View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19349_high_17 (Length: 305)
Name: NF19349_high_17
Description: NF19349
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19349_high_17 |
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Alignment Details
Target: chr3 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 19 - 297
Target Start/End: Original strand, 34206849 - 34207114
Alignment:
| Q |
19 |
actatgctataacattcgctatatgacaatactgagaaaggaatgaagaatataaaatacatgtacacctcctagagttaacctagcacaatttcccatg |
118 |
Q |
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|||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
34206849 |
actatgctataacattcgctgtatgacaatactgagcaaggaatgaagaatataaaatacatgtacacctcctagagttaaccttgcacaatttcccatg |
34206948 |
T |
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| Q |
119 |
gaaaatcccatgggcaggggaatttgcattttaataactatatgcaatcgacgcacaagccatagtcaaggcattcataaaatacaatattaaatctaaa |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
34206949 |
gaaaatcccatgggcaggggaatttgcattttaataactatatgcaatcgacgcacaagccatagtcaaggcat-------------tattaaatctaaa |
34207035 |
T |
|
| Q |
219 |
gttttcaacagaatataacaccataattttgaaaataccttgcattctgtctggcttgatctttcctccaattcatctc |
297 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34207036 |
gttttcaacagaatataacaccataattttgaaaataccttgcattctgtctggcttgatctttcctccaattcatctc |
34207114 |
T |
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