View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19358_high_114 (Length: 267)
Name: NF19358_high_114
Description: NF19358
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19358_high_114 |
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Alignment Details
Target: chr5 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 19 - 251
Target Start/End: Original strand, 4831108 - 4831340
Alignment:
| Q |
19 |
ccattcataaatattcctccacaagaccttgttgctaatgctggattgtgccttctttaccatttaccaaaccctaataataatgcttttgcttccttca |
118 |
Q |
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| T |
4831108 |
ccattcataaatattcctccacaagaccttgttgctaatgctggattgtgccttctttaccatttaccaaaccctaataataatgcttttgcttccttca |
4831207 |
T |
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| Q |
119 |
atagttctagtcctaatggagaatctccttctacttttctctcaatctcatcatcaacatcttatcctccaaataatttgatgatgcaaatgcaaacttg |
218 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
4831208 |
atagttctagtcctaatggagaatctccttctacttttctctcaatctcatcatcaacatcttatcctccaaataatttgatgatgcaaatgcaagcttg |
4831307 |
T |
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| Q |
219 |
ttctccatcttttaattttcaagtggataattc |
251 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
4831308 |
ttctccatcttttaattttcaagtggataattc |
4831340 |
T |
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