 HSPs)
chr7 (24-74)||(19644990-19645040)
chr7 (24-80)||(15348144-15348200)
chr7 (24-80)||(36580344-36580400)
chr7 (24-80)||(5172710-5172767)
chr7 (26-80)||(23746078-23746132)
chr7 (25-145)||(36903459-36903581)
chr7 (24-145)||(4049908-4050035)
chr7 (24-145)||(11373847-11373973)
chr7 (97-145)||(17876423-17876471)
chr7 (24-142)||(20185103-20185226)
chr7 (29-84)||(6726323-6726378)
chr7 (25-80)||(18504314-18504369)
chr7 (25-68)||(19644885-19644928)
chr7 (25-84)||(35250185-35250244)
chr7 (99-145)||(21748082-21748128)
chr7 (98-143)||(8074142-8074187)
chr7 (25-145)||(28350116-28350242)
chr7 (24-80)||(35250306-35250363)
chr7 (25-80)||(8074061-8074117)
chr7 (24-68)||(15107075-15107119)
chr7 (97-145)||(15348224-15348272)
chr7 (21-80)||(18186510-18186570)
chr7 (97-145)||(20505275-20505323)
chr7 (40-80)||(28472582-28472621)
chr7 (24-80)||(41243830-41243886)
chr7 (25-84)||(8073941-8074000)
chr7 (25-80)||(15029132-15029187)
chr7 (25-80)||(15107180-15107235)
chr7 (25-80)||(17876240-17876295)
chr7 (25-84)||(18186639-18186698)
chr7 (25-80)||(28350333-28350386)
chr7 (24-69)||(11374031-11374077)
chr7 (42-72)||(23826224-23826254)
chr7 (34-68)||(29834245-29834279)
chr7 (39-80)||(3247376-3247417)
chr7 (35-68)||(17876356-17876389)
chr7 (24-68)||(18504427-18504472)
chr7 (24-80)||(28785828-28785885)
chr7 (41-69)||(3382025-3382053)
chr7 (97-145)||(14247294-14247342)
chr7 (98-142)||(23746161-23746205)
chr7 (97-145)||(23826288-23826336)
chr7 (97-141)||(28785760-28785804)
chr7 (97-145)||(36580274-36580322)
chr7 (97-145)||(44312745-44312793)
[»] chr5 (35 HSPs)
chr5 (24-80)||(31080667-31080723)
chr5 (21-80)||(36798359-36798419)
chr5 (24-142)||(3333695-3333819)
chr5 (24-69)||(22300798-22300844)
chr5 (24-80)||(28446191-28446247)
chr5 (25-80)||(2974704-2974759)
chr5 (24-78)||(2974819-2974874)
chr5 (24-79)||(9852972-9853027)
chr5 (25-80)||(12406228-12406283)
chr5 (25-80)||(31080547-31080602)
chr5 (24-142)||(3999089-3999213)
chr5 (24-69)||(6130336-6130382)
chr5 (24-69)||(32391800-32391846)
chr5 (24-69)||(40276100-40276146)
chr5 (24-80)||(12406112-12406168)
chr5 (24-68)||(21066526-21066571)
chr5 (97-142)||(43098031-43098076)
chr5 (97-145)||(2974900-2974948)
chr5 (40-80)||(19340831-19340871)
chr5 (40-80)||(20512402-20512442)
chr5 (40-80)||(30603683-30603723)
chr5 (25-80)||(9852857-9852912)
chr5 (25-80)||(16132815-16132870)
chr5 (25-80)||(19131688-19131743)
chr5 (25-80)||(25910794-25910849)
chr5 (25-80)||(37897906-37897960)
chr5 (97-144)||(39574240-39574287)
chr5 (26-80)||(36798242-36798296)
chr5 (24-69)||(20629819-20629864)
chr5 (106-143)||(25911000-25911037)
chr5 (97-145)||(35166558-35166607)
chr5 (24-80)||(35877466-35877523)
chr5 (24-80)||(37897788-37897845)
chr5 (24-69)||(40132986-40133031)
chr5 (97-145)||(20512465-20512513)
[»] chr2 (48 HSPs)
chr2 (29-145)||(14489404-14489524)
chr2 (24-69)||(31827720-31827765)
chr2 (24-80)||(5470398-5470454)
chr2 (24-80)||(6592921-6592977)
chr2 (40-145)||(34679296-34679404)
chr2 (25-84)||(25333565-25333624)
chr2 (24-80)||(39918628-39918685)
chr2 (24-68)||(4576626-4576670)
chr2 (40-80)||(6510203-6510243)
chr2 (24-68)||(8857234-8857278)
chr2 (97-145)||(18709247-18709295)
chr2 (24-80)||(35718843-35718899)
chr2 (25-80)||(14489284-14489339)
chr2 (25-80)||(14943733-14943788)
chr2 (98-145)||(32969794-32969841)
chr2 (97-142)||(2609081-2609126)
chr2 (25-78)||(16043210-16043263)
chr2 (24-80)||(19206211-19206268)
chr2 (100-145)||(31827800-31827845)
chr2 (43-84)||(34100807-34100848)
chr2 (24-80)||(43028980-43029037)
chr2 (28-80)||(25456-25508)
chr2 (97-145)||(16043291-16043339)
chr2 (40-80)||(32969728-32969768)
chr2 (24-68)||(37803318-37803362)
chr2 (97-145)||(37803398-37803446)
chr2 (25-80)||(5470525-5470580)
chr2 (25-80)||(34760918-34760973)
chr2 (25-64)||(35718732-35718771)
chr2 (25-80)||(37431614-37431669)
chr2 (25-80)||(44617927-44617982)
chr2 (24-70)||(18969176-18969222)
chr2 (40-69)||(4925650-4925679)
chr2 (97-142)||(37431803-37431848)
chr2 (97-145)||(6592724-6592772)
chr2 (97-145)||(19895613-19895661)
chr2 (24-68)||(19895697-19895740)
chr2 (25-69)||(24472635-24472679)
chr2 (25-69)||(27489514-27489558)
chr2 (25-69)||(32013248-32013292)
chr2 (97-145)||(34679097-34679145)
chr2 (40-80)||(34761063-34761103)
chr2 (98-142)||(34761127-34761171)
chr2 (40-80)||(36195661-36195700)
chr2 (40-80)||(37431741-37431781)
chr2 (25-69)||(43028875-43028919)
chr2 (40-80)||(44297632-44297672)
chr2 (24-68)||(44617814-44617858)
[»] chr1 (39 HSPs)
chr1 (24-145)||(39642200-39642328)
chr1 (24-78)||(15659053-15659107)
chr1 (97-143)||(18632605-18632651)
chr1 (42-145)||(23220767-23220875)
chr1 (24-80)||(3377698-3377755)
chr1 (25-80)||(3377572-3377627)
chr1 (25-80)||(14978989-14979044)
chr1 (40-79)||(50226594-50226633)
chr1 (25-74)||(14190730-14190779)
chr1 (24-69)||(32295034-32295079)
chr1 (39-76)||(48319608-48319645)
chr1 (24-80)||(16545747-16545803)
chr1 (40-80)||(23891730-23891770)
chr1 (40-80)||(25085469-25085509)
chr1 (25-69)||(41997829-41997873)
chr1 (25-68)||(45739123-45739167)
chr1 (24-72)||(49426074-49426122)
chr1 (24-80)||(50401559-50401615)
chr1 (24-80)||(1096634-1096692)
chr1 (25-80)||(16874691-16874746)
chr1 (98-145)||(25486479-25486526)
chr1 (25-80)||(39642396-39642451)
chr1 (35-73)||(14190625-14190663)
chr1 (100-142)||(16874511-16874553)
chr1 (43-73)||(27864250-27864280)
chr1 (24-69)||(6320768-6320813)
chr1 (43-80)||(7060699-7060736)
chr1 (24-80)||(12960916-12960973)
chr1 (97-142)||(46880741-46880786)
chr1 (40-80)||(1096538-1096578)
chr1 (97-145)||(3377501-3377549)
chr1 (97-145)||(14978797-14978845)
chr1 (40-80)||(17760893-17760933)
chr1 (97-145)||(25085399-25085447)
chr1 (24-80)||(30849291-30849347)
chr1 (40-68)||(41997722-41997750)
chr1 (44-80)||(44436955-44436990)
chr1 (42-74)||(46573032-46573064)
chr1 (97-145)||(46573093-46573141)
[»] chr8 (31 HSPs)
chr8 (25-80)||(37813279-37813334)
chr8 (26-80)||(41487271-41487326)
chr8 (25-80)||(41487398-41487453)
chr8 (24-80)||(23702197-23702253)
chr8 (24-69)||(27545543-27545588)
chr8 (24-80)||(30539059-30539116)
chr8 (97-142)||(37263361-37263406)
chr8 (97-145)||(9762465-9762513)
chr8 (97-145)||(17070907-17070955)
chr8 (97-145)||(17577317-17577365)
chr8 (24-68)||(29657888-29657932)
chr8 (98-145)||(521709-521756)
chr8 (25-80)||(21486725-21486780)
chr8 (26-69)||(26824023-26824065)
chr8 (37-68)||(39889853-39889884)
chr8 (25-76)||(39889961-39890012)
chr8 (21-69)||(9762384-9762433)
chr8 (24-80)||(14880524-14880578)
chr8 (40-69)||(17070988-17071017)
chr8 (40-69)||(17577255-17577284)
chr8 (24-68)||(44101372-44101417)
chr8 (24-68)||(45177394-45177439)
chr8 (97-142)||(45456969-45457014)
chr8 (43-79)||(6807243-6807279)
chr8 (97-145)||(16982626-16982674)
chr8 (97-145)||(20228231-20228279)
chr8 (25-69)||(22192486-22192530)
chr8 (97-145)||(23702123-23702171)
chr8 (25-69)||(25144024-25144068)
chr8 (97-145)||(37813162-37813210)
chr8 (97-145)||(41487200-41487248)
[»] scaffold0062 (3 HSPs)
scaffold0062 (40-80)||(46147-46187)
scaffold0062 (98-145)||(46076-46123)
scaffold0062 (25-80)||(46263-46318)
[»] scaffold0067 (1 HSPs)
scaffold0067 (43-80)||(4220-4257)
[»] scaffold0025 (1 HSPs)
scaffold0025 (25-80)||(19217-19272)
[»] scaffold0015 (1 HSPs)
scaffold0015 (24-69)||(77047-77093)
[»] scaffold0417 (1 HSPs)
scaffold0417 (97-142)||(9603-9648)
[»] scaffold0194 (1 HSPs)
scaffold0194 (97-138)||(24900-24941)
[»] scaffold0150 (1 HSPs)
scaffold0150 (24-68)||(9633-9677)
[»] scaffold0137 (1 HSPs)
scaffold0137 (25-69)||(19995-20039)


Alignment Details
Target: chr4 (Bit Score: 55; Significance: 1e-22; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 24 - 145
Target Start/End: Original strand, 50769550 - 50769675
Alignment:
Q  24 aaaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggttttatag--nnnnnnnagggg--caaaatcgaaacttcgtaaaagt 119  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||  |||||||||||||         |||||  |||||||| ||||||||||||||    
T  50769550 aaaaattggtcttgggggccaaaactgctacagttgcaaaacttagtaggcggttttatagtttttttttagggggccaaaatcgcaacttcgtaaaagt 50769649  T
Q  120 tagggggagaaaactgctattaagcc 145  Q
    ||||||| |||||||||| |||||||    
T  50769650 tagggggcgaaaactgcttttaagcc 50769675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 2181312 - 2181368
Alignment:
Q  24 aaaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||| |||||| ||||||||||| ||||||||||||||||||||||| |||||    
T  2181312 aaaaattgtccttgggggccaaaactgttacagttgcaaaacttagagggcagtttt 2181368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 2837086 - 2837143
Alignment:
Q  24 aaaaattggccttggagg-ccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||||||||||||| |||||||||||||| ||| ||||||||| ||||||||||    
T  2837086 aaaaattggccttggagggccaaaactgctacaattgtaaaacttagggggcggtttt 2837143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 72
Target Start/End: Original strand, 3658111 - 3658160
Alignment:
Q  24 aaaaattggccttggag-gccaaaactgctacagttgcaaaacttagagg 72  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  3658111 aaaaattggccttggggagccaaaactgctacagttgcaaaacttagagg 3658160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 10059811 - 10059754
Alignment:
Q  24 aaaaattggccttggagg-ccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||| |||||| || |||||||||||||||||||||||||||| ||||||||||    
T  10059811 aaaaattgaccttgggggaccaaaactgctacagttgcaaaacttagggggcggtttt 10059754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 84
Target Start/End: Complemental strand, 21597529 - 21597468
Alignment:
Q  24 aaaaattggccttggag-gccaaaactgctacagttgcaaaacttagagggcggttttatag 84  Q
    |||||||| |||||| | ||||||||||||||||||||||||||||| || |||||||||||    
T  21597529 aaaaattgaccttggggtgccaaaactgctacagttgcaaaacttaggggacggttttatag 21597468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 1420661 - 1420605
Alignment:
Q  24 aaaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||||||||  |||||||||||| || ||||||||||||||| ||||||||||    
T  1420661 aaaaattggccttaaaggccaaaactgatatagttgcaaaacttagggggcggtttt 1420605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 23759687 - 23759631
Alignment:
Q  24 aaaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    ||||||||||||||| |||||||||| |||||||||||||| |||| || |||||||    
T  23759687 aaaaattggccttgggggccaaaactactacagttgcaaaatttaggggacggtttt 23759631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 35393935 - 35393983
Alignment:
Q  97 caaaatcgaaacttcgtaaaagttagggggagaaaactgctattaagcc 145  Q
    |||||||| |||||||| |||||||||||| ||||||||||||||||||    
T  35393935 caaaatcgcaacttcgtgaaagttagggggtgaaaactgctattaagcc 35393983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 72
Target Start/End: Original strand, 51362726 - 51362774
Alignment:
Q  24 aaaaattggccttggaggccaaaactgctacagttgcaaaacttagagg 72  Q
    ||||||||| ||||| | |||||||||||||||||||||||||||||||    
T  51362726 aaaaattggtcttggggaccaaaactgctacagttgcaaaacttagagg 51362774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 53924873 - 53924817
Alignment:
Q  24 aaaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    ||||||||  ||||| |||||||||||||||||||||||||||||| || |||||||    
T  53924873 aaaaattgatcttgggggccaaaactgctacagttgcaaaacttaggggacggtttt 53924817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 10059885 - 10059940
Alignment:
Q  25 aaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||||||||  |||||||||||| |||| |||||||||||| ||||||||||    
T  10059885 aaaattggccttgagggccaaaactgccacagatgcaaaacttagggggcggtttt 10059940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 12719633 - 12719688
Alignment:
Q  25 aaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||| |||||||||||||||||| |||| |||||||||||| ||| ||||||    
T  12719633 aaaattggtcttggaggccaaaactgccacagatgcaaaacttagggggtggtttt 12719688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 69
Target Start/End: Complemental strand, 6614971 - 6614927
Alignment:
Q  24 aaaaattggccttggaggccaaaactgctacagttgcaaaacttag 69  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||    
T  6614971 aaaaattgaccttgg-ggccaaaactgctacagttgcaaaacttag 6614927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 35393855 - 35393912
Alignment:
Q  24 aaaaattggccttggagg-ccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    ||||||||||||||| || ||||||||||||||||| |||||| ||| ||||||||||    
T  35393855 aaaaattggccttggggggccaaaactgctacagttacaaaacctagggggcggtttt 35393912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 43074776 - 43074825
Alignment:
Q  25 aaaattggccttggaggccaaaactgctacagttgcaaaacttagagggc 74  Q
    |||||||||||||| |||||||||||| |||| |||||||||||| ||||    
T  43074776 aaaattggccttgggggccaaaactgccacagatgcaaaacttagggggc 43074825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 2654001 - 2653953
Alignment:
Q  97 caaaatcgaaacttcgtaaaagttagggggagaaaactgctattaagcc 145  Q
    |||||||| |||||||||||||||||| ||  |||||||||||||||||    
T  2654001 caaaatcgcaacttcgtaaaagttaggaggcaaaaactgctattaagcc 2653953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 68
Target Start/End: Complemental strand, 4796154 - 4796118
Alignment:
Q  32 gccttggaggccaaaactgctacagttgcaaaactta 68  Q
    ||||||| |||||||||||||||||||||||||||||    
T  4796154 gccttgggggccaaaactgctacagttgcaaaactta 4796118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 83
Target Start/End: Original strand, 4796238 - 4796286
Alignment:
Q  35 ttggaggccaaaactgctacagttgcaaaacttagagggcggttttata 83  Q
    |||| |||||||||||| |||| ||||||||||| ||||||||||||||    
T  4796238 ttgggggccaaaactgccacaggtgcaaaacttaaagggcggttttata 4796286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 11824464 - 11824512
Alignment:
Q  97 caaaatcgaaacttcgtaaaagttagggggagaaaactgctattaagcc 145  Q
    |||||||| ||||||||||||||||||||| | |||||| |||||||||    
T  11824464 caaaatcgcaacttcgtaaaagttagggggcggaaactgttattaagcc 11824512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 83
Target Start/End: Complemental strand, 18937356 - 18937308
Alignment:
Q  35 ttggaggccaaaactgctacagttgcaaaacttagagggcggttttata 83  Q
    |||| |||||||||||||||||||||||||||||| || || |||||||    
T  18937356 ttgggggccaaaactgctacagttgcaaaacttaggggacgattttata 18937308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 20112188 - 20112140
Alignment:
Q  97 caaaatcgaaacttcgtaaaagttagggggagaaaactgctattaagcc 145  Q
    |||||||| |||||| |||||||||||||  ||||||||||||||||||    
T  20112188 caaaatcgtaacttcttaaaagttaggggttgaaaactgctattaagcc 20112140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 35383813 - 35383765
Alignment:
Q  97 caaaatcgaaacttcgtaaaagttagggggagaaaactgctattaagcc 145  Q
    |||||||  |||||||| |||||||||||| ||||||||||||||||||    
T  35383813 caaaatcacaacttcgtgaaagttagggggcgaaaactgctattaagcc 35383765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 43074664 - 43074616
Alignment:
Q  97 caaaatcgaaacttcgtaaaagttagggggagaaaactgctattaagcc 145  Q
    |||||||| |||||||| |||||||||||| ||||| ||||||||||||    
T  43074664 caaaatcgcaacttcgtgaaagttagggggcgaaaattgctattaagcc 43074616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 53312551 - 53312599
Alignment:
Q  97 caaaatcgaaacttcgtaaaagttagggggagaaaactgctattaagcc 145  Q
    |||||||| |||||||| |||||||||||| |||||||| |||||||||    
T  53312551 caaaatcgcaacttcgtgaaagttagggggtgaaaactgttattaagcc 53312599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 2016917 - 2016862
Alignment:
Q  25 aaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||||||||| |||||||||||| |||  |||||||||||| |||| |||||    
T  2016917 aaaattggccttgggggccaaaactgccacatgtgcaaaacttagggggcagtttt 2016862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 68
Target Start/End: Original strand, 2016980 - 2017019
Alignment:
Q  29 ttggccttggaggccaaaactgctacagttgcaaaactta 68  Q
    |||||||||| ||||||||||| |||||||||||||||||    
T  2016980 ttggccttgggggccaaaactgttacagttgcaaaactta 2017019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 84
Target Start/End: Original strand, 8965704 - 8965763
Alignment:
Q  25 aaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggttttatag 84  Q
    ||||||| | |||| | |||||||||| |||| |||||||||||| ||||||||||||||    
T  8965704 aaaattgacattggggaccaaaactgccacagatgcaaaacttagggggcggttttatag 8965763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 14449472 - 14449527
Alignment:
Q  25 aaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||||||||| |||||||||||| |||  |||||||||||| | ||||||||    
T  14449472 aaaattggccttgggggccaaaactgccacaaatgcaaaacttagggagcggtttt 14449527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 23759762 - 23759817
Alignment:
Q  25 aaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    ||||||||||||||||||||||||||  |||| | |||||||||| || |||||||    
T  23759762 aaaattggccttggaggccaaaactgtcacagatacaaaacttaggggacggtttt 23759817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 84
Target Start/End: Complemental strand, 25909613 - 25909554
Alignment:
Q  25 aaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggttttatag 84  Q
    |||||||||||||| |||||||||  | |||  |||||||||||| ||||||||||||||    
T  25909613 aaaattggccttgggggccaaaacctccacaagtgcaaaacttagggggcggttttatag 25909554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 29697647 - 29697593
Alignment:
Q  25 aaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||||||||||  |||||||||| |||| |||||||||||| ||||||||||    
T  29697647 aaaattggccttggaa-ccaaaactgccacagatgcaaaacttagggggcggtttt 29697593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 44356586 - 44356641
Alignment:
Q  25 aaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||| ||||| |||||||||||| |||  |||||||||||| ||||||||||    
T  44356586 aaaattggtcttgggggccaaaactgccacatatgcaaaacttagggggcggtttt 44356641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 51362665 - 51362610
Alignment:
Q  25 aaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||| ||||| |||||||||||| |||  |||||||||||| ||||||||||    
T  51362665 aaaattggtcttgggggccaaaactgccacatatgcaaaacttagggggcggtttt 51362610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 144
Target Start/End: Complemental strand, 54983900 - 54983849
Alignment:
Q  93 ggggcaaaatcgaaacttcgtaaaagttagggggagaaaactgctattaagc 144  Q
    ||||| |||||| | ||||||||||||||||||  |||||||||||||||||    
T  54983900 ggggccaaatcgcatcttcgtaaaagttaggggacgaaaactgctattaagc 54983849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 69
Target Start/End: Complemental strand, 2654082 - 2654036
Alignment:
Q  24 aaaaattggccttggagg-ccaaaactgctacagttgcaaaacttag 69  Q
    |||||||||| |||| || ||||||||||||||||||||||||||||    
T  2654082 aaaaattggctttggggggccaaaactgctacagttgcaaaacttag 2654036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 69
Target Start/End: Complemental strand, 21871507 - 21871461
Alignment:
Q  24 aaaaattggccttggagg-ccaaaactgctacagttgcaaaacttag 69  Q
    |||||||||  ||||||| ||||||||||||||||||||||||||||    
T  21871507 aaaaattggttttggagggccaaaactgctacagttgcaaaacttag 21871461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 69
Target Start/End: Complemental strand, 21927368 - 21927322
Alignment:
Q  24 aaaaattggccttggagg-ccaaaactgctacagttgcaaaacttag 69  Q
    |||||||||  ||||||| ||||||||||||||||||||||||||||    
T  21927368 aaaaattggttttggagggccaaaactgctacagttgcaaaacttag 21927322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 68
Target Start/End: Original strand, 1571594 - 1571639
Alignment:
Q  24 aaaaattggcctt-ggaggccaaaactgctacagttgcaaaactta 68  Q
    ||||||||||||| || |||||||||||| ||||||||||||||||    
T  1571594 aaaaattggccttagggggccaaaactgccacagttgcaaaactta 1571639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 142
Target Start/End: Complemental strand, 14449321 - 14449276
Alignment:
Q  97 caaaatcgaaacttcgtaaaagttagggggagaaaactgctattaa 142  Q
    |||||||  |||||||| |||||||||||| |||||||||||||||    
T  14449321 caaaatctcaacttcgtgaaagttagggggcgaaaactgctattaa 14449276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 68
Target Start/End: Complemental strand, 21322835 - 21322790
Alignment:
Q  24 aaaaattggccttgg-aggccaaaactgctacagttgcaaaactta 68  Q
    ||||||||||||||| |||||||||||| || ||||||||||||||    
T  21322835 aaaaattggccttgggaggccaaaactgttaaagttgcaaaactta 21322790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 80
Target Start/End: Original strand, 21957673 - 21957710
Alignment:
Q  43 caaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||||||||||||||||||||||  |||||||||    
T  21957673 caaaactgctacagttgcaaaacttaggaggcggtttt 21957710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 68
Target Start/End: Complemental strand, 43074716 - 43074671
Alignment:
Q  24 aaaaattggccttggagg-ccaaaactgctacagttgcaaaactta 68  Q
    |||||||||| |||| || |||||||||||||||||||||||||||    
T  43074716 aaaaattggcattggggggccaaaactgctacagttgcaaaactta 43074671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 142
Target Start/End: Complemental strand, 50769415 - 50769366
Alignment:
Q  93 ggggcaaaatcgaaacttcgtaaaagttagggggagaaaactgctattaa 142  Q
    |||||||||||| ||||| |  ||||||||||||| ||||||||||||||    
T  50769415 ggggcaaaatcgcaactttgggaaagttagggggataaaactgctattaa 50769366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 8965647 - 8965591
Alignment:
Q  24 aaaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||| |||||| | |||||||||  ||||||||||||||||  ||||||||||    
T  8965647 aaaaattgaccttggggaccaaaactggcacagttgcaaaacttaaggggcggtttt 8965591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 75
Target Start/End: Original strand, 11824382 - 11824434
Alignment:
Q  24 aaaaattggccttggagg-ccaaaactgctacagttgcaaaacttagagggcg 75  Q
    ||||||||| |||| ||| |||||||| ||||||||||||||||||| |||||    
T  11824382 aaaaattggtcttgcagggccaaaactactacagttgcaaaacttagggggcg 11824434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 11983579 - 11983633
Alignment:
Q  24 aaaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    ||||||||||||||| |||||||||| ||||  ||||||||||||| ||||||||||    
T  11983579 aaaaattggccttgg-ggccaaaacttctacgattgcaaaacttag-gggcggtttt 11983633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 67
Target Start/End: Original strand, 14016920 - 14016964
Alignment:
Q  24 aaaaattggccttggagg-ccaaaactgctacagttgcaaaactt 67  Q
    ||||||||||||||| || || |||||||||||||||||||||||    
T  14016920 aaaaattggccttgggggaccgaaactgctacagttgcaaaactt 14016964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 80
Target Start/End: Complemental strand, 14060865 - 14060825
Alignment:
Q  40 ggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||||||||| ||||||||| ||||| ||||||||||    
T  14060865 ggccaaaactgctatagttgcaaagcttagggggcggtttt 14060825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 84
Target Start/End: Original strand, 20737437 - 20737481
Alignment:
Q  40 ggccaaaactgctacagttgcaaaacttagagggcggttttatag 84  Q
    |||||||||||||| |||||||||| |||| ||||| ||||||||    
T  20737437 ggccaaaactgctatagttgcaaaatttagggggcgattttatag 20737481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 144
Target Start/End: Original strand, 27978957 - 27979009
Alignment:
Q  92 aggggcaaaatcgaaacttcgtaaaagttagggggagaaaactgctattaagc 144  Q
    |||| |||||||| |||||||| |||||||||||| ||||| || ||||||||    
T  27978957 agggccaaaatcgcaacttcgttaaagttagggggcgaaaaatgttattaagc 27979009  T

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Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 29697787 - 29697835
Alignment:
Q  97 caaaatcgaaacttcgtaaaagttagggggagaaaactgctattaagcc 145  Q
    |||||||| |||||| | ||||||||| || ||||||||||||||||||    
T  29697787 caaaatcgcaacttcatgaaagttaggaggtgaaaactgctattaagcc 29697835  T

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Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 51371729 - 51371777
Alignment:
Q  97 caaaatcgaaacttcgtaaaagttagggggagaaaactgctattaagcc 145  Q
    |||||||| |||||||  |||||||||||| ||||||| ||||||||||    
T  51371729 caaaatcgcaacttcgagaaagttagggggcgaaaactactattaagcc 51371777  T

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Target: chr3 (Bit Score: 54; Significance: 4e-22; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 21 - 142
Target Start/End: Original strand, 4474253 - 4474378
Alignment:
Q  21 acaaaaaattggccttggagg-ccaaaactgctacagttgcaaaacttagagggcggttttat-agnnnnnnnagggg--caaaatcgaaacttcgtaaa 116  Q
    |||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||| | |        |||||  |||||||| |||||||||||    
T  4474253 acaaaaaattggtcttggggggccaaaactgctacagttgcaaaacttagagggcggttttgtaattttttttagggggccaaaatcgcaacttcgtaaa 4474352  T
Q  117 agttagggggagaaaactgctattaa 142  Q
    ||||||| ||||||||||||||||||    
T  4474353 agttaggaggagaaaactgctattaa 4474378  T

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Target: chr3; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 24 - 145
Target Start/End: Complemental strand, 54719118 - 54718994
Alignment:
Q  24 aaaaattggccttggagg-ccaaaactgctacagttgcaaaacttagagggcggttttatagnnnnnnnagggg--caaaatcgaaacttcgtaaaagtt 120  Q
    |||||||| |||||| || ||||||||||||||||||||||||||||||| |||||||||||       |||||  |||||||| |||||||| ||||||    
T  54719118 aaaaattgaccttggggggccaaaactgctacagttgcaaaacttagaggacggttttatagtttttttaggggttcaaaatcgcaacttcgtgaaagtt 54719019  T
Q  121 agggggagaaaactgctattaagcc 145  Q
    || ||  ||||||||||||||||||    
T  54719018 agtggacgaaaactgctattaagcc 54718994  T

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Target: chr3; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 44624817 - 44624873
Alignment:
Q  24 aaaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||    
T  44624817 aaaaattgaccttggaggccgaaactgctacagttgcaaaacttagatggcggtttt 44624873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 12759634 - 12759579
Alignment:
Q  24 aaaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||    
T  12759634 aaaaattgactttggaggccaaaactgctacagttgcaaaacttag-gggcggtttt 12759579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 14349375 - 14349422
Alignment:
Q  98 aaaatcgaaacttcgtaaaagttagggggagaaaactgctattaagcc 145  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  14349375 aaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcc 14349422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 145
Target Start/End: Original strand, 38958051 - 38958157
Alignment:
Q  43 caaaactgctacagttgcaaaacttagagggcggttttatag--nnnnnnnagggg--caaaatcgaaacttcgtaaaagttagggggagaaaactgcta 138  Q
    ||||||||||||||||||||||||||| |||||||||| |||         |||||  |||||||| || ||||| |||||||||||| |||||||||||    
T  38958051 caaaactgctacagttgcaaaacttagggggcggttttgtagttttttcttaggggctcaaaatcgtaatttcgtgaaagttagggggcgaaaactgcta 38958150  T
Q  139 ttaagcc 145  Q
    |||||||    
T  38958151 ttaagcc 38958157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 26 - 80
Target Start/End: Complemental strand, 44436514 - 44436459
Alignment:
Q  26 aaattggccttggagg-ccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    ||||||||||||| || |||||||||||||||||||||||||||| ||||||||||    
T  44436514 aaattggccttggggggccaaaactgctacagttgcaaaacttagggggcggtttt 44436459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 44436586 - 44436641
Alignment:
Q  25 aaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||||||||| |||||||||||| |||| |||||||||||| ||||||||||    
T  44436586 aaaattggccttgggggccaaaactgccacagatgcaaaacttagggggcggtttt 44436641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 51315672 - 51315727
Alignment:
Q  25 aaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||||||||| |||||||||||| |||| |||||||||||| ||||||||||    
T  51315672 aaaattggccttgggggccaaaactgccacaggtgcaaaacttagggggcggtttt 51315727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 97 - 143
Target Start/End: Complemental strand, 48348303 - 48348257
Alignment:
Q  97 caaaatcgaaacttcgtaaaagttagggggagaaaactgctattaag 143  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||    
T  48348303 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaag 48348257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 69
Target Start/End: Complemental strand, 7218279 - 7218234
Alignment:
Q  24 aaaaattggccttggaggccaaaactgctacagttgcaaaacttag 69  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||    
T  7218279 aaaaaatggccttggaggccaaaactgctatagttgcaaaacttag 7218234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 145
Target Start/End: Complemental strand, 28204605 - 28204480
Alignment:
Q  24 aaaaattggccttggagg-ccaaaactgctacagttgcaaaacttagagggcggttttatagnnnnnnn-agggg--caaaatcgaaacttcgtaaaagt 119  Q
    ||||||||||||||| || |||||||||||||||||| |||| |||| ||||| |||| |||        |||||  |||||||| |||||||| |||||    
T  28204605 aaaaattggccttgggggaccaaaactgctacagttgtaaaatttagggggcgattttgtagttttttttagggggtcaaaatcgcaacttcgtgaaagt 28204506  T
Q  120 tagggggagaaaactgctattaagcc 145  Q
    || |||| ||||||||||||||||||    
T  28204505 taaggggcgaaaactgctattaagcc 28204480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 44433183 - 44433126
Alignment:
Q  24 aaaaattggccttgg-aggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    ||||||||||||||| ||||||||||||||| ||||||||||| ||| ||||||||||    
T  44433183 aaaaattggccttgggaggccaaaactgctatagttgcaaaacctagggggcggtttt 44433126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 144
Target Start/End: Complemental strand, 47189707 - 47189599
Alignment:
Q  40 ggccaaaactgctacagttgcaaaacttagagggcggttttatag--nnnnnnnagggg--caaaatcgaaacttcgtaaaagttagggggagaaaactg 135  Q
    |||||||||||||||||||||||||||||  ||||||||||||||         |||||  |||||||| |||||| |||||||||||| | ||||||||    
T  47189707 ggccaaaactgctacagttgcaaaacttaaggggcggttttatagtttttttttagggggccaaaatcgcaacttcataaaagttagggagcgaaaactg 47189608  T
Q  136 ctattaagc 144  Q
     ||||||||    
T  47189607 ttattaagc 47189599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 33329659 - 33329611
Alignment:
Q  97 caaaatcgaaacttcgtaaaagttagggggagaaaactgctattaagcc 145  Q
    |||||||| ||||||||||||||||| ||| ||||||||||||||||||    
T  33329659 caaaatcgcaacttcgtaaaagttagagggcgaaaactgctattaagcc 33329611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 40 - 80
Target Start/End: Complemental strand, 51315605 - 51315565
Alignment:
Q  40 ggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  51315605 ggccaaaactgctacagttgcaaaacttagggggcggtttt 51315565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 144
Target Start/End: Complemental strand, 27178192 - 27178141
Alignment:
Q  93 ggggcaaaatcgaaacttcgtaaaagttagggggagaaaactgctattaagc 144  Q
    ||||| |||||| ||||||||||||||||||||  |||||||||||||||||    
T  27178192 ggggccaaatcgcaacttcgtaaaagttaggggacgaaaactgctattaagc 27178141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 38957972 - 38957917
Alignment:
Q  25 aaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||||||||| |||||||||||| |||  |||||||||||| ||||||||||    
T  38957972 aaaattggccttgggggccaaaactgccacaaatgcaaaacttagggggcggtttt 38957917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 44433252 - 44433307
Alignment:
Q  25 aaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||||||||| |||||||||||| |||  |||||||||||| ||||||||||    
T  44433252 aaaattggccttgggggccaaaactgccacatatgcaaaacttagggggcggtttt 44433307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 53184784 - 53184831
Alignment:
Q  98 aaaatcgaaacttcgtaaaagttagggggagaaaactgctattaagcc 145  Q
    ||||||| ||||||||||||||||||| | ||||||||||||||||||    
T  53184784 aaaatcgcaacttcgtaaaagttagggagcgaaaactgctattaagcc 53184831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 27 - 80
Target Start/End: Original strand, 25154370 - 25154424
Alignment:
Q  27 aattggccttggagg-ccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||||||| || |||||||||||||||||||||||||||  ||||||||||    
T  25154370 aattggccttggggggccaaaactgctacagttgcaaaacttaaggggcggtttt 25154424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 28944155 - 28944105
Alignment:
Q  24 aaaaattggccttggaggccaaaactgctacagttgcaaaacttagagggc 74  Q
    ||||||||||||||| ||||||||||||||||  |||||||||||| ||||    
T  28944155 aaaaattggccttgggggccaaaactgctacatgtgcaaaacttagggggc 28944105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 8024902 - 8024845
Alignment:
Q  24 aaaaattggccttggagg-ccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||||| |||| || |||||||||||||||||||||||| ||| ||||||||||    
T  8024902 aaaaattggctttggggggccaaaactgctacagttgcaaaacgtagggggcggtttt 8024845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 25248873 - 25248926
Alignment:
Q  24 aaaaattggcctt-ggaggccaaaactgctacagttgcaaaacttagagggcgg 76  Q
    ||||||||||| | || ||||||||||||||||||||||||||||| |||||||    
T  25248873 aaaaattggccctagggggccaaaactgctacagttgcaaaacttaaagggcgg 25248926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 145
Target Start/End: Original strand, 28712668 - 28712775
Alignment:
Q  43 caaaactgctacagttgcaaaacttagagggcggttttatagnnnnnnn---agggg--caaaatcgaaacttcgtaaaagttagggggagaaaactgct 137  Q
    ||||||||||||||||||||||||||| ||||| |||| |||          |||||  |||||||  |||||| |||||||||||||| ||||||||||    
T  28712668 caaaactgctacagttgcaaaacttagggggcgattttgtagtttttttcttagggggccaaaatcacaacttcataaaagttagggggcgaaaactgct 28712767  T
Q  138 attaagcc 145  Q
    ||||||||    
T  28712768 attaagcc 28712775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 80
Target Start/End: Original strand, 86754 - 86806
Alignment:
Q  29 ttggccttggagg-ccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||||| || ||||||||||||||||||||||||||||  |||||||||    
T  86754 ttggccttgggggaccaaaactgctacagttgcaaaacttaggaggcggtttt 86806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 68
Target Start/End: Complemental strand, 1814675 - 1814631
Alignment:
Q  24 aaaaattggccttggaggccaaaactgctacagttgcaaaactta 68  Q
    ||||||||||||||| ||| |||||||||| ||||||||||||||    
T  1814675 aaaaattggccttgggggcaaaaactgctatagttgcaaaactta 1814631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 3193047 - 3193095
Alignment:
Q  97 caaaatcgaaacttcgtaaaagttagggggagaaaactgctattaagcc 145  Q
    |||||||| |||||| | |||||||||||| ||||||||||||||||||    
T  3193047 caaaatcgcaacttcttgaaagttagggggtgaaaactgctattaagcc 3193095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 14340781 - 14340733
Alignment:
Q  97 caaaatcgaaacttcgtaaaagttagggggagaaaactgctattaagcc 145  Q
    |||||||| |||||||| |||||||||||| ||||||| ||||||||||    
T  14340781 caaaatcgtaacttcgtgaaagttagggggcgaaaactcctattaagcc 14340733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 14856594 - 14856546
Alignment:
Q  97 caaaatcgaaacttcgtaaaagttagggggagaaaactgctattaagcc 145  Q
    |||||||| |||||||| |||||||||| | ||||||||||||||||||    
T  14856594 caaaatcgcaacttcgtgaaagttagggtgcgaaaactgctattaagcc 14856546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 80
Target Start/End: Original strand, 15978895 - 15978935
Alignment:
Q  40 ggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||||||||| ||||||||||||||| ||||||||||    
T  15978895 ggccaaaactgctatagttgcaaaacttagggggcggtttt 15978935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 17773218 - 17773170
Alignment:
Q  97 caaaatcgaaacttcgtaaaagttagggggagaaaactgctattaagcc 145  Q
    |||||||| ||||| || |||||||||||| ||||||||||||||||||    
T  17773218 caaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagcc 17773170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 19074519 - 19074471
Alignment:
Q  97 caaaatcgaaacttcgtaaaagttagggggagaaaactgctattaagcc 145  Q
    |||||||| ||||| || |||||||||||| ||||||||||||||||||    
T  19074519 caaaatcgcaacttagtgaaagttagggggcgaaaactgctattaagcc 19074471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 20432238 - 20432190
Alignment:
Q  97 caaaatcgaaacttcgtaaaagttagggggagaaaactgctattaagcc 145  Q
    |||| ||| |||||||||||||||||||||  |||||||||||||||||    
T  20432238 caaagtcgcaacttcgtaaaagttagggggcaaaaactgctattaagcc 20432190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 84
Target Start/End: Complemental strand, 86699 - 86640
Alignment:
Q  25 aaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggttttatag 84  Q
    |||||||| ||||| ||||||||||||||||  |||||||||||| | || |||||||||    
T  86699 aaaattggtcttgggggccaaaactgctacaagtgcaaaacttagggcgcagttttatag 86640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 44585974 - 44586029
Alignment:
Q  25 aaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||||| ||| |||||||||||| ||||  ||||||||||| ||||||||||    
T  44585974 aaaattggccgtgggggccaaaactgccacagaagcaaaacttagggggcggtttt 44586029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 75
Target Start/End: Complemental strand, 25843491 - 25843441
Alignment:
Q  25 aaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcg 75  Q
    |||||||||||||| | |||||||||| |||| |||||||||||| |||||    
T  25843491 aaaattggccttggggaccaaaactgccacagatgcaaaacttagggggcg 25843441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 35359181 - 35359227
Alignment:
Q  34 cttggaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    ||||| |||||||||||| | ||||||||||||||||||||| ||||    
T  35359181 cttgggggccaaaactgccatagttgcaaaacttagagggcgatttt 35359227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 3192968 - 3193025
Alignment:
Q  24 aaaaattggccttggagg-ccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||| |||||| || ||||||||| |||||||||||||||||| || |||||||    
T  3192968 aaaaattgaccttggggggccaaaactgttacagttgcaaaacttaggggtcggtttt 3193025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 69
Target Start/End: Original strand, 3916624 - 3916669
Alignment:
Q  24 aaaaattggccttggaggccaaaactgctacagttgcaaaacttag 69  Q
    ||||| ||| |||||||||||||||| ||||| |||||||||||||    
T  3916624 aaaaaatggtcttggaggccaaaactactacaattgcaaaacttag 3916669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 84
Target Start/End: Complemental strand, 14340861 - 14340800
Alignment:
Q  24 aaaaattggccttgg-aggccaaaactgctacagttgcaaaacttagagggcggttttatag 84  Q
    |||||||||| |||| ||||||||||||||||| |||||||||||   |||||||||| |||    
T  14340861 aaaaattggctttgggaggccaaaactgctacaattgcaaaacttgtggggcggttttgtag 14340800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 68
Target Start/End: Complemental strand, 14992749 - 14992704
Alignment:
Q  24 aaaaattggccttg-gaggccaaaactgctacagttgcaaaactta 68  Q
    |||||||||||||  | |||||||||||||||||||||||||||||    
T  14992749 aaaaattggccttaaggggccaaaactgctacagttgcaaaactta 14992704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 44585915 - 44585858
Alignment:
Q  24 aaaaattggccttggaggcc-aaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    ||||||||| ||||| || | ||||||||||||||||||||| |||| ||||||||||    
T  44585915 aaaaattggtcttggggggcgaaaactgctacagttgcaaaatttagggggcggtttt 44585858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 142
Target Start/End: Original strand, 46226953 - 46226998
Alignment:
Q  97 caaaatcgaaacttcgtaaaagttagggggagaaaactgctattaa 142  Q
    |||||||| |||||||| |||||||||||  |||||||||||||||    
T  46226953 caaaatcgcaacttcgtgaaagttaggggacgaaaactgctattaa 46226998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 80
Target Start/End: Complemental strand, 17773280 - 17773241
Alignment:
Q  40 ggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||||||| ||||||||||||||||| ||||||||||    
T  17773280 ggccaaaactgccacagttgcaaaacttag-gggcggtttt 17773241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 80
Target Start/End: Complemental strand, 19074581 - 19074542
Alignment:
Q  40 ggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||||||| ||||||||||||||||| ||||||||||    
T  19074581 ggccaaaactgccacagttgcaaaacttag-gggcggtttt 19074542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 84
Target Start/End: Complemental strand, 27178265 - 27178206
Alignment:
Q  24 aaaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggttttatag 84  Q
    ||||||||||||||| |||||||| ||||| | ||||||||||||| | |||||||| |||    
T  27178265 aaaaattggccttgg-ggccaaaattgctatatttgcaaaacttagggtgcggttttgtag 27178206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 28944231 - 28944279
Alignment:
Q  97 caaaatcgaaacttcgtaaaagttagggggagaaaactgctattaagcc 145  Q
    |||||||| ||||| ||||||||||||||   |||||||||||||||||    
T  28944231 caaaatcgcaacttagtaaaagttaggggacaaaaactgctattaagcc 28944279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 84
Target Start/End: Complemental strand, 48348381 - 48348321
Alignment:
Q  24 aaaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggttttatag 84  Q
    |||||||||| | | ||||||||||| || |||||||||||||||| || | |||||||||    
T  48348381 aaaaattggcttggaaggccaaaactactgcagttgcaaaacttaggggaccgttttatag 48348321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 2e-21; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 24 - 145
Target Start/End: Original strand, 12766402 - 12766528
Alignment:
Q  24 aaaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggttttatag---nnnnnnnagggg--caaaatcgaaacttcgtaaaag 118  Q
    ||||||||||||||| |||||||||||||||||||||||||||||  |||||||||| |||          |||||  |||||||| |||||||| ||||    
T  12766402 aaaaattggccttgggggccaaaactgctacagttgcaaaacttaaggggcggttttgtagttttttttttagggggccaaaatcgcaacttcgtgaaag 12766501  T
Q  119 ttagggggagaaaactgctattaagcc 145  Q
    |||||||| ||||||||||||||||||    
T  12766502 ttagggggtgaaaactgctattaagcc 12766528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 10727318 - 10727261
Alignment:
Q  24 aaaaattggccttggagg-ccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||| |||||    
T  10727318 aaaaattggccttggggggccaaaactgctacagttgcaaaacttagagggcagtttt 10727261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 40 - 143
Target Start/End: Original strand, 28011329 - 28011436
Alignment:
Q  40 ggccaaaactgctacagttgcaaaacttagagggcggttttatagnnnnnnn----aggggcaaaatcgaaacttcgtaaaagttagggggagaaaactg 135  Q
    |||||||||||||||||||||||||||||  |||||||||| |||           |||| |||||||| |||||||| |||||||||||| ||||||||    
T  28011329 ggccaaaactgctacagttgcaaaacttaaggggcggttttgtagttttttctcttagggacaaaatcgcaacttcgtgaaagttagggggtgaaaactg 28011428  T
Q  136 ctattaag 143  Q
    ||||||||    
T  28011429 ctattaag 28011436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 2853554 - 2853498
Alignment:
Q  24 aaaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    ||||||||||||||| | |||||||||||||||||||||||||||| || |||||||    
T  2853554 aaaaattggccttggggaccaaaactgctacagttgcaaaacttaggggacggtttt 2853498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 33401319 - 33401367
Alignment:
Q  97 caaaatcgaaacttcgtaaaagttagggggagaaaactgctattaagcc 145  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  33401319 caaaatcgtaacttcgtaaaagttagggggtgaaaactgctattaagcc 33401367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 10727382 - 10727437
Alignment:
Q  25 aaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||||||||| |||||||||||| |||| |||||||||||| ||||||||||    
T  10727382 aaaattggccttgggggccaaaactgccacagatgcaaaacttagggggcggtttt 10727437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 145
Target Start/End: Complemental strand, 239049 - 238930
Alignment:
Q  29 ttggccttggaggccaaaactgctacagttgcaaaacttagagggcggttttatagnnnnnnn-agggg--caaaatcgaaacttcgtaaaagttagggg 125  Q
    |||||||||| ||||||||||||||| |||||||||||||| || || |||| |||        ||| |  |||||||| |||||||| ||| |||||||    
T  239049 ttggccttgggggccaaaactgctacggttgcaaaacttaggggacgattttgtagttttttttaggaggtcaaaatcgcaacttcgtgaaaattagggg 238950  T
Q  126 gagaaaactgctattaagcc 145  Q
    | ||||||||||||||||||    
T  238949 gcgaaaactgctattaagcc 238930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 80
Target Start/End: Complemental strand, 3579711 - 3579665
Alignment:
Q  34 cttggaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    ||||| |||||||| ||||||||||||||||||||| ||||||||||    
T  3579711 cttgggggccaaaagtgctacagttgcaaaacttagggggcggtttt 3579665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 84
Target Start/End: Original strand, 2203350 - 2203399
Alignment:
Q  35 ttggaggccaaaactgctacagttgcaaaacttagagggcggttttatag 84  Q
    |||| |||||||||| ||||||||||||||||||| |||| |||||||||    
T  2203350 ttgggggccaaaactactacagttgcaaaacttagggggcagttttatag 2203399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 97 - 138
Target Start/End: Complemental strand, 18030985 - 18030944
Alignment:
Q  97 caaaatcgaaacttcgtaaaagttagggggagaaaactgcta 138  Q
    |||||||| |||||||| ||||||||||||||||||||||||    
T  18030985 caaaatcgcaacttcgtgaaagttagggggagaaaactgcta 18030944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 84
Target Start/End: Original strand, 26601666 - 26601707
Alignment:
Q  43 caaaactgctacagttgcaaaacttagagggcggttttatag 84  Q
    |||||||||||||||||||||| |||| ||||||||||||||    
T  26601666 caaaactgctacagttgcaaaatttagggggcggttttatag 26601707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 5003137 - 5003089
Alignment:
Q  97 caaaatcgaaacttcgtaaaagttagggggagaaaactgctattaagcc 145  Q
    |||||||| |||||| |||||||||||||| |||||||| |||||||||    
T  5003137 caaaatcgcaacttcttaaaagttagggggcgaaaactgttattaagcc 5003089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 68
Target Start/End: Original strand, 30349542 - 30349586
Alignment:
Q  24 aaaaattggccttggaggccaaaactgctacagttgcaaaactta 68  Q
    ||||||||||||||| | || ||||||||||||||||||||||||    
T  30349542 aaaaattggccttggggaccgaaactgctacagttgcaaaactta 30349586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 2853603 - 2853658
Alignment:
Q  25 aaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||||||||| |||||||||||| |||  || ||||||||| ||||||||||    
T  2853603 aaaattggccttgggggccaaaactgccacatatgaaaaacttagggggcggtttt 2853658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 32143384 - 32143329
Alignment:
Q  25 aaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||| ||||| |||||||||||| |||| |||||||||||  ||||||||||    
T  32143384 aaaattggtcttgggggccaaaactgccacaggtgcaaaacttaaggggcggtttt 32143329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 74
Target Start/End: Original strand, 32143454 - 32143488
Alignment:
Q  40 ggccaaaactgctacagttgcaaaacttagagggc 74  Q
    ||||| |||||||||||||||||||||||||||||    
T  32143454 ggccagaactgctacagttgcaaaacttagagggc 32143488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 69
Target Start/End: Original strand, 33401241 - 33401287
Alignment:
Q  24 aaaaattggccttggagg-ccaaaactgctacagttgcaaaacttag 69  Q
    ||||||||| ||||| || ||||||||||||||||||||||||||||    
T  33401241 aaaaattggtcttggggggccaaaactgctacagttgcaaaacttag 33401287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 69
Target Start/End: Complemental strand, 6036771 - 6036726
Alignment:
Q  24 aaaaattggccttggaggccaaaactgctacagttgcaaaacttag 69  Q
    ||||||||||||||| |||||||||||| |||  ||||||||||||    
T  6036771 aaaaattggccttgggggccaaaactgccacatatgcaaaacttag 6036726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 80
Target Start/End: Complemental strand, 2840900 - 2840860
Alignment:
Q  40 ggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||||||||||| ||||||||||||| || |||||||    
T  2840900 ggccaaaactgctacaattgcaaaacttaggggacggtttt 2840860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 3579643 - 3579595
Alignment:
Q  97 caaaatcgaaacttcgtaaaagttagggggagaaaactgctattaagcc 145  Q
    |||||||| |||||||| ||||||| |||  ||||||||||||||||||    
T  3579643 caaaatcgcaacttcgtgaaagttaagggacgaaaactgctattaagcc 3579595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 84
Target Start/End: Complemental strand, 26311501 - 26311461
Alignment:
Q  44 aaaactgctacagttgcaaaacttagagggcggttttatag 84  Q
    |||||||||||| ||||||||| |||||||| |||||||||    
T  26311501 aaaactgctacaattgcaaaacatagagggcagttttatag 26311461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 6e-18; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 19644990 - 19645040
Alignment:
Q  24 aaaaattggccttggaggccaaaactgctacagttgcaaaacttagagggc 74  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  19644990 aaaaattggctttggaggccaaaactgctacagttgcaaaacttagagggc 19645040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 15348144 - 15348200
Alignment:
Q  24 aaaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||    
T  15348144 aaaaattggccttgggggccaaaactgctacggttgcaaaacttagggggcggtttt 15348200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 36580400 - 36580344
Alignment:
Q  24 aaaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| || |||||||    
T  36580400 aaaaattggccttggtggccaaaactgctacagttgcaaaacttaggggacggtttt 36580344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 5172710 - 5172767
Alignment:
Q  24 aaaaattggccttggagg-ccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    ||||||||||||||| || |||||||||||||||||||||||||||| ||||||||||    
T  5172710 aaaaattggccttgggggaccaaaactgctacagttgcaaaacttagggggcggtttt 5172767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 26 - 80
Target Start/End: Original strand, 23746078 - 23746132
Alignment:
Q  26 aaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    ||||||||||| |  |||||||||||||||||||||||||||||||| |||||||    
T  23746078 aaattggccttaggtgccaaaactgctacagttgcaaaacttagaggacggtttt 23746132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 145
Target Start/End: Original strand, 36903459 - 36903581
Alignment:
Q  25 aaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggttttatag--nnnnnnnaggggcaaaatcgaaacttcgtaaaagttag 122  Q
    |||||||||||||| ||| |||||||||||||||||||||||||| | || ||||| |||         |||| |||||||| ||| | | |||||||||    
T  36903459 aaaattggccttgggggctaaaactgctacagttgcaaaacttagggtgcagttttgtagttttttttaagggccaaaatcgcaacattgaaaaagttag 36903558  T
Q  123 ggggagaaaactgctattaagcc 145  Q
    ||||  |||||||||||||||||    
T  36903559 ggggttaaaactgctattaagcc 36903581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 145
Target Start/End: Original strand, 4049908 - 4050035
Alignment:
Q  24 aaaaattggccttggagg-ccaaaactgctacagttgcaaaacttagagggcggttttatagnnnnnnn---agggg--caaaatcgaaacttcgtaaaa 117  Q
    ||||||||||||||| || |||||||||||||||||||||| ||||| |||||||||| |||          |||||  |||||||  |||||||| |||    
T  4049908 aaaaattggccttggggggccaaaactgctacagttgcaaaccttagggggcggttttgtagtttttttcttagggggccaaaatcacaacttcgtgaaa 4050007  T
Q  118 gttagggggagaaaactgctattaagcc 145  Q
    |||| |||| ||||||||||||||||||    
T  4050008 gttaaggggcgaaaactgctattaagcc 4050035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 145
Target Start/End: Complemental strand, 11373973 - 11373847
Alignment:
Q  24 aaaaattggccttgg-aggccaaaactgctacagttgcaaaacttagagggcggttttatag-----nnnnnnnagggg-caaaatcgaaacttcgtaaa 116  Q
    ||||||||||||||| ||||||||  ||||||||||||||||| ||||| |||||||| |||            ||||| ||| |||| |||||||||||    
T  11373973 aaaaattggccttgggaggccaaa--tgctacagttgcaaaacatagagagcggttttgtagttttttttccttaggggtcaagatcgcaacttcgtaaa 11373876  T
Q  117 agttagggggagaaaactgctattaagcc 145  Q
    |||||||||| ||||||||||||||||||    
T  11373875 agttagggggcgaaaactgctattaagcc 11373847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 17876423 - 17876471
Alignment:
Q  97 caaaatcgaaacttcgtaaaagttagggggagaaaactgctattaagcc 145  Q
    |||||||| |||||||| |||||||||||| ||||||||||||||||||    
T  17876423 caaaatcgtaacttcgtgaaagttagggggtgaaaactgctattaagcc 17876471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 142
Target Start/End: Original strand, 20185103 - 20185226
Alignment:
Q  24 aaaaattggccttggagg-ccaaaactgctacagttgcaaaacttagagggcggttttatag--nnnnnnnagggg--caaaatcgaaacttcgtaaaag 118  Q
    ||||||| ||||||| || ||||||||||||||||||||||||||||  ||||||||| |||         |||||  |||||||| |||||||| ||||    
T  20185103 aaaaattagccttggggggccaaaactgctacagttgcaaaacttaggaggcggttttgtagtttttttttagggggtcaaaatcgcaacttcgtgaaag 20185202  T
Q  119 ttagggggagaaaactgctattaa 142  Q
    |||||||| ||||||| |||||||    
T  20185203 ttagggggcgaaaactactattaa 20185226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 84
Target Start/End: Complemental strand, 6726378 - 6726323
Alignment:
Q  29 ttggccttggaggccaaaactgctacagttgcaaaacttagagggcggttttatag 84  Q
    |||||||||| ||||||||||||||||||| |||||| ||||||| | ||||||||    
T  6726378 ttggccttgggggccaaaactgctacagtttcaaaacatagagggggcttttatag 6726323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 18504369 - 18504314
Alignment:
Q  25 aaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||||||| |||||||||||||| |||  |||||||||||| ||||||||||    
T  18504369 aaaattggccttagaggccaaaactgccacatatgcaaaacttagggggcggtttt 18504314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 68
Target Start/End: Complemental strand, 19644928 - 19644885
Alignment:
Q  25 aaaattggccttggaggccaaaactgctacagttgcaaaactta 68  Q
    |||||||| |||||||||||||||||||||||||| ||||||||    
T  19644928 aaaattggtcttggaggccaaaactgctacagttgtaaaactta 19644885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 84
Target Start/End: Complemental strand, 35250244 - 35250185
Alignment:
Q  25 aaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggttttatag 84  Q
    |||||||||||||| | |||||||||  | || |||||||||||||||||||||||||||    
T  35250244 aaaattggccttggggtccaaaactgtcaaagatgcaaaacttagagggcggttttatag 35250185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 21748082 - 21748128
Alignment:
Q  99 aaatcgaaacttcgtaaaagttagggggagaaaactgctattaagcc 145  Q
    |||||| |||||||| |||||||||||| ||||||||||||||||||    
T  21748082 aaatcgcaacttcgtgaaagttagggggcgaaaactgctattaagcc 21748128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 143
Target Start/End: Original strand, 8074142 - 8074187
Alignment:
Q  98 aaaatcgaaacttcgtaaaagttagggggagaaaactgctattaag 143  Q
    ||||||| |||||||| |||||||||||| ||||||||||||||||    
T  8074142 aaaatcgtaacttcgtgaaagttagggggcgaaaactgctattaag 8074187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 145
Target Start/End: Complemental strand, 28350242 - 28350116
Alignment:
Q  25 aaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggttttatagnnnnnnn----agggg--caaaatcgaaacttcgtaaaag 118  Q
    |||||||| ||||| |||||||||||| ||||  ||||||||||| |||||||||| |||           |||||  |||||||| |||||||| ||||    
T  28350242 aaaattggtcttgggggccaaaactgccacaggggcaaaacttagggggcggttttgtagttttttttcttagggggccaaaatcgtaacttcgtgaaag 28350143  T
Q  119 ttagggggagaaaactgctattaagcc 145  Q
    ||||||||  |||||||||||||||||    
T  28350142 ttagggggctaaaactgctattaagcc 28350116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 35250306 - 35250363
Alignment:
Q  24 aaaaattggccttggagg-ccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    ||||||||| ||||| || |||||||||||||||||||||||||||| |||| |||||    
T  35250306 aaaaattggtcttggggggccaaaactgctacagttgcaaaacttagggggcagtttt 35250363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 8074061 - 8074117
Alignment:
Q  25 aaaattggccttggagg-ccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    ||||||||| ||||||| |||||||||||||||||||||||||| | || |||||||    
T  8074061 aaaattggcgttggagggccaaaactgctacagttgcaaaactttggggacggtttt 8074117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 68
Target Start/End: Complemental strand, 15107119 - 15107075
Alignment:
Q  24 aaaaattggccttggaggccaaaactgctacagttgcaaaactta 68  Q
    ||||||||| ||||| |||||||||||||| ||||||||||||||    
T  15107119 aaaaattgggcttgggggccaaaactgctatagttgcaaaactta 15107075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 15348224 - 15348272
Alignment:
Q  97 caaaatcgaaacttcgtaaaagttagggggagaaaactgctattaagcc 145  Q
    |||||||| |||||||| |||||||||||| ||| ||||||||||||||    
T  15348224 caaaatcgcaacttcgtgaaagttagggggtgaatactgctattaagcc 15348272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 80
Target Start/End: Complemental strand, 18186570 - 18186510
Alignment:
Q  21 acaaaaaattggccttg-gaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||||||  |||| |||||||||||||||| |||||||||||||||  |||||||||    
T  18186570 acaaaaaattgatcttgagaggccaaaactgctatagttgcaaaacttaggaggcggtttt 18186510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 20505275 - 20505323
Alignment:
Q  97 caaaatcgaaacttcgtaaaagttagggggagaaaactgctattaagcc 145  Q
    |||||||| |||||| |||||| ||||||| ||||||||||||||||||    
T  20505275 caaaatcgcaacttcataaaagctagggggtgaaaactgctattaagcc 20505323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 80
Target Start/End: Original strand, 28472582 - 28472621
Alignment:
Q  40 ggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  28472582 ggccaaaactgctacagttgcaaaacttag-gggcggtttt 28472621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 41243830 - 41243886
Alignment:
Q  24 aaaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||||| |||  |||||||||| ||||||||||||||||||| ||||| ||||    
T  41243830 aaaaattggcattgagggccaaaactactacagttgcaaaacttagtgggcgatttt 41243886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 84
Target Start/End: Complemental strand, 8074000 - 8073941
Alignment:
Q  25 aaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggttttatag 84  Q
    |||||||||||||| |||||||||||| |||  ||||||||||| ||| || ||||||||    
T  8074000 aaaattggccttgggggccaaaactgccacatatgcaaaacttaaaggccgattttatag 8073941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 15029187 - 15029132
Alignment:
Q  25 aaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    ||||||| |||||| |||||||||||| |||  |||||||||||| ||||||||||    
T  15029187 aaaattgaccttgggggccaaaactgccacatgtgcaaaacttagggggcggtttt 15029132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 15107180 - 15107235
Alignment:
Q  25 aaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    ||||||||| ||||||||||||||||| |||  |||||||||||| | ||||||||    
T  15107180 aaaattggcattggaggccaaaactgccacaaatgcaaaacttagggagcggtttt 15107235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 17876295 - 17876240
Alignment:
Q  25 aaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||||||||||||||||||| || |||| ||||||| |||| |||| |||||    
T  17876295 aaaattggccttggaggccaaaaccgccacagatgcaaaatttagggggcagtttt 17876240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 84
Target Start/End: Original strand, 18186639 - 18186698
Alignment:
Q  25 aaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggttttatag 84  Q
    |||||||||||||| | |||||||||| |||| |||||||||||  || |||||||||||    
T  18186639 aaaattggccttggggaccaaaactgccacagatgcaaaacttaagggacggttttatag 18186698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 28350333 - 28350386
Alignment:
Q  25 aaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||||||||| |||||||||||| |||| |||||||||||| ||||||||||    
T  28350333 aaaattggccttgg-ggccaaaactgccacaggtgcaaaacttag-gggcggtttt 28350386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 69
Target Start/End: Complemental strand, 11374077 - 11374031
Alignment:
Q  24 aaaaattggccttggagg-ccaaaactgctacagttgcaaaacttag 69  Q
    |||||||||| ||||||| |||||||||||| |||||||||||||||    
T  11374077 aaaaattggctttggagggccaaaactgctaaagttgcaaaacttag 11374031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 72
Target Start/End: Original strand, 23826224 - 23826254
Alignment:
Q  42 ccaaaactgctacagttgcaaaacttagagg 72  Q
    |||||||||||||||||||||||||||||||    
T  23826224 ccaaaactgctacagttgcaaaacttagagg 23826254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 68
Target Start/End: Complemental strand, 29834279 - 29834245
Alignment:
Q  34 cttggaggccaaaactgctacagttgcaaaactta 68  Q
    |||||||| ||||||||||||||||||||||||||    
T  29834279 cttggaggtcaaaactgctacagttgcaaaactta 29834245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 80
Target Start/End: Original strand, 3247376 - 3247417
Alignment:
Q  39 aggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||||||||||||||||||||| ||||  |||||||||    
T  3247376 aggccaaaactgctacagttgcaaaatttaggaggcggtttt 3247417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 68
Target Start/End: Original strand, 17876356 - 17876389
Alignment:
Q  35 ttggaggccaaaactgctacagttgcaaaactta 68  Q
    |||| |||||||||||||||||||||||||||||    
T  17876356 ttgggggccaaaactgctacagttgcaaaactta 17876389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 68
Target Start/End: Original strand, 18504427 - 18504472
Alignment:
Q  24 aaaaattggccttgg-aggccaaaactgctacagttgcaaaactta 68  Q
    |||||||||| |||| ||||||||||||||||| ||||||||||||    
T  18504427 aaaaattggcattgggaggccaaaactgctacaattgcaaaactta 18504472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 28785885 - 28785828
Alignment:
Q  24 aaaaattggccttggagg-ccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    ||||||||||||| | || |||||||| | ||||||||||||||||| ||||||||||    
T  28785885 aaaaattggcctttgtgggccaaaactacaacagttgcaaaacttagggggcggtttt 28785828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 69
Target Start/End: Original strand, 3382025 - 3382053
Alignment:
Q  41 gccaaaactgctacagttgcaaaacttag 69  Q
    |||||||||||||||||||||||||||||    
T  3382025 gccaaaactgctacagttgcaaaacttag 3382053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 14247342 - 14247294
Alignment:
Q  97 caaaatcgaaacttcgtaaaagttagggggagaaaactgctattaagcc 145  Q
    |||||||  |||||||| ||||||||| || ||||||||||||||||||    
T  14247342 caaaatcacaacttcgtgaaagttaggtggcgaaaactgctattaagcc 14247294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 142
Target Start/End: Original strand, 23746161 - 23746205
Alignment:
Q  98 aaaatcgaaacttcgtaaaagttagggggagaaaactgctattaa 142  Q
    ||||||| ||||||||||||||||||||  |||| ||||||||||    
T  23746161 aaaatcgcaacttcgtaaaagttaggggacgaaagctgctattaa 23746205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 23826288 - 23826336
Alignment:
Q  97 caaaatcgaaacttcgtaaaagttagggggagaaaactgctattaagcc 145  Q
    |||||||| |||||||| |||||||||||   |||||||||||||||||    
T  23826288 caaaatcgcaacttcgtgaaagttaggggacaaaaactgctattaagcc 23826336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 141
Target Start/End: Complemental strand, 28785804 - 28785760
Alignment:
Q  97 caaaatcgaaacttcgtaaaagttagggggagaaaactgctatta 141  Q
    |||||||| |||||||| |||||||||||| | ||||||||||||    
T  28785804 caaaatcgtaacttcgtgaaagttagggggcggaaactgctatta 28785760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 36580322 - 36580274
Alignment:
Q  97 caaaatcgaaacttcgtaaaagttagggggagaaaactgctattaagcc 145  Q
    |||||||  |||||||| |||||||||||  ||||||||||||||||||    
T  36580322 caaaatcacaacttcgtgaaagttaggggccgaaaactgctattaagcc 36580274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 44312793 - 44312745
Alignment:
Q  97 caaaatcgaaacttcgtaaaagttagggggagaaaactgctattaagcc 145  Q
    |||||||| |||||||||||||||||| |  |||||||| |||||||||    
T  44312793 caaaatcgcaacttcgtaaaagttaggagacgaaaactgttattaagcc 44312745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 31080667 - 31080723
Alignment:
Q  24 aaaaattggcctt-ggaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  31080667 aaaaattggccttaggagg-caaaactgctacagttgcaaaacttagagggcggtttt 31080723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 80
Target Start/End: Original strand, 36798359 - 36798419
Alignment:
Q  21 acaaaaaattggccttggagg-ccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    ||||||||||||| |||| || |||||||||||||||||||||||||||| ||||||||||    
T  36798359 acaaaaaattggctttggggggccaaaactgctacagttgcaaaacttagggggcggtttt 36798419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 142
Target Start/End: Complemental strand, 3333819 - 3333695
Alignment:
Q  24 aaaaattggccttggagg-ccaaaactgctacagttgcaaaacttagagggcggttttatag---nnnnnnnagggg--caaaatcgaaacttcgtaaaa 117  Q
    ||||||||||||||| || |||||||||||||| |||||||||||||||| ||||||| |||          |||||  |||||||| |||||| | |||    
T  3333819 aaaaattggccttggggggccaaaactgctacatttgcaaaacttagaggacggttttgtagtttttttcttaggggatcaaaatcgcaacttcatgaaa 3333720  T
Q  118 gttagggggagaaaactgctattaa 142  Q
    ||||||||| |||||||||||||||    
T  3333719 gttagggggcgaaaactgctattaa 3333695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 69
Target Start/End: Original strand, 22300798 - 22300844
Alignment:
Q  24 aaaaattggccttggagg-ccaaaactgctacagttgcaaaacttag 69  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||    
T  22300798 aaaaattggccttggagggccaaaactgctacagttgcaaaacttag 22300844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 28446191 - 28446247
Alignment:
Q  24 aaaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    ||||||||  ||||| |||||||||||||||||||||||||||||| || |||||||    
T  28446191 aaaaattgatcttgggggccaaaactgctacagttgcaaaacttaggggacggtttt 28446247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 2974759 - 2974704
Alignment:
Q  25 aaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    ||||||||| |||| |||||||||||| |||| |||||||||||| ||||||||||    
T  2974759 aaaattggcattgggggccaaaactgccacagatgcaaaacttagggggcggtttt 2974704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 2974819 - 2974874
Alignment:
Q  24 aaaaattggcctt-ggaggccaaaactgctacagttgcaaaacttagagggcggtt 78  Q
    ||||||||||||| || ||||||||||||||||| |||||||||||| ||||||||    
T  2974819 aaaaattggccttagggggccaaaactgctacaggtgcaaaacttagggggcggtt 2974874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 9852972 - 9853027
Alignment:
Q  24 aaaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggttt 79  Q
    |||||||| | |||| ||||||||||| |||||||||||||||||| |||||||||    
T  9852972 aaaaattgactttgggggccaaaactgatacagttgcaaaacttagggggcggttt 9853027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 12406228 - 12406283
Alignment:
Q  25 aaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||||||||| |||||||||||| |||| || ||||||||| ||||||||||    
T  12406228 aaaattggccttgggggccaaaactgccacagatgtaaaacttagggggcggtttt 12406283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 31080602 - 31080547
Alignment:
Q  25 aaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||||||||| |||||||||||| |||| |||||||||||| ||| ||||||    
T  31080602 aaaattggccttgggggccaaaactgccacagatgcaaaacttagggggtggtttt 31080547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 142
Target Start/End: Complemental strand, 3999213 - 3999089
Alignment:
Q  24 aaaaattggccttg-gaggccaaaactgctacagttgcaaaacttagagggcggttttatagnnnnnnn---agggg--caaaatcgaaacttcgtaaaa 117  Q
    |||||||||||||| | ||||||||||||||||||||||||||||| | | || |||| |||          |||||  |||||||| |||||||| |||    
T  3999213 aaaaattggccttgaggggccaaaactgctacagttgcaaaacttataagtcgattttgtagtttttttcttagggggtcaaaatcgcaacttcgtgaaa 3999114  T
Q  118 gttagggggagaaaactgctattaa 142  Q
    ||||||||| |||||||||||||||    
T  3999113 gttagggggcgaaaactgctattaa 3999089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 69
Target Start/End: Complemental strand, 6130382 - 6130336
Alignment:
Q  24 aaaaattggccttggagg-ccaaaactgctacagttgcaaaacttag 69  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||    
T  6130382 aaaaattggccttggggggccaaaactgctacagttgcaaaacttag 6130336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 69
Target Start/End: Complemental strand, 32391846 - 32391800
Alignment:
Q  24 aaaaattggccttggagg-ccaaaactgctacagttgcaaaacttag 69  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||    
T  32391846 aaaaattggccttggggggccaaaactgctacagttgcaaaacttag 32391800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 69
Target Start/End: Complemental strand, 40276146 - 40276100
Alignment:
Q  24 aaaaattggccttggagg-ccaaaactgctacagttgcaaaacttag 69  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||    
T  40276146 aaaaattggccttggggggccaaaactgctacagttgcaaaacttag 40276100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 12406168 - 12406112
Alignment:
Q  24 aaaaattggccttggagg-ccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    ||||||||||||||| || ||||||||| |||||||||||||||||| ||||||||||    
T  12406168 aaaaattggccttggggggccaaaactg-tacagttgcaaaacttagggggcggtttt 12406112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 68
Target Start/End: Original strand, 21066526 - 21066571
Alignment:
Q  24 aaaaattggccttggagg-ccaaaactgctacagttgcaaaactta 68  Q
    ||||||||||||||| || |||||||||||||||||||||||||||    
T  21066526 aaaaattggccttggggggccaaaactgctacagttgcaaaactta 21066571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 97 - 142
Target Start/End: Complemental strand, 43098076 - 43098031
Alignment:
Q  97 caaaatcgaaacttcgtaaaagttagggggagaaaactgctattaa 142  Q
    |||||||| ||||||||||||||||||||  |||||||||||||||    
T  43098076 caaaatcgcaacttcgtaaaagttaggggacgaaaactgctattaa 43098031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 2974900 - 2974948
Alignment:
Q  97 caaaatcgaaacttcgtaaaagttagggggagaaaactgctattaagcc 145  Q
    |||||||| |||||||| ||||||||||||  |||||||||||||||||    
T  2974900 caaaatcgcaacttcgtgaaagttagggggcaaaaactgctattaagcc 2974948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 80
Target Start/End: Complemental strand, 19340871 - 19340831
Alignment:
Q  40 ggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||||||||||||||||||||||||| ||||| ||||    
T  19340871 ggccaaaactgctacagttgcaaaacttagggggcgatttt 19340831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 80
Target Start/End: Original strand, 20512402 - 20512442
Alignment:
Q  40 ggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||||||||| ||||||||||||||||||||| ||||    
T  20512402 ggccaaaactgctaaagttgcaaaacttagagggcgatttt 20512442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 80
Target Start/End: Complemental strand, 30603723 - 30603683
Alignment:
Q  40 ggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||||||||||||||||||||||||| |||| |||||    
T  30603723 ggccaaaactgctacagttgcaaaacttagggggcagtttt 30603683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 9852912 - 9852857
Alignment:
Q  25 aaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    ||||||||||||||  ||||||||||| |||| |||||||||||| ||||| ||||    
T  9852912 aaaattggccttgggagccaaaactgccacagatgcaaaacttagggggcgatttt 9852857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 16132870 - 16132815
Alignment:
Q  25 aaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||||||||| | |||||||||| | || |||||||||||| ||||||||||    
T  16132870 aaaattggccttggggaccaaaactgccataggtgcaaaacttagggggcggtttt 16132815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 19131688 - 19131743
Alignment:
Q  25 aaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||||||| | |||||||||||  |||| |||||||||||| ||||||||||    
T  19131688 aaaattggccttcggggccaaaactgtcacagatgcaaaacttagggggcggtttt 19131743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 25910849 - 25910794
Alignment:
Q  25 aaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    ||||||| |||||| |||||||||||| |||| ||||||| |||||||| ||||||    
T  25910849 aaaattgaccttgggggccaaaactgccacaggtgcaaaatttagagggtggtttt 25910794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 37897906 - 37897960
Alignment:
Q  25 aaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||| |||||||||||||||||| |||  |||||||||||| ||||||||||    
T  37897906 aaaattggtcttggaggccaaaactgccacatatgcaaaacttag-gggcggtttt 37897960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 144
Target Start/End: Complemental strand, 39574287 - 39574240
Alignment:
Q  97 caaaatcgaaacttcgtaaaagttagggggagaaaactgctattaagc 144  Q
    |||||||| |||||||| |||||||| ||| |||||||||||||||||    
T  39574287 caaaatcgcaacttcgtgaaagttagagggcgaaaactgctattaagc 39574240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 80
Target Start/End: Complemental strand, 36798296 - 36798242
Alignment:
Q  26 aaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    ||||||| ||||| |||||||||||| |||| |||||||||||| ||| ||||||    
T  36798296 aaattggtcttgggggccaaaactgccacagatgcaaaacttagggggtggtttt 36798242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 69
Target Start/End: Complemental strand, 20629864 - 20629819
Alignment:
Q  24 aaaaattggccttggaggccaaaactgctacagttgcaaaacttag 69  Q
    ||||||||||||||| | ||||||||| ||||||| ||||||||||    
T  20629864 aaaaattggccttggggaccaaaactgttacagtttcaaaacttag 20629819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 143
Target Start/End: Original strand, 25911000 - 25911037
Alignment:
Q  106 aacttcgtaaaagttagggggagaaaactgctattaag 143  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  25911000 aacttcgtgaaagttagggggcgaaaactgctattaag 25911037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 35166558 - 35166607
Alignment:
Q  97 caaaatcgaaacttcgtaaaagtta-gggggagaaaactgctattaagcc 145  Q
    |||||||| |||||||| ||||||| ||||| ||||||||||||||||||    
T  35166558 caaaatcgcaacttcgtgaaagttaggggggcgaaaactgctattaagcc 35166607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 35877466 - 35877523
Alignment:
Q  24 aaaaattggccttgga-ggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    ||||||||||| |||| || |||||| | |||||||||||||||||| ||||||||||    
T  35877466 aaaaattggccctggaaggtcaaaaccgttacagttgcaaaacttagggggcggtttt 35877523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 37897845 - 37897788
Alignment:
Q  24 aaaaattggcctt-ggaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    ||||||||| ||| || ||||||||| |||||| ||||||||||||| ||||||||||    
T  37897845 aaaaattggtcttcgggggccaaaacagctacaattgcaaaacttagggggcggtttt 37897788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 69
Target Start/End: Complemental strand, 40133031 - 40132986
Alignment:
Q  24 aaaaattggccttggaggccaaaactgctacagttgcaaaacttag 69  Q
    ||||||||||||||||| ||||||| || ||| |||||||||||||    
T  40133031 aaaaattggccttggagaccaaaaccgccacaattgcaaaacttag 40132986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 20512465 - 20512513
Alignment:
Q  97 caaaatcgaaacttcgtaaaagttagggggagaaaactgctattaagcc 145  Q
    |||||||| |||||||| ||||||| | || ||||||||||||||||||    
T  20512465 caaaatcgcaacttcgtgaaagttaagaggcgaaaactgctattaagcc 20512513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 29 - 145
Target Start/End: Original strand, 14489404 - 14489524
Alignment:
Q  29 ttggccttggaggccaaaactgctacagttgcaaaacttagagggcggttttatagnnnnnnn---aggggc-aaaatcgaaacttcgtaaaagttaggg 124  Q
    |||||||||| |||||||||||| ||||||||||||||||| ||| | |||| |||          |||||| ||||||| |||||||| ||||||||||    
T  14489404 ttggccttgggggccaaaactgccacagttgcaaaacttagggggtgattttgtagtttttttcttaggggccaaaatcgcaacttcgtgaaagttaggg 14489503  T
Q  125 ggagaaaactgctattaagcc 145  Q
    || ||||||||||||||||||    
T  14489504 ggcgaaaactgctattaagcc 14489524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 69
Target Start/End: Original strand, 31827720 - 31827765
Alignment:
Q  24 aaaaattggccttggaggccaaaactgctacagttgcaaaacttag 69  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  31827720 aaaaattggccttgggggccaaaactgctacagttgcaaaacttag 31827765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 5470454 - 5470398
Alignment:
Q  24 aaaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    ||||||||||||||| |||||||||||||||| ||||||||||||| |||| |||||    
T  5470454 aaaaattggccttgggggccaaaactgctacaattgcaaaacttagggggcagtttt 5470398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 6592921 - 6592977
Alignment:
Q  24 aaaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||||| |||| |||||||||||||||||||||||||||||| |||| |||||    
T  6592921 aaaaattggctttgggggccaaaactgctacagttgcaaaacttagggggcagtttt 6592977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 40 - 145
Target Start/End: Original strand, 34679296 - 34679404
Alignment:
Q  40 ggccaaaactgctacagttgcaaaacttagagggcggttttatag-nnnnnnnagggg--caaaatcgaaacttcgtaaaagttagggggagaaaactgc 136  Q
    |||||||||||||||||||||||||||||| |||||||||| |||        |||||  |||||||  |||||||| ||||||||||||  ||||||||    
T  34679296 ggccaaaactgctacagttgcaaaacttagggggcggttttgtagttttttttagggggccaaaatcacaacttcgtgaaagttagggggcaaaaactgc 34679395  T
Q  137 tattaagcc 145  Q
    |||||||||    
T  34679396 tattaagcc 34679404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 84
Target Start/End: Complemental strand, 25333624 - 25333565
Alignment:
Q  25 aaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggttttatag 84  Q
    |||||||||||||||| |||||||||| |||| |||||||||||| ||| ||||||||||    
T  25333624 aaaattggccttggagaccaaaactgccacaggtgcaaaacttagggggtggttttatag 25333565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 39918628 - 39918685
Alignment:
Q  24 aaaaattggccttggagg-ccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    ||||||||||||||| || |||||| ||||||||||||||||||||| ||||||||||    
T  39918628 aaaaattggccttggggggccaaaattgctacagttgcaaaacttagggggcggtttt 39918685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 68
Target Start/End: Complemental strand, 4576670 - 4576626
Alignment:
Q  24 aaaaattggccttggaggccaaaactgctacagttgcaaaactta 68  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||    
T  4576670 aaaaattggtcttgggggccaaaactgctacagttgcaaaactta 4576626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 40 - 80
Target Start/End: Original strand, 6510203 - 6510243
Alignment:
Q  40 ggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  6510203 ggccaaaactgctacagttgcaaaacttagggggcggtttt 6510243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 68
Target Start/End: Original strand, 8857234 - 8857278
Alignment:
Q  24 aaaaattggccttggaggccaaaactgctacagttgcaaaactta 68  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||    
T  8857234 aaaaattgaccttggaggccaaaactgctatagttgcaaaactta 8857278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 18709295 - 18709247
Alignment:
Q  97 caaaatcgaaacttcgtaaaagttagggggagaaaactgctattaagcc 145  Q
    ||||||||||||||||| |||||||||||  ||||||||||||||||||    
T  18709295 caaaatcgaaacttcgtgaaagttaggggacgaaaactgctattaagcc 18709247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 35718843 - 35718899
Alignment:
Q  24 aaaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||| |||| | |||||||||||||||||||||||||||||| || |||||||    
T  35718843 aaaaattgaccttaggggccaaaactgctacagttgcaaaacttaggggacggtttt 35718899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 14489339 - 14489284
Alignment:
Q  25 aaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||| |||||||| ||||||||| |||| |||||||||||| ||||||||||    
T  14489339 aaaattggtcttggaggtcaaaactgccacaggtgcaaaacttagggggcggtttt 14489284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 14943733 - 14943788
Alignment:
Q  25 aaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||| ||||||| |||||||| ||| |||| |||||||||||||||||||||||    
T  14943733 aaaattagccttgggggccaaaaatgccacaggtgcaaaacttagagggcggtttt 14943788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 32969794 - 32969841
Alignment:
Q  98 aaaatcgaaacttcgtaaaagttagggggagaaaactgctattaagcc 145  Q
    |||||||||||| ||| |||||||||||| ||||||||||||||||||    
T  32969794 aaaatcgaaactccgtgaaagttagggggcgaaaactgctattaagcc 32969841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 97 - 142
Target Start/End: Complemental strand, 2609126 - 2609081
Alignment:
Q  97 caaaatcgaaacttcgtaaaagttagggggagaaaactgctattaa 142  Q
    ||||||| |||||||||||||||||||||| ||||||| |||||||    
T  2609126 caaaatcaaaacttcgtaaaagttagggggcgaaaactactattaa 2609081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 78
Target Start/End: Original strand, 16043210 - 16043263
Alignment:
Q  25 aaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggtt 78  Q
    |||||||||||||| |||||||||||| |||| |||||||| ||| ||||||||    
T  16043210 aaaattggccttgggggccaaaactgccacagatgcaaaacatagggggcggtt 16043263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 19206268 - 19206211
Alignment:
Q  24 aaaaattggccttggagg-ccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    ||||||||||||||| || |||||||||||||||||| ||||||||| ||| ||||||    
T  19206268 aaaaattggccttggggggccaaaactgctacagttgtaaaacttagggggtggtttt 19206211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 145
Target Start/End: Original strand, 31827800 - 31827845
Alignment:
Q  100 aatcgaaacttcgtaaaagttagggggagaaaactgctattaagcc 145  Q
    ||||| ||||||||||||||||||||| ||||| ||||||||||||    
T  31827800 aatcgcaacttcgtaaaagttagggggcgaaaattgctattaagcc 31827845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 34100848 - 34100807
Alignment:
Q  43 caaaactgctacagttgcaaaacttagagggcggttttatag 84  Q
    ||||||||||||||||||||||||||| || |||||||||||    
T  34100848 caaaactgctacagttgcaaaacttaggggacggttttatag 34100807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 43028980 - 43029037
Alignment:
Q  24 aaaaattggccttg-gaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||||||||| | |||||||||||||||| ||| ||||||||| ||||||||||    
T  43028980 aaaaattggccttgtggggccaaaactgctacaattgtaaaacttagggggcggtttt 43029037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 80
Target Start/End: Complemental strand, 25508 - 25456
Alignment:
Q  28 attggccttggaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    ||||||||||| || ||||||||| |||| |||||||||||| ||||||||||    
T  25508 attggccttgggggtcaaaactgccacaggtgcaaaacttagggggcggtttt 25456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 16043291 - 16043339
Alignment:
Q  97 caaaatcgaaacttcgtaaaagttagggggagaaaactgctattaagcc 145  Q
    |||||||| |||||||| |||||||||||| |||||||||| |||||||    
T  16043291 caaaatcgtaacttcgtgaaagttagggggcgaaaactgctgttaagcc 16043339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 80
Target Start/End: Original strand, 32969728 - 32969768
Alignment:
Q  40 ggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    ||||||||||||||| |||||||||||||| ||||||||||    
T  32969728 ggccaaaactgctactgttgcaaaacttagggggcggtttt 32969768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 68
Target Start/End: Original strand, 37803318 - 37803362
Alignment:
Q  24 aaaaattggccttggaggccaaaactgctacagttgcaaaactta 68  Q
    ||||||||||||||| |  ||||||||||||||||||||||||||    
T  37803318 aaaaattggccttggggatcaaaactgctacagttgcaaaactta 37803362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 37803398 - 37803446
Alignment:
Q  97 caaaatcgaaacttcgtaaaagttagggggagaaaactgctattaagcc 145  Q
    |||||||| ||||||||||||||||||||| ||||| || |||||||||    
T  37803398 caaaatcgcaacttcgtaaaagttagggggcgaaaattgttattaagcc 37803446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 5470525 - 5470580
Alignment:
Q  25 aaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||||||||| |||||||||||| |||| || ||||||||  ||||||||||    
T  5470525 aaaattggccttgggggccaaaactgccacagatgtaaaacttaaggggcggtttt 5470580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 34760973 - 34760918
Alignment:
Q  25 aaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||| ||||| |||||||||||| |||  |||||||||||| ||||||||||    
T  34760973 aaaattggtcttgggggccaaaactgccacatatgcaaaacttagggggcggtttt 34760918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 64
Target Start/End: Complemental strand, 35718771 - 35718732
Alignment:
Q  25 aaaattggccttggaggccaaaactgctacagttgcaaaa 64  Q
    ||||||||||||||||||||||||||| |||| |||||||    
T  35718771 aaaattggccttggaggccaaaactgccacagatgcaaaa 35718732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 37431669 - 37431614
Alignment:
Q  25 aaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||||||||| |||||||||||| |||  |||||||||||| ||||| ||||    
T  37431669 aaaattggccttgggggccaaaactgccacaaatgcaaaacttagtgggcgatttt 37431614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 44617927 - 44617982
Alignment:
Q  25 aaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||| ||||| |||||||||||| |||  |||||||||||| ||||||||||    
T  44617927 aaaattggtcttgggggccaaaactgccacaaatgcaaaacttagggggcggtttt 44617982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 70
Target Start/End: Complemental strand, 18969222 - 18969176
Alignment:
Q  24 aaaaattggccttggaggccaaaactgctacagttgcaaaacttaga 70  Q
    |||||||||| |||| || ||||||||||||| ||||||||||||||    
T  18969222 aaaaattggctttgggggtcaaaactgctacaattgcaaaacttaga 18969176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 69
Target Start/End: Original strand, 4925650 - 4925679
Alignment:
Q  40 ggccaaaactgctacagttgcaaaacttag 69  Q
    ||||||||||||||||||||||||||||||    
T  4925650 ggccaaaactgctacagttgcaaaacttag 4925679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 142
Target Start/End: Original strand, 37431803 - 37431848
Alignment:
Q  97 caaaatcgaaacttcgtaaaagttagggggagaaaactgctattaa 142  Q
    |||||||| ||||||||  ||||||||||| |||||||||||||||    
T  37431803 caaaatcgcaacttcgtggaagttagggggcgaaaactgctattaa 37431848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 6592772 - 6592724
Alignment:
Q  97 caaaatcgaaacttcgtaaaagttagggggagaaaactgctattaagcc 145  Q
    |||||||| ||||| | |||||||||||||  |||||||||||||||||    
T  6592772 caaaatcgcaactttggaaaagttagggggctaaaactgctattaagcc 6592724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 19895661 - 19895613
Alignment:
Q  97 caaaatcgaaacttcgtaaaagttagggggagaaaactgctattaagcc 145  Q
    |||||||| || |||||||||||||||||  |||||||| |||||||||    
T  19895661 caaaatcgcaatttcgtaaaagttaggggacgaaaactgatattaagcc 19895613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 68
Target Start/End: Complemental strand, 19895740 - 19895697
Alignment:
Q  24 aaaaattggccttggaggccaaaactgctacagttgcaaaactta 68  Q
    ||||||||||||||| | |||||||||||| ||||||||||||||    
T  19895740 aaaaattggccttgg-gaccaaaactgctatagttgcaaaactta 19895697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 69
Target Start/End: Original strand, 24472635 - 24472679
Alignment:
Q  25 aaaattggccttggaggccaaaactgctacagttgcaaaacttag 69  Q
    ||||||||| |||| |||||||||||| |||| ||||||||||||    
T  24472635 aaaattggcattggcggccaaaactgccacagatgcaaaacttag 24472679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 69
Target Start/End: Complemental strand, 27489558 - 27489514
Alignment:
Q  25 aaaattggccttggaggccaaaactgctacagttgcaaaacttag 69  Q
    ||||||| ||||||||||||||||||| |||| ||||||| ||||    
T  27489558 aaaattgcccttggaggccaaaactgccacagatgcaaaagttag 27489514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 69
Target Start/End: Original strand, 32013248 - 32013292
Alignment:
Q  25 aaaattggccttggaggccaaaactgctacagttgcaaaacttag 69  Q
    ||||||| |||||  |||||||||||||||| |||||||||||||    
T  32013248 aaaattgaccttgagggccaaaactgctacatttgcaaaacttag 32013292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 34679145 - 34679097
Alignment:
Q  97 caaaatcgaaacttcgtaaaagttagggggagaaaactgctattaagcc 145  Q
    |||||||| ||||| | |||||||||||||  |||||||||||||||||    
T  34679145 caaaatcgcaactttggaaaagttagggggctaaaactgctattaagcc 34679097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 80
Target Start/End: Original strand, 34761063 - 34761103
Alignment:
Q  40 ggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||||||||||| |||||||||||||  |||||||||    
T  34761063 ggccaaaactgctacaattgcaaaacttaggtggcggtttt 34761103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 142
Target Start/End: Original strand, 34761127 - 34761171
Alignment:
Q  98 aaaatcgaaacttcgtaaaagttagggggagaaaactgctattaa 142  Q
    ||||||| |||||||| |||||||||||  |||||||||||||||    
T  34761127 aaaatcgcaacttcgtgaaagttaggggacgaaaactgctattaa 34761171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 80
Target Start/End: Complemental strand, 36195700 - 36195661
Alignment:
Q  40 ggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    ||||||||||||||||||||| |||||||| ||||||||||    
T  36195700 ggccaaaactgctacagttgc-aaacttagggggcggtttt 36195661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 80
Target Start/End: Original strand, 37431741 - 37431781
Alignment:
Q  40 ggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||| ||||||||||||||||||||  ||||||||||    
T  37431741 ggccaaaaatgctacagttgcaaaacttaaggggcggtttt 37431781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 69
Target Start/End: Complemental strand, 43028919 - 43028875
Alignment:
Q  25 aaaattggccttggaggccaaaactgctacagttgcaaaacttag 69  Q
    |||||||||| | |||||||||||||| |||| ||||||||||||    
T  43028919 aaaattggccctagaggccaaaactgccacagatgcaaaacttag 43028875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 80
Target Start/End: Complemental strand, 44297672 - 44297632
Alignment:
Q  40 ggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    ||||||||||||||||||| |||||||||| |||| |||||    
T  44297672 ggccaaaactgctacagttacaaaacttagggggcagtttt 44297632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 68
Target Start/End: Complemental strand, 44617858 - 44617814
Alignment:
Q  24 aaaaattggccttggaggccaaaactgctacagttgcaaaactta 68  Q
    |||||||| |||||| | | |||||||||||||||||||||||||    
T  44617858 aaaaattgaccttggggactaaaactgctacagttgcaaaactta 44617814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 145
Target Start/End: Complemental strand, 39642328 - 39642200
Alignment:
Q  24 aaaaattggccttggagg-ccaaaactgctacagttgcaaaacttagagggcggttttatagnnnnnnna------ggggcaaaatcgaaacttcgtaaa 116  Q
    ||||||||||||||| || |||||||||||||| ||||| ||||||| |||||||||| |||       |      ||| |||||||| |||||||| ||    
T  39642328 aaaaattggccttggggggccaaaactgctacaattgcagaacttagggggcggttttgtagtttttttatttagagggccaaaatcgcaacttcgtgaa 39642229  T
Q  117 agttagggggagaaaactgctattaagcc 145  Q
    |||||||||| ||||||||||||||||||    
T  39642228 agttagggggcgaaaactgctattaagcc 39642200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 15659107 - 15659053
Alignment:
Q  24 aaaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggtt 78  Q
    |||||||||| |||| ||||||||||||| |||||||||||||||| ||||||||    
T  15659107 aaaaattggctttgggggccaaaactgctccagttgcaaaacttagggggcggtt 15659053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 97 - 143
Target Start/End: Original strand, 18632605 - 18632651
Alignment:
Q  97 caaaatcgaaacttcgtaaaagttagggggagaaaactgctattaag 143  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||    
T  18632605 caaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaag 18632651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 42 - 145
Target Start/End: Original strand, 23220767 - 23220875
Alignment:
Q  42 ccaaaactgctacagttgcaaaacttagagggcggttttatagnnnnnnn---agggg--caaaatcgaaacttcgtaaaagttagggggagaaaactgc 136  Q
    |||||||||||||||||| ||||||||| |||||||||| |||          |||||  |||||||| ||||||||||||||||||||| |||||||||    
T  23220767 ccaaaactgctacagttgtaaaacttagggggcggttttgtagtttttttcagaggggaccaaaatcgtaacttcgtaaaagttagggggcgaaaactgc 23220866  T
Q  137 tattaagcc 145  Q
    ||| |||||    
T  23220867 tatcaagcc 23220875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 3377698 - 3377755
Alignment:
Q  24 aaaaattggccttggagg-ccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||| || |||||||    
T  3377698 aaaaattggccttggagggccaaaactgctaaagttgcaaaacttaggggacggtttt 3377755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 3377627 - 3377572
Alignment:
Q  25 aaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||||||||| |||||||||||| |||  |||||||||||| ||||||||||    
T  3377627 aaaattggccttgggggccaaaactgccacaaatgcaaaacttagggggcggtttt 3377572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 14978989 - 14979044
Alignment:
Q  25 aaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||||||||| | |||||||| |||||||||||||| |||| ||||||||||    
T  14978989 aaaattggccttggggtccaaaactactacagttgcaaaatttagggggcggtttt 14979044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 79
Target Start/End: Original strand, 50226594 - 50226633
Alignment:
Q  40 ggccaaaactgctacagttgcaaaacttagagggcggttt 79  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  50226594 ggccaaaactgctacaggtgcaaaacttagagggcggttt 50226633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 74
Target Start/End: Original strand, 14190730 - 14190779
Alignment:
Q  25 aaaattggccttggaggccaaaactgctacagttgcaaaacttagagggc 74  Q
    ||||||||| ||||||||||||||||| |||| |||||||||| ||||||    
T  14190730 aaaattggcattggaggccaaaactgccacagatgcaaaacttcgagggc 14190779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 69
Target Start/End: Complemental strand, 32295079 - 32295034
Alignment:
Q  24 aaaaattggccttggaggccaaaactgctacagttgcaaaacttag 69  Q
    ||||||||||||||  |||||||||||||||| |||||||||||||    
T  32295079 aaaaattggccttgtgggccaaaactgctacaattgcaaaacttag 32295034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 76
Target Start/End: Original strand, 48319608 - 48319645
Alignment:
Q  39 aggccaaaactgctacagttgcaaaacttagagggcgg 76  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  48319608 aggccaaaactgctacagttgcaaaacttagggggcgg 48319645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 16545747 - 16545803
Alignment:
Q  24 aaaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||| ||||||| | |||||||||||||||||||||| |||| || |||||||    
T  16545747 aaaaattgtccttggatgtcaaaactgctacagttgcaaaatttaggggacggtttt 16545803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 80
Target Start/End: Complemental strand, 23891770 - 23891730
Alignment:
Q  40 ggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||||||||||||||||||||||||  ||||||||||    
T  23891770 ggccaaaactgctacagttgcaaaacttaaggggcggtttt 23891730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 80
Target Start/End: Complemental strand, 25085509 - 25085469
Alignment:
Q  40 ggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||| ||||||||||| ||||||||||||||||||||    
T  25085509 ggccaaaattgctacagttgtaaaacttagagggcggtttt 25085469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 69
Target Start/End: Original strand, 41997829 - 41997873
Alignment:
Q  25 aaaattggccttggaggccaaaactgctacagttgcaaaacttag 69  Q
    ||||||||||||||||||||||||||| |||| |||||| |||||    
T  41997829 aaaattggccttggaggccaaaactgccacagatgcaaagcttag 41997873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 68
Target Start/End: Original strand, 45739123 - 45739167
Alignment:
Q  25 aaaattggccttggagg-ccaaaactgctacagttgcaaaactta 68  Q
    |||||||||||||| || |||||||||||||||||||||||||||    
T  45739123 aaaattggccttggggggccaaaactgctacagttgcaaaactta 45739167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 49426122 - 49426074
Alignment:
Q  24 aaaaattggccttggaggccaaaactgctacagttgcaaaacttagagg 72  Q
    ||||||||||||||  || ||||||||||||| ||||||||||||||||    
T  49426122 aaaaattggccttgagggtcaaaactgctacaattgcaaaacttagagg 49426074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 50401559 - 50401615
Alignment:
Q  24 aaaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||| |||||| |  | |||||||||||||||||||||||||||| |||||||    
T  50401559 aaaaattgaccttggggagccaaactgctacagttgcaaaacttagaggacggtttt 50401615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 1096634 - 1096692
Alignment:
Q  24 aaaaattggcctt--ggaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||||||||  || |||||||||||||||||||||||| ||||| || |||||||    
T  1096634 aaaaattggccttcggggggccaaaactgctacagttgcaaagcttaggggacggtttt 1096692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 16874691 - 16874746
Alignment:
Q  25 aaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    ||||||||||||||  ||||||||||| |||| |||||||||||  ||||||||||    
T  16874691 aaaattggccttgggagccaaaactgccacagatgcaaaacttatggggcggtttt 16874746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 25486479 - 25486526
Alignment:
Q  98 aaaatcgaaacttcgtaaaagttagggggagaaaactgctattaagcc 145  Q
    ||||||| |||||||| ||||||||||||  |||||||||||||||||    
T  25486479 aaaatcgcaacttcgtgaaagttagggggcaaaaactgctattaagcc 25486526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 39642396 - 39642451
Alignment:
Q  25 aaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    ||||||||| |||| |||||||||||| |||  |||||||||||| ||||||||||    
T  39642396 aaaattggctttgggggccaaaactgccacaaatgcaaaacttagggggcggtttt 39642451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 73
Target Start/End: Complemental strand, 14190663 - 14190625
Alignment:
Q  35 ttggaggccaaaactgctacagttgcaaaacttagaggg 73  Q
    |||| ||||||||||||||||| ||||||||||||||||    
T  14190663 ttgggggccaaaactgctacagatgcaaaacttagaggg 14190625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 142
Target Start/End: Complemental strand, 16874553 - 16874511
Alignment:
Q  100 aatcgaaacttcgtaaaagttagggggagaaaactgctattaa 142  Q
    ||||| ||||||||||||||||||||| ||||| |||||||||    
T  16874553 aatcgcaacttcgtaaaagttagggggcgaaaattgctattaa 16874511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 73
Target Start/End: Complemental strand, 27864280 - 27864250
Alignment:
Q  43 caaaactgctacagttgcaaaacttagaggg 73  Q
    |||||||||||||||||||||||||||||||    
T  27864280 caaaactgctacagttgcaaaacttagaggg 27864250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 69
Target Start/End: Original strand, 6320768 - 6320813
Alignment:
Q  24 aaaaattggccttggaggccaaaactgctacagttgcaaaacttag 69  Q
    ||||||||| ||| | |||| |||||||||||||||||||||||||    
T  6320768 aaaaattggtctttggggccgaaactgctacagttgcaaaacttag 6320813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 80
Target Start/End: Complemental strand, 7060736 - 7060699
Alignment:
Q  43 caaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    ||||| || |||||||||||||||||||||||||||||    
T  7060736 caaaattgttacagttgcaaaacttagagggcggtttt 7060699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 12960973 - 12960916
Alignment:
Q  24 aaaaattggccttggagg-ccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    ||||||| ||||||| || |||||||||||| |||||||||||||||  |||||||||    
T  12960973 aaaaattagccttggggggccaaaactgctatagttgcaaaacttaggaggcggtttt 12960916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 142
Target Start/End: Complemental strand, 46880786 - 46880741
Alignment:
Q  97 caaaatcgaaacttcgtaaaagttagggggagaaaactgctattaa 142  Q
    |||||||| |||||||||||| |||||| | |||||||||||||||    
T  46880786 caaaatcgcaacttcgtaaaaattagggagcgaaaactgctattaa 46880741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 80
Target Start/End: Complemental strand, 1096578 - 1096538
Alignment:
Q  40 ggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||||||| |||| ||| |||||||||||||||||||    
T  1096578 ggccaaaactgccacagatgcgaaacttagagggcggtttt 1096538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 3377549 - 3377501
Alignment:
Q  97 caaaatcgaaacttcgtaaaagttagggggagaaaactgctattaagcc 145  Q
    |||||||| ||||| | |||||||||||||  |||||||||||||||||    
T  3377549 caaaatcgcaactttggaaaagttagggggctaaaactgctattaagcc 3377501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 14978845 - 14978797
Alignment:
Q  97 caaaatcgaaacttcgtaaaagttagggggagaaaactgctattaagcc 145  Q
    |||||||| ||||| | |||||||||||||  |||||||||||||||||    
T  14978845 caaaatcgcaactttggaaaagttagggggctaaaactgctattaagcc 14978797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 80
Target Start/End: Original strand, 17760893 - 17760933
Alignment:
Q  40 ggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||||||||||| ||||||||||||  ||||||||||    
T  17760893 ggccaaaactgctacaattgcaaaacttaaggggcggtttt 17760933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 25085447 - 25085399
Alignment:
Q  97 caaaatcgaaacttcgtaaaagttagggggagaaaactgctattaagcc 145  Q
    |||||||| |||||  | |||||||||||| ||||||||||||||||||    
T  25085447 caaaatcgcaactttatgaaagttagggggcgaaaactgctattaagcc 25085399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 30849347 - 30849291
Alignment:
Q  24 aaaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    ||||||||  ||||| || ||||||||||| |||||||||| ||||||| |||||||    
T  30849347 aaaaattgatcttgggggtcaaaactgctatagttgcaaaatttagaggacggtttt 30849291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 68
Target Start/End: Complemental strand, 41997750 - 41997722
Alignment:
Q  40 ggccaaaactgctacagttgcaaaactta 68  Q
    |||||||||||||||||||||||||||||    
T  41997750 ggccaaaactgctacagttgcaaaactta 41997722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 80
Target Start/End: Original strand, 44436955 - 44436990
Alignment:
Q  44 aaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    ||||||||||||||||||||||||| |||||||||||    
T  44436955 aaaactgctacagttgcaaaactta-agggcggtttt 44436990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 74
Target Start/End: Original strand, 46573032 - 46573064
Alignment:
Q  42 ccaaaactgctacagttgcaaaacttagagggc 74  Q
    |||||||||||||||||||||||||||| ||||    
T  46573032 ccaaaactgctacagttgcaaaacttagggggc 46573064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 46573093 - 46573141
Alignment:
Q  97 caaaatcgaaacttcgtaaaagttagggggagaaaactgctattaagcc 145  Q
    |||||||| ||||||||||||||||| ||   |||||||||||||||||    
T  46573093 caaaatcgcaacttcgtaaaagttagaggacaaaaactgctattaagcc 46573141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 37813279 - 37813334
Alignment:
Q  25 aaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||||||||| |||||||||||| |||| |||||||||||| ||||||||||    
T  37813279 aaaattggccttgggggccaaaactgccacagatgcaaaacttagggggcggtttt 37813334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 26 - 80
Target Start/End: Complemental strand, 41487326 - 41487271
Alignment:
Q  26 aaattggccttgga-ggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||||||||  |||||||||||||||||||||||||||||| ||||||||||    
T  41487326 aaattggccttgggcggccaaaactgctacagttgcaaaacttagggggcggtttt 41487271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 41487398 - 41487453
Alignment:
Q  25 aaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||| ||||| ||||||||| |||||||||||||||||||| ||||||||||    
T  41487398 aaaattggtcttgggggccaaaacagctacagttgcaaaacttagggggcggtttt 41487453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 23702253 - 23702197
Alignment:
Q  24 aaaaattggccttggagg-ccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    ||||||||||||||| || |||||||| ||||||||||||||||||| ||||||||||    
T  23702253 aaaaattggccttgggggaccaaaactactacagttgcaaaacttag-gggcggtttt 23702197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 69
Target Start/End: Original strand, 27545543 - 27545588
Alignment:
Q  24 aaaaattggccttggaggccaaaactgctacagttgcaaaacttag 69  Q
    ||||||||||||||| |||||||||||||||| ||| |||||||||    
T  27545543 aaaaattggccttgggggccaaaactgctacaattgtaaaacttag 27545588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 30539116 - 30539059
Alignment:
Q  24 aaaaattggccttggagg-ccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    ||||||||||||||| || |||||||||||||||||| ||||||||| |||| |||||    
T  30539116 aaaaattggccttggggggccaaaactgctacagttgtaaaacttagggggcagtttt 30539059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 97 - 142
Target Start/End: Complemental strand, 37263406 - 37263361
Alignment:
Q  97 caaaatcgaaacttcgtaaaagttagggggagaaaactgctattaa 142  Q
    |||||||| |||||||||||||||| |||| |||||||||||||||    
T  37263406 caaaatcgcaacttcgtaaaagttaaggggcgaaaactgctattaa 37263361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 9762465 - 9762513
Alignment:
Q  97 caaaatcgaaacttcgtaaaagttagggggagaaaactgctattaagcc 145  Q
    |||||||| |||||||||||||||||| || ||||| ||||||||||||    
T  9762465 caaaatcgcaacttcgtaaaagttaggtggcgaaaattgctattaagcc 9762513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 17070955 - 17070907
Alignment:
Q  97 caaaatcgaaacttcgtaaaagttagggggagaaaactgctattaagcc 145  Q
    |||||||| |||||||| ||||||| |||| ||||||||||||||||||    
T  17070955 caaaatcgcaacttcgtgaaagttaaggggcgaaaactgctattaagcc 17070907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 17577317 - 17577365
Alignment:
Q  97 caaaatcgaaacttcgtaaaagttagggggagaaaactgctattaagcc 145  Q
    |||||||| |||||||| ||||||| |||| ||||||||||||||||||    
T  17577317 caaaatcgcaacttcgtgaaagttaaggggcgaaaactgctattaagcc 17577365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 68
Target Start/End: Original strand, 29657888 - 29657932
Alignment:
Q  24 aaaaattggccttggaggccaaaactgctacagttgcaaaactta 68  Q
    ||||||||||  ||||||||||||| |||||||||||||||||||    
T  29657888 aaaaattggctctggaggccaaaacggctacagttgcaaaactta 29657932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 521709 - 521756
Alignment:
Q  98 aaaatcgaaacttcgtaaaagttagggggagaaaactgctattaagcc 145  Q
    ||||||| |||||||| ||| |||||||| ||||||||||||||||||    
T  521709 aaaatcgcaacttcgtgaaaattagggggtgaaaactgctattaagcc 521756  T

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Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 21486780 - 21486725
Alignment:
Q  25 aaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||  |||||||||||||| ||| |||| |||||||||||| ||||||||||    
T  21486780 aaaattgatcttggaggccaaaaatgccacaggtgcaaaacttagggggcggtttt 21486725  T

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Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 69
Target Start/End: Original strand, 26824023 - 26824065
Alignment:
Q  26 aaattggccttggaggccaaaactgctacagttgcaaaacttag 69  Q
    ||||||||||||| |||||||||||||| |||||||||||||||    
T  26824023 aaattggccttgg-ggccaaaactgctatagttgcaaaacttag 26824065  T

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Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 68
Target Start/End: Complemental strand, 39889884 - 39889853
Alignment:
Q  37 ggaggccaaaactgctacagttgcaaaactta 68  Q
    ||||||||||||||||||||||||||||||||    
T  39889884 ggaggccaaaactgctacagttgcaaaactta 39889853  T

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Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 76
Target Start/End: Original strand, 39889961 - 39890012
Alignment:
Q  25 aaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcgg 76  Q
    ||||||| | ||||||||||||| ||| |||| |||||||||||||||||||    
T  39889961 aaaattgacattggaggccaaaattgccacagatgcaaaacttagagggcgg 39890012  T

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Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 9762384 - 9762433
Alignment:
Q  21 acaaaaaattggccttggag-gccaaaactgctacagttgcaaaacttag 69  Q
    |||||||||| ||||||| | ||||||| |||||||||||||||||||||    
T  9762384 acaaaaaattagccttggggagccaaaattgctacagttgcaaaacttag 9762433  T

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Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 14880524 - 14880578
Alignment:
Q  24 aaaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||||| ||||  ||||||||||| |||||||||||||||||  |||||||||    
T  14880524 aaaaattggcattgg--gccaaaactgcgacagttgcaaaacttaggaggcggtttt 14880578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 69
Target Start/End: Complemental strand, 17071017 - 17070988
Alignment:
Q  40 ggccaaaactgctacagttgcaaaacttag 69  Q
    ||||||||||||||||||||||||||||||    
T  17071017 ggccaaaactgctacagttgcaaaacttag 17070988  T

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Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 69
Target Start/End: Original strand, 17577255 - 17577284
Alignment:
Q  40 ggccaaaactgctacagttgcaaaacttag 69  Q
    ||||||||||||||||||||||||||||||    
T  17577255 ggccaaaactgctacagttgcaaaacttag 17577284  T

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Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 68
Target Start/End: Complemental strand, 44101417 - 44101372
Alignment:
Q  24 aaaaattggccttgg-aggccaaaactgctacagttgcaaaactta 68  Q
    ||||||||| ||||| ||||||||||||||| ||||||||||||||    
T  44101417 aaaaattggtcttgggaggccaaaactgctaaagttgcaaaactta 44101372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 68
Target Start/End: Original strand, 45177394 - 45177439
Alignment:
Q  24 aaaaattggccttgg-aggccaaaactgctacagttgcaaaactta 68  Q
    |||||||||| |||| ||||||||||| ||||||||||||||||||    
T  45177394 aaaaattggctttgggaggccaaaactactacagttgcaaaactta 45177439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 142
Target Start/End: Complemental strand, 45457014 - 45456969
Alignment:
Q  97 caaaatcgaaacttcgtaaaagttagggggagaaaactgctattaa 142  Q
    |||||||  ||||||||||||||||||||| |||||||| ||||||    
T  45457014 caaaatcacaacttcgtaaaagttagggggcgaaaactgttattaa 45456969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 6807279 - 6807243
Alignment:
Q  43 caaaactgctacagttgcaaaacttagagggcggttt 79  Q
    ||||||||||||||||||||||||||| ||| |||||    
T  6807279 caaaactgctacagttgcaaaacttagggggtggttt 6807243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 16982674 - 16982626
Alignment:
Q  97 caaaatcgaaacttcgtaaaagttagggggagaaaactgctattaagcc 145  Q
    |||||| | |||||||| |||||||||||| |||||||||||| |||||    
T  16982674 caaaattgcaacttcgtgaaagttagggggtgaaaactgctatcaagcc 16982626  T

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Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 20228279 - 20228231
Alignment:
Q  97 caaaatcgaaacttcgtaaaagttagggggagaaaactgctattaagcc 145  Q
    |||||||| |||||||||||||||||| |  |||||||| |||||||||    
T  20228279 caaaatcgcaacttcgtaaaagttaggagacgaaaactgttattaagcc 20228231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 69
Target Start/End: Original strand, 22192486 - 22192530
Alignment:
Q  25 aaaattggccttggaggccaaaactgctacagttgcaaaacttag 69  Q
    ||||||| ||||||  |||||||| ||||||||||||||||||||    
T  22192486 aaaattgaccttggcagccaaaacggctacagttgcaaaacttag 22192530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 23702171 - 23702123
Alignment:
Q  97 caaaatcgaaacttcgtaaaagttagggggagaaaactgctattaagcc 145  Q
    |||||||| ||||| || ||||||| |||| ||||||||||||||||||    
T  23702171 caaaatcgtaactttgtgaaagttaaggggcgaaaactgctattaagcc 23702123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 69
Target Start/End: Complemental strand, 25144068 - 25144024
Alignment:
Q  25 aaaattggccttggaggccaaaactgctacagttgcaaaacttag 69  Q
    ||||||||| ||||| ||||||||||| |||| ||||||||||||    
T  25144068 aaaattggctttggatgccaaaactgccacagatgcaaaacttag 25144024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 37813210 - 37813162
Alignment:
Q  97 caaaatcgaaacttcgtaaaagttagggggagaaaactgctattaagcc 145  Q
    |||||||| || || || |||||||||||| ||||||||||||||||||    
T  37813210 caaaatcgtaaatttgtgaaagttagggggcgaaaactgctattaagcc 37813162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 41487248 - 41487200
Alignment:
Q  97 caaaatcgaaacttcgtaaaagttagggggagaaaactgctattaagcc 145  Q
    |||||||| |||||||| ||| || ||||| ||||||||||||||||||    
T  41487248 caaaatcgcaacttcgtgaaaattcgggggcgaaaactgctattaagcc 41487200  T

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Target: scaffold0062 (Bit Score: 37; Significance: 0.000000000005; HSPs: 3)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 40 - 80
Target Start/End: Complemental strand, 46187 - 46147
Alignment:
Q  40 ggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  46187 ggccaaaactgctacagttgcaaaacttagggggcggtttt 46147  T

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Target: scaffold0062; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 145
Target Start/End: Complemental strand, 46123 - 46076
Alignment:
Q  98 aaaatcgaaacttcgtaaaagttagggggagaaaactgctattaagcc 145  Q
    ||||||| |||||||| |||||||||||| |||||||||||| |||||    
T  46123 aaaatcgcaacttcgtgaaagttagggggcgaaaactgctataaagcc 46076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 46263 - 46318
Alignment:
Q  25 aaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    ||||||| |||||| |||||||||||  |||| ||||||||||||||||| |||||    
T  46263 aaaattgaccttgggggccaaaactgtcacagatgcaaaacttagagggcagtttt 46318  T

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Target: scaffold0067 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 80
Target Start/End: Original strand, 4220 - 4257
Alignment:
Q  43 caaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  4220 caaaactgctacagttgcaaaacttagggggcggtttt 4257  T

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Target: scaffold0025 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 19217 - 19272
Alignment:
Q  25 aaaattggccttggaggccaaaactgctacagttgcaaaacttagagggcggtttt 80  Q
    |||||||||||||| |||||||||| | |||  |||||||||||| ||||||||||    
T  19217 aaaattggccttgggggccaaaactaccacatgtgcaaaacttagggggcggtttt 19272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 69
Target Start/End: Original strand, 77047 - 77093
Alignment:
Q  24 aaaaattggccttggagg-ccaaaactgctacagttgcaaaacttag 69  Q
    ||||||||||| |||||| |||||||||||||||||| |||||||||    
T  77047 aaaaattggccgtggagggccaaaactgctacagttgtaaaacttag 77093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 142
Target Start/End: Original strand, 9603 - 9648
Alignment:
Q  97 caaaatcgaaacttcgtaaaagttagggggagaaaactgctattaa 142  Q
    |||||||| |||||||| ||||||||| || |||||||||||||||    
T  9603 caaaatcgcaacttcgtgaaagttaggaggtgaaaactgctattaa 9648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 138
Target Start/End: Complemental strand, 24941 - 24900
Alignment:
Q  97 caaaatcgaaacttcgtaaaagttagggggagaaaactgcta 138  Q
    |||||||| ||||||||||||||||||||  |||||||||||    
T  24941 caaaatcgtaacttcgtaaaagttaggggacgaaaactgcta 24900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 68
Target Start/End: Complemental strand, 9677 - 9633
Alignment:
Q  24 aaaaattggccttggaggccaaaactgctacagttgcaaaactta 68  Q
    ||||||||  ||||| |||||||||| ||||||||||||||||||    
T  9677 aaaaattgatcttgggggccaaaactactacagttgcaaaactta 9633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 69
Target Start/End: Complemental strand, 20039 - 19995
Alignment:
Q  25 aaaattggccttggaggccaaaactgctacagttgcaaaacttag 69  Q
    ||||||||| |||| |||||||||||| |||| ||||||||||||    
T  20039 aaaattggctttgggggccaaaactgccacagatgcaaaacttag 19995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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