View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19358_high_154 (Length: 228)
Name: NF19358_high_154
Description: NF19358
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19358_high_154 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 7 - 228
Target Start/End: Complemental strand, 30636096 - 30635875
Alignment:
| Q |
7 |
cttttggctttttatttgctctttattctgaaaaatagctttcagaagttatctccccaagttttttaaaacacaaaaatgtcatttagaagttatctct |
106 |
Q |
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| T |
30636096 |
cttttggctttttatttgctctttattctgaaaaattgctttcagaagttatctcccgaagtttcttaaaacacaaaaatgtcatttagaagttatctct |
30635997 |
T |
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| Q |
107 |
agaaaagtttgcgtatttgtgggggttaaaagagcaatcctttgaaagtgtttggagttggagaaatatgactcaaactttttgagtaggaattcatcat |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30635996 |
agaaaagtttgcgtatttgtgggggttaaaagagcaatcctttgaaagtgtttggagttggagaaatatgactcaaactttttgagtaggaattcatcat |
30635897 |
T |
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| Q |
207 |
cttttaggaatttttattcttt |
228 |
Q |
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|||||||||||||||||||||| |
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| T |
30635896 |
cttttaggaatttttattcttt |
30635875 |
T |
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