View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19349_low_20 (Length: 267)
Name: NF19349_low_20
Description: NF19349
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19349_low_20 |
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Alignment Details
Target: chr6 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 18 - 262
Target Start/End: Original strand, 27098660 - 27098904
Alignment:
| Q |
18 |
aattaagacattacattaattttctaaatccactctctatttaagatttgattagtgaaatgaagtaattgaaattcttcacacacactactgagtaaga |
117 |
Q |
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| T |
27098660 |
aattaagacattacattaattttctaaatccactctctatttaagatttgattagtgaaatgaagtaattgaaattcttcacacacactactgagtaaga |
27098759 |
T |
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| Q |
118 |
gaggaattagcattaccagtagaaggatcagaagaatttgagaaacaagaattcttatgattatgcatccaaaccttaaaaacttgtctactcacaccaa |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27098760 |
gaggaattagcattaccagtagaaggatcagaagaatttgagaaacaagaattcttatgattatgcatccaaaccttaaaaacttgtctactcacaccaa |
27098859 |
T |
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| Q |
218 |
cactttcacaaaacctttcaatctcttcatcaagttcttctctct |
262 |
Q |
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| T |
27098860 |
cactttcacaaaacctttcaatctcttcatcaagttcttttctct |
27098904 |
T |
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