View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19349_low_13 (Length: 338)

Name: NF19349_low_13
Description: NF19349
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19349_low_13
NF19349_low_13
[»] chr7 (3 HSPs)
chr7 (14-324)||(46467611-46467922)
chr7 (14-230)||(15890361-15890576)
chr7 (24-250)||(8827056-8827282)
[»] scaffold0004 (2 HSPs)
scaffold0004 (7-250)||(353764-354012)
scaffold0004 (7-250)||(113044-113291)
[»] chr4 (3 HSPs)
chr4 (7-250)||(37439661-37439909)
chr4 (44-229)||(54001424-54001610)
chr4 (97-148)||(39072738-39072789)
[»] chr3 (4 HSPs)
chr3 (7-250)||(3274096-3274344)
chr3 (7-250)||(3277506-3277754)
chr3 (7-250)||(39925466-39925712)
chr3 (9-250)||(5026999-5027243)
[»] chr1 (4 HSPs)
chr1 (7-250)||(16851257-16851505)
chr1 (30-214)||(17364824-17365008)
chr1 (7-250)||(21198291-21198540)
chr1 (7-250)||(52986892-52987141)
[»] chr5 (3 HSPs)
chr5 (7-250)||(14404623-14404869)
chr5 (7-250)||(40665983-40666230)
chr5 (41-228)||(25685758-25685948)
[»] chr8 (3 HSPs)
chr8 (7-250)||(39038390-39038638)
chr8 (91-143)||(186513-186565)
chr8 (173-250)||(186377-186458)
[»] scaffold0303 (1 HSPs)
scaffold0303 (7-250)||(21060-21306)
[»] scaffold0097 (1 HSPs)
scaffold0097 (29-250)||(30832-31058)
[»] chr2 (3 HSPs)
chr2 (29-250)||(20727003-20727229)
chr2 (7-220)||(24780043-24780260)
chr2 (21-230)||(11023360-11023572)
[»] chr6 (4 HSPs)
chr6 (9-250)||(18677416-18677663)
chr6 (29-250)||(12352401-12352623)
chr6 (37-249)||(14859074-14859282)
chr6 (96-250)||(24170367-24170526)
[»] scaffold0882 (1 HSPs)
scaffold0882 (7-250)||(221-468)
[»] scaffold0766 (1 HSPs)
scaffold0766 (7-250)||(2935-3182)
[»] scaffold0031 (1 HSPs)
scaffold0031 (7-250)||(89161-89406)
[»] scaffold0047 (1 HSPs)
scaffold0047 (29-250)||(9070-9295)
[»] scaffold1744 (1 HSPs)
scaffold1744 (91-250)||(268-432)


Alignment Details
Target: chr7 (Bit Score: 230; Significance: 1e-127; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 14 - 324
Target Start/End: Original strand, 46467611 - 46467922
Alignment:
Q  14 tactagatagttgagttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaatttcttttgtattgggtgcgat 113  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  46467611 tactacatagttgagttgtagtacttatgcttcaatttgttatatctacacatttgatgtattattttattgttgtaatttcttttgtattgggtgcgat 46467710  T
Q  114 cccaaggtttaaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcgttatttgtaaaggttactagc 213  Q
    | |||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||| |||||||||||||     
T  46467711 ctcaaggttttaagagaggtgatatctcttagttttagagactatcctacaaagcattgttttgtttggagagtgctcattatttataaaggttactagt 46467810  T
Q  214 ttatcctgtttaaaag--cggttagtgaaaatctcaaggatagttcccccttatgttaccattaaatttgaagtatgtgctcttaacattatattgtttg 311  Q
    ||||||||||||||||   ||||||||||||||| |||||||| | |||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  46467811 ttatcctgtttaaaagtttggttagtgaaaatcttaaggatagct-ccccttgtgttaccattaaattttaagtatgtgctcttaacattatattgtttg 46467909  T
Q  312 atatattcccgac 324  Q
    ||||||| |||||    
T  46467910 atatattgccgac 46467922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 14 - 230
Target Start/End: Original strand, 15890361 - 15890576
Alignment:
Q  14 tactagatagttgagttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaatttct-tttgtattgggtgcga 112  Q
    ||||| |||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  | ||||||||||||||||    
T  15890361 tactacatagttgagttgtag--cttgtgcttcaatttgttatatctacccatttggtgtattattttattgttgtaattcttatttgtattgggtgcga 15890458  T
Q  113 tcccaaggtttaaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcgttatttgtaaaggttactag 212  Q
    ||||||||||| ||||||||||||||||||| |||||||||||| |  |||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  15890459 tcccaaggtttcaagagaggtgatatctcttggttttagagactcttttacaaaggactgttttgtttggagagtgctcgttatttgtaaaggttactag 15890558  T
Q  213 cttatcctgtttaaaagc 230  Q
    ||||||||  ||||||||    
T  15890559 cttatcctaattaaaagc 15890576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 24 - 250
Target Start/End: Original strand, 8827056 - 8827282
Alignment:
Q  24 ttgagttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaatttcttttgtattgggtgcgatcccaaggttt 123  Q
    ||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||| ||||  ||||||| | |||| ||||||| ||||| |||    
T  8827056 ttgagttgtagta-ttattcttcaatttgttatatctacacatttggtgtattattttattattgttttttcttt-gcattgtgtgcgattccaagattt 8827153  T
Q  124 aaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcgttatttgtaaaggttactagcttatcctgtt 223  Q
     ||||||||||||||||||| | |||| || || | |||||||||||  ||||||||||||| |||||||  ||||||||| |||||||||| |||| ||    
T  8827154 caagagaggtgatatctcttgggtttataggctcttctacaaaagatatttttgtttggagaatgctcgtattttgtaaagtttactagcttctcctatt 8827253  T
Q  224 taaaagc--ggttagtgaaaatctcaagg 250  Q
    |||||||  || |||||||||||||||||    
T  8827254 taaaagcttggctagtgaaaatctcaagg 8827282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 154; Significance: 1e-81; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 7 - 250
Target Start/End: Complemental strand, 354012 - 353764
Alignment:
Q  7 tattttatactagatagttgag-ttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaatt-tcttttgtatt 104  Q
    |||||||||||| |||||| |  ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| | |||||||||    
T  354012 tattttatactacatagtttatcttgtagttcttgtgcttcaatttgttatatctacacatttggtgtattactttattattgtaattctattttgtatt 353913  T
Q  105 gggtgcgatcccaaggtttaaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcgttat-ttgtaaa 203  Q
    ||||||||||||||||||| ||||||||||||||||||| | ||||||| || | ||||||| ||||||||||||||||||||||||| ||| |||||||    
T  353912 gggtgcgatcccaaggtttcaagagaggtgatatctcttgggtttagaggctcttctacaaaggattgttttgtttggagagtgctcgctatcttgtaaa 353813  T
Q  204 ggttactagcttatcctgtttaaaagc--ggttagtgaaaatctcaagg 250  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||    
T  353812 ggttactagcttatcctgtttaaaagctaggttagtgaaaatctcaagg 353764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 7 - 250
Target Start/End: Complemental strand, 113291 - 113044
Alignment:
Q  7 tattttatactagatagttgagttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaa-tttcttttgtattg 105  Q
    |||||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||| |||||| | | ||||||||||    
T  113291 tattttatactacatagttgagttgtagtaattgtgcgtcaatttgttatatctacacatttggtgtattactttattattgtaactctattttgtattg 113192  T
Q  106 ggtgcgatcccaaggtttaaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcg-ttatttgtaaag 204  Q
    |||| |||||||| |||| ||||||||||||||||||| | || ||||||| | ||||||| |||||||||||||| |||||||||| |||||| |||||    
T  113191 ggtgtgatcccaaagtttcaagagaggtgatatctcttgggttaagagactcttctacaaaggattgttttgtttgaagagtgctcgcttatttataaag 113092  T
Q  205 gttactagcttatcctgtttaaaagc--ggttagtgaaaatctcaagg 250  Q
    ||||||||||||||| ||||||||||  ||||||||||||||||||||    
T  113091 gttactagcttatcccgtttaaaagctaggttagtgaaaatctcaagg 113044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 143; Significance: 4e-75; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 7 - 250
Target Start/End: Original strand, 37439661 - 37439909
Alignment:
Q  7 tattttatactagatagttgagttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaa--tttcttttgtatt 104  Q
    |||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||  |||||| ||||||   || |||||||||    
T  37439661 tattttatactacatagttgagttgtagtagttgtgcttgaatttgttatatctacacatttggtgtattgctttattattgtaactcttattttgtatt 37439760  T
Q  105 gggtgcgatcccaaggtttaaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcg-ttatttgtaaa 203  Q
    | ||||||||||||  ||| ||||||||||||||||||| | |||||||||| | ||||||| |||| ||||||||| |||||||||| |||||||||||    
T  37439761 gtgtgcgatcccaaattttcaagagaggtgatatctcttgggtttagagactcttctacaaaggattattttgtttgaagagtgctcgcttatttgtaaa 37439860  T
Q  204 ggttactagcttatcctgtttaaaagc--ggttagtgaaaatctcaagg 250  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||    
T  37439861 ggttactagcttatcctgtttaaaagctaggttagtgaaaatctcaagg 37439909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 44 - 229
Target Start/End: Complemental strand, 54001610 - 54001424
Alignment:
Q  44 ttcaatttgttatatctacacatttggtgtattatttta--ttgttgtaatttcttttgtattgggtgcgatcccaaggtttaaagagaggtgatatctc 141  Q
    |||||||||||||||||||| |||||||||| |  ||||  ||||| || ||| ||| ||||||||||||||| |||||||  | |||| ||||||||||    
T  54001610 ttcaatttgttatatctacatatttggtgtaatcatttaaattgttata-tttatttggtattgggtgcgatctcaaggttccatgagatgtgatatctc 54001512  T
Q  142 ttagttttagagactatcctacaaaagattgttttgtttggagagtgctcgttatttgtaaaggttactagcttatcctgtttaaaag 229  Q
    || |||||||| | | | ||||||| |||||||||||||||||| ||||||||||||| |||||||| ||||||||||| ||||||||    
T  54001511 ttggttttagaaagtcttctacaaatgattgttttgtttggagaatgctcgttatttggaaaggttattagcttatcctatttaaaag 54001424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 97 - 148
Target Start/End: Complemental strand, 39072789 - 39072738
Alignment:
Q  97 tttgtattgggtgcgatcccaaggtttaaagagaggtgatatctcttagttt 148  Q
    |||||||||| ||||||||||| |||| || |||||||||||||||| ||||    
T  39072789 tttgtattggatgcgatcccaaagtttcaaaagaggtgatatctcttggttt 39072738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 142; Significance: 2e-74; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 7 - 250
Target Start/End: Original strand, 3274096 - 3274344
Alignment:
Q  7 tattttatactagatagttgag-ttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaatttct-tttgtatt 104  Q
    |||||||||||| |||||| |  ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||  | ||||||||    
T  3274096 tattttatactacatagtttatcttgtagttcttgtgcttcaatttgttatatctacacatttggtgtattactttattattgtaattcttatttgtatt 3274195  T
Q  105 gggtgcgatcccaaggtttaaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcgttat-ttgtaaa 203  Q
    ||||| ||||||||||||| ||||||||||||||||||| | ||||||| || | ||||||| ||||||||||||||||||||||||| ||| |||||||    
T  3274196 gggtgtgatcccaaggtttcaagagaggtgatatctcttgggtttagaggctcttctacaaaggattgttttgtttggagagtgctcgctatcttgtaaa 3274295  T
Q  204 ggttactagcttatcctgtttaaaagc--ggttagtgaaaatctcaagg 250  Q
    |||||||||||||||| ||||||||||  ||||||||||||||||||||    
T  3274296 ggttactagcttatcccgtttaaaagctaggttagtgaaaatctcaagg 3274344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 7 - 250
Target Start/End: Original strand, 3277506 - 3277754
Alignment:
Q  7 tattttatactagatagttgag-ttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaatttct-tttgtatt 104  Q
    |||||||||||| |||||| |  ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||  | ||||||||    
T  3277506 tattttatactacatagtttatcttgtagttcttgtgcttcaatttgttatatctacacatttggtgtattactttattattgtaattcttatttgtatt 3277605  T
Q  105 gggtgcgatcccaaggtttaaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcgttat-ttgtaaa 203  Q
    ||||| ||||||||||||| ||||||||||||||||||| | ||||||| || | ||||||| ||||||||||||||||||||||||| ||| |||||||    
T  3277606 gggtgtgatcccaaggtttcaagagaggtgatatctcttgggtttagaggctcttctacaaaggattgttttgtttggagagtgctcgctatcttgtaaa 3277705  T
Q  204 ggttactagcttatcctgtttaaaagc--ggttagtgaaaatctcaagg 250  Q
    |||||||||||||||| ||||||||||  ||||||||||||||||||||    
T  3277706 ggttactagcttatcccgtttaaaagctaggttagtgaaaatctcaagg 3277754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 7 - 250
Target Start/End: Original strand, 39925466 - 39925712
Alignment:
Q  7 tattttatactagatagttgag-ttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaatttcttttgtattg 105  Q
    |||||||||||| |||||| |  ||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||| |||||| |  ||||||||||    
T  39925466 tattttatactacatagtttatcttgtagttcttgtacttcaatttgttatatctacacatttggtgtattactttattattgtaacta-ttttgtattg 39925564  T
Q  106 ggtgcgatcccaaggtttaaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcgttat-ttgtaaag 204  Q
    |||||||||||||||||| ||||||||||||||||||| | ||||||| || | ||||||| ||||||||||||||||||||||||| ||| ||||||||    
T  39925565 ggtgcgatcccaaggtttcaagagaggtgatatctcttgggtttagaggctcttctacaaaggattgttttgtttggagagtgctcgctatcttgtaaag 39925664  T
Q  205 gttactagcttatcctgtttaaaagc--ggttagtgaaaatctcaagg 250  Q
    ||||||||||||||| ||||||||||  ||||||||||||||||||||    
T  39925665 gttactagcttatcccgtttaaaagctaggttagtgaaaatctcaagg 39925712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 9 - 250
Target Start/End: Complemental strand, 5027243 - 5026999
Alignment:
Q  9 ttttatactagatagttgag-ttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaatttcttttgtattggg 107  Q
    |||||||||| |||||| |  ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| || ||| |  |||| |||||||    
T  5027243 ttttatactacatagtttatcttgtagttcttgtacttcaatttgttatatctacacatttggtgtattattttattattataacta-ttttatattggg 5027145  T
Q  108 tgcgatcccaaggtttaaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcgttat-ttgtaaaggt 206  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||| || | ||||||| ||||||||||||||||||||||| | ||| |||||||| |    
T  5027144 tgcgatcccaaggtttcaagagaggtgatatctcttaggtttagaggctcttctacaaaggattgttttgtttggagagtgcttgctatcttgtaaagat 5027045  T
Q  207 tactagcttatcctgtttaaaagc--ggttagtgaaaatctcaagg 250  Q
    ||||||||||||| ||||||||||  ||||||||||||||||||||    
T  5027044 tactagcttatcccgtttaaaagctaggttagtgaaaatctcaagg 5026999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 142; Significance: 2e-74; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 7 - 250
Target Start/End: Original strand, 16851257 - 16851505
Alignment:
Q  7 tattttatactagatagttgag-ttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaatttct-tttgtatt 104  Q
    |||||||||||| |||||| |  ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||  | ||||||||    
T  16851257 tattttatactacatagtttatcttgtagttcttgtgcttcaatttgttatatctacacatttggtgtattactttattattgtaattcttatttgtatt 16851356  T
Q  105 gggtgcgatcccaaggtttaaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcgttat-ttgtaaa 203  Q
    ||||| ||||||||||||| ||||||||||||||||||| | ||||||| || | ||||||| ||||||||||||||||||||||||| ||| |||||||    
T  16851357 gggtgtgatcccaaggtttcaagagaggtgatatctcttgggtttagaggctcttctacaaaggattgttttgtttggagagtgctcgctatcttgtaaa 16851456  T
Q  204 ggttactagcttatcctgtttaaaagc--ggttagtgaaaatctcaagg 250  Q
    |||||||||||||||| ||||||||||  ||||||||||||||||||||    
T  16851457 ggttactagcttatcccgtttaaaagctaggttagtgaaaatctcaagg 16851505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 30 - 214
Target Start/End: Original strand, 17364824 - 17365008
Alignment:
Q  30 tgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaatttcttttgtattgggtgcgatcccaaggtttaaagag 129  Q
    |||||| ||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||||| || | | ||||||||||||||||     
T  17364824 tgtagttcttgtgcttcaatatgttatatctacacatttgctgtatcattttattgttgtaatttcttttgtatttggggtggtcccaaggtttaaagaa 17364923  T
Q  130 aggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcgttatttgtaaaggttactagct 214  Q
    |||||||||||||||| |||||||||| | ||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  17364924 aggtgatatctcttaggtttagagactcttctacaaatgattgttttgtttggagagtgctcgttatttgtaaaggttactagct 17365008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 7 - 250
Target Start/End: Original strand, 21198291 - 21198540
Alignment:
Q  7 tattttatactagatagttgag-ttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaatt--tcttttgtat 103  Q
    |||||||||||| |||||| |  ||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||| |||||| |  | ||||||||    
T  21198291 tattttatactacatagtttatcttgtagttcttgtgcttcaatttgttatatctacatatttggtgtattactttattattgtaactcttattttgtat 21198390  T
Q  104 tgggtgcgatcccaaggtttaaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcg-ttatttgtaa 202  Q
     |||||||||||||| |||| |||||||||||||||||||   |||||||||| | ||||||| |||||||||||||| ||||||||||  |||||||||    
T  21198391 agggtgcgatcccaaagtttcaagagaggtgatatctcttgagtttagagactcttctacaaaggattgttttgtttgaagagtgctcgcatatttgtaa 21198490  T
Q  203 aggttactagcttatcctgtttaaaagc--ggttagtgaaaatctcaagg 250  Q
    ||||||||||||||||| ||||||||||  ||||||||||||||||||||    
T  21198491 aggttactagcttatcccgtttaaaagctaggttagtgaaaatctcaagg 21198540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 7 - 250
Target Start/End: Complemental strand, 52987141 - 52986892
Alignment:
Q  7 tattttatactagatagttgag-ttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaa--tttcttttgtat 103  Q
    |||||||||||| |||||| |  ||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||| ||| ||   || ||||||||    
T  52987141 tattttatactacatagtttatcttgtagttcttgtacttcaatttgttatatctacacatttggtgtattactttattattgcaactcttattttgtat 52987042  T
Q  104 tgggtgcgatcccaaggtttaaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcgtta-tttgtaa 202  Q
    |||| || ||||||| |||| |||||||||||| |||||| | ||||||| || | ||||||| | |  |||||||||||||||||||| || |||||||    
T  52987041 tgggcgcaatcccaaagtttcaagagaggtgatctctcttgggtttagaggctcttctacaaagggtaattttgtttggagagtgctcgctattttgtaa 52986942  T
Q  203 aggttactagcttatcctgtttaaaagc--ggttagtgaaaatctcaagg 250  Q
    ||||||||||||||||| ||||||||||   |||||||||||||||||||    
T  52986941 aggttactagcttatcccgtttaaaagctaagttagtgaaaatctcaagg 52986892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 141; Significance: 7e-74; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 7 - 250
Target Start/End: Complemental strand, 14404869 - 14404623
Alignment:
Q  7 tattttatactagatagttgag-ttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaatttcttttgtattg 105  Q
    |||||||||||| |||||| |  ||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||| |||||| |  ||||||||||    
T  14404869 tattttatactacatagtttatcttgtagttcttgtacttcaatttgttatatctacacatttggtgtattactttattattgtaacta-ttttgtattg 14404771  T
Q  106 ggtgcgatcccaaggtttaaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcgttat-ttgtaaag 204  Q
    |||||||||||||||||| ||||||||||||||||||| | ||||||| || | ||||||| ||||||||||||||||||||||||| ||| ||||||||    
T  14404770 ggtgcgatcccaaggtttcaagagaggtgatatctcttgggtttagaggctcttctacaaaggattgttttgtttggagagtgctcgctatcttgtaaag 14404671  T
Q  205 gttactagcttatcctgtttaaaagc--ggttagtgaaaatctcaagg 250  Q
    ||||||||||||||| ||||||||||  ||||||||||||||||||||    
T  14404670 gttactagcttatcccgtttaaaagctaggttagtgaaaatctcaagg 14404623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 7 - 250
Target Start/End: Complemental strand, 40666230 - 40665983
Alignment:
Q  7 tattttatactagatagttgagttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaatt-tcttttgtattg 105  Q
    |||||||||||| ||||||||||||||||| |||||| ||||||| ||||||||||||||||||| || || |||||| |||||| | | ||||||||||    
T  40666230 tattttatactacatagttgagttgtagtaattgtgcgtcaatttattatatctacacatttggtatactactttattattgtaactctattttgtattg 40666131  T
Q  106 ggtgcgatcccaaggtttaaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcg-ttatttgtaaag 204  Q
    |||| ||||||||||||| |||||||||||||||||||   ||||||| || | ||||||| |||||||||||||| |||||| ||| ||||||||||||    
T  40666130 ggtgtgatcccaaggtttcaagagaggtgatatctcttgagtttagaggctcttctacaaatgattgttttgtttgaagagtgttcgcttatttgtaaag 40666031  T
Q  205 gttactagcttatcctgtttaaaag--cggttagtgaaaatctcaagg 250  Q
    |||| |||||||||| |||||||||   ||||||||||||||||||||    
T  40666030 gttattagcttatcccgtttaaaagttaggttagtgaaaatctcaagg 40665983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 41 - 228
Target Start/End: Original strand, 25685758 - 25685948
Alignment:
Q  41 tgcttcaatttgttatatctacacatttggtgtattatttta-ttgttgtaatttctt--ttgtattgggtgcgatcccaaggtttaaagagaggtgata 137  Q
    |||||||||||||| |||||||| |||||||||| | ||||| || ||||| ||||||  ||| ||| |||| ||||||||| ||| |||||||||||||    
T  25685758 tgcttcaatttgttttatctacatatttggtgtaatcttttaattattgta-tttcttatttgcatttggtgtgatcccaagatttcaagagaggtgata 25685856  T
Q  138 tctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcgttat-ttgtaaaggttactagcttatcctgtttaaaa 228  Q
    |||||| | ||||||| || | ||| ||| |||  ||| |||||||| ||||||| ||| |||||||||||||||| |||||||||||||||    
T  25685857 tctcttggatttagaggcttttctataaaggataatttcgtttggagtgtgctcgctatcttgtaaaggttactagattatcctgtttaaaa 25685948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 138; Significance: 4e-72; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 7 - 250
Target Start/End: Original strand, 39038390 - 39038638
Alignment:
Q  7 tattttatactagatagttgag-ttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaatttct-tttgtatt 104  Q
    |||||||||||| |||||| |  ||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||| ||||||||  | ||||||||    
T  39038390 tattttatactacatagtttatcttgtagttcttatgcttcaatttgttatatctacacatttggtgtattactttattattgtaattcttatttgtatt 39038489  T
Q  105 gggtgcgatcccaaggtttaaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcgttat-ttgtaaa 203  Q
    ||||| ||||||||||||| ||||||||||||||||||| | ||||||| || | ||||||| ||||||||||||||||||||||||| ||| |||||||    
T  39038490 gggtgtgatcccaaggtttcaagagaggtgatatctcttgggtttagaggctcttctacaaaggattgttttgtttggagagtgctcgctatcttgtaaa 39038589  T
Q  204 ggttactagcttatcctgtttaaaagc--ggttagtgaaaatctcaagg 250  Q
    |||||||||||||||| ||||||||||  ||||||||||||||||||||    
T  39038590 ggttactagcttatcccgtttaaaagctaggttagtgaaaatctcaagg 39038638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 186565 - 186513
Alignment:
Q  91 atttcttttgtattgggtgcgatcccaaggtttaaagagaggtgatatctctt 143  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||| ||||    
T  186565 atttcttttgtattgggtgcgatcccaaagtttcaagagaggtgatatttctt 186513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 250
Target Start/End: Complemental strand, 186458 - 186377
Alignment:
Q  173 ttttgtttggagagtgctcgttattt-gtaaaggtt-actagcttatcctgtttaaaagcg--gttagtgaaaatctcaagg 250  Q
    |||||||||||||||||| | ||||| ||||||||| ||||| |||||| || |||||||   |||||||||||||||||||    
T  186458 ttttgtttggagagtgcttgctattttgtaaaggtttactagtttatcccgtataaaagctaagttagtgaaaatctcaagg 186377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0303 (Bit Score: 137; Significance: 2e-71; HSPs: 1)
Name: scaffold0303
Description:

Target: scaffold0303; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 7 - 250
Target Start/End: Original strand, 21060 - 21306
Alignment:
Q  7 tattttatactagatagttgag-ttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaatttcttttgtattg 105  Q
    |||||||||||| |||||| |  ||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||| |||||| |  ||||||||||    
T  21060 tattttatactacatagtttatcttgtagttcttgtacttcaatttgttatatctacacatttggtgtattactttattattgtaacta-ttttgtattg 21158  T
Q  106 ggtgcgatcccaaggtttaaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcgttat-ttgtaaag 204  Q
    |||||||||||||||||| ||||||||||||||||||| | ||||||| || | ||||||| ||||||||||||||||||||||| | ||| ||||||||    
T  21159 ggtgcgatcccaaggtttcaagagaggtgatatctcttgggtttagaggctcttctacaaaggattgttttgtttggagagtgctagctatcttgtaaag 21258  T
Q  205 gttactagcttatcctgtttaaaagc--ggttagtgaaaatctcaagg 250  Q
    ||||||||||||||| ||||||||||  ||||||||||||||||||||    
T  21259 gttactagcttatcccgtttaaaagctaggttagtgaaaatctcaagg 21306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 129; Significance: 1e-66; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 29 - 250
Target Start/End: Complemental strand, 31058 - 30832
Alignment:
Q  29 ttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaatt--tcttttgtattgggtgcgatcccaaggtttaaa 126  Q
    |||||||||||||| |||||||||||||||||| | ||||||||||||| |||||| |||||| |  | ||||||||||||||||||||||| |||| ||    
T  31058 ttgtagtacttgtgtttcaatttgttatatctatatatttggtgtattactttattattgtaactcttattttgtattgggtgcgatcccaaagtttcaa 30959  T
Q  127 gagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcg-ttatttgtaaaggttactagcttatcctgttta 225  Q
    ||||||||||||||||| | |||||||||| |  |||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||    
T  30958 gagaggtgatatctcttgggtttagagactcttttacaaaggattgttttgtttgaagagtgctcgcttatttgtaaaggttactagcttatcccgttta 30859  T
Q  226 aaagc--ggttagtgaaaatctcaagg 250  Q
    |||||  ||||||||||||||||||||    
T  30858 aaagctaggttagtgaaaatctcaagg 30832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 129; Significance: 1e-66; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 29 - 250
Target Start/End: Complemental strand, 20727229 - 20727003
Alignment:
Q  29 ttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaatt--tcttttgtattgggtgcgatcccaaggtttaaa 126  Q
    |||||||||||||| |||||||||||||||||| | ||||||||||||| |||||| |||||| |  | ||||||||||||||||||||||| |||| ||    
T  20727229 ttgtagtacttgtgtttcaatttgttatatctatatatttggtgtattactttattattgtaactcttattttgtattgggtgcgatcccaaagtttcaa 20727130  T
Q  127 gagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcg-ttatttgtaaaggttactagcttatcctgttta 225  Q
    ||||||||||||||||| | |||||||||| |  |||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||    
T  20727129 gagaggtgatatctcttgggtttagagactcttttacaaaggattgttttgtttgaagagtgctcgcttatttgtaaaggttactagcttatcccgttta 20727030  T
Q  226 aaagc--ggttagtgaaaatctcaagg 250  Q
    |||||  ||||||||||||||||||||    
T  20727029 aaagctaggttagtgaaaatctcaagg 20727003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 7 - 220
Target Start/End: Original strand, 24780043 - 24780260
Alignment:
Q  7 tattttatactagatagttgag-ttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaatt--tcttttgtat 103  Q
    |||||||||||| |||||| |  |||||||  |||||||| ||||||||||||||||||||||||||||||| |||||| |||||| |  | ||||||||    
T  24780043 tattttatactacatagtttatcttgtagtttttgtgctttaatttgttatatctacacatttggtgtattactttattattgtaactcttattttgtat 24780142  T
Q  104 tgggtgcgatcccaaggtttaaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcgttat-ttgtaa 202  Q
    ||||||||||||||| || | |||||||||||||||||||   ||||||| || | ||||||| ||||||||||||||||||||| ||| ||| ||||||    
T  24780143 tgggtgcgatcccaaagtatcaagagaggtgatatctcttgagtttagaggctcttctacaaatgattgttttgtttggagagtgttcgctatcttgtaa 24780242  T
Q  203 aggttactagcttatcct 220  Q
    ||||||||||||||||||    
T  24780243 aggttactagcttatcct 24780260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 21 - 230
Target Start/End: Original strand, 11023360 - 11023572
Alignment:
Q  21 tagttgagttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaatttct-tttgtattgggtgcg--atccca 117  Q
    ||||||||||||||||||| ||||||||||||||||||||| | ||||| |||||||| |  || |||||| |  | ||||||||||||| |  ||||||    
T  11023360 tagttgagttgtagtacttatgcttcaatttgttatatctatatatttgatgtattatatccttattgtaaatcttatttgtattgggtgtgtgatccca 11023459  T
Q  118 aggtttaaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcgttatttgtaaaggttactagcttat 217  Q
    |||||| |||||| || |||| |||| |||||||||||| |  ||||||  ||||||||||||| ||||||||| ||||||||||| |||||||||||||    
T  11023460 aggtttcaagagaagttatatatcttggttttagagactcttttacaaagaattgttttgtttgaagagtgctcattatttgtaaatgttactagcttat 11023559  T
Q  218 cctgtttaaaagc 230  Q
    |||  ||||||||    
T  11023560 cctccttaaaagc 11023572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 126; Significance: 6e-65; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 9 - 250
Target Start/End: Original strand, 18677416 - 18677663
Alignment:
Q  9 ttttatactagatagttgag-ttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaatt--tcttttgtattg 105  Q
    |||||||||| |||||| |  ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||||| |  | ||||||||||    
T  18677416 ttttatactacatagtttatcttgtagttcttgtgcttcaatttgttatatctacacatttggtgtattactttattattgtaactcttattttgtattg 18677515  T
Q  106 ggtgcgatcccaaggtttaaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcg-ttatttgtaaag 204  Q
    |||| |||||||| |||| ||||||||||||||||||| | |||||||||| | ||||||| | |||||||||||| |||||||||| |||||||||||     
T  18677516 ggtgtgatcccaaagtttcaagagaggtgatatctcttgggtttagagactcttctacaaaggtttgttttgtttgaagagtgctcgtttatttgtaaat 18677615  T
Q  205 gttactagcttatcctgtttaaaagc--ggttagtgaaaatctcaagg 250  Q
     |||||||||||||| ||||||||||  ||||||||||||||||||||    
T  18677616 attactagcttatcccgtttaaaagctaggttagtgaaaatctcaagg 18677663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 29 - 250
Target Start/End: Original strand, 12352401 - 12352623
Alignment:
Q  29 ttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaa--tttcttttgtattgggtgcgatcccaaggtttaaa 126  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||||| |||||| |||| |   || |||||||||||||| |||||||| |||| ||    
T  12352401 ttgtagttcttgtgcttcaacttgttatatctacacatttggtgtattactttattattgttactcttattttgtattgggtgtgatcccaaagtttcaa 12352500  T
Q  127 gagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcg-ttatttgtaaaggttactagcttatcctgttta 225  Q
    ||||||||||||||||| | ||||||||||   || |||| |||||||||||||| |||||||||| |||||||| || ||||||||||||||| |||||    
T  12352501 gagaggtgatatctcttgggtttagagact---cttcaaaggattgttttgtttgaagagtgctcgcttatttgt-aatgttactagcttatcccgttta 12352596  T
Q  226 aaagc--ggttagtgaaaatctcaagg 250  Q
    |||||  ||||||||||||||||||||    
T  12352597 aaagctaggttagtgaaaatctcaagg 12352623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 37 - 249
Target Start/End: Original strand, 14859074 - 14859282
Alignment:
Q  37 cttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaatt--tcttttgtattgggtgcgatcccaaggtttaaagagaggtg 134  Q
    ||||||||||||||||||||||||||| ||||||||| ||  |||||| |||||| |  | |||||||||||||| |||||| | |||| ||||||||||    
T  14859074 cttgtgcttcaatttgttatatctacatatttggtgtctttctttattattgtaactcttattttgtattgggtgtgatccctaagtttcaagagaggtg 14859173  T
Q  135 atatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcg-ttatttgtaaaggttactagcttatcctgtttaaaag--cg 231  Q
    ||||||||| | ||||||||||   || |     ||||||||||||| |||||||||| ||||||| ||||||||    ||||||| |||||||||   |    
T  14859174 atatctcttgggtttagagactcatcttc-----attgttttgtttgaagagtgctcgtttatttgcaaaggtta----cttatcccgtttaaaagttag 14859264  T
Q  232 gttagtgaaaatctcaag 249  Q
    ||||||||||||||||||    
T  14859265 gttagtgaaaatctcaag 14859282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 96 - 250
Target Start/End: Original strand, 24170367 - 24170526
Alignment:
Q  96 ttttgtattgggtgcgatcccaaggtttaaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcgtta 195  Q
    ||||||||| |||||||||| ||||||| || ||||||||||| |||| | |||| ||  | | ||| ||| |||  |||||||||| ||||||| | ||    
T  24170367 ttttgtattaggtgcgatcctaaggtttcaaaagaggtgatatatcttgggtttaaaggttcttctataaaggataattttgtttggggagtgctagcta 24170466  T
Q  196 t-ttgtaaaggttac--tagcttatcctgtttaaaag--cggttagtgaaaatctcaagg 250  Q
    | |||||||||||||  ||| ||||| ||||||||||   ||||||||||||||||||||    
T  24170467 tcttgtaaaggttactatagtttatcttgtttaaaagtttggttagtgaaaatctcaagg 24170526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0882 (Bit Score: 121; Significance: 6e-62; HSPs: 1)
Name: scaffold0882
Description:

Target: scaffold0882; HSP #1
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 7 - 250
Target Start/End: Complemental strand, 468 - 221
Alignment:
Q  7 tattttatactagatagttgagttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaa-tttcttttgtattg 105  Q
    |||||||||||| ||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||| |||||| |||||| | | | ||||||||    
T  468 tattttatactacatagttgagttgtagtaattgtacgtcaatttgttatatctacacatttggtgtattactttattattgtaactctatcttgtattg 369  T
Q  106 ggtgcgatcccaaggtttaaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcg-ttatttgtaaag 204  Q
    |||| |||| |||||||| |||||| |||||||||||| | ||||||  || | ||||||| |||||||||||||| |||||||| | ||||||||||||    
T  368 ggtgtgatctcaaggtttcaagagatgtgatatctcttgggtttagaagctcttctacaaaggattgttttgtttgaagagtgcttgtttatttgtaaag 269  T
Q  205 gttactagcttatcctgtttaaaagc--ggttagtgaaaatctcaagg 250  Q
    |||||| |||||||| ||||||||||  ||||| ||||||||||||||    
T  268 gttactggcttatcccgtttaaaagctaggttaatgaaaatctcaagg 221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0766 (Bit Score: 121; Significance: 6e-62; HSPs: 1)
Name: scaffold0766
Description:

Target: scaffold0766; HSP #1
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 7 - 250
Target Start/End: Original strand, 2935 - 3182
Alignment:
Q  7 tattttatactagatagttgagttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaa-tttcttttgtattg 105  Q
    |||||||||||| ||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||| |||||| |||||| | | | ||||||||    
T  2935 tattttatactacatagttgagttgtagtaattgtacgtcaatttgttatatctacacatttggtgtattactttattattgtaactctatcttgtattg 3034  T
Q  106 ggtgcgatcccaaggtttaaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcg-ttatttgtaaag 204  Q
    |||| |||| |||||||| |||||| |||||||||||| | ||||||  || | ||||||| |||||||||||||| |||||||| | ||||||||||||    
T  3035 ggtgtgatctcaaggtttcaagagatgtgatatctcttgggtttagaagctcttctacaaaggattgttttgtttgaagagtgcttgtttatttgtaaag 3134  T
Q  205 gttactagcttatcctgtttaaaagc--ggttagtgaaaatctcaagg 250  Q
    |||||| |||||||| ||||||||||  ||||| ||||||||||||||    
T  3135 gttactggcttatcccgtttaaaagctaggttaatgaaaatctcaagg 3182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 121; Significance: 6e-62; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 7 - 250
Target Start/End: Complemental strand, 89406 - 89161
Alignment:
Q  7 tattttatactagatagttgag-ttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaatttcttttgtattg 105  Q
    |||||||||||| |||||| |  ||||||| |||||| ||||||| || ||||||||||||||||||||||| |||||| |||||| |  ||||||||||    
T  89406 tattttatactacatagtttatcttgtagttcttgtgtttcaatt-gtaatatctacacatttggtgtattactttattattgtaacta-ttttgtattg 89309  T
Q  106 ggtgcgatcccaaggtttaaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcgttat-ttgtaaag 204  Q
    ||||| |||||||||||| ||||||||||||||||||| | ||||||| || | ||||||| ||| ||||||||||||||||||||| ||| ||||||||    
T  89308 ggtgcaatcccaaggtttcaagagaggtgatatctcttgggtttagaggctcttctacaaaggatcgttttgtttggagagtgctcgctatcttgtaaag 89209  T
Q  205 gttactagcttatcctgtttaaaagc--ggttagtgaaaatctcaagg 250  Q
    ||||||||||||||| ||||||||||  ||||||||||||||||||||    
T  89208 gttactagcttatcccgtttaaaagctaggttagtgaaaatctcaagg 89161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 29 - 250
Target Start/End: Original strand, 9070 - 9295
Alignment:
Q  29 ttgtagtacttgtgcttcaatttgttatatctacacatttggtgtattattttattgttgtaatt-tcttttgtattgggtgcgatcccaaggtttaaag 127  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||| |||||| | | |||||||||||||| | ||||||||||| |||    
T  9070 ttgtagttcttgtacttcaatttgttatatctacacatttggtgtattactttattattgtaactctattttgtattgggtgtgttcccaaggttttaag 9169  T
Q  128 agaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgctcg-ttatttgtaaaggttactagcttatcctgtttaa 226  Q
    ||||| ||||||| || | ||||||| || | ||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||| | ||||    
T  9170 agaggcgatatcttttgggtttagaggctcttctacaaaggattgttttgtttgaagagtgctcgcttatttgtaaaggttactagcttatcccgattaa 9269  T
Q  227 aagc--ggttagtgaaaatctcaagg 250  Q
    ||||  ||||| ||||||||||||||    
T  9270 aagctaggttaatgaaaatctcaagg 9295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1744 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold1744
Description:

Target: scaffold1744; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 91 - 250
Target Start/End: Complemental strand, 432 - 268
Alignment:
Q  91 atttcttttgtattgggtgcgatcccaaggtttaaagagaggtgatatctcttagttttagagactatcctacaaaagattgttttgtttggagagtgct 190  Q
    ||||||||||| ||||||| |||||||| |||| |||||||||||||||||||   ||||||| || | ||||||| | |  ||||||||||||||||||    
T  432 atttcttttgtgttgggtgtgatcccaaagtttcaagagaggtgatatctcttgagtttagaggctcttctacaaagggtaattttgtttggagagtgct 333  T
Q  191 cgtta--tttgtaaaggttactagcttatcctgtttaaaa-gcg--gttagtgaaaatctcaagg 250  Q
    || ||  |||||||||||||||||||||||| |||||||| ||   |||||||||||||||||||    
T  332 cgctaattttgtaaaggttactagcttatcccgtttaaaaagctaagttagtgaaaatctcaagg 268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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