View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19358_high_113 (Length: 269)
Name: NF19358_high_113
Description: NF19358
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19358_high_113 |
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Alignment Details
Target: chr3 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 16 - 258
Target Start/End: Original strand, 32951640 - 32951882
Alignment:
| Q |
16 |
aaaacttcttattataaacataaaacatgcatgatcaatataattctagtaaagatatttaatgaaaagtaaagatagatatcaatagcaacagatgaat |
115 |
Q |
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|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32951640 |
aaaacttcttattataaacataaaacatgcatgatcggtataattctagtaaagatatttaatgaaaagtaaagatagatatcaatagcaacagatgaat |
32951739 |
T |
|
| Q |
116 |
aaataatgnnnnnnngaaatgtaccaaatctcacattataaaacacagaatgtcatcgcttgaaagagaaaatagaattaagtgtttgtttggtattgtg |
215 |
Q |
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|||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32951740 |
aaataatgaaaaaaagaaatgtaccaaaggtcacattataaaacacagaatgtcatcgcttgaaagagaaaatagaattaagtgtttgtttggtattgtg |
32951839 |
T |
|
| Q |
216 |
gtaaatatgtaaaaattacggtgagtcatcatgctttggttca |
258 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||| |
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| T |
32951840 |
gtaaatatgtaaaaattacggtgagtagtcatgctttggttca |
32951882 |
T |
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