View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19358_low_52 (Length: 394)
Name: NF19358_low_52
Description: NF19358
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19358_low_52 |
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Alignment Details
Target: chr7 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 13 - 380
Target Start/End: Complemental strand, 34384848 - 34384473
Alignment:
| Q |
13 |
aatatctcaaatgatttcatcctatactgtcttataaccca----------atccaatccaaacctattcaaagatttaaaaataatttcatagagtaat |
102 |
Q |
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| T |
34384848 |
aatatctcaaatgatttcatcctatactgtcttataacccataccaatccaatccaatccaaacctattcaaagatttaaaaataatttcatagagtaat |
34384749 |
T |
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| Q |
103 |
atacaacatgagacaaaattaatccatcaaccaagttatatatcaaagtgaaaagaagaatatttgaagcaatataccccctcaactccttcttttataa |
202 |
Q |
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| T |
34384748 |
atacaacatgagacaaaattaatccatcaaccaagttatatatcaaagtgaaaagaagaatatttgaagcaatataccccctcaactccttcttttataa |
34384649 |
T |
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| Q |
203 |
aactaaggaagaacattaaaaaaatcaatttattnnnnnnnnnnnnnnncagccaaagtactcatcaaatgaattcgtttaannnnnnnnnnaaactcga |
302 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| |
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| T |
34384648 |
aactaaggaagaacattaaaaaaatcaatttatt--aaaaaaaaaaaaacagccaaagtactcatcaaatgaattcgtttaattttttttttaaactcga |
34384551 |
T |
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| Q |
303 |
tattcagtcctaggaacgactaatccgggaaccaattccaccacccactagaggctcaattgaagctagtactatgtg |
380 |
Q |
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| T |
34384550 |
tattcagtcctaggaacgactaatccggggaccaattccaccgcccactagaggctcaattgaagctagtactatgtg |
34384473 |
T |
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