View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19357_low_3 (Length: 322)
Name: NF19357_low_3
Description: NF19357
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19357_low_3 |
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Alignment Details
Target: chr8 (Bit Score: 282; Significance: 1e-158; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 16 - 301
Target Start/End: Complemental strand, 26607493 - 26607208
Alignment:
| Q |
16 |
atgcaaaaagaatttaaggcattgaagtaatattaataaagcaagattcatatgaaacatatgtatgtctgatctacatcataatgggtataatatgagc |
115 |
Q |
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| T |
26607493 |
atgcaaaaagaatgtaaggcattgaagtaatattaataaagcaagattcatatgaaacatatgtatgtctgatctacatcataatgggtataatatgagc |
26607394 |
T |
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| Q |
116 |
aatggaaaagcctatttgtatattaataacttcataacactcaacttggtaatcctaatcattaattatttagtcttccaatcggaagaaaatttggctt |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26607393 |
aatggaaaagcctatttgtatattaataacttcataacactcaacttggtaatcctaatcattaattatttagtcttccaatcggaagaaaatttggctt |
26607294 |
T |
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| Q |
216 |
ataaatgactatctggcaacgaaataaatcttctttaacaccaatctccttgatcattccattacttaaattcaaacagatcactt |
301 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26607293 |
ataaatgactatctggcaacgaaataaatcttctttaacaccaatctccttgatcattccattacttaaattcaaacagatcactt |
26607208 |
T |
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