View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19350_low_4 (Length: 306)

Name: NF19350_low_4
Description: NF19350
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19350_low_4
NF19350_low_4
[»] chr6 (56 HSPs)
chr6 (24-87)||(10083213-10083276)
chr6 (211-289)||(19412037-19412115)
chr6 (119-188)||(6389736-6389805)
chr6 (118-195)||(17168453-17168530)
chr6 (117-179)||(2153893-2153955)
chr6 (126-198)||(34446565-34446637)
chr6 (129-196)||(26247429-26247496)
chr6 (118-172)||(9658871-9658925)
chr6 (118-179)||(5732516-5732577)
chr6 (118-179)||(7938108-7938169)
chr6 (118-179)||(7977836-7977897)
chr6 (118-178)||(12696316-12696376)
chr6 (118-178)||(17341671-17341731)
chr6 (118-178)||(19040344-19040404)
chr6 (211-291)||(19649868-19649948)
chr6 (117-172)||(7625113-7625168)
chr6 (134-177)||(32511674-32511717)
chr6 (117-179)||(7086786-7086848)
chr6 (127-177)||(7569176-7569226)
chr6 (137-179)||(7973665-7973707)
chr6 (118-176)||(17841598-17841656)
chr6 (117-179)||(21395314-21395375)
chr6 (118-179)||(7265599-7265660)
chr6 (134-179)||(9195760-9195805)
chr6 (118-179)||(10842524-10842585)
chr6 (118-179)||(16766689-16766750)
chr6 (118-179)||(18252757-18252818)
chr6 (211-280)||(19658873-19658942)
chr6 (134-179)||(25038077-25038122)
chr6 (118-179)||(26562681-26562742)
chr6 (134-178)||(17302355-17302399)
chr6 (118-178)||(33340392-33340452)
chr6 (118-178)||(35125646-35125706)
chr6 (134-193)||(8389465-8389523)
chr6 (118-177)||(20576641-20576700)
chr6 (118-179)||(3209373-3209435)
chr6 (117-171)||(8805586-8805640)
chr6 (119-185)||(12086345-12086411)
chr6 (126-180)||(12235524-12235578)
chr6 (118-172)||(24833246-24833300)
chr6 (118-179)||(426520-426581)
chr6 (119-180)||(6299505-6299566)
chr6 (119-180)||(6306315-6306376)
chr6 (118-179)||(6898287-6898348)
chr6 (134-179)||(9025500-9025545)
chr6 (118-179)||(9027170-9027231)
chr6 (134-179)||(9522899-9522944)
chr6 (118-179)||(9629375-9629436)
chr6 (118-179)||(13851728-13851789)
chr6 (118-179)||(19044456-19044517)
chr6 (118-179)||(33001295-33001356)
chr6 (118-179)||(34595126-34595187)
chr6 (119-179)||(8931608-8931668)
chr6 (119-179)||(9107376-9107436)
chr6 (30-66)||(10078977-10079013)
chr6 (140-184)||(31327829-31327873)
[»] chr4 (43 HSPs)
chr4 (117-198)||(24343498-24343579)
chr4 (118-190)||(20743273-20743345)
chr4 (127-196)||(3144641-3144710)
chr4 (120-179)||(13134444-13134503)
chr4 (118-179)||(2361981-2362042)
chr4 (118-179)||(12895280-12895341)
chr4 (122-205)||(23386141-23386225)
chr4 (116-191)||(6273934-6274009)
chr4 (124-171)||(32910549-32910596)
chr4 (119-195)||(53381586-53381658)
chr4 (118-167)||(34515892-34515941)
chr4 (118-179)||(40613442-40613503)
chr4 (117-165)||(7012057-7012105)
chr4 (133-177)||(55941011-55941055)
chr4 (124-179)||(8423724-8423779)
chr4 (118-193)||(11651126-11651201)
chr4 (119-178)||(14126118-14126177)
chr4 (118-185)||(16402211-16402278)
chr4 (134-177)||(27706185-27706228)
chr4 (126-177)||(37203264-37203315)
chr4 (117-168)||(43299988-43300039)
chr4 (134-168)||(17446079-17446113)
chr4 (134-172)||(21539880-21539918)
chr4 (118-179)||(30298938-30299000)
chr4 (118-179)||(30327806-30327868)
chr4 (126-168)||(43300616-43300658)
chr4 (118-179)||(49431017-49431079)
chr4 (134-179)||(5775364-5775409)
chr4 (134-179)||(6485617-6485662)
chr4 (118-179)||(16303272-16303333)
chr4 (118-198)||(20521838-20521916)
chr4 (118-179)||(23292992-23293053)
chr4 (134-175)||(30838218-30838259)
chr4 (118-179)||(35157991-35158052)
chr4 (133-170)||(43506175-43506212)
chr4 (134-179)||(54580029-54580074)
chr4 (139-179)||(17344513-17344553)
chr4 (132-180)||(19230314-19230362)
chr4 (152-196)||(20633508-20633552)
chr4 (216-280)||(31023072-31023136)
chr4 (124-184)||(46971900-46971960)
chr4 (124-168)||(47191010-47191054)
chr4 (114-177)||(51701248-51701309)
[»] chr7 (51 HSPs)
chr7 (117-204)||(4017775-4017862)
chr7 (118-190)||(43249985-43250057)
chr7 (116-204)||(38804536-38804624)
chr7 (231-291)||(7467339-7467399)
chr7 (134-177)||(8160424-8160467)
chr7 (121-180)||(13770686-13770745)
chr7 (125-200)||(23930218-23930293)
chr7 (118-172)||(3554519-3554573)
chr7 (118-172)||(5235978-5236032)
chr7 (127-185)||(12278836-12278894)
chr7 (118-179)||(15680801-15680862)
chr7 (117-198)||(17780071-17780152)
chr7 (134-179)||(27732245-27732290)
chr7 (118-179)||(27945033-27945094)
chr7 (124-172)||(27093426-27093474)
chr7 (124-172)||(27184827-27184875)
chr7 (119-179)||(28155563-28155623)
chr7 (124-191)||(29812658-29812725)
chr7 (124-198)||(7133265-7133339)
chr7 (118-179)||(1433446-1433507)
chr7 (118-179)||(2948675-2948736)
chr7 (131-200)||(5938477-5938546)
chr7 (134-179)||(7328697-7328742)
chr7 (118-179)||(15902814-15902875)
chr7 (134-179)||(21880160-21880205)
chr7 (118-179)||(22484017-22484078)
chr7 (118-179)||(24339634-24339695)
chr7 (134-178)||(18013081-18013125)
chr7 (125-185)||(23751899-23751959)
chr7 (119-171)||(29787383-29787435)
chr7 (118-178)||(32308112-32308172)
chr7 (118-177)||(5233621-5233680)
chr7 (118-177)||(25481894-25481953)
chr7 (126-172)||(16341496-16341542)
chr7 (118-168)||(21568639-21568689)
chr7 (134-179)||(3721101-3721146)
chr7 (134-179)||(9408340-9408385)
chr7 (118-179)||(11061082-11061143)
chr7 (134-179)||(19992009-19992054)
chr7 (118-179)||(20549783-20549844)
chr7 (118-179)||(22602716-22602777)
chr7 (118-179)||(24105670-24105731)
chr7 (125-178)||(25239710-25239763)
chr7 (134-174)||(8056956-8056995)
chr7 (132-196)||(10230062-10230126)
chr7 (134-178)||(17851439-17851483)
chr7 (127-179)||(18233604-18233656)
chr7 (119-179)||(19206043-19206103)
chr7 (217-293)||(21145908-21145984)
chr7 (118-178)||(22868034-22868094)
chr7 (134-170)||(30813820-30813856)
[»] chr2 (41 HSPs)
chr2 (116-195)||(19573968-19574047)
chr2 (211-283)||(9758128-9758200)
chr2 (121-180)||(10535764-10535823)
chr2 (117-191)||(23354646-23354720)
chr2 (119-168)||(22084997-22085046)
chr2 (118-179)||(30404856-30404917)
chr2 (118-179)||(42832282-42832343)
chr2 (121-189)||(24011031-24011099)
chr2 (119-178)||(21374706-21374765)
chr2 (118-177)||(21616754-21616813)
chr2 (216-291)||(44255286-44255361)
chr2 (118-188)||(5891776-5891845)
chr2 (118-179)||(6940247-6940308)
chr2 (126-179)||(18255986-18256039)
chr2 (118-171)||(21782832-21782885)
chr2 (118-179)||(31018582-31018643)
chr2 (118-178)||(21091715-21091775)
chr2 (125-189)||(30563408-30563472)
chr2 (118-178)||(31808069-31808129)
chr2 (118-198)||(37986771-37986851)
chr2 (134-173)||(23921261-23921300)
chr2 (118-177)||(24894381-24894440)
chr2 (117-168)||(30298464-30298515)
chr2 (134-172)||(2665901-2665939)
chr2 (117-191)||(23354989-23355063)
chr2 (134-172)||(40361767-40361805)
chr2 (134-195)||(1239650-1239711)
chr2 (134-179)||(12668429-12668474)
chr2 (118-179)||(15972865-15972926)
chr2 (118-171)||(16069268-16069321)
chr2 (118-179)||(18420440-18420501)
chr2 (118-179)||(18421955-18422016)
chr2 (134-179)||(18841019-18841064)
chr2 (118-179)||(20539680-20539741)
chr2 (118-179)||(23718018-23718079)
chr2 (118-179)||(24105690-24105751)
chr2 (134-179)||(30527601-30527646)
chr2 (134-175)||(31456651-31456692)
chr2 (125-178)||(39323263-39323316)
chr2 (134-170)||(1374620-1374656)
chr2 (251-291)||(20116504-20116544)
[»] chr8 (45 HSPs)
chr8 (118-190)||(44067508-44067580)
chr8 (118-195)||(26915230-26915307)
chr8 (124-188)||(13009490-13009554)
chr8 (117-172)||(39954292-39954347)
chr8 (118-179)||(4786344-4786405)
chr8 (118-179)||(13844602-13844663)
chr8 (118-179)||(15816135-15816196)
chr8 (118-179)||(20873061-20873122)
chr8 (118-177)||(22595986-22596045)
chr8 (117-178)||(24362209-24362270)
chr8 (118-179)||(24669425-24669486)
chr8 (118-179)||(27213539-27213600)
chr8 (118-179)||(31236583-31236644)
chr8 (134-179)||(31580133-31580178)
chr8 (118-179)||(34897077-34897138)
chr8 (124-185)||(35431140-35431201)
chr8 (118-195)||(41831930-41832007)
chr8 (125-185)||(1676711-1676771)
chr8 (124-184)||(2035737-2035797)
chr8 (119-179)||(4298892-4298952)
chr8 (134-185)||(25886993-25887045)
chr8 (127-179)||(33382025-33382077)
chr8 (117-185)||(39820420-39820488)
chr8 (121-172)||(7658458-7658509)
chr8 (134-177)||(11803267-11803310)
chr8 (134-177)||(14731720-14731763)
chr8 (118-193)||(41838115-41838190)
chr8 (117-179)||(2572062-2572124)
chr8 (121-179)||(11927092-11927150)
chr8 (117-179)||(12570514-12570576)
chr8 (134-172)||(13203649-13203687)
chr8 (117-198)||(14679325-14679404)
chr8 (134-195)||(34222955-34223016)
chr8 (134-179)||(8342980-8343025)
chr8 (117-178)||(8343307-8343368)
chr8 (134-179)||(20679401-20679446)
chr8 (118-179)||(25192353-25192414)
chr8 (134-179)||(33405390-33405435)
chr8 (134-178)||(3025559-3025603)
chr8 (119-191)||(3911103-3911175)
chr8 (124-172)||(4611532-4611580)
chr8 (118-178)||(10497823-10497883)
chr8 (119-179)||(11944658-11944718)
chr8 (120-172)||(14634154-14634206)
chr8 (118-178)||(27101507-27101566)
[»] chr1 (53 HSPs)
chr1 (126-198)||(42004934-42005006)
chr1 (124-199)||(40747759-40747834)
chr1 (121-179)||(41877476-41877534)
chr1 (119-179)||(5376506-5376566)
chr1 (127-198)||(6936387-6936458)
chr1 (118-179)||(36878453-36878514)
chr1 (124-188)||(39101179-39101243)
chr1 (118-180)||(3490395-3490457)
chr1 (134-172)||(12713340-12713378)
chr1 (134-172)||(12717431-12717469)
chr1 (119-177)||(13436451-13436509)
chr1 (118-172)||(34257923-34257977)
chr1 (121-179)||(39953152-39953210)
chr1 (118-179)||(1486715-1486776)
chr1 (118-179)||(6612177-6612238)
chr1 (118-179)||(13997875-13997936)
chr1 (118-179)||(19058862-19058923)
chr1 (118-179)||(21530681-21530742)
chr1 (118-179)||(22515893-22515954)
chr1 (118-179)||(22881622-22881683)
chr1 (138-179)||(25272494-25272535)
chr1 (134-175)||(37055866-37055907)
chr1 (134-179)||(39130773-39130818)
chr1 (118-179)||(46348389-46348450)
chr1 (118-179)||(47989490-47989550)
chr1 (116-168)||(48415742-48415795)
chr1 (118-179)||(48450593-48450654)
chr1 (118-178)||(398772-398832)
chr1 (118-178)||(14359529-14359588)
chr1 (134-195)||(21038091-21038158)
chr1 (134-178)||(34712390-34712434)
chr1 (134-194)||(49872845-49872905)
chr1 (118-177)||(113291-113350)
chr1 (124-179)||(1864886-1864941)
chr1 (118-169)||(12443476-12443527)
chr1 (119-177)||(7988459-7988517)
chr1 (134-172)||(14332655-14332693)
chr1 (118-180)||(17831536-17831598)
chr1 (118-180)||(22794083-22794145)
chr1 (121-179)||(23714710-23714768)
chr1 (118-179)||(1815249-1815310)
chr1 (134-179)||(18190114-18190159)
chr1 (118-179)||(21378570-21378631)
chr1 (134-179)||(22907345-22907390)
chr1 (121-178)||(32724105-32724162)
chr1 (118-166)||(2896140-2896188)
chr1 (118-179)||(5944273-5944336)
chr1 (134-178)||(7918218-7918262)
chr1 (134-178)||(15323171-15323215)
chr1 (118-178)||(17754303-17754363)
chr1 (127-179)||(24176373-24176425)
chr1 (136-172)||(44506137-44506173)
chr1 (119-179)||(52903242-52903302)
[»] chr3 (49 HSPs)
chr3 (118-185)||(24205041-24205108)
chr3 (117-198)||(14223840-14223921)
chr3 (116-196)||(8903422-8903501)
chr3 (207-291)||(31105389-31105473)
chr3 (119-195)||(34307770-34307846)
chr3 (118-195)||(5339100-5339177)
chr3 (116-185)||(15864823-15864892)
chr3 (127-198)||(21211289-21211360)
chr3 (127-198)||(25326427-25326498)
chr3 (118-196)||(25074781-25074859)
chr3 (125-191)||(52369774-52369840)
chr3 (118-179)||(8383249-8383310)
chr3 (127-196)||(12704646-12704715)
chr3 (118-178)||(10268493-10268553)
chr3 (118-178)||(32804547-32804607)
chr3 (119-198)||(25652018-25652097)
chr3 (133-196)||(25892467-25892530)
chr3 (118-179)||(4990973-4991034)
chr3 (118-179)||(8039841-8039902)
chr3 (118-179)||(9800032-9800093)
chr3 (124-177)||(11313808-11313861)
chr3 (118-179)||(34185129-34185190)
chr3 (117-178)||(49505161-49505222)
chr3 (134-182)||(1830351-1830399)
chr3 (117-177)||(16192758-16192818)
chr3 (134-190)||(17568678-17568734)
chr3 (118-177)||(4987299-4987358)
chr3 (118-177)||(25948895-25948954)
chr3 (127-198)||(27903633-27903704)
chr3 (116-178)||(14209103-14209165)
chr3 (118-195)||(21479110-21479188)
chr3 (118-192)||(41319303-41319377)
chr3 (134-172)||(47362570-47362608)
chr3 (121-179)||(55401070-55401128)
chr3 (134-179)||(1509547-1509592)
chr3 (118-179)||(1514609-1514670)
chr3 (118-179)||(8789556-8789617)
chr3 (118-170)||(14747553-14747606)
chr3 (117-174)||(14840302-14840359)
chr3 (118-179)||(16000022-16000083)
chr3 (118-171)||(25064901-25064954)
chr3 (134-171)||(27277852-27277889)
chr3 (118-179)||(28917993-28918054)
chr3 (124-172)||(7614428-7614476)
chr3 (118-178)||(11610513-11610573)
chr3 (123-167)||(16789668-16789712)
chr3 (119-179)||(25093495-25093555)
chr3 (118-178)||(48202276-48202336)
chr3 (123-179)||(55212960-55213016)
[»] chr5 (40 HSPs)
chr5 (125-198)||(43554520-43554593)
chr5 (117-200)||(25863195-25863278)
chr5 (118-185)||(7997166-7997233)
chr5 (118-168)||(42469213-42469263)
chr5 (118-179)||(14674261-14674322)
chr5 (118-179)||(28588680-28588741)
chr5 (118-179)||(33178017-33178078)
chr5 (134-179)||(36838551-36838596)
chr5 (118-178)||(27144455-27144515)
chr5 (118-173)||(22013406-22013461)
chr5 (124-195)||(39695989-39696060)
chr5 (126-168)||(18162055-18162097)
chr5 (121-179)||(19579696-19579754)
chr5 (120-170)||(27932229-27932279)
chr5 (132-189)||(5467974-5468031)
chr5 (211-280)||(15209482-15209551)
chr5 (118-179)||(24906307-24906368)
chr5 (124-168)||(2577197-2577241)
chr5 (118-178)||(6326304-6326364)
chr5 (123-179)||(16203801-16203857)
chr5 (118-178)||(32630742-32630802)
chr5 (132-179)||(2548393-2548440)
chr5 (126-177)||(6471897-6471948)
chr5 (118-177)||(15410456-15410515)
chr5 (117-172)||(35017028-35017083)
chr5 (119-177)||(19293431-19293489)
chr5 (118-196)||(26205749-26205827)
chr5 (134-180)||(31264446-31264492)
chr5 (118-179)||(43564875-43564934)
chr5 (118-179)||(3966495-3966556)
chr5 (118-179)||(6247614-6247675)
chr5 (118-179)||(11685931-11685992)
chr5 (123-172)||(18592070-18592119)
chr5 (118-179)||(21522742-21522803)
chr5 (118-179)||(21533308-21533369)
chr5 (118-179)||(31084315-31084376)
chr5 (118-179)||(36642768-36642829)
chr5 (119-179)||(13287405-13287465)
chr5 (124-180)||(18607102-18607158)
chr5 (125-177)||(43001799-43001851)
[»] scaffold0007 (1 HSPs)
scaffold0007 (118-190)||(225263-225335)
[»] scaffold0004 (1 HSPs)
scaffold0004 (118-178)||(92799-92859)
[»] scaffold0236 (1 HSPs)
scaffold0236 (126-179)||(25774-25827)
[»] scaffold0171 (1 HSPs)
scaffold0171 (118-179)||(23412-23473)
[»] scaffold0018 (1 HSPs)
scaffold0018 (118-178)||(192256-192316)
[»] scaffold0136 (1 HSPs)
scaffold0136 (123-178)||(3856-3911)
[»] scaffold0697 (1 HSPs)
scaffold0697 (118-179)||(1636-1697)
[»] scaffold0044 (1 HSPs)
scaffold0044 (118-179)||(53172-53233)
[»] scaffold0003 (1 HSPs)
scaffold0003 (118-179)||(241586-241647)
[»] scaffold0223 (1 HSPs)
scaffold0223 (118-178)||(20164-20224)
[»] scaffold0199 (1 HSPs)
scaffold0199 (125-185)||(1948-2008)
[»] scaffold0110 (1 HSPs)
scaffold0110 (119-179)||(28843-28903)
[»] scaffold0066 (1 HSPs)
scaffold0066 (118-194)||(33355-33430)
[»] scaffold0227 (1 HSPs)
scaffold0227 (118-177)||(7319-7378)
[»] scaffold0103 (1 HSPs)
scaffold0103 (118-177)||(51803-51862)
[»] scaffold0598 (1 HSPs)
scaffold0598 (117-167)||(8071-8121)
[»] scaffold0306 (1 HSPs)
scaffold0306 (118-195)||(13392-13470)
[»] scaffold0152 (1 HSPs)
scaffold0152 (118-195)||(21857-21935)
[»] scaffold0050 (1 HSPs)
scaffold0050 (125-179)||(70277-70331)
[»] scaffold0053 (1 HSPs)
scaffold0053 (118-179)||(8790-8851)
[»] scaffold0049 (1 HSPs)
scaffold0049 (134-179)||(63781-63826)
[»] scaffold0027 (1 HSPs)
scaffold0027 (118-179)||(46674-46735)
[»] scaffold0011 (1 HSPs)
scaffold0011 (134-179)||(17755-17800)
[»] scaffold1528 (1 HSPs)
scaffold1528 (118-178)||(1027-1087)
[»] scaffold0722 (1 HSPs)
scaffold0722 (125-177)||(7040-7092)
[»] scaffold0022 (1 HSPs)
scaffold0022 (125-177)||(99892-99944)
[»] scaffold0020 (1 HSPs)
scaffold0020 (119-179)||(135318-135378)
[»] scaffold0008 (1 HSPs)
scaffold0008 (134-178)||(263379-263423)


Alignment Details
Target: chr6 (Bit Score: 64; Significance: 5e-28; HSPs: 56)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 24 - 87
Target Start/End: Complemental strand, 10083276 - 10083213
Alignment:
Q  24 agggaaatctcattttgtccattgtattgcatataattctaagcatgtacgtttgtgcatataa 87  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10083276 agggaaatctcattttgtccattgtattgcatataattctaagcatgtacgtttgtgcatataa 10083213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 211 - 289
Target Start/End: Original strand, 19412037 - 19412115
Alignment:
Q  211 aaatagtagctaattatttagatatttactaccattacacttcctagcacagtcatggtagcaaatcttatatattctt 289  Q
    |||| |||| ||||||||  ||||||||||||||||||| |||| |||||| ||||||||||||||||||||| |||||    
T  19412037 aaattgtagttaattattatgatatttactaccattacatttccgagcacaatcatggtagcaaatcttatattttctt 19412115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 119 - 188
Target Start/End: Original strand, 6389736 - 6389805
Alignment:
Q  119 acacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcgtatcggtgt 188  Q
    |||||||||||||||||||||||| ||||||| | ||||||||||||||| ||| ||||||| |||||||    
T  6389736 acacgccgacacggataataatttgagaaaatgatataatttagtgtaatcataggtgtcgtgtcggtgt 6389805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 118 - 195
Target Start/End: Complemental strand, 17168530 - 17168453
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcgtatcggtgtcggacac 195  Q
    |||||||| |||| ||||||||||| ||||||| | ||||||||||||||| ||| ||||||| ||||||||||||||    
T  17168530 gacacgccaacactgataataatttgagaaaatgatataatttagtgtaataataggtgtcgtgtcggtgtcggacac 17168453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 117 - 179
Target Start/End: Complemental strand, 2153955 - 2153893
Alignment:
Q  117 cgacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||||||||| | |||||||||||||||| | ||||||||||||||||||| ||||||    
T  2153955 cgacacgccgacacgaacaataatttaagaaaatgatataatttagtgtaattataggtgtcg 2153893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 126 - 198
Target Start/End: Original strand, 34446565 - 34446637
Alignment:
Q  126 gacacggataataatttaagaaaattacataatttagtgtaattataagtgtcgtatcggtgtcggacaccga 198  Q
    ||||||||||||||||| ||||||| |||||||| |||||||| ||| ||||||| ||||||||  |||||||    
T  34446565 gacacggataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtccaacaccga 34446637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 196
Target Start/End: Original strand, 26247429 - 26247496
Alignment:
Q  129 acggataataatttaagaaaattacataatttagtgtaattataagtgtcgtatcggtgtcggacacc 196  Q
    |||||||||||||||||||||| ||||| |||||| |||| ||| || |||| |||||||||||||||    
T  26247429 acggataataatttaagaaaatgacatattttagtataatcataggtttcgtgtcggtgtcggacacc 26247496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 118 - 172
Target Start/End: Original strand, 9658871 - 9658925
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattata 172  Q
    ||||||||||||| | ||||||||||||||||| |||||||| ||||||||||||    
T  9658871 gacacgccgacaccgctaataatttaagaaaatcacataattcagtgtaattata 9658925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 5732577 - 5732516
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||||||| | ||||||||| ||||||| ||||| ||||||||||||||| ||||||    
T  5732577 gacacgccgacaccgttaataatttgagaaaatcacatattttagtgtaattatatgtgtcg 5732516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 7938108 - 7938169
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||||||| | ||||||||| | ||||| | ||||||||||||||||||||||||||    
T  7938108 gacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaattataagtgtcg 7938169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 7977897 - 7977836
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||||||| | ||||||||| | |||||||||||||| |||||||||| ||||||||    
T  7977897 gacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgtcg 7977836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 118 - 178
Target Start/End: Original strand, 12696316 - 12696376
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtc 178  Q
    ||||||||||||| | ||||||||| | |||||||||||||| |||||||||| |||||||    
T  12696316 gacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgtc 12696376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 17341731 - 17341671
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtc 178  Q
    ||||||||||||| | ||||||||| | ||||| |||||||| ||||||||||||||||||    
T  17341731 gacacgccgacaccgttaataatttgataaaatcacataattcagtgtaattataagtgtc 17341671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 118 - 178
Target Start/End: Original strand, 19040344 - 19040404
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtc 178  Q
    ||||||||||||| | ||||||||| ||||||| |||||||| |||||||||||| |||||    
T  19040344 gacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtc 19040404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 211 - 291
Target Start/End: Complemental strand, 19649948 - 19649868
Alignment:
Q  211 aaatagtagctaattatttagatatttactaccattacacttcctagcacagtcatggtagcaaatcttatatattcttgt 291  Q
    |||| |||||||||||| | ||||||  |||| |||| | |||||||||||||||| ||||||||||||| || |||||||    
T  19649948 aaatggtagctaattatgttgatattctctacaattaaatttcctagcacagtcatagtagcaaatcttagattttcttgt 19649868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 172
Target Start/End: Original strand, 7625113 - 7625168
Alignment:
Q  117 cgacacgccgacacggataataatttaagaaaattacataatttagtgtaattata 172  Q
    ||||||| |||||||||||||||||| ||||||| | |||||||||| ||||||||    
T  7625113 cgacacgtcgacacggataataatttgagaaaatgatataatttagtataattata 7625168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 134 - 177
Target Start/End: Complemental strand, 32511717 - 32511674
Alignment:
Q  134 taataatttaagaaaattacataatttagtgtaattataagtgt 177  Q
    ||||||||||||||||| |||||||| |||||||||||||||||    
T  32511717 taataatttaagaaaatcacataattcagtgtaattataagtgt 32511674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 179
Target Start/End: Original strand, 7086786 - 7086848
Alignment:
Q  117 cgacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||| || ||| | ||||||||| ||||||| ||||||||||||||||||||| ||||||    
T  7086786 cgacacgtcggcactgctaataatttgagaaaatcacataatttagtgtaattatatgtgtcg 7086848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 177
Target Start/End: Complemental strand, 7569226 - 7569176
Alignment:
Q  127 acacggataataatttaagaaaattacataatttagtgtaattataagtgt 177  Q
    |||| ||||||||||| |||||||||||||||| |||||||||||| ||||    
T  7569226 acacagataataatttgagaaaattacataattcagtgtaattataggtgt 7569176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 179
Target Start/End: Original strand, 7973665 - 7973707
Alignment:
Q  137 taatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    |||||||| |||||||||||||| |||||||||||||||||||    
T  7973665 taatttaaaaaaattacataattaagtgtaattataagtgtcg 7973707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 118 - 176
Target Start/End: Complemental strand, 17841656 - 17841598
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtg 176  Q
    ||||||||||||| | ||||||||| | ||||| ||||||||||||||||||| |||||    
T  17841656 gacacgccgacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtg 17841598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 179
Target Start/End: Complemental strand, 21395375 - 21395314
Alignment:
Q  117 cgacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||| |||| | ||||||||| ||||||| ||||||||||||||||||| ||||||||    
T  21395375 cgacacgccaacaccgctaataatttgagaaaat-acataatttagtgtaattacaagtgtcg 21395314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 7265660 - 7265599
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    |||||||| |||| | ||||||||| ||||||| |||||||| |||||||||||| ||||||    
T  7265660 gacacgccaacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcg 7265599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 9195805 - 9195760
Alignment:
Q  134 taataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||| ||||||| ||||||||||||||||||||| ||||||    
T  9195805 taataatttgagaaaatgacataatttagtgtaattatatgtgtcg 9195760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 10842524 - 10842585
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||||||| | ||||||||| | ||||| ||||||||||||||||| ||| ||||||    
T  10842524 gacacgccgacaccgctaataatttgaaaaaatcacataatttagtgtaatcatatgtgtcg 10842585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 16766689 - 16766750
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||||||| | ||||||||| | ||||| |||||||| |||||||||| ||||||||    
T  16766689 gacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 16766750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 18252818 - 18252757
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||| |||| || ||||||||||||| ||||| ||||||||||||||||||| | ||||||    
T  18252818 gacactccgataccgataataatttaaaaaaatgacataatttagtgtaattacaggtgtcg 18252757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 211 - 280
Target Start/End: Original strand, 19658873 - 19658942
Alignment:
Q  211 aaatagtagctaattatttagatatttactaccattacacttcctagcacagtcatggtagcaaatctta 280  Q
    |||| |||||||||||| | ||||||  ||||||||| | ||||||||||| ||||||||||||| ||||    
T  19658873 aaatggtagctaattatgttgatattcgctaccattaaatttcctagcacactcatggtagcaaaactta 19658942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 25038122 - 25038077
Alignment:
Q  134 taataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||| ||||||||||||||||||||||||||| || |||||    
T  25038122 taataatttgagaaaattacataatttagtgtaattacaaatgtcg 25038077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 26562681 - 26562742
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||||||| | ||| ||||| ||||||| |||||||| |||||||||||| ||||||    
T  26562681 gacacgccgacactgctaaaaatttgagaaaatcacataattcagtgtaattatatgtgtcg 26562742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 17302355 - 17302399
Alignment:
Q  134 taataatttaagaaaattacataatttagtgtaattataagtgtc 178  Q
    ||||||||||||||||| ||||||||| ||||||||||| |||||    
T  17302355 taataatttaagaaaatcacataattttgtgtaattatatgtgtc 17302399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 33340452 - 33340392
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtc 178  Q
    ||||||||||||| | | ||||||||| ||||| ||||| |||| ||||||||||||||||    
T  33340452 gacacgccgacaccgttgataatttaaaaaaatcacatattttactgtaattataagtgtc 33340392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 178
Target Start/End: Original strand, 35125646 - 35125706
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtc 178  Q
    ||||||||||||| | | ||||||||| ||||| ||||| |||| ||||||||||||||||    
T  35125646 gacacgccgacaccgttgataatttaaaaaaatcacatattttactgtaattataagtgtc 35125706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 134 - 193
Target Start/End: Complemental strand, 8389523 - 8389465
Alignment:
Q  134 taataatttaagaaaattacataatttagtgtaattataagtgtcgtatcggtgtcggac 193  Q
    ||||||||||||||||| | |||||| ||||||||||| |||||| | ||||||||||||    
T  8389523 taataatttaagaaaatcatataattcagtgtaattat-agtgtcatgtcggtgtcggac 8389465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 177
Target Start/End: Complemental strand, 20576700 - 20576641
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgt 177  Q
    ||||| ||||| ||| ||||||||  |||||||| ||||||| |||||||||||||||||    
T  20576700 gacacaccgacgcggctaataattcgagaaaattgcataattcagtgtaattataagtgt 20576641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 3209373 - 3209435
Alignment:
Q  118 gacacgccgacacggataataattt-aagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||||||| | ||||||||| || ||||| |||||||||||||| |||| ||||||||    
T  3209373 gacacgccgacacagctaataatttgaaaaaaatcacataatttagtgttattacaagtgtcg 3209435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 171
Target Start/End: Complemental strand, 8805640 - 8805586
Alignment:
Q  117 cgacacgccgacacggataataatttaagaaaattacataatttagtgtaattat 171  Q
    ||||||| || ||| | ||||||||| ||||||| ||||||||||||||||||||    
T  8805640 cgacacgtcggcactgctaataatttgagaaaatcacataatttagtgtaattat 8805586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 185
Target Start/End: Complemental strand, 12086411 - 12086345
Alignment:
Q  119 acacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcgtatcgg 185  Q
    ||||| |||||||||||||||||| ||| ||| |||||||| ||| |||| ||| ||||||| ||||    
T  12086411 acacgtcgacacggataataatttgagataatgacataattcagtttaatcataggtgtcgtgtcgg 12086345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 180
Target Start/End: Complemental strand, 12235578 - 12235524
Alignment:
Q  126 gacacggataataatttaagaaaattacataatttagtgtaattataagtgtcgt 180  Q
    ||||||||||||||||  ||||||| |||||||| |||||||| ||| |||||||    
T  12235578 gacacggataataattagagaaaatgacataattcagtgtaatcataggtgtcgt 12235524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 172
Target Start/End: Complemental strand, 24833300 - 24833246
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattata 172  Q
    |||||||||||||   |||||| ||||||||||  ||||||||||||||||||||    
T  24833300 gacacgccgacactactaataagttaagaaaatcgcataatttagtgtaattata 24833246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 426581 - 426520
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||||||| | ||||||||| | ||||| |||||||| | |||||||| ||||||||    
T  426581 gacacgccgacacagttaataatttgaaaaaatcacataattaaatgtaattacaagtgtcg 426520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 180
Target Start/End: Original strand, 6299505 - 6299566
Alignment:
Q  119 acacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcgt 180  Q
    ||||||||||| |||||||||||| ||||||| | |||||| | |||||| ||| |||||||    
T  6299505 acacgccgacatggataataatttgagaaaatgatataattcaatgtaatgataggtgtcgt 6299566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 180
Target Start/End: Original strand, 6306315 - 6306376
Alignment:
Q  119 acacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcgt 180  Q
    ||||||||||| |||||||||||| ||||||| | |||||| | |||||| ||| |||||||    
T  6306315 acacgccgacatggataataatttgagaaaatgatataattcaatgtaatgataggtgtcgt 6306376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 6898348 - 6898287
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||| ||||||  ||||||||| |  ||||||||||||| |||||||||| ||||||||    
T  6898348 gacacgctgacacgtctaataatttgaacaaattacataattaagtgtaattacaagtgtcg 6898287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 9025545 - 9025500
Alignment:
Q  134 taataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||| ||||||| |||||||| |||||||||||| ||||||    
T  9025545 taataatttgagaaaatcacataattcagtgtaattatatgtgtcg 9025500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 9027170 - 9027231
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||||||| | ||||||||| ||| ||| ||||||||  ||||||||||| ||||||    
T  9027170 gacacgccgacaccgctaataatttgagataatcacataattccgtgtaattatatgtgtcg 9027231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 9522899 - 9522944
Alignment:
Q  134 taataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||||| ||||| |||||||| |||||||||| ||||||||    
T  9522899 taataatttaaaaaaatcacataattcagtgtaattacaagtgtcg 9522944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 9629375 - 9629436
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||||||| |  |||||||| ||||||| |||||||| | |||||||||| ||||||    
T  9629375 gacacgccgacaccgccaataatttgagaaaatcacataattcaatgtaattatatgtgtcg 9629436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 13851728 - 13851789
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    |||||| |||||| | ||||||||| ||||||| || ||||| |||||||||||| ||||||    
T  13851728 gacacgtcgacaccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgtcg 13851789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 19044456 - 19044517
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||||||||  ||||||||| |||| || |||||||| ||||| |||||| ||||||    
T  19044456 gacacgccgacacgactaataatttgagaatatcacataattcagtgttattatatgtgtcg 19044517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 33001356 - 33001295
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||||||| | ||||||||| | ||||| |||||||| | |||||||||| ||||||    
T  33001356 gacacgccgacactgctaataatttgaaaaaatcacataattaaatgtaattatatgtgtcg 33001295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 34595126 - 34595187
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    |||||||||||||   ||||||||| | ||||| |||||||| |||||||||| ||||||||    
T  34595126 gacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 34595187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 179
Target Start/End: Complemental strand, 8931668 - 8931608
Alignment:
Q  119 acacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    |||||||||||| | ||| ||||| ||||||| |||||||| ||| |||||||| ||||||    
T  8931668 acacgccgacacagctaaaaatttgagaaaataacataattcagtataattatatgtgtcg 8931608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 179
Target Start/End: Complemental strand, 9107436 - 9107376
Alignment:
Q  119 acacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    |||||||||||| | ||||||||| | ||||| ||| |||| |||||||||| ||||||||    
T  9107436 acacgccgacacagctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcg 9107376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 66
Target Start/End: Complemental strand, 10079013 - 10078977
Alignment:
Q  30 atctcattttgtccattgtattgcatataattctaag 66  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  10079013 atctcattttttccattgtattgcatataattttaag 10078977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 184
Target Start/End: Original strand, 31327829 - 31327873
Alignment:
Q  140 tttaagaaaattacataatttagtgtaattataagtgtcgtatcg 184  Q
    |||||||||||||||||||||| || ||| | |||||||||||||    
T  31327829 tttaagaaaattacataatttaatgcaatcacaagtgtcgtatcg 31327873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 8e-27; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 117 - 198
Target Start/End: Original strand, 24343498 - 24343579
Alignment:
Q  117 cgacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcgtatcggtgtcggacaccga 198  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||| |||||||| ||||||||    
T  24343498 cgacacgccgacacggataataatttgagaaaattacataattcagtgtaattataggtgtcgtgtcggtgtccgacaccga 24343579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 118 - 190
Target Start/End: Complemental strand, 20743345 - 20743273
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcgtatcggtgtcg 190  Q
    ||||||||||||||||||||||||| ||||||| |||||||| |||||||| ||| |||| || |||||||||    
T  20743345 gacacgccgacacggataataatttgagaaaatgacataattcagtgtaatcataggtgttgtgtcggtgtcg 20743273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 127 - 196
Target Start/End: Complemental strand, 3144710 - 3144641
Alignment:
Q  127 acacggataataatttaagaaaattacataatttagtgtaattataagtgtcgtatcggtgtcggacacc 196  Q
    |||||||||||||||| ||||||| | ||||||||||||||| ||| ||||||| |||||||| ||||||    
T  3144710 acacggataataatttcagaaaatgatataatttagtgtaatcataggtgtcgtgtcggtgtcagacacc 3144641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 120 - 179
Target Start/End: Original strand, 13134444 - 13134503
Alignment:
Q  120 cacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||||| | | ||||||||||||||| ||||||||||||||||||||| ||||||    
T  13134444 cacgccgacactgcttataatttaagaaaatcacataatttagtgtaattatatgtgtcg 13134503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 2362042 - 2361981
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||| ||||||| | ||||||||| | ||||||||||||||||||||||||| ||||||||    
T  2362042 gacacaccgacacagctaataatttgaaaaaattacataatttagtgtaattaaaagtgtcg 2361981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 12895341 - 12895280
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    |||||||||||||  |||||||||| | ||||| ||||||||| ||||||||||||||||||    
T  12895341 gacacgccgacacaaataataatttgaaaaaatcacataattttgtgtaattataagtgtcg 12895280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 122 - 205
Target Start/End: Original strand, 23386141 - 23386225
Alignment:
Q  122 cgccgacacggataataatttaagaaaatt-acataatttagtgtaattataagtgtcgtatcggtgtcggacaccgatgtgtga 205  Q
    |||||| |||||| ||||||||| |||| | | ||||||||||||||| ||| ||||| | ||||||||||||||| ||||||||    
T  23386141 cgccgatacggatgataatttaaaaaaaatgatataatttagtgtaatcataggtgtcatgtcggtgtcggacaccaatgtgtga 23386225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 6273934 - 6274009
Alignment:
Q  116 acgacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcgtatcggtgtcgg 191  Q
    ||||||||| ||||| || |||||||| ||||||| | |||||||||||||||||||   ||||| ||||||||||    
T  6273934 acgacacgctgacacagacaataatttgagaaaatgatataatttagtgtaattatagtcgtcgtgtcggtgtcgg 6274009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 124 - 171
Target Start/End: Original strand, 32910549 - 32910596
Alignment:
Q  124 ccgacacggataataatttaagaaaattacataatttagtgtaattat 171  Q
    ||||||||||||||||||| ||||||| |||||||| |||||||||||    
T  32910549 ccgacacggataataatttgagaaaatgacataattcagtgtaattat 32910596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 195
Target Start/End: Complemental strand, 53381658 - 53381586
Alignment:
Q  119 acacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcgtatcggtgtcggacac 195  Q
    |||||||||||| |||||||||||||||||||     |||| |||||||||||| | ||||| ||||||||||||||    
T  53381658 acacgccgacaccgataataatttaagaaaat----gaattcagtgtaattataggcgtcgtgtcggtgtcggacac 53381586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 167
Target Start/End: Complemental strand, 34515941 - 34515892
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaa 167  Q
    |||||| ||||||||||||||||| |||||||| |||||||| |||||||    
T  34515941 gacacgtcgacacggataataattcaagaaaatgacataattcagtgtaa 34515892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 40613442 - 40613503
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||||||| | ||||| ||| ||||||| |||||||| |||||||||||| ||||||    
T  40613442 gacacgccgacaccgctaatattttgagaaaatcacataattcagtgtaattatatgtgtcg 40613503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 165
Target Start/End: Original strand, 7012057 - 7012105
Alignment:
Q  117 cgacacgccgacacggataataatttaagaaaattacataatttagtgt 165  Q
    |||||||||||||| ||||||||||| ||||||| |||||||| |||||    
T  7012057 cgacacgccgacaccgataataatttgagaaaatgacataattcagtgt 7012105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 177
Target Start/End: Complemental strand, 55941055 - 55941011
Alignment:
Q  133 ataataatttaagaaaattacataatttagtgtaattataagtgt 177  Q
    ||||||||||||||||||||||||||||||| |||| ||| ||||    
T  55941055 ataataatttaagaaaattacataatttagtataatcatatgtgt 55941011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 124 - 179
Target Start/End: Complemental strand, 8423779 - 8423724
Alignment:
Q  124 ccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||| | ||||||||| ||||||| |||||||| ||||||||||||| |||||    
T  8423779 ccgacaccgctaataatttgagaaaatcacataattcagtgtaattataaatgtcg 8423724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 193
Target Start/End: Complemental strand, 11651201 - 11651126
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcgtatcggtgtcggac 193  Q
    |||||| |||||| | ||||||||||| ||||| |||||||| |||| || || |||||| || ||||||||||||    
T  11651201 gacacgtcgacacagctaataatttaaaaaaatcacataattcagtgcaactacaagtgttgtgtcggtgtcggac 11651126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 178
Target Start/End: Complemental strand, 14126177 - 14126118
Alignment:
Q  119 acacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtc 178  Q
    |||||||||||| | ||||||||| | ||| | |||||||| ||||||||||||||||||    
T  14126177 acacgccgacactgttaataatttgataaagtcacataattcagtgtaattataagtgtc 14126118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 185
Target Start/End: Complemental strand, 16402278 - 16402211
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcgtatcgg 185  Q
    |||| |||||||||||||||||||| ||||||| |||| ||  ||||||||||||  |||||| ||||    
T  16402278 gacatgccgacacggataataatttgagaaaataacatgatacagtgtaattatagctgtcgtgtcgg 16402211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 134 - 177
Target Start/End: Complemental strand, 27706228 - 27706185
Alignment:
Q  134 taataatttaagaaaattacataatttagtgtaattataagtgt 177  Q
    ||||||||||| ||||| ||||||||||||||||||| ||||||    
T  27706228 taataatttaaaaaaatcacataatttagtgtaattacaagtgt 27706185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 37203264 - 37203315
Alignment:
Q  126 gacacggataataatttaagaaaattacataatttagtgtaattataagtgt 177  Q
    ||||||| ||||||||| | ||||| ||||||||||||||||||| ||||||    
T  37203264 gacacggctaataatttgaaaaaatgacataatttagtgtaattacaagtgt 37203315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 117 - 168
Target Start/End: Complemental strand, 43300039 - 43299988
Alignment:
Q  117 cgacacgccgacacggataataatttaagaaaattacataatttagtgtaat 168  Q
    ||||| || ||||||||||||||||| |||||||||||||||| | ||||||    
T  43300039 cgacatgcagacacggataataatttgagaaaattacataattcaatgtaat 43299988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 168
Target Start/End: Original strand, 17446079 - 17446113
Alignment:
Q  134 taataatttaagaaaattacataatttagtgtaat 168  Q
    ||||||||||||||||| |||||||||||||||||    
T  17446079 taataatttaagaaaatcacataatttagtgtaat 17446113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 172
Target Start/End: Complemental strand, 21539918 - 21539880
Alignment:
Q  134 taataatttaagaaaattacataatttagtgtaattata 172  Q
    ||||||||||||||||| | |||||||||||||||||||    
T  21539918 taataatttaagaaaatcatataatttagtgtaattata 21539880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 30298938 - 30299000
Alignment:
Q  118 gacacgccgacacggataataattt-aagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||||||| | ||||||||| || ||||| |||||||| |||||||||| ||||||||    
T  30298938 gacacgccgacacagctaataatttgaaaaaaatgacataattcagtgtaattacaagtgtcg 30299000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 30327806 - 30327868
Alignment:
Q  118 gacacgccgacacggataataattt-aagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||||||| | ||||||||| || ||||| |||||||| |||||||||| ||||||||    
T  30327806 gacacgccgacacagctaataatttgaaaaaaatgacataattcagtgtaattacaagtgtcg 30327868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 168
Target Start/End: Original strand, 43300616 - 43300658
Alignment:
Q  126 gacacggataataatttaagaaaattacataatttagtgtaat 168  Q
    ||||||||||||||||| |||||||||||||||| | ||||||    
T  43300616 gacacggataataatttgagaaaattacataattcaatgtaat 43300658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 49431017 - 49431079
Alignment:
Q  118 gacacgccgacacggataataattt-aagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||||||| | ||||||||| || ||||| |||||||| |||||||||| ||||||||    
T  49431017 gacacgccgacacagctaataatttgaaaaaaatcacataattcagtgtaattaaaagtgtcg 49431079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 5775409 - 5775364
Alignment:
Q  134 taataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||| ||||||| |||||||| |||||||||||| ||||||    
T  5775409 taataatttgagaaaatcacataattaagtgtaattatatgtgtcg 5775364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 6485662 - 6485617
Alignment:
Q  134 taataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||| | ||||| ||||||||||||||||||| ||||||||    
T  6485662 taataatttgaaaaaatcacataatttagtgtaattacaagtgtcg 6485617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 16303333 - 16303272
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||||||  ||||||| ||| | ||||| | ||||||||||||||||| ||||||||    
T  16303333 gacacgccgacaaagataatattttgaaaaaatgatataatttagtgtaattacaagtgtcg 16303272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 198
Target Start/End: Complemental strand, 20521916 - 20521838
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcgtatcggtgtcggacaccga 198  Q
    |||||||||| || ||||||||||| | ||||| |||||||| | || ||| ||  ||||||| |||||||||||||||||    
T  20521916 gacacgccgataccgataataatttgataaaatcacataattcaatgaaatcat--gtgtcgtgtcggtgtcggacaccga 20521838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 23293053 - 23292992
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||||||| | ||||||||| | ||||| |||||||| ||| |||||| ||||||||    
T  23293053 gacacgccgacacagctaataatttgaaaaaatcacataattcagtataattacaagtgtcg 23292992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 175
Target Start/End: Original strand, 30838218 - 30838259
Alignment:
Q  134 taataatttaagaaaattacataatttagtgtaattataagt 175  Q
    ||||||||| | ||||||| ||||||||||||||||||||||    
T  30838218 taataatttgataaaattatataatttagtgtaattataagt 30838259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 35158052 - 35157991
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||||| |   |||||||||   ||||| ||||||||||||||||||||||||||||    
T  35158052 gacacgccgacgcaactaataatttggaaaaatcacataatttagtgtaattataagtgtcg 35157991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 170
Target Start/End: Original strand, 43506175 - 43506212
Alignment:
Q  133 ataataatttaagaaaattacataatttagtgtaatta 170  Q
    |||||||||||||||||||||||||||||  |||||||    
T  43506175 ataataatttaagaaaattacataatttaaagtaatta 43506212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 54580074 - 54580029
Alignment:
Q  134 taataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||| | ||||| |||||||| |||||||||||||||||||    
T  54580074 taataatttgaaaaaatcacataattcagtgtaattataagtgtcg 54580029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 179
Target Start/End: Original strand, 17344513 - 17344553
Alignment:
Q  139 atttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    |||||||||||| |||||||||| |||||||||| ||||||    
T  17344513 atttaagaaaatcacataatttaatgtaattatatgtgtcg 17344553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 180
Target Start/End: Complemental strand, 19230362 - 19230314
Alignment:
Q  132 gataataatttaagaaaattacataatttagtgtaattataagtgtcgt 180  Q
    ||||||||||| ||||||| |||||||| | |||||||||| |||||||    
T  19230362 gataataatttgagaaaataacataattcaatgtaattataggtgtcgt 19230314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 196
Target Start/End: Original strand, 20633508 - 20633552
Alignment:
Q  152 acataatttagtgtaattataagtgtcgtatcggtgtcggacacc 196  Q
    |||||||| | |||||||| ||||||||| |||||||||||||||    
T  20633508 acataattcaatgtaattacaagtgtcgtgtcggtgtcggacacc 20633552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 280
Target Start/End: Original strand, 31023072 - 31023136
Alignment:
Q  216 gtagctaattatttagatatttactaccattacacttcctagcacagtcatggtagcaaatctta 280  Q
    |||||||||||||   |||||||||||||||||| ||| ||||||| |  || ||||||||||||    
T  31023072 gtagctaattattataatatttactaccattacatttcttagcacaatagtgctagcaaatctta 31023136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 184
Target Start/End: Complemental strand, 46971960 - 46971900
Alignment:
Q  124 ccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcgtatcg 184  Q
    ||||||||||||||||||| ||| ||| ||||| |||| ||| || ||| |||||||||||    
T  46971960 ccgacacggataataatttgagataatgacatattttactgttatcataggtgtcgtatcg 46971900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 168
Target Start/End: Complemental strand, 47191054 - 47191010
Alignment:
Q  124 ccgacacggataataatttaagaaaattacataatttagtgtaat 168  Q
    |||||| ||||||||||||  |||||| |||||||||||||||||    
T  47191054 ccgacatggataataatttgcgaaaatgacataatttagtgtaat 47191010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 177
Target Start/End: Original strand, 51701248 - 51701309
Alignment:
Q  114 atacgacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgt 177  Q
    ||||||||||  ||||| | ||||||||| | |||||||||||||| |||||||||| ||||||    
T  51701248 atacgacacg--gacacagctaataatttgaaaaaattacataattgagtgtaattacaagtgt 51701309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 3e-23; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 117 - 204
Target Start/End: Complemental strand, 4017862 - 4017775
Alignment:
Q  117 cgacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcgtatcggtgtcggacaccgatgtgtg 204  Q
    |||||||||||||||||||||||||| ||||||  | ||||||||||||||| ||||||||||| | ||||||||||||||| |||||    
T  4017862 cgacacgccgacacggataataatttgagaaaacgatataatttagtgtaatcataagtgtcgtgttggtgtcggacaccgacgtgtg 4017775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 118 - 190
Target Start/End: Original strand, 43249985 - 43250057
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcgtatcggtgtcg 190  Q
    ||||||||||||||||||||||||| ||||||| |||||||  |||||||||||||||||||| |||||||||    
T  43249985 gacacgccgacacggataataatttgagaaaatgacataatacagtgtaattataagtgtcgtgtcggtgtcg 43250057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 116 - 204
Target Start/End: Complemental strand, 38804624 - 38804536
Alignment:
Q  116 acgacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcgtatcggtgtcggacaccgatgtgtg 204  Q
    ||||||||||||||||||||||||||| ||||||| |||||||  || ||||| ||| ||||||| | ||||||||||||||| |||||    
T  38804624 acgacacgccgacacggataataatttcagaaaatgacataatccagggtaatcataggtgtcgtgttggtgtcggacaccgacgtgtg 38804536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 231 - 291
Target Start/End: Complemental strand, 7467399 - 7467339
Alignment:
Q  231 gatatttactaccattacacttcctagcacagtcatggtagcaaatcttatatattcttgt 291  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||| |||| |||||||    
T  7467399 gatatttactaccattacatttcctagcacaatcatggtagcaaatctgatattttcttgt 7467339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 134 - 177
Target Start/End: Original strand, 8160424 - 8160467
Alignment:
Q  134 taataatttaagaaaattacataatttagtgtaattataagtgt 177  Q
    ||||||||||||||||||||||||||||||||||||||| ||||    
T  8160424 taataatttaagaaaattacataatttagtgtaattatatgtgt 8160467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 121 - 180
Target Start/End: Original strand, 13770686 - 13770745
Alignment:
Q  121 acgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcgt 180  Q
    |||||||||| | ||||||||||| |||||||||||||| |||||||||| |||||||||    
T  13770686 acgccgacacagctaataatttaaaaaaattacataattcagtgtaattacaagtgtcgt 13770745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 125 - 200
Target Start/End: Original strand, 23930218 - 23930293
Alignment:
Q  125 cgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcgtatcggtgtcggacaccgatg 200  Q
    ||||||||||| |||||| ||||||| |||||||| |||||||| ||| |||| || ||||||||||| |||||||    
T  23930218 cgacacggatagtaatttgagaaaatgacataattcagtgtaatcataggtgttgtgtcggtgtcggataccgatg 23930293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 118 - 172
Target Start/End: Complemental strand, 3554573 - 3554519
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattata 172  Q
    |||||||||||||  || |||||||||||||||||||||||||| ||||||||||    
T  3554573 gacacgccgacaccaatgataatttaagaaaattacataatttaatgtaattata 3554519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 118 - 172
Target Start/End: Original strand, 5235978 - 5236032
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattata 172  Q
    |||||| |||||| | ||||||||||||||||||| |||||||||||||||||||    
T  5235978 gacacgtcgacaccgctaataatttaagaaaattatataatttagtgtaattata 5236032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 12278836 - 12278894
Alignment:
Q  127 acacggataataatttaagaaaattacataatttagtgtaattataagtgtcgtatcgg 185  Q
    |||| ||||||||||||||||||| |||||||| |||||||||||| ||||||| ||||    
T  12278836 acactgataataatttaagaaaatgacataattcagtgtaattatatgtgtcgtgtcgg 12278894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 15680801 - 15680862
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||||||  | |||||||| || ||||| ||||||||||||||||||||||||||||    
T  15680801 gacacgccgacatagctaataattaaaaaaaatcacataatttagtgtaattataagtgtcg 15680862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 117 - 198
Target Start/End: Complemental strand, 17780152 - 17780071
Alignment:
Q  117 cgacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcgtatcggtgtcggacaccga 198  Q
    ||||| || |||| |||||||||||||||||||| ||||||||   |||||| ||| ||||||| ||||||||| |||||||    
T  17780152 cgacatgctgacatggataataatttaagaaaatgacataattctatgtaataataggtgtcgtgtcggtgtcgaacaccga 17780071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 27732290 - 27732245
Alignment:
Q  134 taataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||    
T  27732290 taataatttaagaaaattacataattcagtgtaattatatgtgtcg 27732245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 27945033 - 27945094
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    |||||||||||||   ||||||||| |||||||||||||||| |||||||||| ||||||||    
T  27945033 gacacgccgacaccactaataatttgagaaaattacataattcagtgtaattacaagtgtcg 27945094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 27093474 - 27093426
Alignment:
Q  124 ccgacacggataataatttaagaaaattacataatttagtgtaattata 172  Q
    ||||||| | ||||||||||||||||| |||||||||||||||||||||    
T  27093474 ccgacaccgctaataatttaagaaaatcacataatttagtgtaattata 27093426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 27184827 - 27184875
Alignment:
Q  124 ccgacacggataataatttaagaaaattacataatttagtgtaattata 172  Q
    ||||||| | ||||||||||||||||| |||||||||||||||||||||    
T  27184827 ccgacaccgctaataatttaagaaaatcacataatttagtgtaattata 27184875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 119 - 179
Target Start/End: Original strand, 28155563 - 28155623
Alignment:
Q  119 acacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    |||||||||||| | ||||||||| ||||||||||||||||  ||||||||| ||||||||    
T  28155563 acacgccgacaccgctaataatttgagaaaattacataattcggtgtaattacaagtgtcg 28155623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 124 - 191
Target Start/End: Complemental strand, 29812725 - 29812658
Alignment:
Q  124 ccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcgtatcggtgtcgg 191  Q
    ||||| || |||||||||| ||||||| | ||||||||||||||| ||| ||||||| ||||||||||    
T  29812725 ccgacccgtataataatttgagaaaatgatataatttagtgtaatcataggtgtcgtgtcggtgtcgg 29812658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 198
Target Start/End: Complemental strand, 7133339 - 7133265
Alignment:
Q  124 ccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcgtatcggtgtcggacaccga 198  Q
    ||||||| ||| ||||||| ||||||| |||||||| |||||||| ||| |||  || |||||||||||||||||    
T  7133339 ccgacacagatgataatttgagaaaatgacataattcagtgtaatcataggtggtgtgtcggtgtcggacaccga 7133265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 1433446 - 1433507
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||||||| | ||||||||| ||||||| |||| |||| ||||||||||| ||||||    
T  1433446 gacacgccgacaccgttaataatttgagaaaatcacatcatttggtgtaattatatgtgtcg 1433507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 2948675 - 2948736
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||||||| | | ||||||| ||||||| || |||||||||||||||||| ||||||    
T  2948675 gacacgccgacaccgctgataattttagaaaatcacgtaatttagtgtaattatatgtgtcg 2948736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 200
Target Start/End: Original strand, 5938477 - 5938546
Alignment:
Q  131 ggataataatttaagaaaattacataatttagtgtaattataagtgtcgtatcggtgtcggacaccgatg 200  Q
    |||||||||||| | ||||| |||||||| ||| |||||||| |||| || |||||||| ||||||||||    
T  5938477 ggataataatttgataaaataacataattcagtataattataggtgttgtgtcggtgtcagacaccgatg 5938546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 7328742 - 7328697
Alignment:
Q  134 taataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||| ||||||| ||||||||||||||||||||| ||||||    
T  7328742 taataatttgagaaaataacataatttagtgtaattatatgtgtcg 7328697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 15902814 - 15902875
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    |||| ||||||||  |||||||||| | ||||| ||||||||||||||||||||| ||||||    
T  15902814 gacatgccgacaccaataataatttgataaaatcacataatttagtgtaattatatgtgtcg 15902875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 21880160 - 21880205
Alignment:
Q  134 taataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||| |||||||||||||||| |||||||||| ||||||||    
T  21880160 taataatttgagaaaattacataattcagtgtaattacaagtgtcg 21880205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 22484017 - 22484078
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||||||| | ||||||||| |||||||| ||||||| ||| |||||||| ||||||    
T  22484017 gacacgccgacaccgctaataattttagaaaattgcataattcagtataattatatgtgtcg 22484078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 24339634 - 24339695
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||||||| | ||||||||| | ||||| |||||||| |||||||||| ||||||||    
T  24339634 gacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 24339695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 178
Target Start/End: Complemental strand, 18013125 - 18013081
Alignment:
Q  134 taataatttaagaaaattacataatttagtgtaattataagtgtc 178  Q
    ||||||||||| |||||||||||||| |||||||||||| |||||    
T  18013125 taataatttaaaaaaattacataattcagtgtaattatatgtgtc 18013081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 185
Target Start/End: Original strand, 23751899 - 23751959
Alignment:
Q  125 cgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcgtatcgg 185  Q
    |||||||||||||||||| | ||||| | ||||||||||||||| ||| ||||||| ||||    
T  23751899 cgacacggataataatttgataaaatgatataatttagtgtaatcataggtgtcgtgtcgg 23751959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 171
Target Start/End: Complemental strand, 29787435 - 29787383
Alignment:
Q  119 acacgccgacacggataataatttaagaaaattacataatttagtgtaattat 171  Q
    |||||||||||| | ||||||||| ||||||| |||||||| |||||||||||    
T  29787435 acacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattat 29787383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 178
Target Start/End: Original strand, 32308112 - 32308172
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtc 178  Q
    ||||||||||||| | ||||||||| ||||||| |||||||| ||||||||| || |||||    
T  32308112 gacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattgtatgtgtc 32308172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 177
Target Start/End: Original strand, 5233621 - 5233680
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgt 177  Q
    ||||| |||| |||| ||||||||| ||||||| ||||||| ||||||||||||| ||||    
T  5233621 gacacaccgatacggttaataatttgagaaaatcacataatctagtgtaattatatgtgt 5233680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 177
Target Start/End: Original strand, 25481894 - 25481953
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgt 177  Q
    ||||||||||||| | ||||||||| | ||||| |||||||| |||||||||| ||||||    
T  25481894 gacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgt 25481953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 172
Target Start/End: Original strand, 16341496 - 16341542
Alignment:
Q  126 gacacggataataatttaagaaaattacataatttagtgtaattata 172  Q
    ||||| ||||||||||| ||||||| |||||||| ||||||||||||    
T  16341496 gacactgataataatttgagaaaatcacataattaagtgtaattata 16341542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 168
Target Start/End: Complemental strand, 21568689 - 21568639
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaat 168  Q
    ||||||| ||||||| |||||||||||||||||  ||||||| ||||||||    
T  21568689 gacacgctgacacggctaataatttaagaaaatctcataattaagtgtaat 21568639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 3721101 - 3721146
Alignment:
Q  134 taataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||| ||||||| |||||||||||| |||||||| ||||||    
T  3721101 taataatttgagaaaatcacataatttagtataattatatgtgtcg 3721146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 9408385 - 9408340
Alignment:
Q  134 taataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||| | ||||| ||||||||||||||||||| ||||||||    
T  9408385 taataatttgaaaaaatcacataatttagtgtaattacaagtgtcg 9408340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 11061143 - 11061082
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||| ||||||| | ||||||||| | ||||| |||||||||||| |||||| ||||||||    
T  11061143 gacacaccgacacagctaataatttgaaaaaatcacataatttagtataattacaagtgtcg 11061082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 19992009 - 19992054
Alignment:
Q  134 taataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||| ||||||| ||||| || |||||||||||||||||||    
T  19992009 taataatttgagaaaatcacatatttcagtgtaattataagtgtcg 19992054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 20549783 - 20549844
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||| ||||||| | ||||||||| ||||||| || ||||| |||||||||||| ||||||    
T  20549783 gacacaccgacaccgctaataatttgagaaaatcacgtaattcagtgtaattatatgtgtcg 20549844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 22602777 - 22602716
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||||||| |  ||| |||| ||||||| |||||||| |||||||||||| ||||||    
T  22602777 gacacgccgacaccgtaaattatttgagaaaatcacataattcagtgtaattatatgtgtcg 22602716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 24105670 - 24105731
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||||||| | ||||||||| | |||||| ||| ||| |||||||||| ||||||||    
T  24105670 gacacgccgacacagctaataatttgaaaaaattgcatgattcagtgtaattacaagtgtcg 24105731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 178
Target Start/End: Complemental strand, 25239763 - 25239710
Alignment:
Q  125 cgacacggataataatttaagaaaattacataatttagtgtaattataagtgtc 178  Q
    |||||||||||||||||| ||||||||  |||| | |||||||||||| |||||    
T  25239763 cgacacggataataatttgagaaaattttataactcagtgtaattataggtgtc 25239710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 174
Target Start/End: Complemental strand, 8056995 - 8056956
Alignment:
Q  134 taataatttaagaaaattacataatttagtgtaattataag 174  Q
    ||||||||||| |||||||||||||| ||||||||||||||    
T  8056995 taataatttaa-aaaattacataattcagtgtaattataag 8056956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 196
Target Start/End: Complemental strand, 10230126 - 10230062
Alignment:
Q  132 gataataatttaagaaaattacataatttagtgtaattataagtgtcgtatcggtgtcggacacc 196  Q
    ||||||||||| || |||| |||||||| ||||||| ||||  |||||| | |||||||||||||    
T  10230126 gataataatttgaggaaatgacataattcagtgtaagtatagatgtcgtgttggtgtcggacacc 10230062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 17851439 - 17851483
Alignment:
Q  134 taataatttaagaaaattacataatttagtgtaattataagtgtc 178  Q
    ||||||||| ||||||| |||||||| |||||||||||| |||||    
T  17851439 taataattttagaaaatcacataattcagtgtaattatatgtgtc 17851483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 18233656 - 18233604
Alignment:
Q  127 acacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    |||| |||| |||||| ||||||| |||||||| |||||||||||| ||||||    
T  18233656 acacagatagtaatttgagaaaatgacataattcagtgtaattataggtgtcg 18233604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 179
Target Start/End: Original strand, 19206043 - 19206103
Alignment:
Q  119 acacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    |||||||||||| | ||||||||| ||||||| |||||||| | | |||||||| ||||||    
T  19206043 acacgccgacaccgctaataatttgagaaaatcacataattcattataattatatgtgtcg 19206103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 293
Target Start/End: Original strand, 21145908 - 21145984
Alignment:
Q  217 tagctaattatttagatatttactaccattacacttcctagcacagtcatggtagcaaatcttatatattcttgttg 293  Q
    ||||||||||| | |||||| ||| |||||| | || |||||||| ||||||||| |||||||| || || ||||||    
T  21145908 tagctaattatgttgatattcactcccattaaattttctagcacactcatggtagaaaatcttaaatttttttgttg 21145984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 178
Target Start/End: Original strand, 22868034 - 22868094
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtc 178  Q
    |||||||||||||   ||||||| | ||||||| |||||||| |||||||||||| |||||    
T  22868034 gacacgccgacaccactaataatatgagaaaatcacataattcagtgtaattatatgtgtc 22868094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 170
Target Start/End: Original strand, 30813820 - 30813856
Alignment:
Q  134 taataatttaagaaaattacataatttagtgtaatta 170  Q
    ||||||||| |||||||||||||||| ||||||||||    
T  30813820 taataatttgagaaaattacataattcagtgtaatta 30813856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 3e-23; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 116 - 195
Target Start/End: Original strand, 19573968 - 19574047
Alignment:
Q  116 acgacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcgtatcggtgtcggacac 195  Q
    ||||||||||||||| ||||||||||||||||||| |||||||| |||||||||||| ||| ||| ||||||||||||||    
T  19573968 acgacacgccgacaccgataataatttaagaaaataacataattcagtgtaattataggtggcgtgtcggtgtcggacac 19574047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 211 - 283
Target Start/End: Complemental strand, 9758200 - 9758128
Alignment:
Q  211 aaatagtagctaattatttagatatttactaccattacacttcctagcacagtcatggtagcaaatcttatat 283  Q
    |||| |||||||||||||| ||||| ||||||||||| |  |||||||| |||||||||| ||||||||||||    
T  9758200 aaatggtagctaattattttgatatctactaccattatatctcctagcagagtcatggtaccaaatcttatat 9758128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 121 - 180
Target Start/End: Complemental strand, 10535823 - 10535764
Alignment:
Q  121 acgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcgt 180  Q
    |||||||||| ||||||||||| ||||||| |||||||| |||||||| |||||||||||    
T  10535823 acgccgacaccgataataatttgagaaaatgacataattcagtgtaatcataagtgtcgt 10535764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 117 - 191
Target Start/End: Complemental strand, 23354720 - 23354646
Alignment:
Q  117 cgacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcgtatcggtgtcgg 191  Q
    ||||| || ||||| ||||||||||| ||||||| | ||||||||||||||| ||| ||||||| ||||||||||    
T  23354720 cgacatgctgacacagataataatttgagaaaatgatataatttagtgtaatcataggtgtcgtgtcggtgtcgg 23354646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 168
Target Start/End: Original strand, 22084997 - 22085046
Alignment:
Q  119 acacgccgacacggataataatttaagaaaattacataatttagtgtaat 168  Q
    |||||| |||||| |||||||||||||||||| |||||||||||||||||    
T  22084997 acacgctgacacgtataataatttaagaaaatgacataatttagtgtaat 22085046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 30404917 - 30404856
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||||||||| ||||||||| | ||||| |||||||| |||||||||| ||||||||    
T  30404917 gacacgccgacacggttaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 30404856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 42832343 - 42832282
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||| ||||||| | ||||||||| ||||||||||||| || |||||||||||||||||||    
T  42832343 gacacaccgacaccgctaataatttgagaaaattacatatttcagtgtaattataagtgtcg 42832282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 121 - 189
Target Start/End: Original strand, 24011031 - 24011099
Alignment:
Q  121 acgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcgtatcggtgtc 189  Q
    |||||||||  ||||||||||| ||||||| ||||||||||||||||| ||| ||||||  ||||||||    
T  24011031 acgccgacattgataataatttgagaaaatgacataatttagtgtaatcataggtgtcgcgtcggtgtc 24011099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 178
Target Start/End: Complemental strand, 21374765 - 21374706
Alignment:
Q  119 acacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtc 178  Q
    |||||||||||| | ||||||||| | |||||||||||||| |||||||||| |||||||    
T  21374765 acacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgtc 21374706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 177
Target Start/End: Original strand, 21616754 - 21616813
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgt 177  Q
    ||||||||||||| | ||||||||| ||||||| |||||||| |||||||||||| ||||    
T  21616754 gacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgt 21616813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 216 - 291
Target Start/End: Complemental strand, 44255361 - 44255286
Alignment:
Q  216 gtagctaattatttagatatttactaccattacacttcctagcacagtcatggtagcaaatcttatatattcttgt 291  Q
    |||| ||||||||| ||||||||||||||||  | ||  ||||||||| |||||||||||||||| || |||||||    
T  44255361 gtagttaattattttgatatttactaccattttattttgtagcacagttatggtagcaaatcttagattttcttgt 44255286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 118 - 188
Target Start/End: Complemental strand, 5891845 - 5891776
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcgtatcggtgt 188  Q
    ||||| ||||||| | ||||||||| | ||||||||||||||  ||||||||||||||||||| |||||||    
T  5891845 gacacaccgacacagttaataatttta-aaaattacataattatgtgtaattataagtgtcgtgtcggtgt 5891776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 6940247 - 6940308
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||||||| | ||||||||| | ||| |||||||||| |||||||||| ||||||||    
T  6940247 gacacgccgacacagctaataattttaaaaagttacataattaagtgtaattacaagtgtcg 6940308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 126 - 179
Target Start/End: Complemental strand, 18256039 - 18255986
Alignment:
Q  126 gacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||| ||||||||||||| ||||| |||||||||| |||||||| ||||||||    
T  18256039 gacacagataataatttaaaaaaatcacataatttaatgtaattagaagtgtcg 18255986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 171
Target Start/End: Complemental strand, 21782885 - 21782832
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattat 171  Q
    ||||||||||||| | ||||||||| ||||||| |||||||| |||||||||||    
T  21782885 gacacgccgacactgctaataatttgagaaaatcacataattcagtgtaattat 21782832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 31018582 - 31018643
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    |||||||| |||| | ||||||||| ||||||| |||| |||||||||||||||| ||||||    
T  31018582 gacacgccaacaccgctaataatttcagaaaatcacatgatttagtgtaattataggtgtcg 31018643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 178
Target Start/End: Original strand, 21091715 - 21091775
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtc 178  Q
    ||||| ||||||| | ||||||||||||||||| ||||| || |||||||||| |||||||    
T  21091715 gacacaccgacaccgctaataatttaagaaaataacatacttcagtgtaattacaagtgtc 21091775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 189
Target Start/End: Original strand, 30563408 - 30563472
Alignment:
Q  125 cgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcgtatcggtgtc 189  Q
    |||||||||||||||||| ||||||| |||||||| | ||||| |||| |||| || ||||||||    
T  30563408 cgacacggataataatttgagaaaatgacataattcaatgtaactataggtgttgtgtcggtgtc 30563472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 178
Target Start/End: Original strand, 31808069 - 31808129
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtc 178  Q
    ||||| ||||||| | ||||||||||| ||||| |||||||| |||||||||||| |||||    
T  31808069 gacacaccgacaccgctaataatttaacaaaatcacataattcagtgtaattatatgtgtc 31808129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 198
Target Start/End: Original strand, 37986771 - 37986851
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcgtatcggtgtcggacaccga 198  Q
    ||||||||||||| ||||||||||| | ||||| | ||| || |||||||| ||| || |||| | |||||||||||||||    
T  37986771 gacacgccgacacagataataatttgaaaaaatgatatatttgagtgtaatcataggtatcgtgttggtgtcggacaccga 37986851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 134 - 173
Target Start/End: Original strand, 23921261 - 23921300
Alignment:
Q  134 taataatttaagaaaattacataatttagtgtaattataa 173  Q
    ||||||||| |||||||||||||||| |||||||||||||    
T  23921261 taataatttgagaaaattacataattcagtgtaattataa 23921300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 177
Target Start/End: Original strand, 24894381 - 24894440
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgt 177  Q
    ||||||||||||| | ||||||||||| ||||| |||||||| |||| ||||| ||||||    
T  24894381 gacacgccgacacagctaataatttaaaaaaatcacataattcagtgcaattaaaagtgt 24894440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 117 - 168
Target Start/End: Complemental strand, 30298515 - 30298464
Alignment:
Q  117 cgacacgccgacacggataataatttaagaaaattacataatttagtgtaat 168  Q
    ||||||| |||||| ||||||||||||| ||||| |||||||| ||||||||    
T  30298515 cgacacgtcgacaccgataataatttaataaaatgacataattcagtgtaat 30298464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 172
Target Start/End: Complemental strand, 2665939 - 2665901
Alignment:
Q  134 taataatttaagaaaattacataatttagtgtaattata 172  Q
    ||||||||| ||||||| |||||||||||||||||||||    
T  2665939 taataattttagaaaatcacataatttagtgtaattata 2665901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 191
Target Start/End: Complemental strand, 23355063 - 23354989
Alignment:
Q  117 cgacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcgtatcggtgtcgg 191  Q
    ||||| || ||||| ||||||||||| ||||||| | ||||||||||| ||| ||| ||||| | ||||||||||    
T  23355063 cgacatgctgacacagataataatttgagaaaatgatataatttagtgcaatcataggtgtcatgtcggtgtcgg 23354989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 172
Target Start/End: Complemental strand, 40361805 - 40361767
Alignment:
Q  134 taataatttaagaaaattacataatttagtgtaattata 172  Q
    ||||||||| | |||||||||||||||||||||||||||    
T  40361805 taataatttgaaaaaattacataatttagtgtaattata 40361767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 195
Target Start/End: Complemental strand, 1239711 - 1239650
Alignment:
Q  134 taataatttaagaaaattacataatttagtgtaattataagtgtcgtatcggtgtcggacac 195  Q
    ||||||||||||||||| | |||||   ||||||||||| ||||||| |||||||| |||||    
T  1239711 taataatttaagaaaatcatataatcatgtgtaattatatgtgtcgtgtcggtgtccgacac 1239650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 12668474 - 12668429
Alignment:
Q  134 taataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||| | ||||| |||||||| |||||||||||||||||||    
T  12668474 taataatttgaaaaaatgacataattcagtgtaattataagtgtcg 12668429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 15972865 - 15972926
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    |||||||||||||   ||||||||| | ||||||||| |||| |||||||||| ||||||||    
T  15972865 gacacgccgacacaattaataatttgaaaaaattacacaattcagtgtaattacaagtgtcg 15972926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 171
Target Start/End: Complemental strand, 16069321 - 16069268
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattat 171  Q
    ||||||||||||| | ||||||||||| ||||| | |||||| |||||||||||    
T  16069321 gacacgccgacaccgttaataatttaaaaaaatcatataattcagtgtaattat 16069268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 18420501 - 18420440
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    |||||||| |||| | ||||||||| ||||||| |||||||| | || ||||||||||||||    
T  18420501 gacacgccaacactgctaataatttgagaaaatcacataattcaatgcaattataagtgtcg 18420440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 18421955 - 18422016
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    |||||||||||||   ||||||||||| || || |||||||| |||||||||| ||||||||    
T  18421955 gacacgccgacacaattaataatttaaaaatatcacataattcagtgtaattacaagtgtcg 18422016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 18841064 - 18841019
Alignment:
Q  134 taataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||| | |||||||||||||| |||||||||| ||||||||    
T  18841064 taataatttgaaaaaattacataattaagtgtaattacaagtgtcg 18841019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 20539741 - 20539680
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    |||||| |||||| | ||||||||| | ||||| | ||||||||||||||||| ||||||||    
T  20539741 gacacgtcgacacagctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcg 20539680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 23718018 - 23718079
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||| ||||||| | ||||||||| ||||| | |||||||| |||||||||||| ||||||    
T  23718018 gacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtcg 23718079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 24105690 - 24105751
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||| ||||||| | ||||||||| ||||| | |||||||| |||||||||||| ||||||    
T  24105690 gacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtcg 24105751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 30527646 - 30527601
Alignment:
Q  134 taataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||| ||||||| | ||||||||||||||||||| ||||||    
T  30527646 taataatttgagaaaatcatataatttagtgtaattatatgtgtcg 30527601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 175
Target Start/End: Complemental strand, 31456692 - 31456651
Alignment:
Q  134 taataatttaagaaaattacataatttagtgtaattataagt 175  Q
    |||||||||||||||||||  ||||| |||||||||||||||    
T  31456692 taataatttaagaaaattatgtaattcagtgtaattataagt 31456651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 178
Target Start/End: Original strand, 39323263 - 39323316
Alignment:
Q  125 cgacacggataataatttaagaaaattacataatttagtgtaattataagtgtc 178  Q
    |||||| | ||||||||| | |||||||||||||| |||||||||| |||||||    
T  39323263 cgacaccgctaataatttgacaaaattacataattcagtgtaattacaagtgtc 39323316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 170
Target Start/End: Complemental strand, 1374656 - 1374620
Alignment:
Q  134 taataatttaagaaaattacataatttagtgtaatta 170  Q
    ||||||||||| | |||||||||||||||||||||||    
T  1374656 taataatttaaaagaattacataatttagtgtaatta 1374620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 251 - 291
Target Start/End: Original strand, 20116504 - 20116544
Alignment:
Q  251 ttcctagcacagtcatggtagcaaatcttatatattcttgt 291  Q
    ||||||||||| |||||||| |||||||||||| |||||||    
T  20116504 ttcctagcacaatcatggtaccaaatcttatattttcttgt 20116544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 2e-21; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 118 - 190
Target Start/End: Original strand, 44067508 - 44067580
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcgtatcggtgtcg 190  Q
    ||||||||||||||||||||||||| ||||||| |||||||  |||||||||||||||||||| |||||||||    
T  44067508 gacacgccgacacggataataatttgagaaaatgacataatacagtgtaattataagtgtcgtgtcggtgtcg 44067580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 118 - 195
Target Start/End: Complemental strand, 26915307 - 26915230
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcgtatcggtgtcggacac 195  Q
    |||||| |||||||||||| | ||| ||||||| |||||||||| |||||| | ||||||||| ||||||||||||||    
T  26915307 gacacgtcgacacggataaaattttgagaaaatgacataatttaatgtaatcacaagtgtcgtgtcggtgtcggacac 26915230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 124 - 188
Target Start/End: Complemental strand, 13009554 - 13009490
Alignment:
Q  124 ccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcgtatcggtgt 188  Q
    ||||||||||||||||||| ||||||  | ||||||||||||||| ||||||||||| |||||||    
T  13009554 ccgacacggataataatttgagaaaacaatataatttagtgtaatcataagtgtcgtgtcggtgt 13009490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 172
Target Start/End: Complemental strand, 39954347 - 39954292
Alignment:
Q  117 cgacacgccgacacggataataatttaagaaaattacataatttagtgtaattata 172  Q
    |||||||||||||| | ||||||||| ||||||| |||||||||||||||||||||    
T  39954347 cgacacgccgacaccgctaataatttgagaaaatcacataatttagtgtaattata 39954292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 4786405 - 4786344
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    |||||||||||||   ||||||||||||||||| |||||||| |||||||||||| ||||||    
T  4786405 gacacgccgacaccattaataatttaagaaaatcacataattcagtgtaattatatgtgtcg 4786344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 13844663 - 13844602
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||||||| | ||||||||| ||||||| |||||||| |||||||||||| ||||||    
T  13844663 gacacgccgacactgctaataatttgagaaaatcacataattgagtgtaattatatgtgtcg 13844602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 15816196 - 15816135
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    |||||||||||||   ||||||||| | ||||| ||||||||||||||||||||||||||||    
T  15816196 gacacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattataagtgtcg 15816135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 20873061 - 20873122
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||||||  ||||||||||| | ||||| ||||||||||||||||||| ||||||||    
T  20873061 gacacgccgacatagataataatttgaaaaaatcacataatttagtgtaattacaagtgtcg 20873122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 177
Target Start/End: Original strand, 22595986 - 22596045
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgt 177  Q
    ||||||||||||| | ||||||||||| ||||| |||||||| |||||||||| ||||||    
T  22595986 gacacgccgacacagctaataatttaaaaaaataacataattcagtgtaattacaagtgt 22596045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 178
Target Start/End: Complemental strand, 24362270 - 24362209
Alignment:
Q  117 cgacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtc 178  Q
    |||||||||||||| | ||||||||| ||| ||| |||||||| |||||||||||| |||||    
T  24362270 cgacacgccgacaccgctaataatttgagagaatcacataattcagtgtaattatatgtgtc 24362209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 24669425 - 24669486
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||| ||||| | ||||||||| || ||||||||||||| |||||||||| ||||||||    
T  24669425 gacacgctgacaccgttaataatttgaggaaattacataattcagtgtaattacaagtgtcg 24669486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 27213539 - 27213600
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||||||| | ||||||||| ||||||| |||||||| | |||||||||| ||||||    
T  27213539 gacacgccgacactgctaataatttcagaaaatcacataattcactgtaattatatgtgtcg 27213600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 31236644 - 31236583
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||||||| | ||||||||| ||||||| |||||||| | |||||||||| ||||||    
T  31236644 gacacgccgacactgctaataatttgagaaaatcacataattcaatgtaattatatgtgtcg 31236583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 31580178 - 31580133
Alignment:
Q  134 taataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||||||||||| |||||||| |||||||||||| ||||||    
T  31580178 taataatttaagaaaatcacataattgagtgtaattataggtgtcg 31580133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 34897077 - 34897138
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    |||||| |||||| | ||||||||| ||||||| |||||||| |||||||||||| ||||||    
T  34897077 gacacgtcgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcg 34897138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 124 - 185
Target Start/End: Complemental strand, 35431201 - 35431140
Alignment:
Q  124 ccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcgtatcgg 185  Q
    |||| |||||||||||||| ||||||| ||||| ||||||||||| ||| ||||||| ||||    
T  35431201 ccgaaacggataataatttgagaaaatgacatattttagtgtaatcataggtgtcgtgtcgg 35431140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 195
Target Start/End: Complemental strand, 41832007 - 41831930
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcgtatcggtgtcggacac 195  Q
    |||| |||||||| | ||||||||| | ||||| |||||||| ||||||| || ||||||||| | ||||||||||||    
T  41832007 gacatgccgacacagttaataatttgaaaaaatcacataattcagtgtaactacaagtgtcgtgttggtgtcggacac 41831930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 185
Target Start/End: Original strand, 1676711 - 1676771
Alignment:
Q  125 cgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcgtatcgg 185  Q
    ||||||||||||||||||  |||||| ||||| ||||||||||| ||| ||||||| ||||    
T  1676711 cgacacggataataatttgtgaaaatgacatattttagtgtaatcataggtgtcgtgtcgg 1676771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 184
Target Start/End: Original strand, 2035737 - 2035797
Alignment:
Q  124 ccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcgtatcg 184  Q
    ||||||| ||||| |||||| |||||| |||| ||| |||||||||||| |||||||||||    
T  2035737 ccgacaccgataacaatttaggaaaataacattattcagtgtaattataggtgtcgtatcg 2035797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 179
Target Start/End: Complemental strand, 4298952 - 4298892
Alignment:
Q  119 acacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    |||||||||||| | ||||||||| | ||||| |||||||||| |||||||| ||||||||    
T  4298952 acacgccgacacagttaataatttgaaaaaatcacataatttaatgtaattacaagtgtcg 4298892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 185
Target Start/End: Complemental strand, 25887045 - 25886993
Alignment:
Q  134 taataattt-aagaaaattacataatttagtgtaattataagtgtcgtatcgg 185  Q
    ||||||||| || |||||||||||||||| |||||||||||||||||| ||||    
T  25887045 taataatttgaaaaaaattacataatttaatgtaattataagtgtcgtgtcgg 25886993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 33382077 - 33382025
Alignment:
Q  127 acacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    |||| ||||||||||||||||||| |||||||| || ||||||||| ||||||    
T  33382077 acaccgataataatttaagaaaatgacataattcagagtaattatatgtgtcg 33382025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 185
Target Start/End: Original strand, 39820420 - 39820488
Alignment:
Q  117 cgacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcgtatcgg 185  Q
    |||||||| ||| || |||||||||| ||||||| | ||||||||||||||| ||| ||||||| ||||    
T  39820420 cgacacgctgacccgtataataatttgagaaaatgatataatttagtgtaatcataggtgtcgtgtcgg 39820488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 121 - 172
Target Start/End: Original strand, 7658458 - 7658509
Alignment:
Q  121 acgccgacacggataataatttaagaaaattacataatttagtgtaattata 172  Q
    ||||||||||   ||||||||| |||||||||||||||| ||||||||||||    
T  7658458 acgccgacaccactaataatttgagaaaattacataattcagtgtaattata 7658509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 134 - 177
Target Start/End: Original strand, 11803267 - 11803310
Alignment:
Q  134 taataatttaagaaaattacataatttagtgtaattataagtgt 177  Q
    ||||||||||||||||| |||||||| |||||||||||| ||||    
T  11803267 taataatttaagaaaatcacataattcagtgtaattatatgtgt 11803310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 134 - 177
Target Start/End: Original strand, 14731720 - 14731763
Alignment:
Q  134 taataatttaagaaaattacataatttagtgtaattataagtgt 177  Q
    ||||||||| ||||||| ||||||||||||||||||||| ||||    
T  14731720 taataatttgagaaaatcacataatttagtgtaattatatgtgt 14731763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 193
Target Start/End: Complemental strand, 41838190 - 41838115
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcgtatcggtgtcggac 193  Q
    |||||| |||||| | ||||||||||| ||||| |||||||| |||| || || |||||| || ||||||||||||    
T  41838190 gacacgtcgacacagctaataatttaaaaaaatcacataattcagtgcaactacaagtgttgtgtcggtgtcggac 41838115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 179
Target Start/End: Complemental strand, 2572124 - 2572062
Alignment:
Q  117 cgacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||| ||||||   ||||||||| | ||||| ||||||||||||||||||| ||||||||    
T  2572124 cgacacgtcgacacacctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcg 2572062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 179
Target Start/End: Complemental strand, 11927150 - 11927092
Alignment:
Q  121 acgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    |||||||||| | ||||||||| | ||||| |||||||| |||||||||||| ||||||    
T  11927150 acgccgacactgttaataatttgataaaatcacataattcagtgtaattatatgtgtcg 11927092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 179
Target Start/End: Complemental strand, 12570576 - 12570514
Alignment:
Q  117 cgacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    |||||||  ||||| | ||||||||||||||||  |||||||| |||||||||||| ||||||    
T  12570576 cgacacgttgacactgctaataatttaagaaaaacacataattaagtgtaattatatgtgtcg 12570514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 172
Target Start/End: Original strand, 13203649 - 13203687
Alignment:
Q  134 taataatttaagaaaattacataatttagtgtaattata 172  Q
    ||||||||| |||||||||||||||| ||||||||||||    
T  13203649 taataatttgagaaaattacataattcagtgtaattata 13203687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 198
Target Start/End: Original strand, 14679325 - 14679404
Alignment:
Q  117 cgacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcgtatcggtgtcggacaccga 198  Q
    |||||| | ||||| ||||||||||||||||||| | |||| | ||||  || ||||||||||| |||||||| ||||||||    
T  14679325 cgacacactgacacagataataatttaagaaaataatataactcagtg--atcataagtgtcgtgtcggtgtctgacaccga 14679404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 195
Target Start/End: Original strand, 34222955 - 34223016
Alignment:
Q  134 taataatttaagaaaattacataatttagtgtaattataagtgtc-gtatcggtgtcggacac 195  Q
    ||||||||||| ||||| |||||||| |||||||||||| ||||| |||| ||||||||||||    
T  34222955 taataatttaataaaatcacataattaagtgtaattatatgtgtcggtat-ggtgtcggacac 34223016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 8342980 - 8343025
Alignment:
Q  134 taataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||| | ||||| ||||||||||||||||||| ||||||||    
T  8342980 taataatttgaaaaaatcacataatttagtgtaattacaagtgtcg 8343025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 178
Target Start/End: Original strand, 8343307 - 8343368
Alignment:
Q  117 cgacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtc 178  Q
    |||||| ||||||  | ||||||||| | ||||| ||||||||||||||||||| |||||||    
T  8343307 cgacacaccgacatagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtc 8343368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 20679446 - 20679401
Alignment:
Q  134 taataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||| ||||||| ||||| || |||||||||||||||||||    
T  20679446 taataatttgagaaaatcacatagttcagtgtaattataagtgtcg 20679401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 25192414 - 25192353
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||||||| | ||||||||| | ||| | |||||||| ||| |||||||||||||||    
T  25192414 gacacgccgacacagctaataatttgaaaaagtgacataattcagtataattataagtgtcg 25192353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 33405435 - 33405390
Alignment:
Q  134 taataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||| ||||||  ||||||||||||||||||||| ||||||    
T  33405435 taataatttgagaaaaacacataatttagtgtaattatatgtgtcg 33405390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 3025559 - 3025603
Alignment:
Q  134 taataatttaagaaaattacataatttagtgtaattataagtgtc 178  Q
    ||||||||| ||||||| |||||||| |||||||||||| |||||    
T  3025559 taataatttgagaaaatcacataattcagtgtaattataggtgtc 3025603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 191
Target Start/End: Original strand, 3911103 - 3911175
Alignment:
Q  119 acacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcgtatcggtgtcgg 191  Q
    |||||||||||   ||||| |||||| ||||| |||||||| |||| ||| ||||||||||| | ||||||||    
T  3911103 acacgccgacatcaataatcatttaataaaatcacataattcagtgaaatcataagtgtcgtgttggtgtcgg 3911175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 4611532 - 4611580
Alignment:
Q  124 ccgacacggataataatttaagaaaattacataatttagtgtaattata 172  Q
    ||||||| | ||||||||| ||||||| |||||||| ||||||||||||    
T  4611532 ccgacaccgctaataatttgagaaaataacataattcagtgtaattata 4611580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 10497883 - 10497823
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtc 178  Q
    ||||||||||||||||||| | ||| ||||||| |||||||||  |||||| | |||||||    
T  10497883 gacacgccgacacggataaaattttgagaaaataacataatttgatgtaatcacaagtgtc 10497823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 179
Target Start/End: Original strand, 11944658 - 11944718
Alignment:
Q  119 acacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    |||||||||||| | ||||||||| | ||||| |||||| | |||||||||||| ||||||    
T  11944658 acacgccgacactgttaataatttgataaaatcacataactcagtgtaattatatgtgtcg 11944718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 172
Target Start/End: Complemental strand, 14634206 - 14634154
Alignment:
Q  120 cacgccgacacggataataatttaagaaaattacataatttagtgtaattata 172  Q
    |||| |||||| | ||| ||||||||||||||| |||||| ||||||||||||    
T  14634206 cacgtcgacaccgctaacaatttaagaaaattatataattcagtgtaattata 14634154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 178
Target Start/End: Original strand, 27101507 - 27101566
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtc 178  Q
    ||||||||||||| | ||||||||| | ||||| ||||||||||||| ||||||| |||||    
T  27101507 gacacgccgacaccgctaataatttgaaaaaatcacataatttagtg-aattataggtgtc 27101566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 5e-19; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 126 - 198
Target Start/End: Complemental strand, 42005006 - 42004934
Alignment:
Q  126 gacacggataataatttaagaaaattacataatttagtgtaattataagtgtcgtatcggtgtcggacaccga 198  Q
    ||||||||||||||||| ||||||| ||||||||||||||||| ||| |||| || |||||||||||||||||    
T  42005006 gacacggataataatttgagaaaatgacataatttagtgtaatcataggtgttgtgtcggtgtcggacaccga 42004934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 124 - 199
Target Start/End: Complemental strand, 40747834 - 40747759
Alignment:
Q  124 ccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcgtatcggtgtcggacaccgat 199  Q
    ||||||||||||||||||| ||||||| |||||||| | |||||||||| ||||| | | ||||||||||||||||    
T  40747834 ccgacacggataataatttgagaaaatgacataattcaatgtaattataggtgtcatgttggtgtcggacaccgat 40747759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 121 - 179
Target Start/End: Complemental strand, 41877534 - 41877476
Alignment:
Q  121 acgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    |||||||||| | ||||||||| ||||||||||||||||||||||||||| ||||||||    
T  41877534 acgccgacaccgctaataatttgagaaaattacataatttagtgtaattacaagtgtcg 41877476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 119 - 179
Target Start/End: Complemental strand, 5376566 - 5376506
Alignment:
Q  119 acacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    |||||||||||| | ||||||||||||||||| |||||||| |||||||||| ||||||||    
T  5376566 acacgccgacaccgctaataatttaagaaaataacataattcagtgtaattaaaagtgtcg 5376506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 127 - 198
Target Start/End: Complemental strand, 6936458 - 6936387
Alignment:
Q  127 acacggataataatttaagaaaattacataatttagtgtaattataagtgtcgtatcggtgtcggacaccga 198  Q
    |||||||||||||| | ||||||| |||||||| |||||||| ||| ||||||| || ||||||||||||||    
T  6936458 acacggataataatctgagaaaatgacataattaagtgtaatcataggtgtcgtgtctgtgtcggacaccga 6936387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 36878453 - 36878514
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||||||| | ||||||||| ||||||| |||||||| |||||||||||| ||||||    
T  36878453 gacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattataggtgtcg 36878514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 124 - 188
Target Start/End: Complemental strand, 39101243 - 39101179
Alignment:
Q  124 ccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcgtatcggtgt 188  Q
    |||||||  |||||||||| ||||||| |||||||| |||||||||||| ||||||| |||||||    
T  39101243 ccgacacatataataatttgagaaaataacataattaagtgtaattataggtgtcgtttcggtgt 39101179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 118 - 180
Target Start/End: Complemental strand, 3490457 - 3490395
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcgt 180  Q
    ||||||||||||| | ||||||||| |||||| ||||| ||| |||||||||| |||||||||    
T  3490457 gacacgccgacactgctaataatttgagaaaactacattattcagtgtaattacaagtgtcgt 3490395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 172
Target Start/End: Complemental strand, 12713378 - 12713340
Alignment:
Q  134 taataatttaagaaaattacataatttagtgtaattata 172  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  12713378 taataatttaagaaaatcacataatttagtgtaattata 12713340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 172
Target Start/End: Complemental strand, 12717469 - 12717431
Alignment:
Q  134 taataatttaagaaaattacataatttagtgtaattata 172  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  12717469 taataatttaagaaaatcacataatttagtgtaattata 12717431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 177
Target Start/End: Original strand, 13436451 - 13436509
Alignment:
Q  119 acacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgt 177  Q
    |||||||||||| | |||||||||||| |||| |||||||| |||||||||||| ||||    
T  13436451 acacgccgacactgctaataatttaaggaaatcacataattcagtgtaattatatgtgt 13436509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 118 - 172
Target Start/End: Complemental strand, 34257977 - 34257923
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattata 172  Q
    |||||| |||||| | ||||||||||| ||||| |||||||||||||||||||||    
T  34257977 gacacgtcgacaccgttaataatttaataaaatcacataatttagtgtaattata 34257923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 179
Target Start/End: Complemental strand, 39953210 - 39953152
Alignment:
Q  121 acgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    |||||||||| | ||||||||| ||||||| |||||||||||||||||| || ||||||    
T  39953210 acgccgacaccgctaataattttagaaaatcacataatttagtgtaattgtatgtgtcg 39953152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 1486776 - 1486715
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||| ||||| | ||||||||| | ||||| |||||||| |||||||||||||||||||    
T  1486776 gacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaattataagtgtcg 1486715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 6612238 - 6612177
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    |||||||||| || | ||||||||| | |||||||||||||| |||||||||| ||||||||    
T  6612238 gacacgccgatacagttaataatttgaaaaaattacataattcagtgtaattacaagtgtcg 6612177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 13997875 - 13997936
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||||||| | |||| |||||| ||||| |||||||| |||||||||||| ||||||    
T  13997875 gacacgccgacaccgttaattatttaaaaaaatcacataattcagtgtaattatatgtgtcg 13997936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 19058923 - 19058862
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||||||| | ||||||||||| || || |||||||| |||||||||| ||||||||    
T  19058923 gacacgccgacacagctaataatttaaaaagataacataattcagtgtaattacaagtgtcg 19058862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 21530681 - 21530742
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||||||| | ||||||||| ||||||| | ||||||| || |||||||||||||||    
T  21530681 gacacgccgacaccgttaataatttgagaaaatcatataatttggtataattataagtgtcg 21530742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 22515954 - 22515893
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||| ||||| | ||||||||| | ||||| ||||||||||||||||||| ||||||||    
T  22515954 gacacgcagacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcg 22515893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 22881683 - 22881622
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    |||||||||||||   ||||||||| | ||||| ||||||||||||||||||| ||||||||    
T  22881683 gacacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattacaagtgtcg 22881622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 179
Target Start/End: Original strand, 25272494 - 25272535
Alignment:
Q  138 aatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||| ||||||| ||||||||||||||||||||||||||||    
T  25272494 aatttgagaaaatcacataatttagtgtaattataagtgtcg 25272535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 175
Target Start/End: Complemental strand, 37055907 - 37055866
Alignment:
Q  134 taataatttaagaaaattacataatttagtgtaattataagt 175  Q
    ||||||||| ||||||||||||||||||||||||||| ||||    
T  37055907 taataatttgagaaaattacataatttagtgtaattacaagt 37055866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 39130818 - 39130773
Alignment:
Q  134 taataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||| ||||||||| ||||||||||||||||||| ||||||    
T  39130818 taataattttagaaaattatataatttagtgtaattatatgtgtcg 39130773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 46348450 - 46348389
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||||||| | ||||||||| | ||||| | ||||||||||||||||| ||||||||    
T  46348450 gacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcg 46348389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 47989490 - 47989550
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    |||||||||||||  |||||||||||| ||||| |||||||| |||||||||| ||||||||    
T  47989490 gacacgccgacaca-ataataatttaaaaaaatcacataattcagtgtaattacaagtgtcg 47989550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 116 - 168
Target Start/End: Complemental strand, 48415795 - 48415742
Alignment:
Q  116 acgacacgccgacacggataataa-tttaagaaaattacataatttagtgtaat 168  Q
    |||||||||||||||||||||||| ||||| ||||| | |||||||||||||||    
T  48415795 acgacacgccgacacggataataattttaaaaaaatgatataatttagtgtaat 48415742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 48450654 - 48450593
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    |||||||| |||| | ||||||||| | ||||| ||||||||||||||||||| ||||||||    
T  48450654 gacacgccaacacagctaataatttgaaaaaataacataatttagtgtaattacaagtgtcg 48450593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 398832 - 398772
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtc 178  Q
    ||||||||||||| | ||||||||| | ||||| |||||||| |||||||||||| |||||    
T  398832 gacacgccgacaccgctaataatttgaaaaaatcacataattcagtgtaattataggtgtc 398772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 14359588 - 14359529
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtc 178  Q
    ||||||||||||| | ||||||||| | ||||| ||||||||||||||||||| |||||||    
T  14359588 gacacgccgacacagctaataatttga-aaaatcacataatttagtgtaattacaagtgtc 14359529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 195
Target Start/End: Original strand, 21038091 - 21038158
Alignment:
Q  134 taataatttaagaaaattacataatttagtgtaattata------agtgtcgtatcggtgtcggacac 195  Q
    |||||||||||||||||||||||||| |||||||| |||      |||||||| ||||||||||||||    
T  21038091 taataatttaagaaaattacataattcagtgtaatcatatgcgtcagtgtcgtgtcggtgtcggacac 21038158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 178
Target Start/End: Complemental strand, 34712434 - 34712390
Alignment:
Q  134 taataatttaagaaaattacataatttagtgtaattataagtgtc 178  Q
    ||||||||| ||||||| ||||||||||||||||||||| |||||    
T  34712434 taataatttgagaaaataacataatttagtgtaattatatgtgtc 34712390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 194
Target Start/End: Original strand, 49872845 - 49872905
Alignment:
Q  134 taataatttaagaaaattacataatttagtgtaattataagtgtcgtatcggtgtcggaca 194  Q
    |||| |||| |||||| || |||||| |||||||||||| |||||||||||||| ||||||    
T  49872845 taatcatttgagaaaactatataattcagtgtaattatatgtgtcgtatcggtgccggaca 49872905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 177
Target Start/End: Original strand, 113291 - 113350
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgt 177  Q
    ||||||||||||| | ||||||||| | ||||| |||||||| |||||||||| ||||||    
T  113291 gacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgt 113350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 124 - 179
Target Start/End: Complemental strand, 1864941 - 1864886
Alignment:
Q  124 ccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||| | ||||||||| ||||||| |||||||| |||||||||||| ||||||    
T  1864941 ccgacacagttaataatttgagaaaatcacataattcagtgtaattatatgtgtcg 1864886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 169
Target Start/End: Complemental strand, 12443527 - 12443476
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaatt 169  Q
    ||||||||||||| | ||||||||| ||||||| |||||||| |||||||||    
T  12443527 gacacgccgacacagctaataatttgagaaaatcacataattcagtgtaatt 12443476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 177
Target Start/End: Complemental strand, 7988517 - 7988459
Alignment:
Q  119 acacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgt 177  Q
    ||||| |||||| ||||||||||||||||| | |||||||| | |||||| ||||||||    
T  7988517 acacgtcgacactgataataatttaagaaagtgacataattcaatgtaatcataagtgt 7988459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 172
Target Start/End: Complemental strand, 14332693 - 14332655
Alignment:
Q  134 taataatttaagaaaattacataatttagtgtaattata 172  Q
    ||||||||| ||||||| |||||||||||||||||||||    
T  14332693 taataatttgagaaaatcacataatttagtgtaattata 14332655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 180
Target Start/End: Complemental strand, 17831598 - 17831536
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcgt 180  Q
    ||||||||||||| | ||||||||| ||||||| |||| ||| |||||||| ||| |||||||    
T  17831598 gacacgccgacaccgctaataatttgagaaaatcacattattcagtgtaatcatatgtgtcgt 17831536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 180
Target Start/End: Complemental strand, 22794145 - 22794083
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcgt 180  Q
    |||||| | |||||||||||||||| | ||||| |||||||  |||||||||||| |||||||    
T  22794145 gacacgtcaacacggataataatttgaaaaaatgacataatacagtgtaattataggtgtcgt 22794083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 179
Target Start/End: Complemental strand, 23714768 - 23714710
Alignment:
Q  121 acgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    |||||||||| | ||| ||||  |||||||||||||||| |||||||||||| ||||||    
T  23714768 acgccgacaccgctaaaaattagagaaaattacataattaagtgtaattatacgtgtcg 23714710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 1815249 - 1815310
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    |||||||||||||  ||||| |||| | ||||| |||||||| |||||||||| ||||||||    
T  1815249 gacacgccgacacaaataattattttaaaaaatcacataattcagtgtaattacaagtgtcg 1815310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 18190159 - 18190114
Alignment:
Q  134 taataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||| | |||||||||||||| |||||||||| ||||||||    
T  18190159 taataatttgaaaaaattacataattcagtgtaattacaagtgtcg 18190114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 21378570 - 21378631
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||| ||||||| | |||||| || | |||||||||||||| |||||||||| ||||||||    
T  21378570 gacacaccgacacagctaataaattgaaaaaattacataattcagtgtaattacaagtgtcg 21378631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 22907390 - 22907345
Alignment:
Q  134 taataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||| ||||||||| ||||||| || |||||||||||||||    
T  22907390 taataatttgagaaaattatataatttggtataattataagtgtcg 22907345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 178
Target Start/End: Complemental strand, 32724162 - 32724105
Alignment:
Q  121 acgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtc 178  Q
    |||||||||  | ||||||||| ||||| |||||||||||| |||||||||| |||||    
T  32724162 acgccgacatcgttaataatttgagaaatttacataatttaatgtaattatatgtgtc 32724105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 166
Target Start/End: Complemental strand, 2896188 - 2896140
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgta 166  Q
    ||||||||||||| | ||||||||| ||||||| |||||||| ||||||    
T  2896188 gacacgccgacaccgctaataatttgagaaaatcacataattcagtgta 2896140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 5944273 - 5944336
Alignment:
Q  118 gacacgccgacacggataataattt--aagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||| ||| | |||||||||  || ||||| |||||||| |||||||||||||||||||    
T  5944273 gacacgccgccacagctaataatttgaaaaaaaatcacataattcagtgtaattataagtgtcg 5944336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 178
Target Start/End: Complemental strand, 7918262 - 7918218
Alignment:
Q  134 taataatttaagaaaattacataatttagtgtaattataagtgtc 178  Q
    ||||||||| ||||||| |||||||| |||||||||||| |||||    
T  7918262 taataatttgagaaaatcacataattcagtgtaattatatgtgtc 7918218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 15323171 - 15323215
Alignment:
Q  134 taataatttaagaaaattacataatttagtgtaattataagtgtc 178  Q
    ||||||||| | ||||| |||||||||||||||||| ||||||||    
T  15323171 taataatttgaaaaaatcacataatttagtgtaattgtaagtgtc 15323215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 178
Target Start/End: Original strand, 17754303 - 17754363
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtc 178  Q
    ||||| ||||||| | ||||||||| | |||||||||||||| ||||||| |||| |||||    
T  17754303 gacacaccgacaccgctaataatttgaaaaaattacataattcagtgtaactatatgtgtc 17754363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 24176425 - 24176373
Alignment:
Q  127 acacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    |||| ||||||||||| ||||||| |||| ||| |||||||||||| ||||||    
T  24176425 acaccgataataatttgagaaaataacatcattcagtgtaattataggtgtcg 24176373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 172
Target Start/End: Original strand, 44506137 - 44506173
Alignment:
Q  136 ataatttaagaaaattacataatttagtgtaattata 172  Q
    ||||||| ||||||||||||||||||| |||||||||    
T  44506137 ataatttgagaaaattacataatttagagtaattata 44506173  T

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Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 179
Target Start/End: Original strand, 52903242 - 52903302
Alignment:
Q  119 acacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||| || | ||||||||||| ||||| | |||||| |||||||||||| ||||||    
T  52903242 acacgccgataccgttaataatttaataaaatcatataattcagtgtaattatatgtgtcg 52903302  T

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Target: chr3 (Bit Score: 48; Significance: 2e-18; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 118 - 185
Target Start/End: Complemental strand, 24205108 - 24205041
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcgtatcgg 185  Q
    ||||||||||||||||||||||||| ||||||| |||||||  |||||||||||||||||||| ||||    
T  24205108 gacacgccgacacggataataatttgagaaaatgacataatacagtgtaattataagtgtcgtgtcgg 24205041  T

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Target: chr3; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 117 - 198
Target Start/End: Complemental strand, 14223921 - 14223840
Alignment:
Q  117 cgacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcgtatcggtgtcggacaccga 198  Q
    |||||||||||||| ||||||||||| ||||||  | ||||||||||||| | ||||||||||| |||||||| ||||||||    
T  14223921 cgacacgccgacacagataataatttgagaaaacgatataatttagtgtattcataagtgtcgtgtcggtgtccgacaccga 14223840  T

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Target: chr3; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 116 - 196
Target Start/End: Original strand, 8903422 - 8903501
Alignment:
Q  116 acgacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcgtatcggtgtcggacacc 196  Q
    ||||||||||||||||||||||| ||| ||||||| |||| |||||||||||||||| ||||||| ||| || ||||||||    
T  8903422 acgacacgccgacacggataatattttgagaaaatgacat-atttagtgtaattataggtgtcgtgtcgatgccggacacc 8903501  T

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Target: chr3; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 207 - 291
Target Start/End: Complemental strand, 31105473 - 31105389
Alignment:
Q  207 agtgaaatagtagctaattatttagatatttactaccattacacttcctagcacagtcatggtagcaaatcttatatattcttgt 291  Q
    |||||||| |||||||||||||| ||||||||||||||||||  ||||||  | ||| ||| |||| ||||||||||||||||||    
T  31105473 agtgaaatggtagctaattattttgatatttactaccattacctttcctaagatagttatgatagcgaatcttatatattcttgt 31105389  T

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Target: chr3; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 119 - 195
Target Start/End: Complemental strand, 34307846 - 34307770
Alignment:
Q  119 acacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcgtatcggtgtcggacac 195  Q
    |||||| ||||| | ||||||||| ||||||| ||||| || |||||||||||||||||||| ||||||||||||||    
T  34307846 acacgctgacaccgctaataatttgagaaaatcacatatttcagtgtaattataagtgtcgtgtcggtgtcggacac 34307770  T

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Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 118 - 195
Target Start/End: Original strand, 5339100 - 5339177
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcgtatcggtgtcggacac 195  Q
    ||||||||||||  | ||||||||| ||||||| |||||||||| |||||  | ||||||||||||||||||||||||    
T  5339100 gacacgccgacattgttaataatttgagaaaatcacataatttaatgtaaaaacaagtgtcgtatcggtgtcggacac 5339177  T

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Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 15864823 - 15864892
Alignment:
Q  116 acgacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcgtatcgg 185  Q
    ||||||||||||||||||||||||||| | ||||| | ||||||||||||||| ||| ||||||| ||||    
T  15864823 acgacacgccgacacggataataatttgaaaaaatgatataatttagtgtaatcataggtgtcgtgtcgg 15864892  T

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Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 127 - 198
Target Start/End: Original strand, 21211289 - 21211360
Alignment:
Q  127 acacggataataatttaagaaaattacataatttagtgtaattataagtgtcgtatcggtgtcggacaccga 198  Q
    |||||||||||||||| ||||||||||||| || |||||||||||  ||||||| |||||||  ||||||||    
T  21211289 acacggataataatttgagaaaattacatagttcagtgtaattatgggtgtcgtgtcggtgttcgacaccga 21211360  T

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Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 127 - 198
Target Start/End: Original strand, 25326427 - 25326498
Alignment:
Q  127 acacggataataatttaagaaaattacataatttagtgtaattataagtgtcgtatcggtgtcggacaccga 198  Q
    |||| ||||||||||||| ||||| | |||||||||||||||||||  |||||| | |||||||||||||||    
T  25326427 acacagataataatttaaaaaaataatataatttagtgtaattatagatgtcgtgttggtgtcggacaccga 25326498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 118 - 196
Target Start/End: Original strand, 25074781 - 25074859
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcgtatcggtgtcggacacc 196  Q
    ||||||||||||| ||||||||||| ||||||| |||||||| |||||||| ||| | || || |||||||| ||||||    
T  25074781 gacacgccgacaccgataataatttgagaaaatgacataattgagtgtaatcataggcgttgtgtcggtgtctgacacc 25074859  T

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Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 125 - 191
Target Start/End: Original strand, 52369774 - 52369840
Alignment:
Q  125 cgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcgtatcggtgtcgg 191  Q
    ||||| |||||||||||| |||||||||||||||| | |||||| ||| ||||||| ||||||||||    
T  52369774 cgacatggataataatttgagaaaattacataattcaatgtaatcataggtgtcgtgtcggtgtcgg 52369840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 8383249 - 8383310
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||||||| | ||||||||| ||||||| | |||||| |||||||||||||||||||    
T  8383249 gacacgccgacaccgctaataatttgagaaaatcatataattcagtgtaattataagtgtcg 8383310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 196
Target Start/End: Complemental strand, 12704715 - 12704646
Alignment:
Q  127 acacggataataatttaagaaaattacataatttagtgtaattataagtgtcgtatcggtgtcggacacc 196  Q
    |||||||||||||||| | ||||| |||||||| | |||||| ||| ||||||| |||||||||||||||    
T  12704715 acacggataataatttgaaaaaatgacataattcaatgtaatcataggtgtcgtgtcggtgtcggacacc 12704646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 10268553 - 10268493
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtc 178  Q
    ||||||||||||| | ||||||||| | ||||| ||||||||||||||||||| |||||||    
T  10268553 gacacgccgacacagttaataatttgaaaaaatcacataatttagtgtaattacaagtgtc 10268493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 32804607 - 32804547
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtc 178  Q
    |||| |||||||| | ||||||||| ||||||| ||||||||||||||||||||| |||||    
T  32804607 gacatgccgacaccgttaataatttgagaaaatcacataatttagtgtaattatatgtgtc 32804547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 198
Target Start/End: Complemental strand, 25652097 - 25652018
Alignment:
Q  119 acacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcgtatcggtgtcggacaccga 198  Q
    ||||||| |||||||||||||||| ||||||| | |||||| |||||| ||||| |||| || || |||| |||||||||    
T  25652097 acacgccaacacggataataatttgagaaaatgatataattcagtgtagttataggtgttgtgtcagtgttggacaccga 25652018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 196
Target Start/End: Original strand, 25892467 - 25892530
Alignment:
Q  133 ataataatttaagaaaattacataatttagtgtaattataagtgtcgtatcggtgtcggacacc 196  Q
    |||||||||||||||||| | |||||| |||||||| ||| ||||||| || ||||||||||||    
T  25892467 ataataatttaagaaaatgatataattcagtgtaatcataggtgtcgtgtcagtgtcggacacc 25892530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 4991034 - 4990973
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||| ||||||| | ||||| ||| |||||||||||||||| |||||||||| ||||||||    
T  4991034 gacactccgacaccgctaatagtttgagaaaattacataattcagtgtaattacaagtgtcg 4990973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 8039902 - 8039841
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    |||||||| |||| | ||||||||| ||||||||| |||||| |||||||||||| ||||||    
T  8039902 gacacgccaacaccgctaataatttgagaaaattatataattcagtgtaattatatgtgtcg 8039841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 9800032 - 9800093
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    |||||||||||||   ||||||||| ||||||||||||||||  |||||||| |||||||||    
T  9800032 gacacgccgacacctctaataatttgagaaaattacataattccgtgtaattgtaagtgtcg 9800093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 124 - 177
Target Start/End: Complemental strand, 11313861 - 11313808
Alignment:
Q  124 ccgacacggataataatttaagaaaattacataatttagtgtaattataagtgt 177  Q
    ||||||| | ||||||||| ||||||| ||||||||||||||||||||| ||||    
T  11313861 ccgacactgctaataatttgagaaaatcacataatttagtgtaattatatgtgt 11313808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 34185190 - 34185129
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||||||||| ||||||||| | ||||| ||| |||| |||||||||| ||||||||    
T  34185190 gacacgccgacacggctaataatttcaaaaaatcacacaattcagtgtaattacaagtgtcg 34185129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 178
Target Start/End: Complemental strand, 49505222 - 49505161
Alignment:
Q  117 cgacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtc 178  Q
    |||||||| || || | ||||||||| ||||||| ||||||||||||||||||||| |||||    
T  49505222 cgacacgcagagaccgctaataatttgagaaaatcacataatttagtgtaattatatgtgtc 49505161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 182
Target Start/End: Original strand, 1830351 - 1830399
Alignment:
Q  134 taataatttaagaaaattacataatttagtgtaattataagtgtcgtat 182  Q
    ||||||||||||||||| |||||||| |||||||| ||| |||||||||    
T  1830351 taataatttaagaaaatgacataattcagtgtaatcataggtgtcgtat 1830399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 177
Target Start/End: Complemental strand, 16192818 - 16192758
Alignment:
Q  117 cgacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgt 177  Q
    |||||| ||||||| | ||||||||| ||||||| |||||||| |||||||||||| ||||    
T  16192818 cgacacaccgacaccgttaataatttgagaaaataacataattcagtgtaattatatgtgt 16192758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 190
Target Start/End: Complemental strand, 17568734 - 17568678
Alignment:
Q  134 taataatttaagaaaattacataatttagtgtaattataagtgtcgtatcggtgtcg 190  Q
    ||||||||| |||||||||||||||||| |||||||| |||||| || | |||||||    
T  17568734 taataatttgagaaaattacataatttaatgtaattacaagtgtagtgttggtgtcg 17568678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 177
Target Start/End: Complemental strand, 4987358 - 4987299
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgt 177  Q
    ||||||||||||| | ||||||||| | ||||| |||||||| |||||||||| ||||||    
T  4987358 gacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgt 4987299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 177
Target Start/End: Complemental strand, 25948954 - 25948895
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgt 177  Q
    |||| ||||| |||| ||||||||| | ||||| |||||||| |||||||||||||||||    
T  25948954 gacatgccgatacggctaataatttgaaaaaatcacataattcagtgtaattataagtgt 25948895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 127 - 198
Target Start/End: Original strand, 27903633 - 27903704
Alignment:
Q  127 acacggataataatttaagaaaattacataatttagtgtaattataagtgtcgtatcggtgtcggacaccga 198  Q
    |||| ||||||||||| ||||||  | |||||||| |||||| |||||||| || ||||||||||| |||||    
T  27903633 acacagataataatttgagaaaacgatataatttaatgtaatcataagtgttgtgtcggtgtcggataccga 27903704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 178
Target Start/End: Original strand, 14209103 - 14209165
Alignment:
Q  116 acgacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtc 178  Q
    |||||||||||||||   ||||||||| | ||||| |||||||| |||||||||| |||||||    
T  14209103 acgacacgccgacacaactaataattttaaaaaatcacataattcagtgtaattacaagtgtc 14209165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 195
Target Start/End: Original strand, 21479110 - 21479188
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtc-gtatcggtgtcggacac 195  Q
    ||||||||||||| | ||||||||| | ||||| ||| |||| ||||||||||  |||||| || ||||||||||||||    
T  21479110 gacacgccgacacagctaataatttgaaaaaatcacacaattcagtgtaattactagtgtcggtgtcggtgtcggacac 21479188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 192
Target Start/End: Complemental strand, 41319377 - 41319303
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcgtatcggtgtcgga 192  Q
    |||||| ||||||  |||||||||| | ||||| |||||||| | ||||||| || ||||||| |||||||||||    
T  41319377 gacacgtcgacaccaataataatttgaaaaaatgacataattcaatgtaattgtatgtgtcgtgtcggtgtcgga 41319303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 172
Target Start/End: Original strand, 47362570 - 47362608
Alignment:
Q  134 taataatttaagaaaattacataatttagtgtaattata 172  Q
    |||||||||||||||||||||||||| | ||||||||||    
T  47362570 taataatttaagaaaattacataattgaatgtaattata 47362608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 179
Target Start/End: Original strand, 55401070 - 55401128
Alignment:
Q  121 acgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||||   ||||||||| | ||||| ||||||||||||||||||| ||||||||    
T  55401070 acgccgacacaactaataatttgaaaaaatcacataatttagtgtaattacaagtgtcg 55401128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 1509547 - 1509592
Alignment:
Q  134 taataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||| | ||||| ||||||||||||||||||| ||||||||    
T  1509547 taataatttgaaaaaatcacataatttagtgtaattacaagtgtcg 1509592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 1514609 - 1514670
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||||||| | ||||||||| | | ||   |||||||||||||||||||||||||||    
T  1514609 gacacgccgacaccgctaataatttgaaagaaacgcataatttagtgtaattataagtgtcg 1514670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 8789617 - 8789556
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||| ||||||||| | ||||||| ||||||| ||||||||  ||||||||||| ||||||    
T  8789617 gacacaccgacacggcttataatttgagaaaatcacataattccgtgtaattatatgtgtcg 8789556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 170
Target Start/End: Original strand, 14747553 - 14747606
Alignment:
Q  118 gacacgccgacacggataataattt-aagaaaattacataatttagtgtaatta 170  Q
    ||||||||||||| | ||||||||| || ||||| |||||||||||||||||||    
T  14747553 gacacgccgacacagctaataatttgaaaaaaatcacataatttagtgtaatta 14747606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 174
Target Start/End: Complemental strand, 14840359 - 14840302
Alignment:
Q  117 cgacacgccgacacggataataatttaagaaaattacataatttagtgtaattataag 174  Q
    ||||||||| ||||   ||||||||| ||||||| |||||||| ||||||||||||||    
T  14840359 cgacacgccaacaccattaataatttcagaaaatcacataattcagtgtaattataag 14840302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 16000083 - 16000022
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    |||||||||||||   ||||||||||| ||||| |||||||| ||||||| || ||||||||    
T  16000083 gacacgccgacacaactaataatttaaaaaaataacataattcagtgtaactacaagtgtcg 16000022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 171
Target Start/End: Original strand, 25064901 - 25064954
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattat 171  Q
    ||||||||||||| | |||| |||| | ||||| ||||||||||||||||||||    
T  25064901 gacacgccgacaccgctaatgatttgaaaaaatcacataatttagtgtaattat 25064954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 171
Target Start/End: Complemental strand, 27277889 - 27277852
Alignment:
Q  134 taataatttaagaaaattacataatttagtgtaattat 171  Q
    ||||||||| ||||||| ||||||||||||||||||||    
T  27277889 taataatttgagaaaatcacataatttagtgtaattat 27277852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 28917993 - 28918054
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||||||  | ||||||||| | ||||| |||||||| |||||||||| ||||||||    
T  28917993 gacacgccgacatagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 28918054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 7614476 - 7614428
Alignment:
Q  124 ccgacacggataataatttaagaaaattacataatttagtgtaattata 172  Q
    ||||||| | ||||||||||||||||| |||||||| ||| ||||||||    
T  7614476 ccgacacagttaataatttaagaaaatcacataattcagtataattata 7614428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 178
Target Start/End: Original strand, 11610513 - 11610573
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtc 178  Q
    |||||||| |||| | ||||||||||| ||||| |||||||| |||||| ||| |||||||    
T  11610513 gacacgccaacaccgctaataatttaaaaaaatcacataattcagtgtagttacaagtgtc 11610573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 167
Target Start/End: Complemental strand, 16789712 - 16789668
Alignment:
Q  123 gccgacacggataataatttaagaaaattacataatttagtgtaa 167  Q
    |||||||| ||||||||||| ||||||| |||||||| |||||||    
T  16789712 gccgacacagataataatttgagaaaatgacataattcagtgtaa 16789668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 179
Target Start/End: Original strand, 25093495 - 25093555
Alignment:
Q  119 acacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    |||||||||||| | |||| |||| ||||||| ||| |||| |||||||||||| ||||||    
T  25093495 acacgccgacactgttaatgatttgagaaaatcacacaattcagtgtaattatatgtgtcg 25093555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 48202336 - 48202276
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtc 178  Q
    ||||||||||||   |||||| ||| ||||||| |||||||||| |||||||||| |||||    
T  48202336 gacacgccgacatccataatagtttgagaaaatcacataatttaatgtaattatatgtgtc 48202276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 179
Target Start/End: Original strand, 55212960 - 55213016
Alignment:
Q  123 gccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    |||||||| | ||||||||| | ||||| ||||||||||||| ||||| ||||||||    
T  55212960 gccgacacagttaataattttaaaaaatcacataatttagtgcaattacaagtgtcg 55213016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 3e-17; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 125 - 198
Target Start/End: Original strand, 43554520 - 43554593
Alignment:
Q  125 cgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcgtatcggtgtcggacaccga 198  Q
    ||||||| |||||||||| ||||||| | ||||||||||||||| ||| ||||||| |||||||||||||||||    
T  43554520 cgacacgtataataatttgagaaaatgatataatttagtgtaatcataggtgtcgtgtcggtgtcggacaccga 43554593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 117 - 200
Target Start/End: Original strand, 25863195 - 25863278
Alignment:
Q  117 cgacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcgtatcggtgtcggacaccgatg 200  Q
    ||||||| ||||| | |||||||||| ||||||| | |||||| |||||||||||||||||||| || ||||||| ||||||||    
T  25863195 cgacacgtcgacatgtataataatttgagaaaatgatataattcagtgtaattataagtgtcgtgtcagtgtcgggcaccgatg 25863278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 185
Target Start/End: Complemental strand, 7997233 - 7997166
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcgtatcgg 185  Q
    |||||||| |||||||||||||||| ||||||| | |||||  |||||||||||||||||||| ||||    
T  7997233 gacacgccaacacggataataatttgagaaaatgatataatacagtgtaattataagtgtcgtgtcgg 7997166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 118 - 168
Target Start/End: Original strand, 42469213 - 42469263
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaat 168  Q
    ||||||||||||||||||||||||| ||||||| ||||| |||||||||||    
T  42469213 gacacgccgacacggataataatttgagaaaatgacatattttagtgtaat 42469263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 14674261 - 14674322
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||||||| | ||||||||| | ||||| ||||||||||||||||||| ||||||||    
T  14674261 gacacgccgacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcg 14674322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 28588741 - 28588680
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||||||| | ||||||||| ||||||| |||||||| |||||||||||| ||||||    
T  28588741 gacacgccgacaccggtaataatttgagaaaatcacataattcagtgtaattataggtgtcg 28588680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 33178017 - 33178078
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    |||||||||||||   ||||||||||| ||||| ||||||||||||||||||| ||||||||    
T  33178017 gacacgccgacacaactaataatttaaaaaaatcacataatttagtgtaattacaagtgtcg 33178078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 36838551 - 36838596
Alignment:
Q  134 taataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||    
T  36838551 taataatttgagaaaattacataatttagtgtaattatatgtgtcg 36838596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 118 - 178
Target Start/End: Original strand, 27144455 - 27144515
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtc 178  Q
    ||||||||||||| | ||||||||| || |||| ||||||||||||||||||||| |||||    
T  27144455 gacacgccgacaccgctaataatttgaggaaatcacataatttagtgtaattatatgtgtc 27144515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 173
Target Start/End: Original strand, 22013406 - 22013461
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataa 173  Q
    ||||||||||||| | |||||||||   ||||||||||||||||||||||||||||    
T  22013406 gacacgccgacacagctaataatttggaaaaattacataatttagtgtaattataa 22013461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 124 - 195
Target Start/End: Complemental strand, 39696060 - 39695989
Alignment:
Q  124 ccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcgtatcggtgtcggacac 195  Q
    ||||||| || |||||||| ||||||| | ||||||||||||||| ||| ||||||| |||||||| |||||    
T  39696060 ccgacaccgacaataatttgagaaaatgatataatttagtgtaatcataggtgtcgtgtcggtgtccgacac 39695989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 168
Target Start/End: Original strand, 18162055 - 18162097
Alignment:
Q  126 gacacggataataatttaagaaaattacataatttagtgtaat 168  Q
    ||||||||||||||||||||||||| |||||||| ||||||||    
T  18162055 gacacggataataatttaagaaaatgacataattcagtgtaat 18162097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 179
Target Start/End: Original strand, 19579696 - 19579754
Alignment:
Q  121 acgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    |||||||||| | ||||||||| ||||||| ||||||||||||| ||||| ||||||||    
T  19579696 acgccgacacagctaataatttgagaaaatcacataatttagtgcaattacaagtgtcg 19579754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 120 - 170
Target Start/End: Original strand, 27932229 - 27932279
Alignment:
Q  120 cacgccgacacggataataatttaagaaaattacataatttagtgtaatta 170  Q
    ||||||||||| | ||||||||| |||||||||||||||| ||||||||||    
T  27932229 cacgccgacaccgctaataatttgagaaaattacataattcagtgtaatta 27932279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 5468031 - 5467974
Alignment:
Q  132 gataataatttaagaaaattacataatttagtgtaattataagtgtcgtatcggtgtc 189  Q
    ||||||||||| | ||||| |||||||| |||||||||||| ||||||| ||||||||    
T  5468031 gataataatttgataaaatcacataattcagtgtaattataggtgtcgtgtcggtgtc 5467974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 211 - 280
Target Start/End: Complemental strand, 15209551 - 15209482
Alignment:
Q  211 aaatagtagctaattatttagatatttactaccattacacttcctagcacagtcatggtagcaaatctta 280  Q
    |||| |||||||||| |||  ||||| ||||||| || | ||||||||||||| ||||||||||||||||    
T  15209551 aaatggtagctaattgttttaatattcactaccaatatatttcctagcacagttatggtagcaaatctta 15209482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 24906368 - 24906307
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    |||||||| |||| ||||||||||| | ||||| |||||||| |||||||||| ||||||||    
T  24906368 gacacgccaacacagataataatttgaaaaaatgacataattcagtgtaattacaagtgtcg 24906307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 168
Target Start/End: Complemental strand, 2577241 - 2577197
Alignment:
Q  124 ccgacacggataataatttaagaaaattacataatttagtgtaat 168  Q
    ||||||| ||||||||||| ||||||| |||||||||||||||||    
T  2577241 ccgacaccgataataatttgagaaaatgacataatttagtgtaat 2577197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 6326364 - 6326304
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtc 178  Q
    ||||||||||||  | || |||||| |||||||||||||||| |||||||||| |||||||    
T  6326364 gacacgccgacatcgctagtaatttgagaaaattacataattcagtgtaattacaagtgtc 6326304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 123 - 179
Target Start/End: Complemental strand, 16203857 - 16203801
Alignment:
Q  123 gccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    |||||||| | ||||||||| |||||||  |||||||||||||||||||| ||||||    
T  16203857 gccgacactgctaataatttgagaaaatctcataatttagtgtaattatatgtgtcg 16203801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 32630802 - 32630742
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtc 178  Q
    ||||||| ||||| ||||||||||| ||||||||| |||||| | |||||||||| |||||    
T  32630802 gacacgctgacaccgataataatttgagaaaattatataattcaatgtaattatatgtgtc 32630742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 132 - 179
Target Start/End: Original strand, 2548393 - 2548440
Alignment:
Q  132 gataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||||  |||||||||||||||| |||||||| ||||||||||    
T  2548393 gataataattagagaaaattacataattcagtgtaatcataagtgtcg 2548440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 6471948 - 6471897
Alignment:
Q  126 gacacggataataatttaagaaaattacataatttagtgtaattataagtgt 177  Q
    ||||||| ||||||||| ||||||| |||||||| |||||||||||| ||||    
T  6471948 gacacggctaataatttgagaaaatcacataattcagtgtaattatatgtgt 6471897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 177
Target Start/End: Complemental strand, 15410515 - 15410456
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgt 177  Q
    ||||||||||||| | ||||||||||||||||||| || ||| |||||||| ||| ||||    
T  15410515 gacacgccgacaccgctaataatttaagaaaattatatgattcagtgtaatcatatgtgt 15410456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 117 - 172
Target Start/End: Original strand, 35017028 - 35017083
Alignment:
Q  117 cgacacgccgacacggataataatttaagaaaattacataatttagtgtaattata 172  Q
    ||||||||||| ||   ||||||||| ||||||| |||||||||||||||||||||    
T  35017028 cgacacgccgaaaccactaataatttgagaaaatcacataatttagtgtaattata 35017083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 177
Target Start/End: Complemental strand, 19293489 - 19293431
Alignment:
Q  119 acacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgt 177  Q
    |||||| |||||  |||||||||||||||||| |||||||| |||||||| ||| ||||    
T  19293489 acacgctgacaccaataataatttaagaaaataacataattaagtgtaatcatatgtgt 19293431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 196
Target Start/End: Complemental strand, 26205827 - 26205749
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcgtatcggtgtcggacacc 196  Q
    |||||| ||| || ||||| | ||| ||||||| |||||||| |||||||| ||| ||||||| | |||||||||||||    
T  26205827 gacacgtcgataccgataaaattttgagaaaatgacataattcagtgtaatcataggtgtcgtgttggtgtcggacacc 26205749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 31264446 - 31264492
Alignment:
Q  134 taataatttaagaaaattacataatttagtgtaattataagtgtcgt 180  Q
    ||||||||| ||||||| |||||||| |||||||| |||||||||||    
T  31264446 taataatttgagaaaatgacataattcagtgtaatcataagtgtcgt 31264492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 43564875 - 43564934
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    |||||||||||||  || |||||||   ||||| ||||||||||||||||||||||||||||    
T  43564875 gacacgccgacac--atcataatttggaaaaatcacataatttagtgtaattataagtgtcg 43564934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 3966495 - 3966556
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    |||| |||||||| | ||||||||| ||||||| ||| |||| |||||||||||| ||||||    
T  3966495 gacatgccgacaccgctaataatttgagaaaatcacacaattcagtgtaattatatgtgtcg 3966556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 6247614 - 6247675
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    |||||||||||||   ||||||||| | ||||| |||||||| |||||||||| ||||||||    
T  6247614 gacacgccgacacatctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 6247675  T

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Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 11685931 - 11685992
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    |||| |||||||| | ||||||||| ||||| |  |||||||||||||||||||| ||||||    
T  11685931 gacatgccgacaccgctaataatttgagaaagtcgcataatttagtgtaattatatgtgtcg 11685992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 172
Target Start/End: Original strand, 18592070 - 18592119
Alignment:
Q  123 gccgacacggataataatttaagaaaattacataatttagtgtaattata 172  Q
    |||||||| | ||||| |||||||||||||||||||| | ||||||||||    
T  18592070 gccgacaccgctaatattttaagaaaattacataattcaatgtaattata 18592119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 21522742 - 21522803
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||||||| | ||||||||| | ||||| |||||||| |||||||||| || |||||    
T  21522742 gacacgccgacacagctaataattttaaaaaataacataattcagtgtaattacaattgtcg 21522803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 21533308 - 21533369
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||||||| | ||||||||| | ||||| |||||||| |||||||||| || |||||    
T  21533308 gacacgccgacacagctaataattttaaaaaataacataattcagtgtaattacaattgtcg 21533369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 31084315 - 31084376
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||||||| | ||||||||| | ||||| |||||||| | |||||||| ||||||||    
T  31084315 gacacgccgacacagctaataatttgaaaaaatcacataattcaatgtaattacaagtgtcg 31084376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 36642829 - 36642768
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||||||| | ||||||||| | ||| | ||||| |||||||||| |||||||||||    
T  36642829 gacacgccgacacagttaataatttgaaaaagtgacatattttagtgtaaatataagtgtcg 36642768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 179
Target Start/End: Complemental strand, 13287465 - 13287405
Alignment:
Q  119 acacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||| |||||| ||||||||||| | ||||| |||||||| ||||||| || ||||||||    
T  13287465 acacgtcgacacagataataatttgaaaaaatcacataattcagtgtaactacaagtgtcg 13287405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 180
Target Start/End: Complemental strand, 18607158 - 18607102
Alignment:
Q  124 ccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcgt 180  Q
    |||||| |||||||||||| ||||||| |||||||| | |||||| ||| |||||||    
T  18607158 ccgacatggataataatttgagaaaataacataattcaatgtaatcataggtgtcgt 18607102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 43001799 - 43001851
Alignment:
Q  125 cgacacggataataatttaagaaaattacataatttagtgtaattataagtgt 177  Q
    |||||| | ||||||||| | |||||||||||||| |||||||||| ||||||    
T  43001799 cgacactgctaataatttgaaaaaattacataattcagtgtaattacaagtgt 43001851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 118 - 190
Target Start/End: Complemental strand, 225335 - 225263
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcgtatcggtgtcg 190  Q
    ||||||||||||| ||||||||||| ||||||| |||||||  | |||||||||||||||||| | |||||||    
T  225335 gacacgccgacacagataataatttgagaaaatgacataatacaatgtaattataagtgtcgtgttggtgtcg 225263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 118 - 178
Target Start/End: Original strand, 92799 - 92859
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtc 178  Q
    ||||||||||||| | ||||||||| |||||||||||||||| |||||||||| |||||||    
T  92799 gacacgccgacaccgctaataatttgagaaaattacataattcagtgtaattacaagtgtc 92859  T

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Target: scaffold0236 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 126 - 179
Target Start/End: Complemental strand, 25827 - 25774
Alignment:
Q  126 gacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||| ||||||||  ||||||| ||||||||||||||||||||||||||||    
T  25827 gacacggttaataattagagaaaatcacataatttagtgtaattataagtgtcg 25774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 23412 - 23473
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||||||| |||||||| | || ||||| |||||||| |||||||||||||||||||    
T  23412 gacacgccgacacagataataactcaaaaaaatcacataattcagtgtaattataagtgtcg 23473  T

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Target: scaffold0018 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 118 - 178
Target Start/End: Complemental strand, 192316 - 192256
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtc 178  Q
    ||||||||||||| | ||||||||| ||||||||||||||||  ||||||||| |||||||    
T  192316 gacacgccgacaccgttaataatttgagaaaattacataattcggtgtaattacaagtgtc 192256  T

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Target: scaffold0136 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 178
Target Start/End: Complemental strand, 3911 - 3856
Alignment:
Q  123 gccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtc 178  Q
    |||||||||| ||||||||||| ||||| |||||||| |||||||||| |||||||    
T  3911 gccgacacggttaataatttaaaaaaatcacataattcagtgtaattacaagtgtc 3856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0697 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 1636 - 1697
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||||||| | ||||||||| ||||||| | ||||||| || |||||||||||||||    
T  1636 gacacgccgacaccgttaataatttgagaaaatcatataatttggtataattataagtgtcg 1697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 53172 - 53233
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    |||||||||| || |  |||||||| ||||||| |||||||| |||||||||||||||||||    
T  53172 gacacgccgataccgccaataatttgagaaaatcacataattcagtgtaattataagtgtcg 53233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 241586 - 241647
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||||||| | |||||||||   ||||| |||||||||||||||||||| |||||||    
T  241586 gacacgccgacacagctaataatttggaaaaatcacataatttagtgtaattatgagtgtcg 241647  T

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Target: scaffold0223 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 178
Target Start/End: Original strand, 20164 - 20224
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtc 178  Q
    ||||||||||||| | ||||||||| | ||||| |||||||| |||||||||| |||||||    
T  20164 gacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtc 20224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 185
Target Start/End: Original strand, 1948 - 2008
Alignment:
Q  125 cgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcgtatcgg 185  Q
    ||||||||||||||||||  |||||| ||||| ||||||||||| ||| ||||||| ||||    
T  1948 cgacacggataataatttgtgaaaatgacatattttagtgtaatcataggtgtcgtgtcgg 2008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 179
Target Start/End: Original strand, 28843 - 28903
Alignment:
Q  119 acacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    |||||||||||| | |||||||||||||||||  ||||||| | |||||||||| ||||||    
T  28843 acacgccgacaccgttaataatttaagaaaatcgcataattcaatgtaattatatgtgtcg 28903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 33430 - 33355
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcgtatcggtgtcggaca 194  Q
    ||||||||||||| | ||||||||| | ||||| |||||||| |||||||||| || |||||| |||||||| ||||    
T  33430 gacacgccgacacagctaataatttgaaaaaataacataattcagtgtaattacaa-tgtcgtgtcggtgtccgaca 33355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 177
Target Start/End: Complemental strand, 7378 - 7319
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgt 177  Q
    |||||||||||||   |||||||||   ||||| ||||||||||||||||||||||||||    
T  7378 gacacgccgacacaactaataatttggaaaaatcacataatttagtgtaattataagtgt 7319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 177
Target Start/End: Original strand, 51803 - 51862
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgt 177  Q
    ||||||||||||| | ||||||||| | ||||| |||||||| |||||||||| ||||||    
T  51803 gacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgt 51862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 167
Target Start/End: Complemental strand, 8121 - 8071
Alignment:
Q  117 cgacacgccgacacggataataatttaagaaaattacataatttagtgtaa 167  Q
    ||||||| ||| |||||||||||||| ||||||| |||||||| |||||||    
T  8121 cgacacgtcgatacggataataatttgagaaaatgacataattcagtgtaa 8071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 195
Target Start/End: Original strand, 13392 - 13470
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtc-gtatcggtgtcggacac 195  Q
    |||||||||||||   ||||||||| ||||||| |||||||| |||| ||||| ||| ||| || ||||||||||||||    
T  13392 gacacgccgacacaactaataatttgagaaaatcacataattcagtgcaattacaagggtcggtgtcggtgtcggacac 13470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 195
Target Start/End: Complemental strand, 21935 - 21857
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtc-gtatcggtgtcggacac 195  Q
    |||||||||||||   ||||||||| ||||||| |||||||| |||| ||||| ||| ||| || ||||||||||||||    
T  21935 gacacgccgacacaactaataatttgagaaaatcacataattcagtgcaattacaagggtcggtgtcggtgtcggacac 21857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 179
Target Start/End: Original strand, 70277 - 70331
Alignment:
Q  125 cgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    |||||| | ||||||||| | ||||| |||||||| |||||||||||||||||||    
T  70277 cgacacagttaataatttgaaaaaataacataattcagtgtaattataagtgtcg 70331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 8790 - 8851
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||||||| | ||||||||| | ||||| | || |||||||||||||| ||||||||    
T  8790 gacacgccgacacagctaataatttgaaaaaatcatattatttagtgtaattacaagtgtcg 8851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 63781 - 63826
Alignment:
Q  134 taataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||| |||||||||||||||| |||| ||||| ||||||||    
T  63781 taataatttgagaaaattacataattcagtgcaattacaagtgtcg 63826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 179
Target Start/End: Original strand, 46674 - 46735
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||||||| | ||||||||| | ||||| |||||||| |||||||||| || |||||    
T  46674 gacacgccgacacagttaataatttgaaaaaatcacataattcagtgtaattacaaatgtcg 46735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 17800 - 17755
Alignment:
Q  134 taataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    ||||||||| | ||||| ||||||||||||||||||| ||||||||    
T  17800 taataatttgaaaaaatcacataatttagtgtaattacaagtgtcg 17755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1528 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 178
Target Start/End: Original strand, 1027 - 1087
Alignment:
Q  118 gacacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtc 178  Q
    ||||| ||||||| | ||||||||| | |||||||||||||| ||||||| |||| |||||    
T  1027 gacacaccgacaccgctaataatttgaaaaaattacataattcagtgtaactatatgtgtc 1087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 177
Target Start/End: Complemental strand, 7092 - 7040
Alignment:
Q  125 cgacacggataataatttaagaaaattacataatttagtgtaattataagtgt 177  Q
    |||||| | ||||||||| | |||||||||||||||||| |||||| ||||||    
T  7092 cgacacagctaataatttgaaaaaattacataatttagtataattacaagtgt 7040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 177
Target Start/End: Original strand, 99892 - 99944
Alignment:
Q  125 cgacacggataataatttaagaaaattacataatttagtgtaattataagtgt 177  Q
    |||||| ||||||||||| ||||||| |||||||| | |||||||||| ||||    
T  99892 cgacaccgataataattttagaaaataacataattcaatgtaattatatgtgt 99944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 179
Target Start/End: Complemental strand, 135378 - 135318
Alignment:
Q  119 acacgccgacacggataataatttaagaaaattacataatttagtgtaattataagtgtcg 179  Q
    |||| ||||||| | ||||||||| ||||||| ||||||||  ||||||||||| ||||||    
T  135378 acacaccgacactgctaataatttgagaaaatcacataattctgtgtaattatatgtgtcg 135318  T

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Target: scaffold0008 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 178
Target Start/End: Complemental strand, 263423 - 263379
Alignment:
Q  134 taataatttaagaaaattacataatttagtgtaattataagtgtc 178  Q
    ||||||||| ||||||  |||||||| ||||||||||||||||||    
T  263423 taataatttgagaaaaccacataattcagtgtaattataagtgtc 263379  T

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