View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19358_low_127 (Length: 254)
Name: NF19358_low_127
Description: NF19358
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19358_low_127 |
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Alignment Details
Target: chr1 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 19 - 250
Target Start/End: Original strand, 26106795 - 26107026
Alignment:
| Q |
19 |
ttaaaaccatagtatgattatatgaaatgaaatggcaaaagttgaaaagaatgtttcatgtcatcaaacagattttgataaagaaattacaaagtacttt |
118 |
Q |
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| T |
26106795 |
ttaaaaccatagtatgattatatgaaatgaaatggcaaaagttgaaaagaatgtttcatgtcatctgacagattttgataaagaaattacaaagtacttt |
26106894 |
T |
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| Q |
119 |
gtgaacaatattgcacaagaaatcacaaagtaatagcttacaatacacagatgccagcaaatagtagatacaatgtcaattacaatttcttttttggact |
218 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
26106895 |
gtgaacaatattgcacaagaaatcacaaagtaatagcttacaatacacagatgccagcaaataatagatacaatgtcaattacaatttcttttttggact |
26106994 |
T |
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| Q |
219 |
aagtttacaattttaatgttttcatctcactc |
250 |
Q |
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|||||||||||||||||||| ||||| ||||| |
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| T |
26106995 |
aagtttacaattttaatgttgtcatcacactc |
26107026 |
T |
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