View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19358_low_1 (Length: 831)

Name: NF19358_low_1
Description: NF19358
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19358_low_1
NF19358_low_1
[»] chr1 (35 HSPs)
chr1 (113-815)||(31526429-31527131)
chr1 (311-817)||(32593268-32593771)
chr1 (311-817)||(51823505-51824023)
chr1 (342-814)||(37030012-37030469)
chr1 (154-307)||(32593994-32594148)
chr1 (17-114)||(31526172-31526269)
chr1 (113-161)||(33194008-33194056)
chr1 (113-158)||(8574135-8574180)
chr1 (113-158)||(39728343-39728388)
chr1 (115-158)||(31528738-31528781)
chr1 (116-158)||(25298166-25298208)
chr1 (113-158)||(10172408-10172453)
chr1 (115-156)||(14594554-14594595)
chr1 (113-158)||(34969253-34969298)
chr1 (113-158)||(38619541-38619586)
chr1 (118-158)||(48715781-48715821)
chr1 (115-158)||(11409104-11409147)
chr1 (115-154)||(50884554-50884593)
chr1 (113-159)||(4242185-4242231)
chr1 (113-159)||(5935669-5935715)
chr1 (116-158)||(12780346-12780388)
chr1 (113-159)||(13057194-13057240)
chr1 (113-159)||(52043498-52043544)
chr1 (113-158)||(115785-115830)
chr1 (113-158)||(773079-773124)
chr1 (113-158)||(925013-925058)
chr1 (117-158)||(7548580-7548621)
chr1 (113-158)||(12265012-12265057)
chr1 (113-158)||(15476544-15476589)
chr1 (113-158)||(21334934-21334979)
chr1 (113-158)||(27926558-27926603)
chr1 (113-154)||(36604631-36604672)
chr1 (113-158)||(36866475-36866520)
chr1 (113-158)||(43723784-43723829)
chr1 (113-158)||(44667853-44667898)
[»] chr3 (47 HSPs)
chr3 (318-817)||(49206754-49207261)
chr3 (311-817)||(49211326-49211835)
chr3 (330-817)||(49201810-49202306)
chr3 (311-817)||(49186811-49187326)
chr3 (315-817)||(49190519-49191017)
chr3 (113-159)||(13875613-13875659)
chr3 (113-158)||(611928-611973)
chr3 (113-158)||(3890677-3890722)
chr3 (113-158)||(17476484-17476529)
chr3 (113-158)||(18388690-18388735)
chr3 (113-158)||(35379979-35380024)
chr3 (115-159)||(22152375-22152419)
chr3 (116-158)||(7777682-7777724)
chr3 (116-158)||(22258243-22258285)
chr3 (221-263)||(49190375-49190417)
chr3 (113-158)||(2363450-2363495)
chr3 (113-158)||(3889875-3889920)
chr3 (113-158)||(3899692-3899737)
chr3 (113-158)||(19245446-19245491)
chr3 (113-158)||(21030490-21030535)
chr3 (113-158)||(21078759-21078804)
chr3 (113-154)||(30805800-30805841)
chr3 (113-158)||(31766569-31766614)
chr3 (113-161)||(47787172-47787220)
chr3 (187-274)||(49211116-49211205)
chr3 (112-159)||(12565405-12565452)
chr3 (112-159)||(13259804-13259851)
chr3 (115-154)||(25842463-25842502)
chr3 (232-303)||(49201671-49201742)
chr3 (113-159)||(14265910-14265956)
chr3 (113-159)||(19420049-19420095)
chr3 (116-158)||(45701832-45701874)
chr3 (113-159)||(48796294-48796340)
chr3 (113-159)||(54768061-54768107)
chr3 (113-158)||(7252200-7252245)
chr3 (113-158)||(7429914-7429959)
chr3 (113-158)||(8149449-8149494)
chr3 (113-154)||(9861864-9861905)
chr3 (113-158)||(18020543-18020588)
chr3 (113-158)||(18540471-18540516)
chr3 (118-159)||(21970159-21970200)
chr3 (118-159)||(21992595-21992636)
chr3 (117-158)||(26130894-26130935)
chr3 (113-158)||(27398299-27398344)
chr3 (113-158)||(50483516-50483561)
chr3 (113-158)||(51006289-51006334)
chr3 (113-154)||(53162137-53162178)
[»] chr8 (40 HSPs)
chr8 (388-817)||(26755869-26756304)
chr8 (206-284)||(26755727-26755806)
chr8 (113-158)||(2691946-2691991)
chr8 (113-158)||(24023202-24023247)
chr8 (113-158)||(30264127-30264172)
chr8 (113-158)||(32173115-32173160)
chr8 (113-161)||(3825312-3825360)
chr8 (115-158)||(15837402-15837445)
chr8 (115-161)||(18994651-18994697)
chr8 (116-158)||(27022740-27022782)
chr8 (113-159)||(28205550-28205596)
chr8 (113-159)||(41941168-41941214)
chr8 (113-158)||(4430117-4430162)
chr8 (113-158)||(13469288-13469333)
chr8 (113-158)||(15044190-15044235)
chr8 (113-158)||(33192430-33192475)
chr8 (113-158)||(41666656-41666701)
chr8 (115-159)||(288897-288941)
chr8 (118-158)||(1170619-1170659)
chr8 (115-159)||(9503099-9503143)
chr8 (119-159)||(33653582-33653622)
chr8 (115-158)||(11929541-11929584)
chr8 (115-158)||(11941667-11941710)
chr8 (113-160)||(12721810-12721857)
chr8 (115-158)||(15898884-15898927)
chr8 (115-158)||(18638329-18638372)
chr8 (113-152)||(24852595-24852634)
chr8 (113-159)||(5626054-5626100)
chr8 (113-159)||(10865112-10865158)
chr8 (113-159)||(34966966-34967012)
chr8 (116-154)||(38283782-38283820)
chr8 (113-158)||(1372709-1372754)
chr8 (117-158)||(11352929-11352970)
chr8 (113-158)||(12470951-12470996)
chr8 (113-158)||(13369209-13369254)
chr8 (113-158)||(18279273-18279318)
chr8 (113-158)||(24688743-24688787)
chr8 (113-154)||(25722873-25722914)
chr8 (113-158)||(30800508-30800553)
chr8 (113-158)||(43922340-43922385)
[»] chr4 (30 HSPs)
chr4 (311-422)||(52267388-52267503)
chr4 (115-158)||(12214476-12214519)
chr4 (113-158)||(35595510-35595555)
chr4 (113-158)||(55232532-55232577)
chr4 (113-158)||(56085005-56085050)
chr4 (115-159)||(627945-627989)
chr4 (115-158)||(47045074-47045117)
chr4 (116-158)||(2186434-2186476)
chr4 (113-158)||(894042-894087)
chr4 (113-158)||(2548539-2548584)
chr4 (113-158)||(7712715-7712760)
chr4 (113-158)||(13781595-13781640)
chr4 (113-158)||(20702643-20702688)
chr4 (113-158)||(23091220-23091265)
chr4 (113-158)||(26878525-26878570)
chr4 (113-158)||(35447577-35447622)
chr4 (113-158)||(38740694-38740739)
chr4 (113-158)||(49574999-49575044)
chr4 (115-153)||(5190557-5190595)
chr4 (116-158)||(21122342-21122384)
chr4 (116-158)||(37143228-37143270)
chr4 (113-159)||(44470351-44470397)
chr4 (113-158)||(5049148-5049193)
chr4 (113-154)||(9170822-9170862)
chr4 (113-154)||(15849674-15849715)
chr4 (113-158)||(17702476-17702521)
chr4 (117-158)||(21054012-21054053)
chr4 (113-158)||(21796418-21796463)
chr4 (118-158)||(28808863-28808904)
chr4 (113-154)||(31139056-31139097)
[»] scaffold0003 (1 HSPs)
scaffold0003 (113-156)||(227375-227418)
[»] scaffold0031 (1 HSPs)
scaffold0031 (113-159)||(46978-47024)
[»] scaffold0445 (1 HSPs)
scaffold0445 (113-158)||(4949-4994)
[»] chr7 (31 HSPs)
chr7 (113-154)||(21993121-21993162)
chr7 (113-158)||(23896780-23896825)
chr7 (113-158)||(25834712-25834757)
chr7 (113-158)||(27509761-27509806)
chr7 (113-158)||(35446530-35446575)
chr7 (113-161)||(47901849-47901897)
chr7 (113-156)||(10040522-10040565)
chr7 (113-159)||(1748534-1748580)
chr7 (113-159)||(9412781-9412827)
chr7 (113-159)||(21081558-21081604)
chr7 (113-158)||(1787075-1787120)
chr7 (113-158)||(12170653-12170698)
chr7 (113-158)||(22479721-22479765)
chr7 (113-158)||(23050985-23051030)
chr7 (113-158)||(23774779-23774824)
chr7 (113-158)||(39435083-39435128)
chr7 (113-158)||(41747643-41747688)
chr7 (113-158)||(48103589-48103634)
chr7 (113-153)||(581955-581995)
chr7 (113-153)||(20692047-20692087)
chr7 (113-153)||(20697525-20697565)
chr7 (115-159)||(35213852-35213896)
chr7 (115-153)||(23160915-23160953)
chr7 (116-158)||(39459950-39459992)
chr7 (113-158)||(8790921-8790966)
chr7 (113-158)||(9334822-9334867)
chr7 (113-158)||(11573470-11573515)
chr7 (113-154)||(27513260-27513301)
chr7 (113-158)||(29366054-29366099)
chr7 (113-158)||(34729302-34729347)
chr7 (113-154)||(47741512-47741553)
[»] chr5 (26 HSPs)
chr5 (113-158)||(831806-831851)
chr5 (113-158)||(4326250-4326295)
chr5 (113-158)||(17210786-17210831)
chr5 (113-158)||(36337495-36337540)
chr5 (115-153)||(24009519-24009557)
chr5 (113-158)||(2530360-2530405)
chr5 (113-158)||(5026321-5026366)
chr5 (113-158)||(6226106-6226151)
chr5 (113-158)||(24836886-24836931)
chr5 (113-158)||(27905101-27905146)
chr5 (113-158)||(28868224-28868269)
chr5 (113-154)||(36267294-36267335)
chr5 (113-158)||(42027550-42027595)
chr5 (113-161)||(12083119-12083167)
chr5 (114-158)||(14000586-14000630)
chr5 (113-156)||(17915973-17916016)
chr5 (116-158)||(7464028-7464070)
chr5 (116-154)||(7938035-7938073)
chr5 (116-154)||(33629293-33629331)
chr5 (113-154)||(1134560-1134601)
chr5 (113-158)||(8786615-8786660)
chr5 (113-158)||(33697210-33697255)
chr5 (116-153)||(39850964-39851001)
chr5 (113-154)||(40493983-40494024)
chr5 (113-158)||(40716343-40716388)
chr5 (113-158)||(42097609-42097654)
[»] chr2 (29 HSPs)
chr2 (113-158)||(24005002-24005047)
chr2 (119-158)||(24791811-24791850)
chr2 (116-158)||(5880911-5880953)
chr2 (113-159)||(20718144-20718190)
chr2 (113-159)||(34576315-34576361)
chr2 (113-159)||(40301520-40301566)
chr2 (113-159)||(42185928-42185974)
chr2 (113-159)||(42949850-42949896)
chr2 (113-158)||(9779612-9779657)
chr2 (113-154)||(32689959-32690000)
chr2 (113-158)||(33133579-33133624)
chr2 (113-158)||(34063345-34063390)
chr2 (113-158)||(37610117-37610162)
chr2 (113-158)||(37867703-37867748)
chr2 (121-158)||(38147741-38147778)
chr2 (113-158)||(38692706-38692751)
chr2 (113-158)||(39271512-39271557)
chr2 (113-158)||(41122789-41122834)
chr2 (118-158)||(37498465-37498505)
chr2 (115-158)||(30874372-30874415)
chr2 (113-152)||(42082719-42082758)
chr2 (113-159)||(3357258-3357304)
chr2 (117-159)||(7929468-7929510)
chr2 (116-158)||(19039943-19039985)
chr2 (113-158)||(1111211-1111255)
chr2 (113-158)||(15265690-15265735)
chr2 (113-154)||(17372530-17372571)
chr2 (113-154)||(31593413-31593454)
chr2 (113-158)||(42060311-42060356)
[»] chr6 (14 HSPs)
chr6 (115-158)||(31203946-31203989)
chr6 (113-158)||(10460230-10460275)
chr6 (118-163)||(14439729-14439774)
chr6 (120-161)||(22534978-22535019)
chr6 (113-158)||(26252855-26252900)
chr6 (115-159)||(11646654-11646698)
chr6 (113-161)||(24062726-24062774)
chr6 (113-153)||(31861968-31862008)
chr6 (124-159)||(10587586-10587621)
chr6 (120-154)||(10266873-10266907)
chr6 (70-103)||(3823956-3823989)
chr6 (113-158)||(3833790-3833835)
chr6 (117-158)||(14965349-14965390)
chr6 (113-154)||(17353226-17353267)
[»] scaffold0583 (1 HSPs)
scaffold0583 (113-159)||(955-1001)
[»] scaffold0097 (1 HSPs)
scaffold0097 (113-159)||(21981-22027)
[»] scaffold0137 (1 HSPs)
scaffold0137 (113-158)||(6836-6881)
[»] scaffold0063 (1 HSPs)
scaffold0063 (113-158)||(33025-33070)
[»] scaffold1379 (1 HSPs)
scaffold1379 (118-158)||(1581-1621)
[»] scaffold0294 (1 HSPs)
scaffold0294 (113-153)||(1662-1702)
[»] scaffold0081 (1 HSPs)
scaffold0081 (114-158)||(12434-12478)
[»] scaffold0285 (1 HSPs)
scaffold0285 (113-158)||(16535-16580)
[»] scaffold0193 (1 HSPs)
scaffold0193 (113-158)||(21420-21465)
[»] scaffold0068 (1 HSPs)
scaffold0068 (115-156)||(57528-57569)
[»] scaffold0022 (1 HSPs)
scaffold0022 (113-158)||(66215-66260)


Alignment Details
Target: chr1 (Bit Score: 649; Significance: 0; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 649; E-Value: 0
Query Start/End: Original strand, 113 - 815
Target Start/End: Original strand, 31526429 - 31527131
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaataagaaaaaacacaatgtaatgttagtcagtccttctcatgattttagttttta 212  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||||||||||||||    
T  31526429 actaaaaatataaatgtttgttgctttcaatttataacaaaccaaataagaaaaaaca--atgtaatgttagtcggtccttctcatgattttagttttta 31526526  T
Q  213 ttgcaaacattccattcataaaataccaa---gcatataaaattgtaaattaaattagcatataatataagattttgaacttaaaactactaaattacta 309  Q
    |||||||| ||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  31526527 ttgcaaacgttccattcataaaataccaattagcatataaaattgtaaattaaattagcatataatataagattttgaacttaaa-ctactaaattacta 31526625  T
Q  310 aactactataaacctaatacttgcatcctcctaattaagagcttttgtctgataaggttcccatccaagcaggaggcaacatgcctgtttgctcatggac 409  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  31526626 aactactataaacctaatacttgcatcctcctaattaagagcttttgtctgataaggttcctatccaagcaggaggcaacatgcctgtttgctcatggac 31526725  T
Q  410 agtcttaaacaaaggtggcaacatcttgtaaacaccagcaacctctttcatacccatagaaccttcgcctccattgtcacctccattagtccaaatacta 509  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31526726 agtcttaaacaaaggtggcaacatcttgtaaacaccagcaacctctttcatacccatagaaccttcgcctccattgtcacctccattagtccaaatacta 31526825  T
Q  510 atcttaggttcaagtccgcgtaccgcctcagcattaatcttagccatctcttgaaacatgccaccatttatcatcaagtaatcccttagagctgtgtagt 609  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31526826 atcttaggttcaagtccacgtaccgcctcagcattaatcttagccatctcttgaaacatgccaccatttatcatcaagtaatcccttagagctgtgtagt 31526925  T
Q  610 cgtttccaagtgcattgagaagtgtacttacatacactccttgagcattcccaagtgtcacaatcccctctgcctcttttttctttgcatatagctccgt 709  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  31526926 cgtttccaagtgcattgagaagtgtacttacatacactccttgagcattcccaagtgtcacaatcccctctgcctcttttttctttgcatatagctccgc 31527025  T
Q  710 ttcggctgcttgcttgcgcgcataaaatgttgcatctgacaatgctttctgtgcttctgcctctgccttcttctcatacagaattgcttctgcttctttt 809  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31527026 ttcggctgcttgcttgcgcgcataaaatgttgcatctgacaatgctttctgtgcttctgcctctgccttcttctcatacagaattgcttctgcttctttt 31527125  T
Q  810 tgtttc 815  Q
    ||||||    
T  31527126 tgtttc 31527131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 408; E-Value: 0
Query Start/End: Original strand, 311 - 817
Target Start/End: Complemental strand, 32593771 - 32593268
Alignment:
Q  311 actactataaacctaatacttgcatcctcctaattaagagcttttgtctgataaggttcccatccaagcaggaggcaacatgcctgtttgctcatggaca 410  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32593771 actactataaacctaatacttgcatcctcctaattaagagcttttgtcggataaggttcccatccaagcaggaggcaacatgcctgtttgctcatggaca 32593672  T
Q  411 gtcttaaacaaaggtggcaacatcttgtaaacaccagcaacctctttcatacccatagaaccttcgcctccattgtcacctccattagtccaaatactaa 510  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||||   |  |||  | ||||||||||||||||||||||    
T  32593671 gtcttaaacagaggtggcagcatcttgtaaacaccagcaacctctttcatgcccatagaaccttccgtt--attc-cgcctccattagtccaaatactaa 32593575  T
Q  511 tcttaggttcaagtccgcgtaccgcctcagcattaatcttagccatctcttgaaacatgccaccatttatcatcaagtaatcccttagagctgtgtagtc 610  Q
    ||||||||||||||||  |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32593574 tcttaggttcaagtccatgtactgcctcagcattgatcttagccatctcttgaaacatgccaccatttatcatcaagtaatcccttagagctgtgtagtc 32593475  T
Q  611 gtttccaagtgcattgagaagtgtacttacatacactccttgagcattcccaagtgtcacaatcccctctgcctcttttttctttgcatatagctccgtt 710  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| | |    
T  32593474 gtttccaagtgcattgagaagtgtacttacatacactccttgagcattcccaagtgtcacaatcccttctgcctcttttttctttgcgtatagctctgct 32593375  T
Q  711 tcggctgcttgcttgcgcgcataaaatgttgcatctgacaatgctttctgtgcttctgcctctgccttcttctcatacagaattgcttctgcttcttttt 810  Q
    || |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  32593374 tcagctgcttgcttgcgcgcataaaatgttgcatctgccaatgctttctgtgcttctgcctctgccttcttctcatacagaattgcttctgattcttttt 32593275  T
Q  811 gtttctt 817  Q
    |||||||    
T  32593274 gtttctt 32593268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 401; E-Value: 0
Query Start/End: Original strand, 311 - 817
Target Start/End: Original strand, 51823505 - 51824023
Alignment:
Q  311 actactataaacctaatactt---gcatcctcctaattaagagcttttgtctgataaggttcccatccaagcaggaggcaacatgcctgtttgctcatgg 407  Q
    |||||||||||||||||||||   ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  51823505 actactataaacctaatacttcttgcatcctcctaattaagagcttttgtcggataaggttcccatccaagcaggaggcaacatgcctgtttgctcatgg 51823604  T
Q  408 acagtcttaaacaaaggtggcaacatcttgtaaacaccagcaacctctttcatacccatagaaccttcg---------cctccattgtcacctccattag 498  Q
    |||||||| |||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||         ||||||||||| ||||||||||    
T  51823605 acagtcttgaacagaggtggcagcatcttgtagacaccagcaacctctttcatacccatagaaccttcggctattccgcctccattgtcccctccattag 51823704  T
Q  499 tccaaatactaatcttaggttcaagtccgcgtaccgcctcagcattaatcttagccatctcttgaaacatgccaccatttatcatcaagtaatcccttag 598  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51823705 tccaaatactaatcttaggttcaagtccacgtactgcctcagcattaatcttagccatctcttgaaacatgccaccatttatcatcaagtaatcccttag 51823804  T
Q  599 agctgtgtagtcgtttccaagtgcattgagaagtgtacttacatacactccttgagcattcccaagtgtcacaatcccctctgcctcttttttctttgca 698  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||     
T  51823805 agctgtgtagtcgtttccaagtgcattgagaagtgtacttacatacgctccttgagcatttccaagtgtcacaatcccctctgcctcttttttctttgcg 51823904  T
Q  699 tatagctccgtttcggctgcttgcttgcgcgcataaaatgttgcatctgacaatgctttctgtgcttctgcctctgccttcttctcatacagaattgctt 798  Q
    ||||| || | ||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  51823905 tatagatctgcttcagctgcttgcttgcacgcataaaatgttgcatctgccaatgctttctgtgcttctgcctctgccttcttctcgtacagaattgctt 51824004  T
Q  799 ctgcttctttttgtttctt 817  Q
    |||||||||||||||||||    
T  51824005 ctgcttctttttgtttctt 51824023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 342 - 814
Target Start/End: Original strand, 37030012 - 37030469
Alignment:
Q  342 aattaagagcttttgtctgataaggttcccatccaagcaggaggcaacatgcctgtttgctcatggacagtcttaaacaaaggtggcaacatcttgtaaa 441  Q
    ||||||||| ||||||| |  |||  ||||||||||||||| || ||||| || |||||||||||||||||||||||||||||||||||||||||||| |    
T  37030012 aattaagagtttttgtcaggcaagactcccatccaagcaggtggtaacattcccgtttgctcatggacagtcttaaacaaaggtggcaacatcttgtaga 37030111  T
Q  442 caccagcaacctctttcatacccatagaaccttcgcctccattgtcacctccattagtccaaatactaatcttaggttcaagtccgcgtaccgcctcagc 541  Q
    |||||||||| |||||||||||      |||| |          ||||| |||||||||||||||||||||||||| |||||||| ||||  ||||| ||    
T  37030112 caccagcaacttctttcatacc------acctgct---------tcacccccattagtccaaatactaatcttaggctcaagtcctcgtattgcctcggc 37030196  T
Q  542 attaatcttagccatctcttgaaacatgccaccatttatcatcaagtaatcccttagagctgtgtagtcgtttccaagtgcattgagaagtgtacttaca 641  Q
     ||||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||| ||||||||    
T  37030197 gttaatcttagcaatctcttgaaacatgccaccatttatcatcaagtaatccctcacagctgtgtagtcgtttccaagtgcattaagaagtttacttaca 37030296  T
Q  642 tacactccttgagcattcccaagtgtcacaatcccctctgcctcttttttctttgcatatagctccgtttcggctgcttgcttgcgcgcataaaatgttg 741  Q
    ||||| |||||||| |  |||| ||||||||| ||||||||||| |||||||||||||| ||||| | ||| |||||||| ||||  |||||||||||||    
T  37030297 tacaccccttgagcttgtccaactgtcacaattccctctgcctcctttttctttgcataaagctctgcttcagctgcttgtttgctagcataaaatgttg 37030396  T
Q  742 catctgacaatgctttctgtgcttctgcctctgccttcttctcatacagaattgcttctgcttctttttgttt 814  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  37030397 catctgccgatgctttctgtgcttctgcctctgccttcttctcatacagaattgcttctgcctctttctgttt 37030469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 154 - 307
Target Start/End: Complemental strand, 32594148 - 32593994
Alignment:
Q  154 ccaaataagaaaaaac-acaatgtaatgttagtcagtccttctcatgattttagtttttattgcaaacattccattcataaaataccaagcatataaaat 252  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||  |||||| |||||||||| ||||||||||||||||||||||||| ||||||    
T  32594148 ccaaataagaaaaaaccacaatgtaatgttagtcagtccttttcatgagcttagttgttattgcaaaaattccattcataaaataccaagcatgtaaaat 32594049  T
Q  253 tgtaaattaaattagcatataatataagattttgaacttaaaactactaaattac 307  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  32594048 tgtaaattaaattagcatataatataagattttgaacttataactactaaattac 32593994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 17 - 114
Target Start/End: Original strand, 31526172 - 31526269
Alignment:
Q  17 aacaattgcataacattaaacttgatgcacccaattaatgatcgatgaagcaaatgtttatgtggtcacaaccacaaattaaaatgatttagccccac 114  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31526172 aacaattacataacattaaacttgatgcacccaattaatgatcgatgaagcaaatgtttatgtggtcacaaccacaaattaaaatgatttagccccac 31526269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 113 - 161
Target Start/End: Complemental strand, 33194056 - 33194008
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaataa 161  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  33194056 actaaaaaaataaatgtttgttgctttcaatttataacaaaccaaataa 33194008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 8574180 - 8574135
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||    
T  8574180 actaaaaatataaatgtttgttgctttcaagttataacaaaccaaa 8574135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 39728388 - 39728343
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||    
T  39728388 actaaaaatataaatgtttgttgctttcaagttataacaaaccaaa 39728343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 115 - 158
Target Start/End: Complemental strand, 31528781 - 31528738
Alignment:
Q  115 taaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||| ||||||| |||||||||||||||    
T  31528781 taaaaatataaatgtttgttgctttcaagttataacaaaccaaa 31528738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 158
Target Start/End: Complemental strand, 25298208 - 25298166
Alignment:
Q  116 aaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    ||||||||||||||||||| ||||||| |||||||||||||||    
T  25298208 aaaaatataaatgtttgttgctttcaagttataacaaaccaaa 25298166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 10172453 - 10172408
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||| ||||||||||||||||| |||||||||||||||||| ||||    
T  10172453 actacaaatataaatgtttgttgctttcaatttataacaaatcaaa 10172408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 156
Target Start/End: Original strand, 14594554 - 14594595
Alignment:
Q  115 taaaaatataaatgtttgttactttcaatttataacaaacca 156  Q
    |||||||||||||||||||| ||||||| |||||||||||||    
T  14594554 taaaaatataaatgtttgttgctttcaaattataacaaacca 14594595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 34969253 - 34969298
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    ||||||||||||||||||| || ||||||| |||||||||||||||    
T  34969253 actaaaaatataaatgtttatttctttcaagttataacaaaccaaa 34969298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 38619541 - 38619586
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||||| ||||||| || ||||||||||||    
T  38619541 actaaaaatataaatgtttgttgctttcaagttttaacaaaccaaa 38619586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 158
Target Start/End: Original strand, 48715781 - 48715821
Alignment:
Q  118 aaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    ||||||||||||||||||||||||| |||||| ||||||||    
T  48715781 aaatataaatgtttgttactttcaagttataaaaaaccaaa 48715821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 158
Target Start/End: Complemental strand, 11409147 - 11409104
Alignment:
Q  115 taaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||||||||||| ||| |||||| ||||    
T  11409147 taaaaatataaatgtttgttactttcaaattaaaacaaatcaaa 11409104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 154
Target Start/End: Original strand, 50884554 - 50884593
Alignment:
Q  115 taaaaatataaatgtttgttactttcaatttataacaaac 154  Q
    |||||||||||||||||||| ||||||| |||||||||||    
T  50884554 taaaaatataaatgtttgttgctttcaagttataacaaac 50884593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 159
Target Start/End: Complemental strand, 4242231 - 4242185
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaat 159  Q
    ||||||||||||||||||||||  |||||| |||||||||| |||||    
T  4242231 actaaaaatataaatgtttgttgttttcaagttataacaaatcaaat 4242185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 159
Target Start/End: Complemental strand, 5935715 - 5935669
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaat 159  Q
    |||||||||||||||||||||| ||||||| ||||| |||| |||||    
T  5935715 actaaaaatataaatgtttgttgctttcaagttatagcaaatcaaat 5935669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 158
Target Start/End: Complemental strand, 12780388 - 12780346
Alignment:
Q  116 aaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    ||||||||||| ||||||| ||||||| |||||||||||||||    
T  12780388 aaaaatataaacgtttgttgctttcaagttataacaaaccaaa 12780346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 159
Target Start/End: Original strand, 13057194 - 13057240
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaat 159  Q
    |||||||||||||||||||||| ||||  | ||||||||||||||||    
T  13057194 actaaaaatataaatgtttgttgctttttagttataacaaaccaaat 13057240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 159
Target Start/End: Complemental strand, 52043544 - 52043498
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaat 159  Q
    |||||||||||||||||||||| ||||||| |||||| | |||||||    
T  52043544 actaaaaatataaatgtttgttgctttcaagttataaaagaccaaat 52043498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 115785 - 115830
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||||| ||||||| | |||||||| ||||    
T  115785 actaaaaatataaatgtttgttgctttcaagtaataacaaatcaaa 115830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 773079 - 773124
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||||| ||||||| |||||  ||||||||    
T  773079 actaaaaatataaatgtttgttgctttcaagttatattaaaccaaa 773124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 925013 - 925058
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    ||||||| |||||||||||||| ||||||| |||||||||| ||||    
T  925013 actaaaactataaatgtttgttgctttcaagttataacaaatcaaa 925058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 158
Target Start/End: Complemental strand, 7548621 - 7548580
Alignment:
Q  117 aaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    ||||||||||||||| || |||||||||||||| ||||||||    
T  7548621 aaaatataaatgtttattgctttcaatttataaaaaaccaaa 7548580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 12265057 - 12265012
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||||| ||||||| |||||| ||| ||||    
T  12265057 actaaaaatataaatgtttgttgctttcaagttataagaaatcaaa 12265012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 15476589 - 15476544
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    ||||||||||||||||||||||  |||||| |||||||||| ||||    
T  15476589 actaaaaatataaatgtttgttgttttcaagttataacaaatcaaa 15476544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 21334934 - 21334979
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    ||||||||||||||| ||||||  |||||| |||||||||||||||    
T  21334934 actaaaaatataaatttttgttgttttcaagttataacaaaccaaa 21334979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 27926603 - 27926558
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    ||||||||||| |||||||||| |||||| ||||||||||| ||||    
T  27926603 actaaaaatatcaatgtttgttgctttcattttataacaaatcaaa 27926558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 154
Target Start/End: Original strand, 36604631 - 36604672
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaac 154  Q
    ||||||||||||||||||| || ||||||| |||||||||||    
T  36604631 actaaaaatataaatgttttttgctttcaaattataacaaac 36604672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 36866520 - 36866475
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    ||||||||||||||||||||||  |||||  |||||||||||||||    
T  36866520 actaaaaatataaatgtttgttgttttcagattataacaaaccaaa 36866475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 43723784 - 43723829
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||||| ||||||| |||||| ||| ||||    
T  43723784 actaaaaatataaatgtttgttgctttcaagttataataaatcaaa 43723829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 44667898 - 44667853
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    ||||||||||||||||||||||  |||||| |||||||||| ||||    
T  44667898 actaaaaatataaatgtttgttgttttcaaattataacaaatcaaa 44667853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 312; Significance: 1e-175; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 312; E-Value: 1e-175
Query Start/End: Original strand, 318 - 817
Target Start/End: Original strand, 49206754 - 49207261
Alignment:
Q  318 taaacctaatacttgcatcctcctaattaagagcttttgtctgataaggttcccatccaagcaggaggcaacatgcctgtttgctcatggacagtcttaa 417  Q
    ||||||||||||||||||| ||| ||||||||| ||||||| | ||| | |||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  49206754 taaacctaatacttgcatc-tccaaattaagagtttttgtcaggtaaagatcccatccaagccggaggaaacatgcctgtttgctcatggacagtcttaa 49206852  T
Q  418 acaaaggtggcaacatcttgtaaacaccagcaacctctttcatacccatagaaccttcg------cctccattgt---cacctccattagtccaaatact 508  Q
    ||| ||| |||||||||||||| ||||||||||| |||||||||||||| | ||||||       || ||||| |   |||| |||||||||||||||||    
T  49206853 acagaggcggcaacatcttgtagacaccagcaacttctttcatacccatggcaccttcagttattcccccattattatcaccaccattagtccaaatact 49206952  T
Q  509 aatcttaggttcaagtccgcgtaccgcctcagcattaatcttagccatctcttgaaacatgccaccatttatcatcaagtaatcccttagagctgtgtag 608  Q
    ||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  49206953 aatcttaggctcaagtccgcgtaccgcctcggcattaatcttagcaatctcttgaaacatgccaccatttatcatcaagtaatcccttacagctgtgtag 49207052  T
Q  609 tcgtttccaagtgcattgagaagtgtacttacatacactccttgagcattcccaagtgtcacaatcccctctgcctcttttttctttgcatatagctccg 708  Q
    | |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| |    
T  49207053 ttgtttccaagtgcattgagaagtgtacttacatacgctccttgagcattcccaagtgtcataatcccctctgcctcttttttctttgcgtatagctctg 49207152  T
Q  709 tttcggctgcttgcttgcgcgcataaaatgttgcatctgacaatgctttctgtgcttctgcctctgccttcttctcatacagaattgcttctgcttcttt 808  Q
     ||| ||| |||||||||| ||||||||||| | ||||| ||||||||| || |||||||||||||||||||||||||||||||||||||| || |||||    
T  49207153 cttcagcttcttgcttgcgagcataaaatgtggaatctgccaatgctttttgcgcttctgcctctgccttcttctcatacagaattgcttcagcctcttt 49207252  T
Q  809 ttgtttctt 817  Q
    |||||||||    
T  49207253 ttgtttctt 49207261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 311 - 817
Target Start/End: Original strand, 49211326 - 49211835
Alignment:
Q  311 actactataaacctaatacttgcatcctcctaattaaga-------gcttttgtctgataaggttcccatccaagcaggaggcaacatgcctgtttgctc 403  Q
    |||||| ||||||||||||||||||| ||||||||||||       ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  49211326 actactgtaaacctaatacttgcatc-tcctaattaagacttaagagcttttgtcagataaggatcccatccaagcaggaggcaacatgcctgtttgctc 49211424  T
Q  404 atggacagtcttaaacaaaggtggcaacatcttgtaaacaccagcaacctctttcatacccatagaaccttcgcctcca---ttgtcacctccattagtc 500  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||  |      |||||| || |||   || ||||| |||||||||    
T  49211425 atggacagtcttaaacagaggtggcaacatcttgtacacaccagcaacttctttcatcgc------accttcacccccactattatcaccaccattagtc 49211518  T
Q  501 caaatactaatcttaggttcaagtccgcgtaccgcctcagcattaatcttagccatctcttgaaacatgccaccatttatcatcaagtaatcccttagag 600  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  |    
T  49211519 caaatactaatcttaggctcaagtccgcgtaccgcctcagcattaatcttagcaatctcttgaaacatgccaccatttatcatcaagtaatcccttactg 49211618  T
Q  601 ctgtgtagtcgtttccaagtgcattgagaagtgtacttacatacactccttgagcattcccaagtgtcacaatcccctctgcctcttttttctttgcata 700  Q
    |||| |||| ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  49211619 ctgtatagttgtttccaagtgcattcagaagtgtacttacatacgctccttgagcattcccaagtgtcacaatcccctctgcctcttttttctttgcgta 49211718  T
Q  701 tagctccgtttcggctgcttgcttgcgcgcataaaatgttgcatctgacaatgctttctgtgcttctgcctctgccttcttctcatacagaattgcttct 800  Q
     ||||| | ||| ||| |||||||||| ||||||||||| | ||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  49211719 cagctctgcttcagcttcttgcttgcgagcataaaatgtggaatctgccaatgctttttgtgcttctgcctctgccttcttctcaaacagaattgcttct 49211818  T
Q  801 gcttctttttgtttctt 817  Q
    || || |||||||||||    
T  49211819 gcctccttttgtttctt 49211835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 309; E-Value: 1e-173
Query Start/End: Original strand, 330 - 817
Target Start/End: Original strand, 49201810 - 49202306
Alignment:
Q  330 ttgcatcctcctaattaagagcttttgtctgataaggttcccatccaagcaggaggcaacatgcctgtttgctcatggacagtcttaaacaaaggtggca 429  Q
    ||||||| ||||||||||| |||||| || ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  49201810 ttgcatcatcctaattaagggcttttctcagataaggctcccatccaagcaggaggcaacatgcccgtttgctcatggacagtcttaaacagaggtggca 49201909  T
Q  430 acatcttgtaaacaccagcaacctctttcatacccatagaaccttcg---------cctccattgtcacctccattagtccaaatactaatcttaggttc 520  Q
    |||||||||| ||||||||||| |||||||||||||| | ||||||          || ||| | ||||  |||||||||||||||||||||||||| ||    
T  49201910 acatcttgtagacaccagcaacttctttcatacccatggcaccttcagttttttcaccaccactatcactaccattagtccaaatactaatcttaggctc 49202009  T
Q  521 aagtccgcgtaccgcctcagcattaatcttagccatctcttgaaacatgccaccatttatcatcaagtaatcccttagagctgtgtagtcgtttccaagt 620  Q
    |||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  49202010 aagtccgcgtactgcctcggcattaatcttagcaatctcttgaaacatgccaccatttatcatcaagtaatcccttacagctgtgtagttgtttccaagt 49202109  T
Q  621 gcattgagaagtgtacttacatacactccttgagcattcccaagtgtcacaatcccctctgcctcttttttctttgcatatagctccgtttcggctgctt 720  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | ||||||| |||    
T  49202110 gcattcagaagtgtacttacatacgctccttgagcattcccaagtgtcacaatcccctctgcctcttttttctttgcgtatagctctgcttcggcttctt 49202209  T
Q  721 gcttgcgcgcataaaatgttgcatctgacaatgctttctgtgcttctgcctctgccttcttctcatacagaattgcttctgcttctttttgtttctt 817  Q
    ||||||  |||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||||||||||||| || ||||| || |||||    
T  49202210 gcttgcaagcataaaatgttgcatctgctgacgctttctgtgcttctgcctctgccttcttctcatacagaattgcttcagcctctttctgcttctt 49202306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 311 - 817
Target Start/End: Original strand, 49186811 - 49187326
Alignment:
Q  311 actactataaacctaatacttgcatcctcctaattaagagcttttgtctgataaggttcccatccaagcaggaggcaacatgcctgtttgctcatggaca 410  Q
    ||||||||||||| |||||||||||| ||||||| |||||||||| || ||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  49186811 actactataaaccaaatacttgcatcatcctaatcaagagcttttctcagataaggctcccatccaagcaggaggcaacatgcccgtttgctcatggaca 49186910  T
Q  411 gtcttaaacaaaggtggcaacatcttgtaaacaccagcaacctctttcatacccatagaaccttcg---------cctccattgtcacctccattagtcc 501  Q
    |||||||||| |||||||||||||||||| ||||||||||| |||||||||||||| | ||| ||          || | ||| ||||| ||||||||||    
T  49186911 gtcttaaacagaggtggcaacatcttgtagacaccagcaacttctttcatacccatggcaccatcagttattcccccactattatcaccaccattagtcc 49187010  T
Q  502 aaatactaatcttaggttcaagtccgcgtaccgcctcagcattaatcttagccatctcttgaaacatgccaccatttatcatcaagtaatcccttagagc 601  Q
    |||||||||||||||| |||||||||||||  ||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||    
T  49187011 aaatactaatcttaggctcaagtccgcgtattgcctcggcattaatcttagcaatctcttgaaacatgtcaccatttatcatcaagtaatcccttacagc 49187110  T
Q  602 tgtgtagtcgtttccaagtgcattgagaagtgtacttacatacactccttgagcattcccaagtgtcacaatcccctctgcctcttttttctttgcatat 701  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |  |||||||||||||| ||||||||||| ||||||||||||||     
T  49187111 tgtgtagtcgtttccaagtgcattgagaagtgtacttacatacgctccttgagcttgtccaagtgtcacaattccctctgcctcctttttctttgcataa 49187210  T
Q  702 agctccgtttcggctgcttgcttgcgcgcataaaatgttgcatctgacaatgctttctgtgcttctgcctctgccttcttctcatacagaattgcttctg 801  Q
    ||||| | ||| |||||||| ||||  ||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||| |    
T  49187211 agctctgcttcagctgcttgtttgctagcataaaatgttgcatctgccgacgctttctgtgcttctgcctctgccttcttctcatacagaattgcttcag 49187310  T
Q  802 cttctttttgtttctt 817  Q
      ||||| ||||||||    
T  49187311 tctctttctgtttctt 49187326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 315 - 817
Target Start/End: Original strand, 49190519 - 49191017
Alignment:
Q  315 ctataaacctaatacttgcatcctcctaattaagagcttttgtctgataaggttcccatccaagcaggaggcaacatgcctgtttgctcatggacagtct 414  Q
    |||||||| ||||| ||||||| |||||||| | || ||||||| |  |||  ||||||||||||||| || ||||| || ||||||||||| |||||||    
T  49190519 ctataaacataatagttgcatcatcctaattca-agtttttgtcaggcaagactcccatccaagcaggtggtaacattcccgtttgctcatgaacagtct 49190617  T
Q  415 taaacaaaggtggcaacatcttgtaaacaccagcaacctctttcatacccatagaaccttcgcctcca---ttgtcacctccattagtccaaatactaat 511  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||  |      |||||| || |||   || ||||| ||||||||||||||||||||    
T  49190618 taaacaaaggtggcaacatcttgtagacaccagcaacttctttcatcgc------accttcacccccactattatcaccaccattagtccaaatactaat 49190711  T
Q  512 cttaggttcaagtccgcgtaccgcctcagcattaatcttagccatctcttgaaacatgccaccatttatcatcaagtaatcccttagagctgtgtagtcg 611  Q
    |||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||| |    
T  49190712 cttaggctcaagtccgcgtactgcctcagcattaatcttagcgatctcttgaaacatgccaccatttatcatcaagaaatcccttacagcagtgtagttg 49190811  T
Q  612 tttccaagtgcattgagaagtgtacttacatacactccttgagcattcccaagtgtcacaatcccctctgcctcttttttctttgcatatagctccgttt 711  Q
    |||||||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| | ||    
T  49190812 tttccaagtgcattgagaagtgcacttagatacaccccttgagcattcccaagtgtcacaattccctctgcctcctttttctttgcatatagctctgctt 49190911  T
Q  712 cggctgcttgcttgcgcgcataaaatgttgcatctgacaatgctttctgtgcttctgcctctgccttcttctcatacagaattgcttctgcttctttttg 811  Q
    | ||||||||| |||| |||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  49190912 cagctgcttgcgtgcgagcataaaatgttgcgtctgctaatgctttctgtgcttctgcctctgccttcttctcatacagaattgcttctgcctccttttg 49191011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 159
Target Start/End: Complemental strand, 13875659 - 13875613
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaat 159  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||    
T  13875659 actaaaaatataaatgtttgttgctttcaaattataacaaaccaaat 13875613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 611973 - 611928
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||    
T  611973 actaaaaatataaatgtttgttgctttcaagttataacaaaccaaa 611928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 3890722 - 3890677
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||    
T  3890722 actaaaaatataaatgtttgttgctttcaagttataacaaaccaaa 3890677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 17476529 - 17476484
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||    
T  17476529 actaaaaatataaatgtttgttgctttcaaattataacaaaccaaa 17476484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 18388690 - 18388735
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||    
T  18388690 actaaaaatataaatgtttgttgctttcaagttataacaaaccaaa 18388735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 35380024 - 35379979
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||    
T  35380024 actaaaaatataaatgtttgttgctttcaagttataacaaaccaaa 35379979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 115 - 159
Target Start/End: Complemental strand, 22152419 - 22152375
Alignment:
Q  115 taaaaatataaatgtttgttactttcaatttataacaaaccaaat 159  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||    
T  22152419 taaaaatataaatgtttgttactttcaaattataacaaactaaat 22152375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 158
Target Start/End: Complemental strand, 7777724 - 7777682
Alignment:
Q  116 aaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    ||||||||||||||||||| ||||||| |||||||||||||||    
T  7777724 aaaaatataaatgtttgttgctttcaagttataacaaaccaaa 7777682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 158
Target Start/End: Complemental strand, 22258285 - 22258243
Alignment:
Q  116 aaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||| |||||||||||||||||| |||||||||||||||    
T  22258285 aaaaatatgaatgtttgttactttcaagttataacaaaccaaa 22258243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 221 - 263
Target Start/End: Original strand, 49190375 - 49190417
Alignment:
Q  221 attccattcataaaataccaagcatataaaattgtaaattaaa 263  Q
    ||||||||||||||||||||||||| ||||| |||||||||||    
T  49190375 attccattcataaaataccaagcatgtaaaagtgtaaattaaa 49190417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 2363450 - 2363495
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||||| |||||||  ||||||||||||||    
T  2363450 actaaaaatataaatgtttgttgctttcaagctataacaaaccaaa 2363495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 3889875 - 3889920
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||||| |||| || |||||||||||||||    
T  3889875 actaaaaatataaatgtttgttgcttttaagttataacaaaccaaa 3889920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 3899692 - 3899737
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||||| |||| || |||||||||||||||    
T  3899692 actaaaaatataaatgtttgttgcttttaagttataacaaaccaaa 3899737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 19245491 - 19245446
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||||| |||| || |||||||||||||||    
T  19245491 actaaaaatataaatgtttgttgcttttaagttataacaaaccaaa 19245446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 21030490 - 21030535
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||||| ||||||| |||||||||| ||||    
T  21030490 actaaaaatataaatgtttgttgctttcaagttataacaaagcaaa 21030535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 21078804 - 21078759
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||| ||| ||||||| |||||||||||||||    
T  21078804 actaaaaatataaatgttggttgctttcaagttataacaaaccaaa 21078759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 154
Target Start/End: Original strand, 30805800 - 30805841
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaac 154  Q
    |||||||||||||||||||||||||||||| ||| |||||||    
T  30805800 actaaaaatataaatgtttgttactttcaaattagaacaaac 30805841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 31766569 - 31766614
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    ||||||||||||||||||||||  |||||| |||||||||||||||    
T  31766569 actaaaaatataaatgtttgttgttttcaacttataacaaaccaaa 31766614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 161
Target Start/End: Original strand, 47787172 - 47787220
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaataa 161  Q
    |||||||| ||||||||||||| ||||||| |||||||||| |||||||    
T  47787172 actaaaaacataaatgtttgttgctttcaaattataacaaatcaaataa 47787220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 187 - 274
Target Start/End: Original strand, 49211116 - 49211205
Alignment:
Q  187 agtccttctcatgattttagtttttattgcaaacattccattcataaaataccaagcatata---aaattgtaaattaaattagcatataa 274  Q
    ||||||||||| || ||| ||||||||||| || |||| |||||||||| | ||||||| ||   ||||| ||||||||||||||||||||    
T  49211116 agtccttctcaggagttttgtttttattgcgaaaattcaattcataaaagatcaagcatgtagagaaatt-taaattaaattagcatataa 49211205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 159
Target Start/End: Original strand, 12565405 - 12565452
Alignment:
Q  112 cactaaaaatataaatgtttgttactttcaatttataacaaaccaaat 159  Q
    ||||||||||||||||||||||| ||||||| |||||| ||| |||||    
T  12565405 cactaaaaatataaatgtttgttgctttcaagttataagaaatcaaat 12565452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 159
Target Start/End: Original strand, 13259804 - 13259851
Alignment:
Q  112 cactaaaaatataaatgtttgttactttcaatttataacaaaccaaat 159  Q
    ||||||||||||||||||||||| ||||||| |||||| ||| |||||    
T  13259804 cactaaaaatataaatgtttgttgctttcaagttataagaaatcaaat 13259851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 154
Target Start/End: Complemental strand, 25842502 - 25842463
Alignment:
Q  115 taaaaatataaatgtttgttactttcaatttataacaaac 154  Q
    |||||||||||||||||||| ||||||| |||||||||||    
T  25842502 taaaaatataaatgtttgttgctttcaagttataacaaac 25842463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 303
Target Start/End: Original strand, 49201671 - 49201742
Alignment:
Q  232 aaaataccaagcatataaaattgtaaattaaattagcatataatataagattttgaacttaaaactactaaa 303  Q
    ||||||||| |||| ||||| |||||||||||||  ||||||| |||| | ||||||| |||||||| ||||    
T  49201671 aaaataccatgcatgtaaaaatgtaaattaaattgtcatataacataatagtttgaacctaaaactaataaa 49201742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 159
Target Start/End: Complemental strand, 14265956 - 14265910
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaat 159  Q
    |||||||||||||||||||||| ||||  | ||||||||||||||||    
T  14265956 actaaaaatataaatgtttgttgctttttaattataacaaaccaaat 14265910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 159
Target Start/End: Original strand, 19420049 - 19420095
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaat 159  Q
    |||||||||||||||||||||| ||||| | || |||||||||||||    
T  19420049 actaaaaatataaatgtttgttgctttctagttgtaacaaaccaaat 19420095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 158
Target Start/End: Original strand, 45701832 - 45701874
Alignment:
Q  116 aaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||  |||||| |||||||||||||||    
T  45701832 aaaaatataaatgtttgttgttttcaagttataacaaaccaaa 45701874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 159
Target Start/End: Complemental strand, 48796340 - 48796294
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaat 159  Q
    |||||||||||||||||||||| ||||| | |||||||||| |||||    
T  48796340 actaaaaatataaatgtttgttgctttctagttataacaaatcaaat 48796294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 159
Target Start/End: Complemental strand, 54768107 - 54768061
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaat 159  Q
    |||||||||||||||||||||| |||| ||  |||||||||||||||    
T  54768107 actaaaaatataaatgtttgttgcttttaagctataacaaaccaaat 54768061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 7252200 - 7252245
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    ||||||||||||||| |||||| |||| || |||||||||||||||    
T  7252200 actaaaaatataaatatttgtttcttttaagttataacaaaccaaa 7252245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 7429914 - 7429959
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||| ||||||||||||| ||||||| |||||| ||||||||    
T  7429914 actaaaaaaataaatgtttgtttctttcaagttataataaaccaaa 7429959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 8149449 - 8149494
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    ||||||||||||||||||||||  |||||| ||||||||| |||||    
T  8149449 actaaaaatataaatgtttgttgttttcaagttataacaatccaaa 8149494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 154
Target Start/End: Complemental strand, 9861905 - 9861864
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaac 154  Q
    ||||||||||||||||||||||  |||||| |||||||||||    
T  9861905 actaaaaatataaatgtttgttgttttcaagttataacaaac 9861864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 18020588 - 18020543
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||||| ||||||| ||||| |||| ||||    
T  18020588 actaaaaatataaatgtttgttgctttcaaattatagcaaatcaaa 18020543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 18540471 - 18540516
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||| ||||| ||||||| |||||||||| ||||    
T  18540471 actaaaaatataaatgcttgttgctttcaagttataacaaatcaaa 18540516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 159
Target Start/End: Complemental strand, 21970200 - 21970159
Alignment:
Q  118 aaatataaatgtttgttactttcaatttataacaaaccaaat 159  Q
    |||||||||||||||| |||||| | ||||||||||||||||    
T  21970200 aaatataaatgtttgtgactttccaattataacaaaccaaat 21970159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 159
Target Start/End: Complemental strand, 21992636 - 21992595
Alignment:
Q  118 aaatataaatgtttgttactttcaatttataacaaaccaaat 159  Q
    |||||||||||||||| |||||| | ||||||||||||||||    
T  21992636 aaatataaatgtttgtgactttccaattataacaaaccaaat 21992595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 158
Target Start/End: Complemental strand, 26130935 - 26130894
Alignment:
Q  117 aaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    ||||||||||||||||| |||||||| |||||||||| ||||    
T  26130935 aaaatataaatgtttgtcactttcaagttataacaaatcaaa 26130894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 27398344 - 27398299
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    ||||| ||||||||| |||||| ||||||| |||||||||||||||    
T  27398344 actaataatataaatttttgttgctttcaaattataacaaaccaaa 27398299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 50483516 - 50483561
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||  ||||||| ||||||| |||||||||||||||    
T  50483516 actaaaaatataatcgtttgttgctttcaagttataacaaaccaaa 50483561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 51006334 - 51006289
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||||| || |||| |||||||||| ||||    
T  51006334 actaaaaatataaatgtttgttgctctcaagttataacaaatcaaa 51006289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 154
Target Start/End: Original strand, 53162137 - 53162178
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaac 154  Q
    |||||||||||||||||||||| |||| || |||||||||||    
T  53162137 actaaaaatataaatgtttgttgcttttaagttataacaaac 53162178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 221; Significance: 1e-121; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 388 - 817
Target Start/End: Original strand, 26755869 - 26756304
Alignment:
Q  388 acatgcctgtttgctcatggacagtcttaaacaaaggtggcaacatcttgtaaacaccagcaacctctttcatacccatagaacc---------ttcgcc 478  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||||||| ||||||||||| ||||||||||| ||   |||         ||||||    
T  26755869 acatgcctgtttgctcatggactgtcttaaacagaggtggcaacatcttgtacacaccagcaacttctttcatacctatgccaccgtcagttttttcgcc 26755968  T
Q  479 tccattgtcacctccattagtccaaatactaatcttaggttcaagtccgcgtaccgcctcagcattaatcttagccatctcttgaaacatgccaccattt 578  Q
     || || |||||   ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| || || ||| |||||||||||||||||    
T  26755969 accgttatcacc---attagtccaaatactaatcttaggttcaagtccgcgtatagcctcagcattaatcttcgcaatatctcgaaacatgccaccattt 26756065  T
Q  579 atcatcaagtaatcccttagagctgtgtagtcgtttccaagtgcattgagaagtgtacttacatacactccttgagcattcccaagtgtcacaatcccct 678  Q
    ||||||||||| ||||||| |||||| || ||   ||||||||| |||||||| ||||||||| |||| |||||| |||||||||||||||| |||||||    
T  26756066 atcatcaagtagtcccttacagctgtataatcacctccaagtgcgttgagaagggtacttacacacaccccttgaccattcccaagtgtcacgatcccct 26756165  T
Q  679 ctgcctcttttttctttgcatatagctccgtttcggctgcttgcttgcgcgcataaaatgttgcatctgacaatgctttctgtgcttctgcctctgcctt 778  Q
    | ||||| || ||||||||||||||||| | |||||||||||| || || |||||||||||||||| || ||||||| |||||||||||||||||| |||    
T  26756166 ccgcctccttcttctttgcatatagctctgcttcggctgcttgtttacgagcataaaatgttgcatttgccaatgctatctgtgcttctgcctctgtctt 26756265  T
Q  779 cttctcatacagaattgcttctgcttctttttgtttctt 817  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  26756266 cttctcatacagaattgcttctgcctctttttgtttctt 26756304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 206 - 284
Target Start/End: Original strand, 26755727 - 26755806
Alignment:
Q  206 gtttttattgcaaacattccattcataaaataccaagcatataaaattgtaaattaaatt-agcatataatataagattt 284  Q
    |||||||| ||||| ||||| ||||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||    
T  26755727 gtttttatcgcaaaaattccgttcataaaataccaagcatataaaaatgtaaattaaattaagcatataacataagattt 26755806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 2691946 - 2691991
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||    
T  2691946 actaaaaatataaatgtttgttgctttcaagttataacaaaccaaa 2691991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 24023202 - 24023247
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||    
T  24023202 actaaaaatataaatgtttgttgctttcaagttataacaaaccaaa 24023247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 30264127 - 30264172
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||    
T  30264127 actaaaaatataaatgtttgttactttcaagttataacaaatcaaa 30264172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 32173160 - 32173115
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||    
T  32173160 actaaaaatataaatgtttgttactttcaagttataacaaatcaaa 32173115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 161
Target Start/End: Complemental strand, 3825360 - 3825312
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaataa 161  Q
    ||||||||||||||| |||||| ||||||| ||||||||||||||||||    
T  3825360 actaaaaatataaatatttgttgctttcaagttataacaaaccaaataa 3825312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 115 - 158
Target Start/End: Original strand, 15837402 - 15837445
Alignment:
Q  115 taaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||| ||||||| |||||||||||||||    
T  15837402 taaaaatataaatgtttgttgctttcaagttataacaaaccaaa 15837445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 115 - 161
Target Start/End: Original strand, 18994651 - 18994697
Alignment:
Q  115 taaaaatataaatgtttgttactttcaatttataacaaaccaaataa 161  Q
    ||||||||||||||| |||| ||||||| ||||||||||||||||||    
T  18994651 taaaaatataaatgtatgttgctttcaagttataacaaaccaaataa 18994697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 158
Target Start/End: Original strand, 27022740 - 27022782
Alignment:
Q  116 aaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    ||||||||||||||||||| ||||||| |||||||||||||||    
T  27022740 aaaaatataaatgtttgttgctttcaagttataacaaaccaaa 27022782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 159
Target Start/End: Complemental strand, 28205596 - 28205550
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaat 159  Q
    |||||||||||| ||||||||| ||||||| ||||||||||||||||    
T  28205596 actaaaaatatagatgtttgttgctttcaagttataacaaaccaaat 28205550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 159
Target Start/End: Original strand, 41941168 - 41941214
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaat 159  Q
    ||||||||||||||||||||||  |||||| ||||||||||||||||    
T  41941168 actaaaaatataaatgtttgttggtttcaaattataacaaaccaaat 41941214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 4430117 - 4430162
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||||| ||||||| |||||||||| ||||    
T  4430117 actaaaaatataaatgtttgttgctttcaagttataacaaatcaaa 4430162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 13469333 - 13469288
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    ||||||| |||||||||||||| ||||||| |||||||||||||||    
T  13469333 actaaaactataaatgtttgttgctttcaagttataacaaaccaaa 13469288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 15044190 - 15044235
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||||| ||||| | |||||||||||||||    
T  15044190 actaaaaatataaatgtttgtttctttccaattataacaaaccaaa 15044235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 33192430 - 33192475
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    ||||||||| |||||||||||| ||||||| |||||||||||||||    
T  33192430 actaaaaatttaaatgtttgttgctttcaagttataacaaaccaaa 33192475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 41666656 - 41666701
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||||| |||| || |||||||||||||||    
T  41666656 actaaaaatataaatgtttgttgctttaaaattataacaaaccaaa 41666701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 159
Target Start/End: Complemental strand, 288941 - 288897
Alignment:
Q  115 taaaaatataaatgtttgttactttcaatttataacaaaccaaat 159  Q
    |||||||| ||||||||||| ||||||| ||||||||||||||||    
T  288941 taaaaatagaaatgtttgttgctttcaagttataacaaaccaaat 288897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 158
Target Start/End: Complemental strand, 1170659 - 1170619
Alignment:
Q  118 aaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||| |||||||||||||| |||||||||||||||    
T  1170659 aaatataaatatttgttactttcaagttataacaaaccaaa 1170619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 159
Target Start/End: Complemental strand, 9503143 - 9503099
Alignment:
Q  115 taaaaatataaatgtttgttactttcaatttataacaaaccaaat 159  Q
    ||||||||||||| |||||| ||||||| ||||||||||||||||    
T  9503143 taaaaatataaatatttgttgctttcaaattataacaaaccaaat 9503099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 159
Target Start/End: Original strand, 33653582 - 33653622
Alignment:
Q  119 aatataaatgtttgttactttcaatttataacaaaccaaat 159  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  33653582 aatataaatgtttgttgctttcaagttataacaaaccaaat 33653622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 158
Target Start/End: Original strand, 11929541 - 11929584
Alignment:
Q  115 taaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||| | ||||| |||||||||||||||    
T  11929541 taaaaatataaatgtttgttgcattcaaattataacaaaccaaa 11929584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 158
Target Start/End: Complemental strand, 11941710 - 11941667
Alignment:
Q  115 taaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||| | ||||| |||||||||||||||    
T  11941710 taaaaatataaatgtttgttgcattcaaattataacaaaccaaa 11941667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 160
Target Start/End: Original strand, 12721810 - 12721857
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaata 160  Q
    |||| |||||||||| |||||| ||||||| |||||||||||||||||    
T  12721810 actacaaatataaatatttgttgctttcaagttataacaaaccaaata 12721857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 158
Target Start/End: Complemental strand, 15898927 - 15898884
Alignment:
Q  115 taaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    ||||||||||||| |||||| |||| ||||||||||||||||||    
T  15898927 taaaaatataaatatttgttgcttttaatttataacaaaccaaa 15898884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 158
Target Start/End: Complemental strand, 18638372 - 18638329
Alignment:
Q  115 taaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||| ||||||| |||||||||| ||||    
T  18638372 taaaaatataaatgtttgttgctttcaagttataacaaatcaaa 18638329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 152
Target Start/End: Complemental strand, 24852634 - 24852595
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaa 152  Q
    |||||||||||||||||||||| ||||||| |||||||||    
T  24852634 actaaaaatataaatgtttgttgctttcaaattataacaa 24852595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 159
Target Start/End: Original strand, 5626054 - 5626100
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaat 159  Q
    ||||||||||| |||||||||| ||||||| |||||||||| |||||    
T  5626054 actaaaaatattaatgtttgttgctttcaagttataacaaatcaaat 5626100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 159
Target Start/End: Original strand, 10865112 - 10865158
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaat 159  Q
    |||||||||||||||||||||| ||||  | ||||||||||||||||    
T  10865112 actaaaaatataaatgtttgttgctttttagttataacaaaccaaat 10865158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 159
Target Start/End: Complemental strand, 34967012 - 34966966
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaat 159  Q
    ||||||| |||||||||||||| ||||||| | ||||||||||||||    
T  34967012 actaaaattataaatgtttgttgctttcaagtaataacaaaccaaat 34966966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 154
Target Start/End: Complemental strand, 38283820 - 38283782
Alignment:
Q  116 aaaaatataaatgtttgttactttcaatttataacaaac 154  Q
    ||||||||||||||||||| ||||||| |||||||||||    
T  38283820 aaaaatataaatgtttgttgctttcaagttataacaaac 38283782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 1372754 - 1372709
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||| |||||||||||  |||||| |||||||||||||||    
T  1372754 actaaaaatacaaatgtttgttgttttcaacttataacaaaccaaa 1372709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 158
Target Start/End: Complemental strand, 11352970 - 11352929
Alignment:
Q  117 aaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||| ||||||| |||||||||| ||||    
T  11352970 aaaatataaatgtttgttgctttcaagttataacaaatcaaa 11352929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 12470951 - 12470996
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    ||||| ||||||||| |||||||||||| | |||||||||||||||    
T  12470951 actaataatataaatttttgttactttcgagttataacaaaccaaa 12470996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 13369209 - 13369254
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||| |||||||||| || ||||||| |||||||||||||||    
T  13369209 actaaaaaaataaatgtttattgctttcaaattataacaaaccaaa 13369254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 18279273 - 18279318
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    ||||||||||||| |||| ||| ||||||| |||||||||||||||    
T  18279273 actaaaaatataattgttcgttgctttcaagttataacaaaccaaa 18279318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 24688787 - 24688743
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    ||||||||||||||||||| || ||||||| |||||||||||||||    
T  24688787 actaaaaatataaatgttt-ttgctttcaagttataacaaaccaaa 24688743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 154
Target Start/End: Complemental strand, 25722914 - 25722873
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaac 154  Q
    ||||||||||||||||||| |||||||||  |||||||||||    
T  25722914 actaaaaatataaatgtttattactttcaggttataacaaac 25722873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 30800508 - 30800553
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||||| ||||| | |||||||||| ||||    
T  30800508 actaaaaatataaatgtttgttgctttcgagttataacaaatcaaa 30800553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 43922385 - 43922340
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||||  ||||||| |||||||||| ||||    
T  43922385 actaaaaatataaatgtttgtcgctttcaagttataacaaagcaaa 43922340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 95; Significance: 5e-46; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 311 - 422
Target Start/End: Complemental strand, 52267503 - 52267388
Alignment:
Q  311 actactataaacctaatacttgc----atcctcctaattaagagcttttgtctgataaggttcccatccaagcaggaggcaacatgcctgtttgctcatg 406  Q
    |||||||||||||||||||||||    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  52267503 actactataaacctaatacttgcttgcatcctcctaattaagagcttttgtcggataaggttcccatccaagcaggaggcaacatgcctgtttgctcatg 52267404  T
Q  407 gacagtcttaaacaaa 422  Q
    ||||||||||||||||    
T  52267403 gacagtcttaaacaaa 52267388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 115 - 158
Target Start/End: Original strand, 12214476 - 12214519
Alignment:
Q  115 taaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||||||||||| |||||||||||||||    
T  12214476 taaaaatataaatgtttgttactttcaagttataacaaaccaaa 12214519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 35595510 - 35595555
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||    
T  35595510 actaaaaatataaatgtttgttgctttcaagttataacaaaccaaa 35595555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 55232532 - 55232577
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||    
T  55232532 actaaaaatataaatgtttgttgctttcaagttataacaaaccaaa 55232577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 56085005 - 56085050
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||    
T  56085005 actaaaaatataaatgtttgttgctttcaagttataacaaaccaaa 56085050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 115 - 159
Target Start/End: Complemental strand, 627989 - 627945
Alignment:
Q  115 taaaaatataaatgtttgttactttcaatttataacaaaccaaat 159  Q
    |||||||||||||||||||||||||| | ||||||||||||||||    
T  627989 taaaaatataaatgtttgttactttctagttataacaaaccaaat 627945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 115 - 158
Target Start/End: Original strand, 47045074 - 47045117
Alignment:
Q  115 taaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||| ||||||| |||||||||||||||    
T  47045074 taaaaatataaatgtttgttgctttcaagttataacaaaccaaa 47045117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 158
Target Start/End: Complemental strand, 2186476 - 2186434
Alignment:
Q  116 aaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    ||||||||||||||||||| ||||||| |||||||||||||||    
T  2186476 aaaaatataaatgtttgttgctttcaagttataacaaaccaaa 2186434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 894087 - 894042
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||||| ||||||| |||||||||| ||||    
T  894087 actaaaaatataaatgtttgttgctttcaaattataacaaatcaaa 894042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 2548584 - 2548539
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    ||||||||||||||||||||||| |||||  |||||||||||||||    
T  2548584 actaaaaatataaatgtttgttattttcaggttataacaaaccaaa 2548539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 7712760 - 7712715
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||||  ||||||| |||||||||||||||    
T  7712760 actaaaaatataaatgtttgtagctttcaagttataacaaaccaaa 7712715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 13781640 - 13781595
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||||| ||||||| |||||||||| ||||    
T  13781640 actaaaaatataaatgtttgttgctttcaagttataacaaatcaaa 13781595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 20702688 - 20702643
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||||| ||||||| | |||||||||||||    
T  20702688 actaaaaatataaatgtttgtttctttcaagtgataacaaaccaaa 20702643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 23091220 - 23091265
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||||| ||||||| |||||||||| ||||    
T  23091220 actaaaaatataaatgtttgttgctttcaagttataacaaatcaaa 23091265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 26878525 - 26878570
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    ||||||||||| |||||||||| ||||||| |||||||||||||||    
T  26878525 actaaaaatattaatgtttgttgctttcaaattataacaaaccaaa 26878570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 35447577 - 35447622
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||||| ||||||| |||||| ||||||||    
T  35447577 actaaaaatataaatgtttgttgctttcaagttataataaaccaaa 35447622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 38740694 - 38740739
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    ||||||||||||||||||||||  |||||| |||||||||||||||    
T  38740694 actaaaaatataaatgtttgttgttttcaacttataacaaaccaaa 38740739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 49575044 - 49574999
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||||| |||| || |||||||||||||||    
T  49575044 actaaaaatataaatgtttgttgcttttaagttataacaaaccaaa 49574999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 115 - 153
Target Start/End: Complemental strand, 5190595 - 5190557
Alignment:
Q  115 taaaaatataaatgtttgttactttcaatttataacaaa 153  Q
    ||||||||||||||||||||| |||||| ||||||||||    
T  5190595 taaaaatataaatgtttgttattttcaagttataacaaa 5190557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 158
Target Start/End: Complemental strand, 21122384 - 21122342
Alignment:
Q  116 aaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||  |||||| |||||||||||||||    
T  21122384 aaaaatataaatgtttgttgttttcaagttataacaaaccaaa 21122342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 158
Target Start/End: Original strand, 37143228 - 37143270
Alignment:
Q  116 aaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    ||||||||||||||||||||||||||| |||||| ||| ||||    
T  37143228 aaaaatataaatgtttgttactttcaagttataaaaaatcaaa 37143270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 159
Target Start/End: Complemental strand, 44470397 - 44470351
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaat 159  Q
    ||||||||||||||| |||||| ||||| | ||||||||||||||||    
T  44470397 actaaaaatataaatatttgttgctttctagttataacaaaccaaat 44470351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 5049148 - 5049193
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    ||||| |||||||||||||||| ||||||| |||||||||| ||||    
T  5049148 actaataatataaatgtttgttgctttcaagttataacaaaacaaa 5049193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 154
Target Start/End: Complemental strand, 9170862 - 9170822
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaac 154  Q
    ||||||||||||||| |||||||||||||| |||||||||||    
T  9170862 actaaaaatataaat-tttgttactttcaaattataacaaac 9170822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 154
Target Start/End: Complemental strand, 15849715 - 15849674
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaac 154  Q
    ||||||||||||||| |||||| ||||||| |||||||||||    
T  15849715 actaaaaatataaatatttgttgctttcaagttataacaaac 15849674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 17702476 - 17702521
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    ||||||||||||||| ||||||  |||||| |||||||||||||||    
T  17702476 actaaaaatataaatctttgttgttttcaagttataacaaaccaaa 17702521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 158
Target Start/End: Original strand, 21054012 - 21054053
Alignment:
Q  117 aaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||| ||||||| ||| |||||||||||    
T  21054012 aaaatataaatgtttgttgctttcaagttaaaacaaaccaaa 21054053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 21796463 - 21796418
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||| || || ||||||| |||||||||||||||    
T  21796463 actaaaaatataaatgcttattgctttcaagttataacaaaccaaa 21796418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 158
Target Start/End: Complemental strand, 28808904 - 28808863
Alignment:
Q  118 aaatataaatgtttgtt-actttcaatttataacaaaccaaa 158  Q
    ||||||||||||||||| |||||||| |||||||||||||||    
T  28808904 aaatataaatgtttgtttactttcaaattataacaaaccaaa 28808863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 154
Target Start/End: Complemental strand, 31139097 - 31139056
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaac 154  Q
    |||||||||||||||||||||| |||| || |||||||||||    
T  31139097 actaaaaatataaatgtttgttgctttgaagttataacaaac 31139056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 113 - 156
Target Start/End: Complemental strand, 227418 - 227375
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaacca 156  Q
    |||||||||||||||||||||||||||||| |||||||||||||    
T  227418 actaaaaatataaatgtttgttactttcaaattataacaaacca 227375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 159
Target Start/End: Original strand, 46978 - 47024
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaat 159  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||    
T  46978 actaaaaatataaatgtttgttgctttcaagttataacaaaccaaat 47024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 4994 - 4949
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||    
T  4994 actaaaaatataaatgtttgttgctttcaagttataacaaaccaaa 4949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000005; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 154
Target Start/End: Original strand, 21993121 - 21993162
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaac 154  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  21993121 actaaaaatataaatgtttgttactttcaagttataacaaac 21993162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 23896825 - 23896780
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||    
T  23896825 actaaaaatataaatgtttgttgctttcaagttataacaaaccaaa 23896780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 25834757 - 25834712
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||    
T  25834757 actaaaaatataaatgtttgttgctttcaagttataacaaaccaaa 25834712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 27509806 - 27509761
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||    
T  27509806 actaaaaatataaatgtttgtttctttcaagttataacaaaccaaa 27509761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 35446530 - 35446575
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||    
T  35446530 actaaaaatgtaaatgtttgttactttcaaattataacaaaccaaa 35446575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 113 - 161
Target Start/End: Complemental strand, 47901897 - 47901849
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaataa 161  Q
    |||||||| ||||||||||||| ||||||| ||||||||||||||||||    
T  47901897 actaaaaaaataaatgtttgttgctttcaagttataacaaaccaaataa 47901849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 113 - 156
Target Start/End: Complemental strand, 10040565 - 10040522
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaacca 156  Q
    |||||||||||||||||||||| ||||||| |||||||||||||    
T  10040565 actaaaaatataaatgtttgttgctttcaagttataacaaacca 10040522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 159
Target Start/End: Complemental strand, 1748580 - 1748534
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaat 159  Q
    |||||||||||||||||||||| ||||||| |||||||||| |||||    
T  1748580 actaaaaatataaatgtttgttgctttcaaattataacaaatcaaat 1748534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 159
Target Start/End: Complemental strand, 9412827 - 9412781
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaat 159  Q
    |||||||||||||||||||||  ||||||| ||||||||||||||||    
T  9412827 actaaaaatataaatgtttgtcgctttcaagttataacaaaccaaat 9412781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 159
Target Start/End: Complemental strand, 21081604 - 21081558
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaat 159  Q
    |||||||||||||||||||||| ||||| | ||||||||||||||||    
T  21081604 actaaaaatataaatgtttgttgctttctaattataacaaaccaaat 21081558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 1787120 - 1787075
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||||| ||||||| |||||||||| ||||    
T  1787120 actaaaaatataaatgtttgttgctttcaagttataacaaatcaaa 1787075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 12170698 - 12170653
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||| |||||||||||| |||||| |||||||||||||||    
T  12170698 actaaaaatacaaatgtttgttattttcaagttataacaaaccaaa 12170653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 22479765 - 22479721
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||||||||||| | |||||||||||||||    
T  22479765 actaaaaatataaatgtttgttactttc-agttataacaaaccaaa 22479721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 23051030 - 23050985
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    ||||||||||||||| |||||| ||||||| |||||||||||||||    
T  23051030 actaaaaatataaatctttgttgctttcaagttataacaaaccaaa 23050985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 23774779 - 23774824
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||||| ||| ||| |||||||||||||||    
T  23774779 actaaaaatataaatgtttgttgcttacaagttataacaaaccaaa 23774824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 39435128 - 39435083
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    ||||||||||||||||||| || ||||||| |||||||||||||||    
T  39435128 actaaaaatataaatgtttattgctttcaagttataacaaaccaaa 39435083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 41747643 - 41747688
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||||| ||||||| || ||||||||||||    
T  41747643 actaaaaatataaatgtttgttgctttcaagttgtaacaaaccaaa 41747688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 48103589 - 48103634
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||||| ||||||| |||||||||| ||||    
T  48103589 actaaaaatataaatgtttgttgctttcaaattataacaaatcaaa 48103634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 153
Target Start/End: Original strand, 581955 - 581995
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaa 153  Q
    |||||||||||||||||||||| ||||||| ||||||||||    
T  581955 actaaaaatataaatgtttgttgctttcaagttataacaaa 581995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 153
Target Start/End: Original strand, 20692047 - 20692087
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaa 153  Q
    |||||||||||||||||||||| ||||||| ||||||||||    
T  20692047 actaaaaatataaatgtttgttgctttcaagttataacaaa 20692087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 153
Target Start/End: Original strand, 20697525 - 20697565
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaa 153  Q
    |||||||||||||||||||||| ||||||| ||||||||||    
T  20697525 actaaaaatataaatgtttgttgctttcaagttataacaaa 20697565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 159
Target Start/End: Original strand, 35213852 - 35213896
Alignment:
Q  115 taaaaatataaatgtttgttactttcaatttataacaaaccaaat 159  Q
    |||||||||||||||||||| ||||||| ||||||||||| ||||    
T  35213852 taaaaatataaatgtttgttgctttcaaattataacaaactaaat 35213896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 115 - 153
Target Start/End: Original strand, 23160915 - 23160953
Alignment:
Q  115 taaaaatataaatgtttgttactttcaatttataacaaa 153  Q
    ||||||||||||||||| |||||||||| ||||||||||    
T  23160915 taaaaatataaatgttttttactttcaaattataacaaa 23160953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 158
Target Start/End: Complemental strand, 39459992 - 39459950
Alignment:
Q  116 aaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||    
T  39459992 aaaaatataaatgtttgttgctttcaagttataagaaaccaaa 39459950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 8790966 - 8790921
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||| ||||||||||| ||||||| |||||||||| ||||    
T  8790966 actaaaaatacaaatgtttgttgctttcaagttataacaaatcaaa 8790921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 9334867 - 9334822
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||||| |||| || |||||||||| ||||    
T  9334867 actaaaaatataaatgtttgttgcttttaaattataacaaatcaaa 9334822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 11573515 - 11573470
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    ||||||||||||||| ||||||  |||||| |||||||||||||||    
T  11573515 actaaaaatataaatatttgttgttttcaaattataacaaaccaaa 11573470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 154
Target Start/End: Original strand, 27513260 - 27513301
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaac 154  Q
    |||||||| ||||||||||||| ||||||| |||||||||||    
T  27513260 actaaaaaaataaatgtttgttcctttcaaattataacaaac 27513301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 29366054 - 29366099
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||| | ||||||| |||||| ||||||||    
T  29366054 actaaaaatataaatgtttgctgctttcaagttataaaaaaccaaa 29366099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 34729347 - 34729302
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||||| ||||||| || ||||||| ||||    
T  34729347 actaaaaatataaatgtttgttgctttcaaattgtaacaaatcaaa 34729302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 154
Target Start/End: Complemental strand, 47741553 - 47741512
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaac 154  Q
    ||||||||||||||| ||| |||||||||| |||||||||||    
T  47741553 actaaaaatataaatattttttactttcaagttataacaaac 47741512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000005; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 831851 - 831806
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||    
T  831851 actaaaaatataaatgtttgttgctttcaagttataacaaaccaaa 831806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 4326250 - 4326295
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||    
T  4326250 actaaaaatataaatgtttgtttctttcaagttataacaaaccaaa 4326295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 17210831 - 17210786
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||    
T  17210831 actaaaaatataaatgtttgttgctttcaagttataacaaaccaaa 17210786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 36337540 - 36337495
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||||||||||||| | |||||||||||||    
T  36337540 actaaaaatataaatgtttgttactttcaagtaataacaaaccaaa 36337495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 115 - 153
Target Start/End: Complemental strand, 24009557 - 24009519
Alignment:
Q  115 taaaaatataaatgtttgttactttcaatttataacaaa 153  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  24009557 taaaaatataaatgtttgttactttcaagttataacaaa 24009519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 2530405 - 2530360
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||||| |||| || |||||||||||||||    
T  2530405 actaaaaatataaatgtttgttgcttttaaattataacaaaccaaa 2530360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 5026366 - 5026321
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||||| | ||||| |||||||||||||||    
T  5026366 actaaaaatataaatgtttgttgcattcaaattataacaaaccaaa 5026321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 6226106 - 6226151
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||||| ||||||| |||||||||| ||||    
T  6226106 actaaaaatataaatgtttgttgctttcaagttataacaaatcaaa 6226151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 24836931 - 24836886
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||||| ||||||| |||||||||| ||||    
T  24836931 actaaaaatataaatgtttgttgctttcaagttataacaaatcaaa 24836886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 27905146 - 27905101
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    ||||||||||||||||||||||  |||||| |||||||||||||||    
T  27905146 actaaaaatataaatgtttgttgttttcaagttataacaaaccaaa 27905101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 28868224 - 28868269
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    ||||||||| |||||||||||| ||||||| |||||||||||||||    
T  28868224 actaaaaatgtaaatgtttgttgctttcaagttataacaaaccaaa 28868269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 154
Target Start/End: Complemental strand, 36267335 - 36267294
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaac 154  Q
    |||||||||||||||||||||| ||||||| |||||||||||    
T  36267335 actaaaaatataaatgtttgttgctttcaagttataacaaac 36267294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 42027550 - 42027595
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    ||||||||||||||||| |||| ||||||| |||||||||||||||    
T  42027550 actaaaaatataaatgtctgttgctttcaagttataacaaaccaaa 42027595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 161
Target Start/End: Complemental strand, 12083167 - 12083119
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaataa 161  Q
    |||||||||||||||||||||| ||||| | |||||||||| |||||||    
T  12083167 actaaaaatataaatgtttgtttctttccaattataacaaatcaaataa 12083119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 114 - 158
Target Start/End: Complemental strand, 14000630 - 14000586
Alignment:
Q  114 ctaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||| |||||| ||||||| |||||||||||||||    
T  14000630 ctaaaaatataaatatttgttgctttcaagttataacaaaccaaa 14000586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 156
Target Start/End: Original strand, 17915973 - 17916016
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaacca 156  Q
    ||||||||| |||||||||||| ||||||| |||||||||||||    
T  17915973 actaaaaatttaaatgtttgttgctttcaagttataacaaacca 17916016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 158
Target Start/End: Original strand, 7464028 - 7464070
Alignment:
Q  116 aaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    ||||||| ||||||||||| ||||||| |||||||||||||||    
T  7464028 aaaaatacaaatgtttgttgctttcaagttataacaaaccaaa 7464070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 154
Target Start/End: Original strand, 7938035 - 7938073
Alignment:
Q  116 aaaaatataaatgtttgttactttcaatttataacaaac 154  Q
    ||||||||||||||||||| ||||||| |||||||||||    
T  7938035 aaaaatataaatgtttgttgctttcaagttataacaaac 7938073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 154
Target Start/End: Complemental strand, 33629331 - 33629293
Alignment:
Q  116 aaaaatataaatgtttgttactttcaatttataacaaac 154  Q
    ||||||||||||||||||| ||||||| |||||||||||    
T  33629331 aaaaatataaatgtttgttgctttcaagttataacaaac 33629293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 154
Target Start/End: Original strand, 1134560 - 1134601
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaac 154  Q
    ||||||| |||||||||||||| ||||||| |||||||||||    
T  1134560 actaaaactataaatgtttgttgctttcaagttataacaaac 1134601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 8786615 - 8786660
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||| |||||| |||||||| ||||||| |||||||||||||||    
T  8786615 actaaacatataattgtttgttgctttcaagttataacaaaccaaa 8786660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 33697255 - 33697210
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    ||||||||||||||||||||||  |||||| |||||||||| ||||    
T  33697255 actaaaaatataaatgtttgttgttttcaagttataacaaagcaaa 33697210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 153
Target Start/End: Complemental strand, 39851001 - 39850964
Alignment:
Q  116 aaaaatataaatgtttgttactttcaatttataacaaa 153  Q
    ||||||||||||||||||| ||||||| ||||||||||    
T  39851001 aaaaatataaatgtttgtttctttcaagttataacaaa 39850964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 154
Target Start/End: Complemental strand, 40494024 - 40493983
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaac 154  Q
    ||||||||||||||||||| || ||||||| |||||||||||    
T  40494024 actaaaaatataaatgtttcttgctttcaagttataacaaac 40493983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 40716388 - 40716343
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||| ||||||| ||||||| |||||||||| ||||    
T  40716388 actaaaaatataaaggtttgtttctttcaagttataacaaatcaaa 40716343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 42097654 - 42097609
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||| |||||||||||||||  ||||||||||||||||| ||||    
T  42097654 actaaagatataaatgtttgttgttttcaatttataacaaatcaaa 42097609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000005; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 24005002 - 24005047
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||    
T  24005002 actaaaaatataaatgtttgttgctttcaagttataacaaaccaaa 24005047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 119 - 158
Target Start/End: Original strand, 24791811 - 24791850
Alignment:
Q  119 aatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  24791811 aatataaatgtttgttactttcaaattataacaaaccaaa 24791850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 158
Target Start/End: Complemental strand, 5880953 - 5880911
Alignment:
Q  116 aaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    ||||||||||||||||||| ||||||| |||||||||||||||    
T  5880953 aaaaatataaatgtttgttgctttcaaattataacaaaccaaa 5880911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 159
Target Start/End: Complemental strand, 20718190 - 20718144
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaat 159  Q
    |||||||||||||||||||||| ||||| | ||||||||||||||||    
T  20718190 actaaaaatataaatgtttgttgctttctagttataacaaaccaaat 20718144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 159
Target Start/End: Original strand, 34576315 - 34576361
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaat 159  Q
    |||||||||||||||||||||| ||||| | ||||||||||||||||    
T  34576315 actaaaaatataaatgtttgttgctttctagttataacaaaccaaat 34576361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 159
Target Start/End: Original strand, 40301520 - 40301566
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaat 159  Q
    |||||||||||||||||||||| ||||||| ||||||||||| ||||    
T  40301520 actaaaaatataaatgtttgtttctttcaagttataacaaactaaat 40301566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 159
Target Start/End: Complemental strand, 42185974 - 42185928
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaat 159  Q
    ||||||||||||||||||||||  |||||| ||||||||||||||||    
T  42185974 actaaaaatataaatgtttgttgttttcaagttataacaaaccaaat 42185928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 159
Target Start/End: Complemental strand, 42949896 - 42949850
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaat 159  Q
    ||||||||||||||| |||||| ||||||| ||||||||||||||||    
T  42949896 actaaaaatataaatatttgttgctttcaagttataacaaaccaaat 42949850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 9779612 - 9779657
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    ||||||||||||||| |||||| ||||||| |||||||||||||||    
T  9779612 actaaaaatataaatttttgttgctttcaagttataacaaaccaaa 9779657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 154
Target Start/End: Original strand, 32689959 - 32690000
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaac 154  Q
    |||||||||||||||||||||| ||||||| |||||||||||    
T  32689959 actaaaaatataaatgtttgttgctttcaagttataacaaac 32690000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 33133579 - 33133624
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||||| |||| || |||||||||||||||    
T  33133579 actaaaaatataaatgtttgttgctttgaagttataacaaaccaaa 33133624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 34063390 - 34063345
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||||| |||||||  ||||||||||||||    
T  34063390 actaaaaatataaatgtttgttgctttcaaactataacaaaccaaa 34063345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 37610162 - 37610117
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||||| ||||||| |||||||||| ||||    
T  37610162 actaaaaatataaatgtttgttgctttcaagttataacaaatcaaa 37610117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 37867748 - 37867703
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||||| ||||||| |||||||||| ||||    
T  37867748 actaaaaatataaatgtttgttgctttcaagttataacaaatcaaa 37867703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 158
Target Start/End: Complemental strand, 38147778 - 38147741
Alignment:
Q  121 tataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||||| |||||||||||||||    
T  38147778 tataaatgtttgttactttcaagttataacaaaccaaa 38147741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 38692751 - 38692706
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||||| |||| || |||||||||||||||    
T  38692751 actaaaaatataaatgtttgttgctttgaagttataacaaaccaaa 38692706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 39271512 - 39271557
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||| ||||||||||| ||||||| |||||||||||||||    
T  39271512 actaaaaatacaaatgtttgttgctttcaagttataacaaaccaaa 39271557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 41122834 - 41122789
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||||| ||||||| |||||||||| ||||    
T  41122834 actaaaaatataaatgtttgttgctttcaagttataacaaatcaaa 41122789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 158
Target Start/End: Original strand, 37498465 - 37498505
Alignment:
Q  118 aaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    ||||||||||||||||||||||||| |||||||||| ||||    
T  37498465 aaatataaatgtttgttactttcaaattataacaaatcaaa 37498505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 158
Target Start/End: Original strand, 30874372 - 30874415
Alignment:
Q  115 taaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||| ||||||||||||| |||||| ||||||||    
T  30874372 taaaaatataaatgcttgttactttcaaattataataaaccaaa 30874415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 152
Target Start/End: Complemental strand, 42082758 - 42082719
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaa 152  Q
    |||||||||||||||||||||| ||||||| |||||||||    
T  42082758 actaaaaatataaatgtttgttgctttcaagttataacaa 42082719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 159
Target Start/End: Original strand, 3357258 - 3357304
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaat 159  Q
    ||||||| |||||||||||||| ||||||| ||||||||||| ||||    
T  3357258 actaaaactataaatgtttgtttctttcaaattataacaaacaaaat 3357304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 159
Target Start/End: Original strand, 7929468 - 7929510
Alignment:
Q  117 aaaatataaatgtttgttactttcaatttataacaaaccaaat 159  Q
    |||||||||||||||||| ||||| | ||||||||||||||||    
T  7929468 aaaatataaatgtttgttgctttctagttataacaaaccaaat 7929510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 158
Target Start/End: Complemental strand, 19039985 - 19039943
Alignment:
Q  116 aaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    ||||||||||||||||||| ||||||| |||||||||| ||||    
T  19039985 aaaaatataaatgtttgttgctttcaagttataacaaatcaaa 19039943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 1111255 - 1111211
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||||| ||||||| |||||||||| ||||    
T  1111255 actaaaaatataaatgtttgttgctttcaa-ttataacaaatcaaa 1111211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 15265735 - 15265690
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||| |||||| |||||| ||||||| |||||||||||||||    
T  15265735 actaaaaacataaatctttgttgctttcaagttataacaaaccaaa 15265690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 154
Target Start/End: Complemental strand, 17372571 - 17372530
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaac 154  Q
    ||||||||||||||| |||||| ||||||| |||||||||||    
T  17372571 actaaaaatataaatatttgttgctttcaagttataacaaac 17372530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 154
Target Start/End: Original strand, 31593413 - 31593454
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaac 154  Q
    |||||||||||||||||||||| |||||||  ||||||||||    
T  31593413 actaaaaatataaatgtttgttgctttcaagatataacaaac 31593454  T

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Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 42060311 - 42060356
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    ||||||||||||||||||||||  ||||||  ||||||||||||||    
T  42060311 actaaaaatataaatgtttgttgttttcaagatataacaaaccaaa 42060356  T

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Target: chr6 (Bit Score: 36; Significance: 0.00000000008; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 115 - 158
Target Start/End: Original strand, 31203946 - 31203989
Alignment:
Q  115 taaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||| ||||||| |||||||||||||||    
T  31203946 taaaaatataaatgtttgttgctttcaagttataacaaaccaaa 31203989  T

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Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 10460275 - 10460230
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    ||||||| |||||||||||||| ||||||| |||||||||||||||    
T  10460275 actaaaattataaatgtttgttgctttcaagttataacaaaccaaa 10460230  T

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Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 163
Target Start/End: Complemental strand, 14439774 - 14439729
Alignment:
Q  118 aaatataaatgtttgttactttcaatttataacaaaccaaataaga 163  Q
    ||||||||||||||||| ||||||| ||||||||||||||| ||||    
T  14439774 aaatataaatgtttgtttctttcaaattataacaaaccaaacaaga 14439729  T

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Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 161
Target Start/End: Original strand, 22534978 - 22535019
Alignment:
Q  120 atataaatgtttgttactttcaatttataacaaaccaaataa 161  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  22534978 atataaatgtttgttattttcaacttataacaaaccaaataa 22535019  T

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Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 26252855 - 26252900
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||||| ||||||| |||||||||| ||||    
T  26252855 actaaaaatataaatgtttgttgctttcaagttataacaaatcaaa 26252900  T

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Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 159
Target Start/End: Complemental strand, 11646698 - 11646654
Alignment:
Q  115 taaaaatataaatgtttgttactttcaatttataacaaaccaaat 159  Q
    |||||||||||||||||||| ||||||| ||||||||||| ||||    
T  11646698 taaaaatataaatgtttgttgctttcaaattataacaaactaaat 11646654  T

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Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 161
Target Start/End: Complemental strand, 24062774 - 24062726
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaataa 161  Q
    ||||||||||||||||| ||||  |||||| ||||||||||||||||||    
T  24062774 actaaaaatataaatgtatgttgatttcaagttataacaaaccaaataa 24062726  T

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Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 153
Target Start/End: Complemental strand, 31862008 - 31861968
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaa 153  Q
    |||||||||||||||||||||| ||||||| ||||||||||    
T  31862008 actaaaaatataaatgtttgttgctttcaagttataacaaa 31861968  T

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Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 159
Target Start/End: Complemental strand, 10587621 - 10587586
Alignment:
Q  124 aaatgtttgttactttcaatttataacaaaccaaat 159  Q
    ||||||||||||||||||| ||||||||||||||||    
T  10587621 aaatgtttgttactttcaaattataacaaaccaaat 10587586  T

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Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 154
Target Start/End: Original strand, 10266873 - 10266907
Alignment:
Q  120 atataaatgtttgttactttcaatttataacaaac 154  Q
    ||||||||||||||||||||||| |||||||||||    
T  10266873 atataaatgtttgttactttcaaattataacaaac 10266907  T

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Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 103
Target Start/End: Complemental strand, 3823989 - 3823956
Alignment:
Q  70 atgtttatgtggtcacaaccacaaattaaaatga 103  Q
    |||||| |||||||||||||||||||||||||||    
T  3823989 atgtttgtgtggtcacaaccacaaattaaaatga 3823956  T

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Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 3833790 - 3833835
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    ||||||||||||||||||||||  |||||| |||||||||| ||||    
T  3833790 actaaaaatataaatgtttgttgttttcaagttataacaaatcaaa 3833835  T

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Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 158
Target Start/End: Complemental strand, 14965390 - 14965349
Alignment:
Q  117 aaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||| ||||||| |||||||||| ||||    
T  14965390 aaaatataaatgtttgttgctttcaagttataacaaatcaaa 14965349  T

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Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 154
Target Start/End: Complemental strand, 17353267 - 17353226
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaac 154  Q
    ||||||| |||||||||||||| ||||||| |||||||||||    
T  17353267 actaaaattataaatgtttgttgctttcaagttataacaaac 17353226  T

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Target: scaffold0583 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0583
Description:

Target: scaffold0583; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 159
Target Start/End: Original strand, 955 - 1001
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaat 159  Q
    |||||||||||||||||||||| ||||| | ||||||||||||||||    
T  955 actaaaaatataaatgtttgttgctttctagttataacaaaccaaat 1001  T

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Target: scaffold0097 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 113 - 159
Target Start/End: Complemental strand, 22027 - 21981
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaat 159  Q
    |||||||||||||||||||||| ||||| | ||||||||||||||||    
T  22027 actaaaaatataaatgtttgttgctttctagttataacaaaccaaat 21981  T

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Target: scaffold0137 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 6836 - 6881
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||||| |||| || |||||||||||||||    
T  6836 actaaaaatataaatgtttgttgcttttaagttataacaaaccaaa 6881  T

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Target: scaffold0063 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 158
Target Start/End: Complemental strand, 33070 - 33025
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||||||||||||||| ||||||| |||||||||| ||||    
T  33070 actaaaaatataaatgtttgttgctttcaagttataacaaagcaaa 33025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1379 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 158
Target Start/End: Original strand, 1581 - 1621
Alignment:
Q  118 aaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    ||||||||||||||||| ||||||| |||||||||||||||    
T  1581 aaatataaatgtttgttgctttcaagttataacaaaccaaa 1621  T

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Target: scaffold0294 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 113 - 153
Target Start/End: Complemental strand, 1702 - 1662
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaa 153  Q
    ||||||||||||||||||||||| |||||| ||||||||||    
T  1702 actaaaaatataaatgtttgttattttcaaattataacaaa 1662  T

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Target: scaffold0081 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 114 - 158
Target Start/End: Original strand, 12434 - 12478
Alignment:
Q  114 ctaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    ||||||||||||||||||||| ||||||| |||||| ||||||||    
T  12434 ctaaaaatataaatgtttgttgctttcaagttataataaaccaaa 12478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 16535 - 16580
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    |||||||||| ||||||||||  ||||||| |||||||||||||||    
T  16535 actaaaaatagaaatgtttgtggctttcaagttataacaaaccaaa 16580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 21420 - 21465
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    ||||||||||| |||||||||| ||||||| |||||||||| ||||    
T  21420 actaaaaatattaatgtttgttgctttcaagttataacaaatcaaa 21465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 156
Target Start/End: Original strand, 57528 - 57569
Alignment:
Q  115 taaaaatataaatgtttgttactttcaatttataacaaacca 156  Q
    ||||||||||||||||| |||||||||| |||| ||||||||    
T  57528 taaaaatataaatgtttattactttcaagttatgacaaacca 57569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 158
Target Start/End: Original strand, 66215 - 66260
Alignment:
Q  113 actaaaaatataaatgtttgttactttcaatttataacaaaccaaa 158  Q
    ||||||||||||||||||||||||| |||| |||||| ||| ||||    
T  66215 actaaaaatataaatgtttgttactgtcaagttataaaaaatcaaa 66260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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