View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19358_low_34 (Length: 433)
Name: NF19358_low_34
Description: NF19358
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19358_low_34 |
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Alignment Details
Target: chr7 (Bit Score: 321; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 321; E-Value: 0
Query Start/End: Original strand, 6 - 367
Target Start/End: Complemental strand, 39830312 - 39829951
Alignment:
| Q |
6 |
aaatcccaattcagtcattgnnnnnnngagagtaagtctttaagaaaaataaattagaacaatttatgtacttatattggtatatcttatgtttttattg |
105 |
Q |
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| T |
39830312 |
aaatcccaattcagtcattgaaaaaaagagagtaagtctttaagaaaaataaattagaacaatttatgtacttatattggtatatcttatgtttttattg |
39830213 |
T |
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| Q |
106 |
aatagttaaaatcggtttagaccactattaactttgctcataaaaaaggttacccgatgatatggtgagaaagtgatttgtctcaagtactggtttaatc |
205 |
Q |
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| T |
39830212 |
aatagttaaaatcggtttagaccactattaactttgctcataaaaaaggttacctgatgatatggtgagaaagtgatttgtctcaagtactggtttaatc |
39830113 |
T |
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| Q |
206 |
attttcatcaaatgattgagtttcttgtcatctttgcataacatgacgtaatttttattgaagttatgtcttccatgcaatttaaagtttctcaaaagaa |
305 |
Q |
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| T |
39830112 |
attttcatcaaatgattgagtttcttgtcatctttgcataacatgacgtaatttttgttgaagttatatcttccatgcaatttaaagtttctcaaaagaa |
39830013 |
T |
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| Q |
306 |
aatcttaggctgataattggcctccatgaatatttatcaaagttaatacttaattaaattat |
367 |
Q |
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| T |
39830012 |
aatcttaggctgataattggcctctatgaatatttatcaaagttaatacttaatgaaattat |
39829951 |
T |
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