View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19358_high_142 (Length: 239)
Name: NF19358_high_142
Description: NF19358
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19358_high_142 |
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Alignment Details
Target: chr8 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 47 - 221
Target Start/End: Complemental strand, 7950878 - 7950704
Alignment:
| Q |
47 |
aacaaaaatagatcatattatatagaagaaacttttatcaatatcatatattaaggcattctagaagaataatcaccaaatggctcgcaaagcaaacatt |
146 |
Q |
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| T |
7950878 |
aacaaaaatagagcatattatatagaagaaacttttatcaatatcatatattaaggcattctagaagaataatcaccaaatggctcgcaaagcaaacatt |
7950779 |
T |
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| Q |
147 |
tattataatcctaccagatatctaagaaatctaaaggaagatttttatttgaagtattagatgcatcatgtcatg |
221 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
7950778 |
tattataatcctaccagatatctaagaaatctaaaggaagatttttatttaaagtattagatgcatcatgtcatg |
7950704 |
T |
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