View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19358_high_94 (Length: 295)
Name: NF19358_high_94
Description: NF19358
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19358_high_94 |
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Alignment Details
Target: chr8 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 13 - 276
Target Start/End: Original strand, 5819284 - 5819546
Alignment:
| Q |
13 |
aatataaccatatcgatgagaaacatgttgaaggaaaaatgagtacctcattatttatggggtgaagcaaccattattgttgcatatctcgtaaataggt |
112 |
Q |
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| T |
5819284 |
aatataaccatat-gatgagaaacatgttgaaggaaaaatgagtacctcattatttatggggtgaagcaaccattattgttgcatatctcgtaaataggt |
5819382 |
T |
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| Q |
113 |
gtcctactaagaagttactaagaaaaacacctgaagaagcttggtcaataatcaagccatgtgtgtaacacctcaaaatatttggttcattatgtaacac |
212 |
Q |
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|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5819383 |
gtcctactaagaagttactaagaaaaacacttgaagaagcttggtcaataatcaagccatgtgtgtaacacctcaaaatatttggttcattatgtaacac |
5819482 |
T |
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| Q |
213 |
ctcaaaggttgaatgactataaaagattttctgactcaataatgaatgatgatggtgagcttgt |
276 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5819483 |
ctcaaaggttgaatgactataaaagattttctgactcaataatgaatgatgatggtgagcttgt |
5819546 |
T |
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