View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19358_low_17 (Length: 525)
Name: NF19358_low_17
Description: NF19358
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19358_low_17 |
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Alignment Details
Target: chr8 (Bit Score: 432; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 432; E-Value: 0
Query Start/End: Original strand, 1 - 481
Target Start/End: Complemental strand, 7665027 - 7664539
Alignment:
| Q |
1 |
tgtgataatcaagggcatgttgttgatcaatcaaataagagacatggaacaagtagttttggtagtaaggataattttgaatttggcatctcctaagtat |
100 |
Q |
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| T |
7665027 |
tgtgataatcaagggcatgttgttgatcaatcaaataagagacatggaacaagtagttttggtagtaaggataattttgaatttggcatctcctaagtat |
7664928 |
T |
|
| Q |
101 |
taattaatttaacagttaggtaaaaattcagatatatgctgtgtttagtggaaaattggttgtgccattatttggcttttcaaattcacatgacaatttg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7664927 |
taattaatttaacagttaggtaaaaattcagatatatgttgtgtttagtggaaaattggttgtgccattatttggcttttcaaattcacatgacaatttg |
7664828 |
T |
|
| Q |
201 |
tgggtttgggacatgtcacatgtgtagattaggaacatgtacaggtaagtttagtgatatctcaattataggacaaaactttgaagatgtttcagaacaa |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
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| T |
7664827 |
tgggtttgggacatgtcacatgtgtagattaggaacatgtacaggtaagtttagtgatatctcaattataggacaaaactttgaagatgtttcagaacta |
7664728 |
T |
|
| Q |
301 |
--------attatgtttctttgtgtaacttcttttagtcaatgatgtagaatatcttcatattttctaagtttctttggtagcatcatattagaaaacat |
392 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
7664727 |
tttgttctgttatctttctttgtgtaacttcttttagtcaatgatgtagaatatcttcatattttctaagtttctttggtagcatcacattagaaaacat |
7664628 |
T |
|
| Q |
393 |
attgtacttccaacactgttcttatattgcaattgcgatattaacggatcttactaaccactgtctcagggataatggttaagaaatac |
481 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| |
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| T |
7664627 |
attgtacttccaacactgttcttatattgcaattgcgatattaacgggtcttactaaccagtgtctcagggataatggttaagaaatac |
7664539 |
T |
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