View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19358_high_57 (Length: 369)
Name: NF19358_high_57
Description: NF19358
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19358_high_57 |
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Alignment Details
Target: chr4 (Bit Score: 308; Significance: 1e-173; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 14 - 357
Target Start/End: Original strand, 47737170 - 47737513
Alignment:
| Q |
14 |
agattgacggatcttgatgaaaaacttacgtccaaaccttcaaagtttcattatgccaacgaaagagactgaagaaagcttctttcaaaggccaattggc |
113 |
Q |
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| T |
47737170 |
agattgacagatcttgatgaaaaacttacgtccaaacattcaaagtttcattatgccaacgaaagagactgaagaaagcttctttcaaaggccaattggc |
47737269 |
T |
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| Q |
114 |
tctataataacgtaaaatatattcattatccgtcctataattcggtagctctataaacgagacaggagcgtaacgttgttgttttcctttgttccgatca |
213 |
Q |
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| T |
47737270 |
tctataataacgtaaaatatattcattatccttcatataattcggtagttccataaacgagacaagagagtaacgttgttgttttcctttgttccgatca |
47737369 |
T |
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| Q |
214 |
tgcgacatctttatattatccttggactgtgtaaaagacaaggtttcatcagtttctttacctttgttcctcttgacaacacaatttgtctcacaatagt |
313 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47737370 |
tgcgacatctttatattatccttggactgtgtaaaagacaaggtttcatcagtttctttacctttgttcctcttgacaacacaatttgtctcacaatagt |
47737469 |
T |
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| Q |
314 |
tcatctccgttttggtaattgtttttgttttctatgattatgtc |
357 |
Q |
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| T |
47737470 |
tcatctccgttttggtaattgtttttgttttctatgatgatgtc |
47737513 |
T |
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