View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19358_low_55 (Length: 379)

Name: NF19358_low_55
Description: NF19358
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19358_low_55
NF19358_low_55
[»] chr3 (25 HSPs)
chr3 (12-175)||(13945896-13946059)
chr3 (12-173)||(13908953-13909114)
chr3 (12-172)||(13939413-13939573)
chr3 (39-172)||(4676602-4676735)
chr3 (39-175)||(8743514-8743650)
chr3 (39-172)||(8761684-8761817)
chr3 (39-175)||(41180049-41180185)
chr3 (39-173)||(41174913-41175047)
chr3 (46-175)||(44779822-44779952)
chr3 (46-174)||(44774639-44774768)
chr3 (14-175)||(16383476-16383640)
chr3 (97-172)||(16323545-16323621)
chr3 (7-175)||(12273609-12273781)
chr3 (107-172)||(17199743-17199808)
chr3 (141-172)||(4679409-4679440)
chr3 (130-173)||(17706554-17706597)
chr3 (134-172)||(11851471-11851509)
chr3 (93-172)||(14569188-14569269)
chr3 (134-172)||(20187027-20187065)
chr3 (135-172)||(13435099-13435136)
chr3 (145-174)||(14649018-14649047)
chr3 (145-174)||(45221533-45221562)
chr3 (136-172)||(12254522-12254558)
chr3 (58-172)||(13037604-13037720)
chr3 (58-172)||(13043969-13044085)
[»] chr6 (17 HSPs)
chr6 (12-172)||(33682795-33682955)
chr6 (170-363)||(7974797-7974998)
chr6 (39-172)||(13196775-13196908)
chr6 (39-172)||(23834497-23834630)
chr6 (39-173)||(14032579-14032713)
chr6 (45-172)||(27563150-27563277)
chr6 (45-173)||(28360470-28360600)
chr6 (94-173)||(21717615-21717696)
chr6 (94-173)||(21725451-21725532)
chr6 (139-173)||(29096179-29096213)
chr6 (134-175)||(5295351-5295392)
chr6 (94-173)||(1592182-1592263)
chr6 (145-175)||(7428729-7428759)
chr6 (98-172)||(19726004-19726081)
chr6 (145-175)||(24514582-24514612)
chr6 (139-172)||(9100779-9100812)
chr6 (145-174)||(14595420-14595449)
[»] chr4 (23 HSPs)
chr4 (12-172)||(15797410-15797570)
chr4 (12-173)||(636356-636518)
chr4 (39-172)||(41800557-41800690)
chr4 (39-172)||(42700664-42700797)
chr4 (39-175)||(53749358-53749494)
chr4 (39-175)||(51602678-51602816)
chr4 (39-171)||(51608559-51608693)
chr4 (7-172)||(14508510-14508678)
chr4 (14-172)||(20939681-20939840)
chr4 (16-172)||(30237130-30237291)
chr4 (12-175)||(14992252-14992420)
chr4 (16-172)||(13443589-13443750)
chr4 (129-173)||(14479863-14479907)
chr4 (136-174)||(16220630-16220668)
chr4 (135-173)||(16750270-16750308)
chr4 (135-173)||(23120993-23121031)
chr4 (135-172)||(11171989-11172026)
chr4 (12-134)||(15005599-15005726)
chr4 (136-173)||(17000911-17000948)
chr4 (136-172)||(14062313-14062349)
chr4 (136-172)||(15154090-15154126)
chr4 (170-209)||(17480931-17480971)
chr4 (134-174)||(23725547-23725587)
[»] chr7 (22 HSPs)
chr7 (12-175)||(23202094-23202257)
chr7 (12-175)||(23508221-23508384)
chr7 (39-172)||(11632546-11632679)
chr7 (39-173)||(807603-807738)
chr7 (39-172)||(20580548-20580681)
chr7 (39-175)||(23073646-23073783)
chr7 (39-172)||(18056316-18056449)
chr7 (39-175)||(18049837-18049972)
chr7 (32-175)||(14145889-14146035)
chr7 (12-172)||(14431404-14431567)
chr7 (12-173)||(14583277-14583443)
chr7 (94-173)||(15338235-15338316)
chr7 (145-178)||(10308747-10308780)
chr7 (136-172)||(35963481-35963517)
chr7 (94-173)||(15723903-15723984)
chr7 (135-172)||(1612017-1612054)
chr7 (135-172)||(14321332-14321369)
chr7 (145-174)||(38827089-38827118)
chr7 (145-173)||(11395449-11395477)
chr7 (145-173)||(16089390-16089418)
chr7 (66-174)||(19144938-19145045)
chr7 (66-174)||(20744337-20744444)
[»] scaffold0596 (1 HSPs)
scaffold0596 (12-173)||(131-292)
[»] chr5 (14 HSPs)
chr5 (12-172)||(22174549-22174709)
chr5 (12-175)||(17265386-17265549)
chr5 (12-173)||(17271868-17272029)
chr5 (39-173)||(21678871-21679005)
chr5 (12-171)||(15194663-15194827)
chr5 (139-173)||(24931635-24931669)
chr5 (94-172)||(22509854-22509934)
chr5 (133-173)||(6728995-6729035)
chr5 (136-172)||(22759946-22759982)
chr5 (136-174)||(758993-759031)
chr5 (93-172)||(21905999-21906078)
chr5 (145-175)||(22466094-22466124)
chr5 (134-172)||(30344891-30344929)
chr5 (135-173)||(34828399-34828437)
[»] scaffold0211 (1 HSPs)
scaffold0211 (12-172)||(29718-29878)
[»] scaffold0014 (1 HSPs)
scaffold0014 (12-172)||(347-508)
[»] chr2 (15 HSPs)
chr2 (12-173)||(27296596-27296757)
chr2 (39-175)||(12571746-12571882)
chr2 (39-175)||(12578228-12578364)
chr2 (39-175)||(27790343-27790487)
chr2 (39-172)||(27785125-27785266)
chr2 (135-180)||(26883518-26883563)
chr2 (136-175)||(23296908-23296947)
chr2 (170-209)||(31525041-31525080)
chr2 (145-173)||(8891-8919)
chr2 (145-173)||(8688167-8688195)
chr2 (136-172)||(19792020-19792056)
chr2 (136-172)||(24942795-24942831)
chr2 (136-172)||(25036836-25036872)
chr2 (136-172)||(25040943-25040979)
chr2 (145-173)||(29280310-29280338)
[»] chr8 (21 HSPs)
chr8 (39-173)||(1805099-1805233)
chr8 (12-172)||(9273775-9273936)
chr8 (39-175)||(31568439-31568575)
chr8 (39-173)||(18682132-18682267)
chr8 (39-174)||(31573660-31573795)
chr8 (39-172)||(36798813-36798947)
chr8 (45-172)||(2373996-2374125)
chr8 (70-173)||(18727725-18727829)
chr8 (130-175)||(22055167-22055212)
chr8 (136-175)||(21322995-21323034)
chr8 (136-175)||(22176637-22176676)
chr8 (135-173)||(22064329-22064367)
chr8 (135-173)||(29644331-29644369)
chr8 (130-175)||(22049649-22049694)
chr8 (139-172)||(23771202-23771235)
chr8 (141-170)||(44430780-44430809)
chr8 (136-172)||(8415675-8415711)
chr8 (135-175)||(22026718-22026758)
chr8 (145-173)||(23373770-23373798)
chr8 (13-41)||(31568423-31568451)
chr8 (13-41)||(31573644-31573672)
[»] scaffold0076 (1 HSPs)
scaffold0076 (12-172)||(61323-61483)
[»] scaffold0039 (1 HSPs)
scaffold0039 (12-172)||(94338-94498)
[»] scaffold0013 (1 HSPs)
scaffold0013 (12-172)||(111362-111522)
[»] chr1 (11 HSPs)
chr1 (12-172)||(27279616-27279777)
chr1 (7-145)||(21697549-21697692)
chr1 (136-173)||(2341759-2341796)
chr1 (12-172)||(23630340-23630505)
chr1 (133-175)||(19858558-19858600)
chr1 (145-174)||(21704591-21704620)
chr1 (107-176)||(52990025-52990093)
chr1 (145-173)||(20032744-20032772)
chr1 (93-170)||(21734889-21734968)
chr1 (145-173)||(23067456-23067484)
chr1 (136-172)||(29555182-29555218)
[»] scaffold0015 (2 HSPs)
scaffold0015 (17-172)||(60343-60499)
scaffold0015 (136-172)||(172550-172586)
[»] scaffold0124 (2 HSPs)
scaffold0124 (39-172)||(8965-9098)
scaffold0124 (39-172)||(44635-44767)
[»] scaffold0100 (1 HSPs)
scaffold0100 (12-172)||(110-271)
[»] scaffold0001 (3 HSPs)
scaffold0001 (12-172)||(525473-525633)
scaffold0001 (101-173)||(178841-178914)
scaffold0001 (135-172)||(494729-494766)
[»] scaffold1914 (1 HSPs)
scaffold1914 (56-175)||(146-263)
[»] scaffold1311 (1 HSPs)
scaffold1311 (7-172)||(1725-1892)
[»] scaffold1156 (1 HSPs)
scaffold1156 (119-173)||(4-58)
[»] scaffold0326 (3 HSPs)
scaffold0326 (12-172)||(6042-6207)
scaffold0326 (12-172)||(13944-14109)
scaffold0326 (134-172)||(16990-17028)
[»] scaffold0046 (1 HSPs)
scaffold0046 (107-175)||(79093-79161)
[»] scaffold0065 (1 HSPs)
scaffold0065 (108-175)||(28494-28561)
[»] scaffold0005 (2 HSPs)
scaffold0005 (136-175)||(264496-264535)
scaffold0005 (136-172)||(258134-258170)
[»] scaffold0003 (2 HSPs)
scaffold0003 (94-173)||(194501-194582)
scaffold0003 (141-174)||(136775-136808)
[»] scaffold0546 (1 HSPs)
scaffold0546 (136-173)||(10498-10535)
[»] scaffold0109 (1 HSPs)
scaffold0109 (136-173)||(1266-1303)
[»] scaffold0053 (3 HSPs)
scaffold0053 (107-175)||(63594-63662)
scaffold0053 (107-175)||(64291-64359)
scaffold0053 (145-175)||(81215-81245)
[»] scaffold0462 (1 HSPs)
scaffold0462 (72-172)||(10011-10111)
[»] scaffold0149 (1 HSPs)
scaffold0149 (136-175)||(39076-39115)
[»] scaffold0074 (1 HSPs)
scaffold0074 (136-175)||(16338-16377)
[»] scaffold0067 (3 HSPs)
scaffold0067 (136-175)||(48179-48218)
scaffold0067 (136-175)||(57213-57252)
scaffold0067 (136-175)||(63599-63638)
[»] scaffold0679 (1 HSPs)
scaffold0679 (145-175)||(40-70)
[»] scaffold0235 (2 HSPs)
scaffold0235 (145-175)||(7476-7506)
scaffold0235 (145-175)||(17690-17720)
[»] scaffold0213 (1 HSPs)
scaffold0213 (98-172)||(6632-6709)
[»] scaffold0098 (1 HSPs)
scaffold0098 (145-175)||(26727-26757)
[»] scaffold0025 (1 HSPs)
scaffold0025 (130-172)||(16186-16228)
[»] scaffold0023 (1 HSPs)
scaffold0023 (94-172)||(21148-21228)
[»] scaffold0609 (1 HSPs)
scaffold0609 (145-174)||(626-655)
[»] scaffold0244 (1 HSPs)
scaffold0244 (7-175)||(20024-20198)
[»] scaffold0220 (1 HSPs)
scaffold0220 (135-172)||(9755-9792)
[»] scaffold0160 (1 HSPs)
scaffold0160 (136-173)||(7568-7605)
[»] scaffold0126 (1 HSPs)
scaffold0126 (136-173)||(37797-37834)
[»] scaffold0108 (1 HSPs)
scaffold0108 (12-172)||(44871-45035)
[»] scaffold0063 (1 HSPs)
scaffold0063 (135-172)||(13407-13444)
[»] scaffold0021 (1 HSPs)
scaffold0021 (136-173)||(140728-140765)
[»] scaffold0706 (1 HSPs)
scaffold0706 (136-172)||(4067-4103)
[»] scaffold0503 (1 HSPs)
scaffold0503 (93-172)||(3180-3259)
[»] scaffold0331 (1 HSPs)
scaffold0331 (12-108)||(17966-18065)
[»] scaffold0258 (1 HSPs)
scaffold0258 (145-173)||(24930-24958)
[»] scaffold0155 (1 HSPs)
scaffold0155 (145-173)||(196-224)
[»] scaffold0011 (3 HSPs)
scaffold0011 (16-108)||(146470-146564)
scaffold0011 (136-172)||(151778-151814)
scaffold0011 (136-172)||(257898-257934)


Alignment Details
Target: chr3 (Bit Score: 156; Significance: 9e-83; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 156; E-Value: 9e-83
Query Start/End: Original strand, 12 - 175
Target Start/End: Complemental strand, 13946059 - 13945896
Alignment:
Q  12 gaagaatattccgctgcagtttaatgaagttttatgaaggatgttgttaaatagttttaatctatttaagaatttatgtttagtagtgtgacatgccgtt 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13946059 gaagaatattccgctgcagtttaatgaagttttatgaaggatgttgttaaatagttttaatctatttaagaatttatgtttagtagtgtgacatgccgtt 13945960  T
Q  112 tggtgttgaactctgattttataattataattaaattgattttgggaaacggggtgttacaatt 175  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  13945959 tggtgttgaactctgattttataattataattaaatttattttgggaaacggcgtgttacaatt 13945896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 12 - 173
Target Start/End: Complemental strand, 13909114 - 13908953
Alignment:
Q  12 gaagaatattccgctgcagtttaatgaagttttatgaaggatgttgttaaatagttttaatctatttaagaatttatgtttagtagtgtgacatgccgtt 111  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  13909114 gaagaatattccgctgcagtttaatgaagttttacgaaggatgttgttaaatagttttaatctatttaagaatttatgtttagtagtgtgacatgccgat 13909015  T
Q  112 tggtgttgaactctgattttataattataattaaattgattttgggaaacggggtgttacaa 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13909014 tggtgttgaactctgattttataattataattaaattgattttgggaaacggggtgttacaa 13908953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 12 - 172
Target Start/End: Complemental strand, 13939573 - 13939413
Alignment:
Q  12 gaagaatattccgctgcagtttaatgaagttttatgaaggatgttgttaaatagttttaatctatttaagaatttatgtttagtagtgtgacatgccgtt 111  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13939573 gaagaacattccgctgcagtttaatgaagttttatgaaggatgttgttaaatagttttaatctatttaagaatttatgtttagtagtgtgacatgccgtt 13939474  T
Q  112 tggtgttgaactctgattttataattataattaaattgattttgggaaacggggtgttaca 172  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  13939473 tggtgttgaactctgattttataattataattaaattgattttgggaaacgaggtgttaca 13939413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 39 - 172
Target Start/End: Complemental strand, 4676735 - 4676602
Alignment:
Q  39 agttttatgaaggatgttgttaaatagttttaatctatttaagaatttatgtttagtagtgtgacatgccgtttggtgttgaactctgattttataatta 138  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||  ||| ||||||||||||||||||||    
T  4676735 agtttaatgaaggatgttgttaaatagttttaatctatttaagaatttatattttgtagtgtgacatgccgtttaatgtggaactctgattttataatta 4676636  T
Q  139 taattaaattgattttgggaaacggggtgttaca 172  Q
    ||||||||||||||||||||||||||||||||||    
T  4676635 taattaaattgattttgggaaacggggtgttaca 4676602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 39 - 175
Target Start/End: Original strand, 8743514 - 8743650
Alignment:
Q  39 agttttatgaaggatgttgttaaatagttttaatctatttaagaatttatgtttagtagtgtgacatgccgtttggtgttgaactctgattttataatta 138  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||   || ||||||||||||||||||||    
T  8743514 agtttaatgaaggatgttgttaaatagttttaatctatttaagaatttatattttgtagtgtgacatgccgtttaacgtggaactctgattttataatta 8743613  T
Q  139 taattaaattgattttgggaaacggggtgttacaatt 175  Q
    |||||||||||||||||||||||||||||||||||||    
T  8743614 taattaaattgattttgggaaacggggtgttacaatt 8743650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 39 - 172
Target Start/End: Original strand, 8761684 - 8761817
Alignment:
Q  39 agttttatgaaggatgttgttaaatagttttaatctatttaagaatttatgtttagtagtgtgacatgccgtttggtgttgaactctgattttataatta 138  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||   || ||||||||||||||||||||    
T  8761684 agtttaatgaaggatgttgttaaatagttttaatctatttaagaatttatattttatagtgtgacatgccgtttaacgtggaactctgattttataatta 8761783  T
Q  139 taattaaattgattttgggaaacggggtgttaca 172  Q
    ||||||||||||||||||||||||||||||||||    
T  8761784 taattaaattgattttgggaaacggggtgttaca 8761817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 39 - 175
Target Start/End: Complemental strand, 41180185 - 41180049
Alignment:
Q  39 agttttatgaaggatgttgttaaatagttttaatctatttaagaatttatgtttagtagtgtgacatgccgtttggtgttgaactctgattttataatta 138  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| | || ||| |||||||||||||||||||  ||| ||||||||||||||||||||    
T  41180185 agtttaatgaaggatgttgttaaatagttttaatctatttaagaaatcatattttgtagtgtgacatgccgtttaatgtggaactctgattttataatta 41180086  T
Q  139 taattaaattgattttgggaaacggggtgttacaatt 175  Q
    |||||||||| ||||||||||||||||||||||||||    
T  41180085 taattaaattaattttgggaaacggggtgttacaatt 41180049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 39 - 173
Target Start/End: Complemental strand, 41175047 - 41174913
Alignment:
Q  39 agttttatgaaggatgttgttaaatagttttaatctatttaagaatttatgtttagtagtgtgacatgccgtttggtgttgaactctgattttataatta 138  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| | || ||| |||||||||||||||||||  ||| ||||||||||||||||||||    
T  41175047 agtttaatgaaggatgttgttaaatagttttaatctatttaagaaatcatattttgtagtgtgacatgccgtttaatgtggaactctgattttataatta 41174948  T
Q  139 taattaaattgattttgggaaacggggtgttacaa 173  Q
    |||||||||| ||||||||||||||||||||||||    
T  41174947 taattaaattaattttgggaaacggggtgttacaa 41174913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 44779952 - 44779822
Alignment:
Q  46 tgaaggatgttgttaaatagttttaatctatttaagaatttatgtttagtagtgtgacatgccgtttggtgttg-aactctgattttataattataatta 144  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||| ||||||| ||||| |||||||||||||| ||||||||||    
T  44779952 tgaaggatgttgttaaatagttttaatctatttaagaatttatattttgaagtgtgacataccgtttgatgttgaaactctgattttat-attataatta 44779854  T
Q  145 aattga-ttttgggaaacggggtgttacaatt 175  Q
    |||||| |||||||||||||||||||||||||    
T  44779853 aattgatttttgggaaacggggtgttacaatt 44779822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 46 - 174
Target Start/End: Complemental strand, 44774768 - 44774639
Alignment:
Q  46 tgaaggatgttgttaaatagttttaatctatttaagaatttatgtttagtagtgtgacatgccgtttggtgttg-aactctgattttataattataatta 144  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||| ||||||| ||||| |||||||||||||| ||||||||||    
T  44774768 tgaaggatgttgttaaatagttttaatctatttaagaatttatattttgaagtgtgacataccgtttgatgttgaaactctgattttat-attataatta 44774670  T
Q  145 aattga-ttttgggaaacggggtgttacaat 174  Q
    |||||| ||||||||||||||||||||||||    
T  44774669 aattgatttttgggaaacggggtgttacaat 44774639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 14 - 175
Target Start/End: Original strand, 16383476 - 16383640
Alignment:
Q  14 agaatattccgctgcagtttaatgaagttttatgaaggatg-ttgttaaatagttt-taatctatttaagaatttatgtttagtagtgtgacatgccg-t 110  Q
    ||||||||||||||||  ||||||||||||||||||||||| || ||||||||||| || |||||||| ||| || ||   ||| ||||||||||||| |    
T  16383476 agaatattccgctgcaaattaatgaagttttatgaaggatgtttattaaatagtttatattctatttatgaaattttgaaaagttgtgtgacatgccgtt 16383575  T
Q  111 ttggtgttgaactctgattttataattataattaaattgattttgggaaacggggtgttacaatt 175  Q
    |||||| | || |||||| ||||| |||| ||| || ||||||||||||||||||||||||||||    
T  16383576 ttggtgataaaatctgatattatatttattattgaagtgattttgggaaacggggtgttacaatt 16383640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 97 - 172
Target Start/End: Original strand, 16323545 - 16323621
Alignment:
Q  97 gtgtgacatgccgttt-ggtgttgaactctgattttataattataattaaattgattttgggaaacggggtgttaca 172  Q
    |||||||||||||||| |||| | ||||||||| ||||| |||| |||||| |||||||||||||||||||||||||    
T  16323545 gtgtgacatgccgttttggtgataaactctgatattatatttattattaaagtgattttgggaaacggggtgttaca 16323621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 175
Target Start/End: Complemental strand, 12273781 - 12273609
Alignment:
Q  7 atgtcgaagaatattccgctgcagtttaatgaagttttatgaaggatg-ttgttaaatagttt--taatctatttaagaatttatgtttagtagtgtgac 103  Q
    |||| ||| ||||||| ||||||  ||| ||  ||||||||||||||| || |||||||||||  || ||||||||||||||| ||   || ||||||||    
T  12273781 atgttgaaaaatattctgctgcaaattattgttgttttatgaaggatgtttattaaatagttttatattctatttaagaatttttgaaaagcagtgtgac 12273682  T
Q  104 atgcc-gtttggtgttgaactctgattttataattataattaaattgattttgggaaacggggtgttacaatt 175  Q
    ||||| |||||||| |  |||||||| ||||| |||| ||| ||||| ||| ||  |||| | ||||||||||    
T  12273681 atgccagtttggtgatatactctgatgttatatttattatttaattgctttgggataacgagatgttacaatt 12273609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 107 - 172
Target Start/End: Original strand, 17199743 - 17199808
Alignment:
Q  107 ccgtttggtgttgaactctgattttataattataattaaattgattttgggaaacggggtgttaca 172  Q
    ||||||| |||| ||||||||| |||||||||| ||||| |  ||| |||||||||||||||||||    
T  17199743 ccgtttgatgttaaactctgatgttataattattattaattgtattatgggaaacggggtgttaca 17199808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 141 - 172
Target Start/End: Original strand, 4679409 - 4679440
Alignment:
Q  141 attaaattgattttgggaaacggggtgttaca 172  Q
    ||||||||||||||||||||||||||||||||    
T  4679409 attaaattgattttgggaaacggggtgttaca 4679440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 130 - 173
Target Start/End: Complemental strand, 17706597 - 17706554
Alignment:
Q  130 ttataattataattaaattgattttgggaaacggggtgttacaa 173  Q
    |||| ||||| ||| |||||||||||||||||||||||||||||    
T  17706597 ttattattattatttaattgattttgggaaacggggtgttacaa 17706554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 172
Target Start/End: Original strand, 11851471 - 11851509
Alignment:
Q  134 aattataattaaattgattttgggaaacggggtgttaca 172  Q
    |||||| ||| ||||||||||||||||||||||||||||    
T  11851471 aattattatttaattgattttgggaaacggggtgttaca 11851509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 172
Target Start/End: Complemental strand, 14569269 - 14569188
Alignment:
Q  93 agtagtgtgacatgccg--tttggtgttgaactctgattttataattataattaaattgattttgggaaacggggtgttaca 172  Q
    ||||||||||||||||   ||||||||| ||||||||| ||||| || | ||| ||||| ||| ||| ||||||||||||||    
T  14569269 agtagtgtgacatgcccgctttggtgttaaactctgatgttatatttgttatttaattgctttggggtaacggggtgttaca 14569188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 172
Target Start/End: Complemental strand, 20187065 - 20187027
Alignment:
Q  134 aattataattaaattgattttgggaaacggggtgttaca 172  Q
    |||||| ||| ||||||||||||||||||||||||||||    
T  20187065 aattattatttaattgattttgggaaacggggtgttaca 20187027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 172
Target Start/End: Complemental strand, 13435136 - 13435099
Alignment:
Q  135 attataattaaattgattttgggaaacggggtgttaca 172  Q
    ||||| ||| ||||||||||||||||||||||||||||    
T  13435136 attattatttaattgattttgggaaacggggtgttaca 13435099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 174
Target Start/End: Original strand, 14649018 - 14649047
Alignment:
Q  145 aattgattttgggaaacggggtgttacaat 174  Q
    ||||||||||||||||||||||||||||||    
T  14649018 aattgattttgggaaacggggtgttacaat 14649047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 174
Target Start/End: Original strand, 45221533 - 45221562
Alignment:
Q  145 aattgattttgggaaacggggtgttacaat 174  Q
    ||||||||||||||||||||||||||||||    
T  45221533 aattgattttgggaaacggggtgttacaat 45221562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 172
Target Start/End: Complemental strand, 12254558 - 12254522
Alignment:
Q  136 ttataattaaattgattttgggaaacggggtgttaca 172  Q
    |||| ||||||||||||||||| ||||||||||||||    
T  12254558 ttattattaaattgattttgggtaacggggtgttaca 12254522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 172
Target Start/End: Original strand, 13037604 - 13037720
Alignment:
Q  58 ttaaatagttttaa--tctatttaagaatttatgtttagtagtgtgacatgcc-gtttggtgttgaactctgattttataattataattaaattgatttt 154  Q
    |||||||||||||   |||||||||||| || ||   |||||||||||||||| |||||||||| ||||||||| |  || |||| ||| |||||  |||    
T  13037604 ttaaatagttttatattctatttaagaaattttgaaaagtagtgtgacatgcccgtttggtgttaaactctgatgtattatttattatttaattg--ttt 13037701  T
Q  155 ggga-aacggggtgttaca 172  Q
    |||| ||||||||||||||    
T  13037702 gggataacggggtgttaca 13037720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 172
Target Start/End: Original strand, 13043969 - 13044085
Alignment:
Q  58 ttaaatagttttaa--tctatttaagaatttatgtttagtagtgtgacatgcc-gtttggtgttgaactctgattttataattataattaaattgatttt 154  Q
    |||||||||||||   |||||||||||| || ||   |||||||||||||||| |||||||||| ||||||||| |  || |||| ||| |||||  |||    
T  13043969 ttaaatagttttatattctatttaagaaattttgaaaagtagtgtgacatgcccgtttggtgttaaactctgatgtattatttattatttaattg--ttt 13044066  T
Q  155 ggga-aacggggtgttaca 172  Q
    |||| ||||||||||||||    
T  13044067 gggataacggggtgttaca 13044085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 153; Significance: 5e-81; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 12 - 172
Target Start/End: Original strand, 33682795 - 33682955
Alignment:
Q  12 gaagaatattccgctgcagtttaatgaagttttatgaaggatgttgttaaatagttttaatctatttaagaatttatgtttagtagtgtgacatgccgtt 111  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  33682795 gaagaatattccgttgcagtttaatgaagttttatgaaggatgttgttaaatagttttaatctatttaagaatttatgtttagtagtgtgacatgctgtt 33682894  T
Q  112 tggtgttgaactctgattttataattataattaaattgattttgggaaacggggtgttaca 172  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33682895 tggtgttgaactctgattttataattataattaaattgattttgggaaacggggtgttaca 33682955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 170 - 363
Target Start/End: Original strand, 7974797 - 7974998
Alignment:
Q  170 acaattttggcattttgtcagttgagatagaacttgtggactctttat-------atatagtatctatacttatattttttacaatataacnnnnnnntt 262  Q
    ||||||| |||||||||||||||||| ||| |||||||||||||||||       ||||||||||||||||||||||||||||||||||||       ||    
T  7974797 acaatttcggcattttgtcagttgaggtaggacttgtggactctttattctttatatatagtatctatacttatattttttacaatataacaaaaaaatt 7974896  T
Q  263 attcatcactcttattatttttacacttatatttt-ttgagagacttttatactacataattgagttgtattatgaactagtgcttcaatttgttttata 361  Q
    |||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  7974897 attcataactcttattatttttacacttatatttttttgagagccttttatactacatagttgagttgtattatgaacttgtgcttcaatttgttttata 7974996  T
Q  362 tt 363  Q
    ||    
T  7974997 tt 7974998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 39 - 172
Target Start/End: Complemental strand, 13196908 - 13196775
Alignment:
Q  39 agttttatgaaggatgttgttaaatagttttaatctatttaagaatttatgtttagtagtgtgacatgccgtttggtgttgaactctgattttataatta 138  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||||||||||  ||| ||||||||||||||||||||    
T  13196908 agtttaatgaaggatgttgttaaatagttttaatctatttaagagtttatattttgtagtgtgacatgccgtttaatgtggaactctgattttataatta 13196809  T
Q  139 taattaaattgattttgggaaacggggtgttaca 172  Q
    ||||||||||||||||||||||||||||||||||    
T  13196808 taattaaattgattttgggaaacggggtgttaca 13196775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 39 - 172
Target Start/End: Complemental strand, 23834630 - 23834497
Alignment:
Q  39 agttttatgaaggatgttgttaaatagttttaatctatttaagaatttatgtttagtagtgtgacatgccgtttggtgttgaactctgattttataatta 138  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||   || ||||||||||||||||||||    
T  23834630 agtttaatgaaggatgttgttaaatagttttaatctatttaagaatttatattttgtagtgtgacatgccgtttaacgtggaactctgattttataatta 23834531  T
Q  139 taattaaattgattttgggaaacggggtgttaca 172  Q
    ||||||||||||||||||||||||||||||||||    
T  23834530 taattaaattgattttgggaaacggggtgttaca 23834497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 39 - 173
Target Start/End: Complemental strand, 14032713 - 14032579
Alignment:
Q  39 agttttatgaaggatgttgttaaatagttttaatctatttaagaatttatgtttagtagtgtgacatgccgtttggtgttgaactctgattttataatta 138  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||  ||| ||||||||||||||||  ||    
T  14032713 agtttaatgaaggatgttgttaaatagttttaatctatttaagaatttatattttgtagtgtgacatgccgtttaatgtggaactctgattttatatcta 14032614  T
Q  139 taattaaattgattttgggaaacggggtgttacaa 173  Q
    |||||||||||||||||||||||||||||||||||    
T  14032613 taattaaattgattttgggaaacggggtgttacaa 14032579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 45 - 172
Target Start/End: Original strand, 27563150 - 27563277
Alignment:
Q  45 atgaaggatgttgttaaatagttttaatctatttaagaatttatgtttagtagtgtgacatgccgtttggtgttg-aactctgattttataattataatt 143  Q
    |||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||| ||||||| ||||| |||||||||||||| |||||||||    
T  27563150 atgaaggatgttgttaaatagttttaatctatttaaaaatttatattttgtagtgtgacataccgtttgatgttgaaactctgattttat-attataatt 27563248  T
Q  144 aaattgattttgggaaacggggtgttaca 172  Q
    |||||||||||||||||||||||||||||    
T  27563249 aaattgattttgggaaacggggtgttaca 27563277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 45 - 173
Target Start/End: Original strand, 28360470 - 28360600
Alignment:
Q  45 atgaaggatgttgttaaatagttttaatctatttaagaa-tttatgtttagtagtgtgacatgccgtttggtgttg-aactctgattttataattataat 142  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| ||| | |||||||||| ||||||| ||||| |||||||||||||| ||||||||    
T  28360470 atgaaggatgttgttaaatagttttaatctatttaagaattttatattttgaagtgtgacataccgtttgatgttgaaactctgattttat-attataat 28360568  T
Q  143 taaattga-ttttgggaaacggggtgttacaa 173  Q
    |||||||| |||||||||||||||||||||||    
T  28360569 taaattgatttttgggaaacggggtgttacaa 28360600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 94 - 173
Target Start/End: Original strand, 21717615 - 21717696
Alignment:
Q  94 gtagtgtgacatgccgtttggtgttgaactctgatttt--ataattataattaaattgattttgggaaacggggtgttacaa 173  Q
    |||||||||||||||  |||| |||  |||||||| ||  | |||||| ||| |||||||||||||||||||||||||||||    
T  21717615 gtagtgtgacatgcccgttggggttttactctgatgttgaaaaattattatttaattgattttgggaaacggggtgttacaa 21717696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 94 - 173
Target Start/End: Original strand, 21725451 - 21725532
Alignment:
Q  94 gtagtgtgacatgccgtttggtgttgaactctgatttt--ataattataattaaattgattttgggaaacggggtgttacaa 173  Q
    |||||||||||||||  |||| |||  |||||||| ||  | |||||| ||| |||||||||||||||||||||||||||||    
T  21725451 gtagtgtgacatgcccgttggggttttactctgatgttgaaaaattattatttaattgattttgggaaacggggtgttacaa 21725532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 173
Target Start/End: Complemental strand, 29096213 - 29096179
Alignment:
Q  139 taattaaattgattttgggaaacggggtgttacaa 173  Q
    |||||||||||||||||||||||||||||||||||    
T  29096213 taattaaattgattttgggaaacggggtgttacaa 29096179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 134 - 175
Target Start/End: Original strand, 5295351 - 5295392
Alignment:
Q  134 aattataattaaattgattttgggaaacggggtgttacaatt 175  Q
    |||||| ||| |||||||||||||||||||||||||||||||    
T  5295351 aattattatttaattgattttgggaaacggggtgttacaatt 5295392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 173
Target Start/End: Complemental strand, 1592263 - 1592182
Alignment:
Q  94 gtagtgtgacatgccgtttggtgttgaactctgatttt--ataattataattaaattgattttgggaaacggggtgttacaa 173  Q
    |||||||||||||||  |||| |||  |||||||| ||  | |||||| ||| |||||||||||||||||| ||||||||||    
T  1592263 gtagtgtgacatgcccgttggggttttactctgatgttgaaaaattattatttaattgattttgggaaacgtggtgttacaa 1592182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 175
Target Start/End: Complemental strand, 7428759 - 7428729
Alignment:
Q  145 aattgattttgggaaacggggtgttacaatt 175  Q
    |||||||||||||||||||||||||||||||    
T  7428759 aattgattttgggaaacggggtgttacaatt 7428729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 172
Target Start/End: Complemental strand, 19726081 - 19726004
Alignment:
Q  98 tgtgacatgcc-gtttggtgttgaactctgatttt--ataattataattaaattgattttgggaaacggggtgttaca 172  Q
    ||||||||||| |||||| |||  |||||||| ||  || ||||| ||| ||||||||||||||||||||||||||||    
T  19726081 tgtgacatgcccgtttggggttttactctgatattgaattattattatttaattgattttgggaaacggggtgttaca 19726004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 175
Target Start/End: Original strand, 24514582 - 24514612
Alignment:
Q  145 aattgattttgggaaacggggtgttacaatt 175  Q
    |||||||||||||||||||||||||||||||    
T  24514582 aattgattttgggaaacggggtgttacaatt 24514612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 172
Target Start/End: Original strand, 9100779 - 9100812
Alignment:
Q  139 taattaaattgattttgggaaacggggtgttaca 172  Q
    ||||||||||||||||||| ||||||||||||||    
T  9100779 taattaaattgattttggggaacggggtgttaca 9100812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 174
Target Start/End: Original strand, 14595420 - 14595449
Alignment:
Q  145 aattgattttgggaaacggggtgttacaat 174  Q
    ||||||||||||||||||||||||||||||    
T  14595420 aattgattttgggaaacggggtgttacaat 14595449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 149; Significance: 1e-78; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 12 - 172
Target Start/End: Complemental strand, 15797570 - 15797410
Alignment:
Q  12 gaagaatattccgctgcagtttaatgaagttttatgaaggatgttgttaaatagttttaatctatttaagaatttatgtttagtagtgtgacatgccgtt 111  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  15797570 gaagaatattccgctgcagtttaatgaagctttttgaaggatgttgttaaatagttttaatctatttaagaatttatgttcagtagtgtgacatgccgtt 15797471  T
Q  112 tggtgttgaactctgattttataattataattaaattgattttgggaaacggggtgttaca 172  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15797470 tggtgttgaactctgattttataattataattaaattgattttgggaaacggggtgttaca 15797410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 12 - 173
Target Start/End: Original strand, 636356 - 636518
Alignment:
Q  12 gaagaatattccgctgcagtttaatgaagttttatgaaggatgttgttaaatagttttaatc-tatttaagaatttatgtttagtagtgtgacatgccgt 110  Q
    ||||||||||||||||||  |||||||||||||||||| |||||| |||||||||||| ||| |||||||||| ||||||||||||||||||||||||||    
T  636356 gaagaatattccgctgcaaattaatgaagttttatgaaagatgttattaaatagtttttatcctatttaagaaattatgtttagtagtgtgacatgccgt 636455  T
Q  111 ttggtgttgaactctgattttataattataattaaattgattttgggaaacggggtgttacaa 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  636456 ttggtgttgaactctgattttataattataattaaattgattttgggaaacggggtgttacaa 636518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 39 - 172
Target Start/End: Original strand, 41800557 - 41800690
Alignment:
Q  39 agttttatgaaggatgttgttaaatagttttaatctatttaagaatttatgtttagtagtgtgacatgccgtttggtgttgaactctgattttataatta 138  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||   || ||||||||||||||||||||    
T  41800557 agtttaatgaaggatgttgttaaatagttttaatctatttaagaatttatattttgtagtgtgacatgccgtttaacgtggaactctgattttataatta 41800656  T
Q  139 taattaaattgattttgggaaacggggtgttaca 172  Q
    ||||||||||||||||||||||||||||||||||    
T  41800657 taattaaattgattttgggaaacggggtgttaca 41800690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 39 - 172
Target Start/End: Complemental strand, 42700797 - 42700664
Alignment:
Q  39 agttttatgaaggatgttgttaaatagttttaatctatttaagaatttatgtttagtagtgtgacatgccgtttggtgttgaactctgattttataatta 138  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||   || ||||||||||||||||||||    
T  42700797 agtttaatgaaggatgttgttaaatagttttaatctatttaagaatttatattttgtagtgtgacatgccgtttaacgtggaactctgattttataatta 42700698  T
Q  139 taattaaattgattttgggaaacggggtgttaca 172  Q
    ||||||||||||||||||||||||||||||||||    
T  42700697 taattaaattgattttgggaaacggggtgttaca 42700664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 39 - 175
Target Start/End: Original strand, 53749358 - 53749494
Alignment:
Q  39 agttttatgaaggatgttgttaaatagttttaatctatttaagaatttatgtttagtagtgtgacatgccgtttggtgttgaactctgattttataatta 138  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| | || ||| |||||||||||||||||||  ||| ||||||||||||||||||||    
T  53749358 agtttaatgaaggatgttgttaaatagttttaatctatttaagaaatcatattttgtagtgtgacatgccgtttaatgtggaactctgattttataatta 53749457  T
Q  139 taattaaattgattttgggaaacggggtgttacaatt 175  Q
    |||||||||||||||||||||||||||||||||||||    
T  53749458 taattaaattgattttgggaaacggggtgttacaatt 53749494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 39 - 175
Target Start/End: Original strand, 51602678 - 51602816
Alignment:
Q  39 agttttatgaaggatgttgttaaatagttttaatctatttaagaatttatgtttagtagtgtgacatgccgtttggtgttgaactctga-ttttataa-t 136  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||||  ||| ||||||||| |||||||| |    
T  51602678 agtttaatgaaggatgttgttaaatagttttaatctatttaagaatttatattttgaagtgtgacatgccgtttaatgtggaactctgatttttataatt 51602777  T
Q  137 tataattaaattgattttgggaaacggggtgttacaatt 175  Q
    |||||||||||||||||||||||||||||||||||||||    
T  51602778 tataattaaattgattttgggaaacggggtgttacaatt 51602816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 39 - 171
Target Start/End: Original strand, 51608559 - 51608693
Alignment:
Q  39 agttttatgaaggatgttgttaaatagttttaatctatttaagaatttatgtttagtagtgtgacatgccgtttggtgttgaactctga-ttttataa-t 136  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||||  ||| ||||||||| |||||||| |    
T  51608559 agtttaatgaaggatgttgttaaatagttttaatctatttaagaatttatattttgaagtgtgacatgccgtttaatgtggaactctgatttttataatt 51608658  T
Q  137 tataattaaattgattttgggaaacggggtgttac 171  Q
    |||||||||||||||||||||||||||||||||||    
T  51608659 tataattaaattgattttgggaaacggggtgttac 51608693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 7 - 172
Target Start/End: Original strand, 14508510 - 14508678
Alignment:
Q  7 atgtcgaagaatattccgctgcagtttaatgaagttttatgaaggatgttg-ttaaatagttt-taatctatttaagaatttatgtttagtagtgtgaca 104  Q
    |||| ||||||||||||||||||  |||||||||||||| ||||||||||  ||||||||||| || |||||||||| | || ||   ||| ||||||||    
T  14508510 atgttgaagaatattccgctgcaaattaatgaagttttaggaaggatgtttattaaatagtttatattctatttaaggaattttgaaaagttgtgtgaca 14508609  T
Q  105 tgccgttt-ggtgttgaactctgattttataattataattaaattgattttgggaaacggggtgttaca 172  Q
    |||||||| |||| | ||||||||| ||||| |||| |||||| |||||||||||||||||||||||||    
T  14508610 tgccgttttggtgataaactctgatattatatttattattaaagtgattttgggaaacggggtgttaca 14508678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 14 - 172
Target Start/End: Complemental strand, 20939840 - 20939681
Alignment:
Q  14 agaatattccgctgcagtttaatgaagttttatgaaggatgttg-ttaaatagttt-taatctatttaagaatttatgtttagtagtgtgacatgccgtt 111  Q
    ||||||||||||||||  |||||||||||| ||||||||||||  ||||||||||| || ||||||    |||||  |   ||| |||||||||||||||    
T  20939840 agaatattccgctgcaaattaatgaagttt-atgaaggatgtttattaaatagtttatattctattatgaaattttggaaaagttgtgtgacatgccgtt 20939742  T
Q  112 tggtgttgaactctgattttataattataattaaattgattttgggaaacggggtgttaca 172  Q
    ||||| | ||||||||| ||||| |||  | |||| |||||||||||||||||||||||||    
T  20939741 tggtgataaactctgatattatatttagtaataaagtgattttgggaaacggggtgttaca 20939681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 16 - 172
Target Start/End: Complemental strand, 30237291 - 30237130
Alignment:
Q  16 aatattccgctgcagtttaatgaagttttatgaaggatg-ttgttaaatagttt--taatctatttaagaatttatgtttagtagtgtgacatgcc--gt 110  Q
    ||||||||||||||  ||| ||| ||||||||||||||| || |||||||||||  || |||||||||||| || ||   ||||||||||||||||   |    
T  30237291 aatattccgctgcaaattattgatgttttatgaaggatgtttattaaatagttttatattctatttaagaaattttgaaaagtagtgtgacatgcccgtt 30237192  T
Q  111 ttggtgttgaactctgattttataattataattaaattgattttgggaaacggggtgttaca 172  Q
    |||||||| ||||||||| ||||| ||||  || ||||| ||| ||  ||||||||||||||    
T  30237191 ttggtgttaaactctgatgttatatttattgtttaattgctttgggataacggggtgttaca 30237130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 175
Target Start/End: Original strand, 14992252 - 14992420
Alignment:
Q  12 gaagaatattccgctgcagtttaatgaagttttatgaaggatgttg-ttaaatagttttaa--tctatttaagaatttatgtttagtagtgtgacatgcc 108  Q
    ||||||||||||||||||  ||| ||| |||||||||| || |||  |||||||||||||   |||||||||||| || ||   ||||||||||||||||    
T  14992252 gaagaatattccgctgcaaattattgatgttttatgaaagacgtttattaaatagttttatattctatttaagaaattttgaaaagtagtgtgacatgcc 14992351  T
Q  109 g--tttggtgttgaactctgattttataattataattaaattgattttgggaaacggggtgttacaatt 175  Q
       ||||||||| |||||| || ||||| |||| ||| ||||| ||| ||  |||||||||||||||||    
T  14992352 cgttttggtgttaaactcttatgttatatttattatttaattgctttgggataacggggtgttacaatt 14992420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 172
Target Start/End: Complemental strand, 13443750 - 13443589
Alignment:
Q  16 aatattccgctgcagtttaatgaagttttatgaaggatgttg-ttaaatagttttaa--tctatttaagaatttatgtttagtagtgtgacatgccg--t 110  Q
    ||||||||||||||  ||| ||| ||||||| |||||||||  |||||||||||||   ||||||||| || || ||   ||||||||||||||||   |    
T  13443750 aatattccgctgcaaattattgatgttttataaaggatgtttattaaatagttttatattctatttaaaaaattttgaaaagtagtgtgacatgcccgtt 13443651  T
Q  111 ttggtgttgaactctgattttataattataattaaattgattttgggaaacggggtgttaca 172  Q
    |||| ||| ||||||||| ||||| |||| ||| ||||| ||| ||  ||||||||||||||    
T  13443650 ttggagttaaactctgatgttatatttattatttaattgctttgggataacggggtgttaca 13443589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 173
Target Start/End: Complemental strand, 14479907 - 14479863
Alignment:
Q  129 tttataattataattaaattgattttgggaaacggggtgttacaa 173  Q
    ||||||||||| ||| ||||||||||||| |||||||||||||||    
T  14479907 tttataattatcatttaattgattttgggcaacggggtgttacaa 14479863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 174
Target Start/End: Complemental strand, 16220668 - 16220630
Alignment:
Q  136 ttataattaaattgattttgggaaacggggtgttacaat 174  Q
    |||| ||||||||||||||||| ||||||||||||||||    
T  16220668 ttattattaaattgattttgggtaacggggtgttacaat 16220630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 173
Target Start/End: Complemental strand, 16750308 - 16750270
Alignment:
Q  135 attataattaaattgattttgggaaacggggtgttacaa 173  Q
    ||||| ||| |||||||||||||||||||||||||||||    
T  16750308 attattatttaattgattttgggaaacggggtgttacaa 16750270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 173
Target Start/End: Complemental strand, 23121031 - 23120993
Alignment:
Q  135 attataattaaattgattttgggaaacggggtgttacaa 173  Q
    ||||| ||| |||||||||||||||||||||||||||||    
T  23121031 attattatttaattgattttgggaaacggggtgttacaa 23120993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 172
Target Start/End: Original strand, 11171989 - 11172026
Alignment:
Q  135 attataattaaattgattttgggaaacggggtgttaca 172  Q
    ||||| ||| ||||||||||||||||||||||||||||    
T  11171989 attattatttaattgattttgggaaacggggtgttaca 11172026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 134
Target Start/End: Original strand, 15005599 - 15005726
Alignment:
Q  12 gaagaatattccgctgcagtttaatgaagttttatgaaggatg-ttgttaaatagttt--taatctatttaagaatttatgtttagtagtgtgacatgcc 108  Q
    ||||||||||||||||||  ||| |||  ||||||||| || | || |||||||||||  || |||||||||||| || ||   ||||||||||||||||    
T  15005599 gaagaatattccgctgcaaattattgatattttatgaaagacgtttattaaatagttttatattctatttaagaaattttgaaaagtagtgtgacatgcc 15005698  T
Q  109 --gtttggtgttgaactctgattttata 134  Q
       ||||||||| ||||||||| |||||    
T  15005699 cgttttggtgttaaactctgatgttata 15005726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 173
Target Start/End: Original strand, 17000911 - 17000948
Alignment:
Q  136 ttataattaaattgattttgggaaacggggtgttacaa 173  Q
    |||| ||| |||||||||||||||||||||||||||||    
T  17000911 ttattatttaattgattttgggaaacggggtgttacaa 17000948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 172
Target Start/End: Complemental strand, 14062349 - 14062313
Alignment:
Q  136 ttataattaaattgattttgggaaacggggtgttaca 172  Q
    |||| ||||||||||||||||| ||||||||||||||    
T  14062349 ttattattaaattgattttgggtaacggggtgttaca 14062313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 172
Target Start/End: Original strand, 15154090 - 15154126
Alignment:
Q  136 ttataattaaattgattttgggaaacggggtgttaca 172  Q
    |||| ||||||||||||||||| ||||||||||||||    
T  15154090 ttattattaaattgattttgggtaacggggtgttaca 15154126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 209
Target Start/End: Complemental strand, 17480971 - 17480931
Alignment:
Q  170 acaattttggcatttt-gtcagttgagatagaacttgtgga 209  Q
    |||||||||||||||| |||||||||| |||||||||||||    
T  17480971 acaattttggcatttttgtcagttgagctagaacttgtgga 17480931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 134 - 174
Target Start/End: Original strand, 23725547 - 23725587
Alignment:
Q  134 aattataattaaattgattttgggaaacggggtgttacaat 174  Q
    |||||| ||| ||||||||| ||||||||||||||||||||    
T  23725547 aattattatttaattgatttggggaaacggggtgttacaat 23725587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 148; Significance: 5e-78; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 12 - 175
Target Start/End: Original strand, 23202094 - 23202257
Alignment:
Q  12 gaagaatattccgctgcagtttaatgaagttttatgaaggatgttgttaaatagttttaatctatttaagaatttatgtttagtagtgtgacatgccgtt 111  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  23202094 gaagaatattccgctgcagtttaatgaagttttatgttggatgttgttaaatagttttaatctatttaagaatttacgtttagtagtgtgacatgccgtt 23202193  T
Q  112 tggtgttgaactctgattttataattataattaaattgattttgggaaacggggtgttacaatt 175  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  23202194 tggtgttgaactctgattttataattataattaaattgaatttgggaaacggggtgttacaatt 23202257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 12 - 175
Target Start/End: Original strand, 23508221 - 23508384
Alignment:
Q  12 gaagaatattccgctgcagtttaatgaagttttatgaaggatgttgttaaatagttttaatctatttaagaatttatgtttagtagtgtgacatgccgtt 111  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  23508221 gaagaatattccgctgcagtttaatgaagttttatgttggatgttgttaaatagttttaatctatttaagaatttacgtttagtagtgtgacatgccgtt 23508320  T
Q  112 tggtgttgaactctgattttataattataattaaattgattttgggaaacggggtgttacaatt 175  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  23508321 tggtgttgaactctgattttataattataattaaattgaatttgggaaacggggtgttacaatt 23508384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 39 - 172
Target Start/End: Original strand, 11632546 - 11632679
Alignment:
Q  39 agttttatgaaggatgttgttaaatagttttaatctatttaagaatttatgtttagtagtgtgacatgccgtttggtgttgaactctgattttataatta 138  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||   || ||||||||||||||||||||    
T  11632546 agtttaatgaaggatgttgttaaatagttttaatctatttaagaatttatattttgtagtgtgacatgccgtttaaggtggaactctgattttataatta 11632645  T
Q  139 taattaaattgattttgggaaacggggtgttaca 172  Q
    ||||||||||||||||||||||||||||||||||    
T  11632646 taattaaattgattttgggaaacggggtgttaca 11632679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 39 - 173
Target Start/End: Original strand, 807603 - 807738
Alignment:
Q  39 agttttatgaaggatgttgttaaatagttttaatctatttaagaatt-tatgtttagtagtgtgacatgccgtttggtgttgaactctgattttataatt 137  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||  ||| |||||||||||||||||||    
T  807603 agtttaatgaaggatgttgttaaatagttttaatctatttaagaattatatattttgtagtgtgacatgccgtttaatgtggaactctgattttataatt 807702  T
Q  138 ataattaaattgattttgggaaacggggtgttacaa 173  Q
    ||||||||||||||||||||||||||||||||||||    
T  807703 ataattaaattgattttgggaaacggggtgttacaa 807738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 39 - 172
Target Start/End: Original strand, 20580548 - 20580681
Alignment:
Q  39 agttttatgaaggatgttgttaaatagttttaatctatttaagaatttatgtttagtagtgtgacatgccgtttggtgttgaactctgattttataatta 138  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||||||||||  ||| ||||||||||| ||||||||    
T  20580548 agtttaatgaaggatgttgttaaatagttttaatctatttaagagtttatattttgtagtgtgacatgccgtttaatgtggaactctgattctataatta 20580647  T
Q  139 taattaaattgattttgggaaacggggtgttaca 172  Q
    ||||||||||||||||||||||||||||||||||    
T  20580648 taattaaattgattttgggaaacggggtgttaca 20580681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 39 - 175
Target Start/End: Complemental strand, 23073783 - 23073646
Alignment:
Q  39 agttttatgaaggatgttgttaaatagttttaatctatttaagaatttatgtttagtagtgtgacatgccgtttggtgttgaactctgattttataa-tt 137  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||  ||| ||||||||||||||||| ||    
T  23073783 agtttaatgaaggatgttgttaaatagttttaatctatttaagaatttatattttgtagtgtgtcatgccgtttaatgtggaactctgattttataattt 23073684  T
Q  138 ataattaaattgattttgggaaacggggtgttacaatt 175  Q
    ||||||||||||||||||||||||||||||||||||||    
T  23073683 ataattaaattgattttgggaaacggggtgttacaatt 23073646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 39 - 172
Target Start/End: Original strand, 18056316 - 18056449
Alignment:
Q  39 agttttatgaaggatgttgttaaatagttttaatctatttaagaatttatgtttagtagtgtgacatgccgtttggtgttgaactctgattttataatta 138  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||   || ||||||||||||||||||||    
T  18056316 agtttaatgaaggatgttgttaaatagttttaatctatttaagaatttatattt-gtagtgtgacatgccgtttaacgtggaactctgattttataatta 18056414  T
Q  139 taattaaattga-ttttgggaaacggggtgttaca 172  Q
    |||||||||||| ||||||||||||||||||||||    
T  18056415 taattaaattgatttttgggaaacggggtgttaca 18056449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 39 - 175
Target Start/End: Original strand, 18049837 - 18049972
Alignment:
Q  39 agttttatgaaggatgttgttaaatagttttaatctatttaagaatttatgtttagtagtgtgacatgccgtttggtgttgaactctgattttataatta 138  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||   || ||||||||||||||||||||    
T  18049837 agtttaatgaaggat-ttgttaaatagttttaatctatttaagaatttatattt-gtagtgtgacatgccgtttaacgtggaactctgattttataatta 18049934  T
Q  139 taattaaattga-ttttgggaaacggggtgttacaatt 175  Q
    |||||||||||| |||||||||||||||||||||||||    
T  18049935 taattaaattgatttttgggaaacggggtgttacaatt 18049972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 32 - 175
Target Start/End: Complemental strand, 14146035 - 14145889
Alignment:
Q  32 ttaatgaagttttatgaaggatgttg-ttaaatagttttaa--tctatttaagaatttatgtttagtagtgtgacatgccgtttggtgttgaactctgat 128  Q
    ||||||||| |||||||||||||||  |||||||||||||   |||||||| ||| || ||   || ||||||||||||||||||||| | |||||| ||    
T  14146035 ttaatgaagctttatgaaggatgtttattaaatagttttatattctatttatgaaattttgaaaagaagtgtgacatgccgtttggtgataaactctaat 14145936  T
Q  129 tttataattataattaaattgattttgggaaacggggtgttacaatt 175  Q
     ||||| |||| ||| |||||||||||||||||||||||||||||||    
T  14145935 gttatatttattatttaattgattttgggaaacggggtgttacaatt 14145889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 12 - 172
Target Start/End: Complemental strand, 14431567 - 14431404
Alignment:
Q  12 gaagaatattccgctgcagtttaatgaagttttatgaaggatgttg-ttaaatagttttaa--tctatttaagaatttatgtttagtagtgtgacatgcc 108  Q
    ||||||| ||| ||||||  ||||||||| |||||||||||||||  |||||||||||||   |||||||| ||| || ||   || ||||||||||| |    
T  14431567 gaagaattttctgctgcaaattaatgaagctttatgaaggatgtttattaaatagttttatattctatttatgaaattttgaaaagaagtgtgacatgtc 14431468  T
Q  109 gtttggtgttgaactctgattttataattataattaaattgattttgggaaacggggtgttaca 172  Q
    |||||||| | ||||||||| ||||| |||| ||| ||||||||||| ||||||||||||||||    
T  14431467 gtttggtgataaactctgatgttatatttattatttaattgattttgagaaacggggtgttaca 14431404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 12 - 173
Target Start/End: Original strand, 14583277 - 14583443
Alignment:
Q  12 gaagaatattccgctgcagtttaatgaagttttatgaaggatgttg-ttaaatagttttaa--tctatttaagaatttatgtttagtagtgtgacatgcc 108  Q
    ||||||||||||||||||  ||| ||| |||||||||| ||||||  |||||||||||||   |||||||||||| || |    |||| |||||||||||    
T  14583277 gaagaatattccgctgcaaattattgatgttttatgaaagatgtttattaaatagttttatattctatttaagaaattttaacaagtattgtgacatgcc 14583376  T
Q  109 g--tttggtgttgaactctgattttataattataattaaattgattttgggaaacggggtgttacaa 173  Q
       ||||||||| ||||||||| ||||| |||| ||| ||||| ||| ||  |||||||||||||||    
T  14583377 cgttttggtgttaaactctgatgttatatttattatttaattgctttgggataacggggtgttacaa 14583443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 94 - 173
Target Start/End: Complemental strand, 15338316 - 15338235
Alignment:
Q  94 gtagtgtgacatgccgtttggtgttgaactctgatttt--ataattataattaaattgattttgggaaacggggtgttacaa 173  Q
    |||||||||||||||  |||| |||  |||||||| ||  | |||||| ||| |||||||||||||||||||||||||||||    
T  15338316 gtagtgtgacatgcccgttggggttttactctgatgttgaaaaattattatttaattgattttgggaaacggggtgttacaa 15338235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 145 - 178
Target Start/End: Original strand, 10308747 - 10308780
Alignment:
Q  145 aattgattttgggaaacggggtgttacaattttg 178  Q
    ||||||||||||||||||||||||||||||||||    
T  10308747 aattgattttgggaaacggggtgttacaattttg 10308780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 172
Target Start/End: Original strand, 35963481 - 35963517
Alignment:
Q  136 ttataattaaattgattttgggaaacggggtgttaca 172  Q
    |||||||| ||||||||||||||||||||||||||||    
T  35963481 ttataatttaattgattttgggaaacggggtgttaca 35963517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 173
Target Start/End: Original strand, 15723903 - 15723984
Alignment:
Q  94 gtagtgtgacatgccgtttggtgttgaactctgatttt--ataattataattaaattgattttgggaaacggggtgttacaa 173  Q
    |||||||||||||||  |||| |||  |||||||| ||  | |||||| ||| |||||||||||||||||| ||||||||||    
T  15723903 gtagtgtgacatgcccgttggggttttactctgatgttgaaaaattattatttaattgattttgggaaacgtggtgttacaa 15723984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 172
Target Start/End: Complemental strand, 1612054 - 1612017
Alignment:
Q  135 attataattaaattgattttgggaaacggggtgttaca 172  Q
    ||||| ||| ||||||||||||||||||||||||||||    
T  1612054 attattatttaattgattttgggaaacggggtgttaca 1612017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 172
Target Start/End: Original strand, 14321332 - 14321369
Alignment:
Q  135 attataattaaattgattttgggaaacggggtgttaca 172  Q
    ||||| ||| ||||||||||||||||||||||||||||    
T  14321332 attattatttaattgattttgggaaacggggtgttaca 14321369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 174
Target Start/End: Complemental strand, 38827118 - 38827089
Alignment:
Q  145 aattgattttgggaaacggggtgttacaat 174  Q
    ||||||||||||||||||||||||||||||    
T  38827118 aattgattttgggaaacggggtgttacaat 38827089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 173
Target Start/End: Original strand, 11395449 - 11395477
Alignment:
Q  145 aattgattttgggaaacggggtgttacaa 173  Q
    |||||||||||||||||||||||||||||    
T  11395449 aattgattttgggaaacggggtgttacaa 11395477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 173
Target Start/End: Complemental strand, 16089418 - 16089390
Alignment:
Q  145 aattgattttgggaaacggggtgttacaa 173  Q
    |||||||||||||||||||||||||||||    
T  16089418 aattgattttgggaaacggggtgttacaa 16089390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 66 - 174
Target Start/End: Complemental strand, 19145045 - 19144938
Alignment:
Q  66 ttttaatctatttaagaatttatgtttagtagtgtgacatgccgtttggtgttgaactctgattttataattataattaaattgattttgggaaacgggg 165  Q
    ||||| |||||||||||| || ||   ||||||||| ||||||  ||| |||||||||||||| || || |||| ||| ||||| ||| ||  |||||||    
T  19145045 ttttattctatttaagaaattttgaaaagtagtgtggcatgcccgttgttgttgaactctgatattttatttattatttaattg-tttgggttaacgggg 19144947  T
Q  166 tgttacaat 174  Q
    |||||||||    
T  19144946 tgttacaat 19144938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 66 - 174
Target Start/End: Complemental strand, 20744444 - 20744337
Alignment:
Q  66 ttttaatctatttaagaatttatgtttagtagtgtgacatgccgtttggtgttgaactctgattttataattataattaaattgattttgggaaacgggg 165  Q
    ||||| |||||||||||| || ||   ||||||||| ||||||  ||| |||||||||||||| || || |||| ||| ||||| ||| ||  |||||||    
T  20744444 ttttattctatttaagaaattttgaaaagtagtgtggcatgcccgttgttgttgaactctgatattttatttattatttaattg-tttgggttaacgggg 20744346  T
Q  166 tgttacaat 174  Q
    |||||||||    
T  20744345 tgttacaat 20744337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0596 (Bit Score: 143; Significance: 5e-75; HSPs: 1)
Name: scaffold0596
Description:

Target: scaffold0596; HSP #1
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 12 - 173
Target Start/End: Original strand, 131 - 292
Alignment:
Q  12 gaagaatattccgctgcagtttaatgaagttttatgaaggatgttgttaaatagtttt-aatctatttaagaatttatgtttagtagtgtgacatgccgt 110  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  131 gaagaatattccgctgcagtttaatgaagtttt-tgaaggatgttgttaaatagtttttaatctatttaagaatttatgtttagtagtgtgacatgccgt 229  T
Q  111 ttggtgttgaactctgattttataattataattaaattgattttgggaaacggggtgttacaa 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  230 ttggtgttgaactctgattttataattataattaaattgattttgggaaacgggatgttacaa 292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 138; Significance: 5e-72; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 12 - 172
Target Start/End: Complemental strand, 22174709 - 22174549
Alignment:
Q  12 gaagaatattccgctgcagtttaatgaagttttatgaaggatgttgttaaatagtttt-aatctatttaagaatttatgtttagtagtgtgacatgccgt 110  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  22174709 gaagaatattccgctgcagtttaatgaagctttttgaaggatgttgttaaatagtttttaatctatttaagaatttatgtttagtagtgtgacatgccgt 22174610  T
Q  111 ttggtgttgaactctgattttataattataattaaattgattttgggaaacggggtgttaca 172  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22174609 t-ggtgttgaactctgattttataattataattaaattgattttgggaaacggggtgttaca 22174549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 12 - 175
Target Start/End: Original strand, 17265386 - 17265549
Alignment:
Q  12 gaagaatattccgctgcagtttaatgaagttttatgaaggatgttgttaaatagttttaatctatttaagaatttatgtttagtagtgtgacatgccgtt 111  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||||| || ||| |||| |||||||||||||||    
T  17265386 gaagaatattccgctgcaatttaatgaagttttatgaaagatgttgttaaatagttttattctatttaagaaattttgtatagtggtgtgacatgccgtt 17265485  T
Q  112 tggtgttgaactctgattttataattataattaaattgattttgggaaacggggtgttacaatt 175  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17265486 tggtgttgaactctgattttataattataattaaattgattttgggaaacggggtgttacaatt 17265549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 12 - 173
Target Start/End: Original strand, 17271868 - 17272029
Alignment:
Q  12 gaagaatattccgctgcagtttaatgaagttttatgaaggatgttgttaaatagttttaatctatttaagaatttatgtttagtagtgtgacatgccgtt 111  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||||| || ||| |||| |||||||||||||||    
T  17271868 gaagaatattccgctgcaatttaatgaagttttatgaaagatgttgttaaatagttttattctatttaagaaattttgtatagtggtgtgacatgccgtt 17271967  T
Q  112 tggtgttgaactctgattttataattataattaaattgattttgggaaacggggtgttacaa 173  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  17271968 tggtgttgaactttgattttataattataattaaattgattttgggaaacggggtgttacaa 17272029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 39 - 173
Target Start/End: Original strand, 21678871 - 21679005
Alignment:
Q  39 agttttatgaaggatgttgttaaatagttttaatctatttaagaatttatgtttagtagtgtgacatgccgtttggtgttgaactctgattttataatta 138  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||  ||| ||||||||||||||||| ||    
T  21678871 agtttaatgaaggatgttgttaaatagttttaatctatttaagaatttatattttgtagtgtgacatgccgtttaatgtggaactctgattttataacta 21678970  T
Q  139 taattaaattgattttgggaaacggggtgttacaa 173  Q
    |||||||||||||||||||||||||||||||||||    
T  21678971 taattaaattgattttgggaaacggggtgttacaa 21679005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 12 - 171
Target Start/End: Original strand, 15194663 - 15194827
Alignment:
Q  12 gaagaatattccgctgcagtttaatgaagttttatgaaggatgt-tgttaaatagttt--taatctatttaagaatttatgtttagtagtgtgacatg-c 107  Q
    ||||||||||||||||||  ||| ||| |||||||||||||||| | || ||||||||  || | |||||||||| || ||   |||||||||||||| |    
T  15194663 gaagaatattccgctgcaaattattgatgttttatgaaggatgtgtattcaatagttttatattatatttaagaaattttgaaaagtagtgtgacatgcc 15194762  T
Q  108 cgttt-ggtgttgaactctgattttataattataattaaattgattttggga-aacggggtgttac 171  Q
    ||||| ||| || ||||||||| ||||| |||| ||| ||||| |||||||| |||||||||||||    
T  15194763 cgtttcggtattaaactctgatgttatatttattatttaattg-ttttgggataacggggtgttac 15194827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 173
Target Start/End: Original strand, 24931635 - 24931669
Alignment:
Q  139 taattaaattgattttgggaaacggggtgttacaa 173  Q
    |||||||||||||||||||||||||||||||||||    
T  24931635 taattaaattgattttgggaaacggggtgttacaa 24931669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 94 - 172
Target Start/End: Original strand, 22509854 - 22509934
Alignment:
Q  94 gtagtgtgacatgccgtttggtgttgaactctgatttt--ataattataattaaattgattttgggaaacggggtgttaca 172  Q
    |||||||||||||||  |||| |||  |||||||| ||  | |||||| ||| ||||||||||||||||||||||||||||    
T  22509854 gtagtgtgacatgcccgttggggttttactctgatgttgaaaaattattatttaattgattttgggaaacggggtgttaca 22509934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 173
Target Start/End: Original strand, 6728995 - 6729035
Alignment:
Q  133 taattataattaaattgattttgggaaacggggtgttacaa 173  Q
    ||||||| ||||||||||||||||| |||||||||||||||    
T  6728995 taattattattaaattgattttgggtaacggggtgttacaa 6729035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 172
Target Start/End: Original strand, 22759946 - 22759982
Alignment:
Q  136 ttataattaaattgattttgggaaacggggtgttaca 172  Q
    |||| ||||||||||||||||||||||||||||||||    
T  22759946 ttattattaaattgattttgggaaacggggtgttaca 22759982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 174
Target Start/End: Original strand, 758993 - 759031
Alignment:
Q  136 ttataattaaattgattttgggaaacggggtgttacaat 174  Q
    |||| |||||||||||||||| |||||||||||||||||    
T  758993 ttattattaaattgattttggaaaacggggtgttacaat 759031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 172
Target Start/End: Original strand, 21905999 - 21906078
Alignment:
Q  93 agtagtgtgacatgcc-gtttggtgttgaactctgattttataattataattaaattgattttggga-aacggggtgttaca 172  Q
    |||||||||||||||| |||||||||| |||||||||||  || |||| ||| |||||  ||||||| ||||||||||||||    
T  21905999 agtagtgtgacatgcctgtttggtgttaaactctgatttattatttattatttaattg--tttgggataacggggtgttaca 21906078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 175
Target Start/End: Complemental strand, 22466124 - 22466094
Alignment:
Q  145 aattgattttgggaaacggggtgttacaatt 175  Q
    |||||||||||||||||||||||||||||||    
T  22466124 aattgattttgggaaacggggtgttacaatt 22466094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 172
Target Start/End: Original strand, 30344891 - 30344929
Alignment:
Q  134 aattataattaaattgattttgggaaacggggtgttaca 172  Q
    |||||| ||| ||||||||||||||||||||||||||||    
T  30344891 aattattatttaattgattttgggaaacggggtgttaca 30344929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 173
Target Start/End: Complemental strand, 34828437 - 34828399
Alignment:
Q  135 attataattaaattgattttgggaaacggggtgttacaa 173  Q
    ||||| ||| |||||||||||||||||||||||||||||    
T  34828437 attattatttaattgattttgggaaacggggtgttacaa 34828399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 130; Significance: 3e-67; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 12 - 172
Target Start/End: Complemental strand, 29878 - 29718
Alignment:
Q  12 gaagaatattccgctgcagtttaatgaagttttatgaaggatgttgttaaatagtttt-aatctatttaagaatttatgtttagtagtgtgacatgccgt 110  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  29878 gaagaatattccgctgcagtttaatgaagctttttgaaggatgttgttaaatggtttttaatctatttaagaatttatgtttagtagtgtgacatgccgt 29779  T
Q  111 ttggtgttgaactctgattttataattataattaaattgattttgggaaacggggtgttaca 172  Q
    | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  29778 t-ggtgttgaactctgattttataattataattaaattgattttggaaaacggggtgttaca 29718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 130; Significance: 3e-67; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 12 - 172
Target Start/End: Original strand, 347 - 508
Alignment:
Q  12 gaagaatattccgctgcagtttaatgaagttttatgaaggatgtt-gttaaatagttttaatctatttaagaatttatgtttagtagtgtgacatgccgt 110  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  347 gaagaatattccgctgcagtttaattaagttttatgaaggatgtttgttaaatagttttaatctatttaagaatttttatttagtagtgtgacatgccgt 446  T
Q  111 ttggtgttgaactctgattttataattataattaaattgattttgggaaacggggtgttaca 172  Q
    ||| ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  447 ttgatgttgaactctgattttataaatataattaaattgaatttgggaaacggggtgttaca 508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 122; Significance: 2e-62; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 12 - 173
Target Start/End: Original strand, 27296596 - 27296757
Alignment:
Q  12 gaagaatattccgctgcagtttaatgaagttttatgaaggatgttgttaaatagttttaatctatttaagaatttatgtttagtagtgtgacatgccgtt 111  Q
    ||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||  ||||||||||| || ||| |||| |||||||||||||||    
T  27296596 gaagaatattccgctgcaaattaatgaagttttatgaaagatgttgttaaatagttttatcctatttaagaaattttgtatagtggtgtgacatgccgtt 27296695  T
Q  112 tggtgttgaactctgattttataattataattaaattgattttgggaaacggggtgttacaa 173  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  27296696 tggtgttgaactctgatattataattataattaaattgattttgggaaacggggtgttacaa 27296757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 39 - 175
Target Start/End: Complemental strand, 12571882 - 12571746
Alignment:
Q  39 agttttatgaaggatgttgttaaatagttttaatctatttaagaatttatgtttagtagtgtgacatgccgtttggtgttgaactctgattttataatta 138  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||  ||| ||||||||||||||||||||    
T  12571882 agtttaatgaaggatgttgttaaatagttttaatctatttaagaatttatattttgtagtgtgacatgccgtttaatgtggaactctgattttataatta 12571783  T
Q  139 taattaaattgattttgggaaacggggtgttacaatt 175  Q
    |||||||||||||||||||||||||||||||||||||    
T  12571782 taattaaattgattttgggaaacggggtgttacaatt 12571746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 39 - 175
Target Start/End: Complemental strand, 12578364 - 12578228
Alignment:
Q  39 agttttatgaaggatgttgttaaatagttttaatctatttaagaatttatgtttagtagtgtgacatgccgtttggtgttgaactctgattttataatta 138  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||  ||| ||||||||||||||||||||    
T  12578364 agtttaatgaaggatgttgttaaatagttttaatctatttaagaatttatattttgtagtgtgacatgccgtttaatgtggaactctgattttataatta 12578265  T
Q  139 taattaaattgattttgggaaacggggtgttacaatt 175  Q
    |||||||||||||||||||||||||||||||||||||    
T  12578264 taattaaattgattttgggaaacggggtgttacaatt 12578228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 39 - 175
Target Start/End: Complemental strand, 27790487 - 27790343
Alignment:
Q  39 agttttatgaaggatgttgttaaatagttttaatctatttaagaatttatgtttagtagtgtgacatgccgtttggtgttgaactctgattttataa--- 135  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||  ||| |||||||||||||||||       
T  27790487 agtttaatgaaggatgttgttaaatagttttaatctatttaagaatttatattttgtagtgtgacatgccgtttaatgtggaactctgattttataattt 27790388  T
Q  136 -----ttataattaaattgattttgggaaacggggtgttacaatt 175  Q
         ||||||||||||||||||||||||||||||||||||||||    
T  27790387 ataatttataattaaattgattttgggaaacggggtgttacaatt 27790343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 39 - 172
Target Start/End: Complemental strand, 27785266 - 27785125
Alignment:
Q  39 agttttatgaaggatgttgttaaatagttttaatctatttaagaatttatgtttagtagtgtgacatgccgtttggtgttgaactctgattttataa--- 135  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||  ||| |||||||||||||||||       
T  27785266 agtttaatgaaggatgttgttaaatagttttaatctatttaagaatttatattttgtagtgtgacatgccgtttaatgtggaactctgattttataattt 27785167  T
Q  136 -----ttataattaaattgattttgggaaacggggtgttaca 172  Q
         |||||||||||||||||||||||||||||||||||||    
T  27785166 ataatttataattaaattgattttgggaaacggggtgttaca 27785125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 26883563 - 26883518
Alignment:
Q  135 attataattaaattgattttgggaaacggggtgttacaattttggc 180  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||    
T  26883563 attatcatttaattgattttgggaaacggggtgttacaattttggc 26883518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 136 - 175
Target Start/End: Complemental strand, 23296947 - 23296908
Alignment:
Q  136 ttataattaaattgattttgggaaacggggtgttacaatt 175  Q
    |||| ||||||||||||||||| |||||||||||||||||    
T  23296947 ttattattaaattgattttgggtaacggggtgttacaatt 23296908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 170 - 209
Target Start/End: Original strand, 31525041 - 31525080
Alignment:
Q  170 acaattttggcattttgtcagttgagatagaacttgtgga 209  Q
    ||||||| |||||||||||||||||| |||||||||||||    
T  31525041 acaatttcggcattttgtcagttgagctagaacttgtgga 31525080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 173
Target Start/End: Complemental strand, 8919 - 8891
Alignment:
Q  145 aattgattttgggaaacggggtgttacaa 173  Q
    |||||||||||||||||||||||||||||    
T  8919 aattgattttgggaaacggggtgttacaa 8891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 173
Target Start/End: Complemental strand, 8688195 - 8688167
Alignment:
Q  145 aattgattttgggaaacggggtgttacaa 173  Q
    |||||||||||||||||||||||||||||    
T  8688195 aattgattttgggaaacggggtgttacaa 8688167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 172
Target Start/End: Original strand, 19792020 - 19792056
Alignment:
Q  136 ttataattaaattgattttgggaaacggggtgttaca 172  Q
    |||| ||||||||||||||||| ||||||||||||||    
T  19792020 ttattattaaattgattttgggtaacggggtgttaca 19792056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 172
Target Start/End: Complemental strand, 24942831 - 24942795
Alignment:
Q  136 ttataattaaattgattttgggaaacggggtgttaca 172  Q
    |||| ||||||||||||||||| ||||||||||||||    
T  24942831 ttattattaaattgattttgggtaacggggtgttaca 24942795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 172
Target Start/End: Original strand, 25036836 - 25036872
Alignment:
Q  136 ttataattaaattgattttgggaaacggggtgttaca 172  Q
    |||| |||||||||||||||||||||||||| |||||    
T  25036836 ttattattaaattgattttgggaaacggggtattaca 25036872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 172
Target Start/End: Original strand, 25040943 - 25040979
Alignment:
Q  136 ttataattaaattgattttgggaaacggggtgttaca 172  Q
    |||| |||||||||||||||||||||||||| |||||    
T  25040943 ttattattaaattgattttgggaaacggggtattaca 25040979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 173
Target Start/End: Complemental strand, 29280338 - 29280310
Alignment:
Q  145 aattgattttgggaaacggggtgttacaa 173  Q
    |||||||||||||||||||||||||||||    
T  29280338 aattgattttgggaaacggggtgttacaa 29280310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 119; Significance: 1e-60; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 39 - 173
Target Start/End: Original strand, 1805099 - 1805233
Alignment:
Q  39 agttttatgaaggatgttgttaaatagttttaatctatttaagaatttatgtttagtagtgtgacatgccgtttggtgttgaactctgattttataatta 138  Q
    ||||| ||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1805099 agtttaatgaatgattttgttaaataattttaatctatttaagaatttatgtttagtagtgtgacatgccgtttggtgttgaactctgattttataatta 1805198  T
Q  139 taattaaattgattttgggaaacggggtgttacaa 173  Q
    |||||||||||||||||||||||||||||||||||    
T  1805199 taattaaattgattttgggaaacggggtgttacaa 1805233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 12 - 172
Target Start/End: Original strand, 9273775 - 9273936
Alignment:
Q  12 gaagaatattccgctgcagtttaatgaagttttatgaaggatgttgttaaatagttttaatctatttaagaa-tttatgtttagtagtgtgacatgccgt 110  Q
    ||||||||||||||||||  |||||| ||||||||||| |||| |||||||||||||||  ||||||||||| |||||||||||||||||||||||||||    
T  9273775 gaagaatattccgctgcaaattaatggagttttatgaaagatgatgttaaatagttttatcctatttaagaaatttatgtttagtagtgtgacatgccgt 9273874  T
Q  111 ttggtgttgaactctgattttataattataattaaattgattttgggaaacggggtgttaca 172  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  9273875 ttggtgttgaactctgattttatgattataattaaattgattatgggaaacggggtgttaca 9273936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 39 - 175
Target Start/End: Original strand, 31568439 - 31568575
Alignment:
Q  39 agttttatgaaggatgttgttaaatagttttaatctatttaagaatttatgtttagtagtgtgacatgccgtttggtgttgaactctgattttataatta 138  Q
    ||||| |||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||   || ||||||||||||||||||||    
T  31568439 agtttaatgaagtatgttgttaaatagttttaatctatttaagaatttatattttgtagtgtgacatgccgtttaacgtggaactctgattttataatta 31568538  T
Q  139 taattaaattgattttgggaaacggggtgttacaatt 175  Q
    |||||||||||||||||||||||||||||||||||||    
T  31568539 taattaaattgattttgggaaacggggtgttacaatt 31568575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 39 - 173
Target Start/End: Original strand, 18682132 - 18682267
Alignment:
Q  39 agttttatgaaggatgttgttaaatagttttaatctatttaagaatttatgtttagtagtgtgacatgccgtttggtgttgaactctgattttataa-tt 137  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||  ||| ||||||||||||||||| ||    
T  18682132 agtttaatgaaggatgttgttaaatagttttaatctatttaagaatttatattttgtagtgtgacatgccgtttaatgtggaactctgattttataattt 18682231  T
Q  138 ataattaaattgattttgggaaacggggtgttacaa 173  Q
    ||||||||||||||||||||||||||||||||||||    
T  18682232 ataattaaattgattttgggaaacggggtgttacaa 18682267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 39 - 174
Target Start/End: Original strand, 31573660 - 31573795
Alignment:
Q  39 agttttatgaaggatgttgttaaatagttttaatctatttaagaatttatgtttagtagtgtgacatgccgtttggtgttgaactctgattttataatta 138  Q
    ||||| |||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||   || ||||||||||||||||||||    
T  31573660 agtttaatgaagtatgttgttaaatagttttaatctatttaagaatttatattttgtagtgtgacatgccgtttaacgtggaactctgattttataatta 31573759  T
Q  139 taattaaattgattttgggaaacggggtgttacaat 174  Q
    ||||||||||||||||||||||||||||||||||||    
T  31573760 taattaaattgattttgggaaacggggtgttacaat 31573795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 39 - 172
Target Start/End: Complemental strand, 36798947 - 36798813
Alignment:
Q  39 agttttatgaaggatgttgttaaatagttttaatctatttaagaatttatgtttag-tagtgtgacatgccgtttggtgttgaactctgattttataatt 137  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||||  ||| |||||||||||||||||||    
T  36798947 agtttaatgaaggatgttgttaaatagttttaatctatttaagaatttatattttggtagtgtgacatgccgtttaatgtggaactctgattttataatt 36798848  T
Q  138 ataattaaattgattttgggaaacggggtgttaca 172  Q
    |||||||||||||||||||||||||||||||||||    
T  36798847 ataattaaattgattttgggaaacggggtgttaca 36798813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 45 - 172
Target Start/End: Original strand, 2373996 - 2374125
Alignment:
Q  45 atgaaggatgttgttaaatagttttaatctatttaagaa-tttatgtttagtagtgtgacatgccgtttggtgttg-aactctgattttataattataat 142  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| ||| | |||||||||| ||||||| ||||| |||||||||||||| ||||||||    
T  2373996 atgaaggatgttgttaaatagttttaatctatttaagaattttatattttgaagtgtgacataccgtttgatgttgaaactctgattttat-attataat 2374094  T
Q  143 taaattga-ttttgggaaacggggtgttaca 172  Q
    |||||||| ||||||||||||||||||||||    
T  2374095 taaattgatttttgggaaacggggtgttaca 2374125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 70 - 173
Target Start/End: Original strand, 18727725 - 18727829
Alignment:
Q  70 aatctatttaagaatttatgtttagtagtgtgacatgccgtttggtgttgaactctgattttataa-ttataattaaattgattttgggaaacggggtgt 168  Q
    ||||||||||||||||||| ||| |||||||||||||||||||  ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  18727725 aatctatttaagaatttatattttgtagtgtgacatgccgtttaatgtggaactctgattttataatttataattaaattgattttgggaaacggggtgt 18727824  T
Q  169 tacaa 173  Q
    |||||    
T  18727825 tacaa 18727829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 130 - 175
Target Start/End: Complemental strand, 22055212 - 22055167
Alignment:
Q  130 ttataattataattaaattgattttgggaaacggggtgttacaatt 175  Q
    |||| ||||| ||| |||||||||||||||||||||||||||||||    
T  22055212 ttattattattatttaattgattttgggaaacggggtgttacaatt 22055167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 136 - 175
Target Start/End: Original strand, 21322995 - 21323034
Alignment:
Q  136 ttataattaaattgattttgggaaacggggtgttacaatt 175  Q
    |||| ||||||||||||||||| |||||||||||||||||    
T  21322995 ttattattaaattgattttgggtaacggggtgttacaatt 21323034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 136 - 175
Target Start/End: Original strand, 22176637 - 22176676
Alignment:
Q  136 ttataattaaattgattttgggaaacggggtgttacaatt 175  Q
    |||| ||||||||||||||||| |||||||||||||||||    
T  22176637 ttattattaaattgattttgggtaacggggtgttacaatt 22176676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 173
Target Start/End: Original strand, 22064329 - 22064367
Alignment:
Q  135 attataattaaattgattttgggaaacggggtgttacaa 173  Q
    ||||| ||| |||||||||||||||||||||||||||||    
T  22064329 attattatttaattgattttgggaaacggggtgttacaa 22064367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 173
Target Start/End: Original strand, 29644331 - 29644369
Alignment:
Q  135 attataattaaattgattttgggaaacggggtgttacaa 173  Q
    ||||| ||| |||||||||||||||||||||||||||||    
T  29644331 attattatttaattgattttgggaaacggggtgttacaa 29644369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 175
Target Start/End: Complemental strand, 22049694 - 22049649
Alignment:
Q  130 ttataattataattaaattgattttgggaaacggggtgttacaatt 175  Q
    |||| ||||| ||| |||||||||||||||| ||||||||||||||    
T  22049694 ttattattattatttaattgattttgggaaatggggtgttacaatt 22049649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 172
Target Start/End: Complemental strand, 23771235 - 23771202
Alignment:
Q  139 taattaaattgattttgggaaacggggtgttaca 172  Q
    |||||||||||||||||| |||||||||||||||    
T  23771235 taattaaattgattttggaaaacggggtgttaca 23771202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 170
Target Start/End: Complemental strand, 44430809 - 44430780
Alignment:
Q  141 attaaattgattttgggaaacggggtgtta 170  Q
    ||||||||||||||||||||||||||||||    
T  44430809 attaaattgattttgggaaacggggtgtta 44430780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 172
Target Start/End: Original strand, 8415675 - 8415711
Alignment:
Q  136 ttataattaaattgattttgggaaacggggtgttaca 172  Q
    |||| |||||||||||||||| |||||||||||||||    
T  8415675 ttattattaaattgattttggaaaacggggtgttaca 8415711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 175
Target Start/End: Original strand, 22026718 - 22026758
Alignment:
Q  135 attataattaaattgattttgggaaacggggtgttacaatt 175  Q
    ||||| ||| ||||||||||||||||| |||||||||||||    
T  22026718 attattatttaattgattttgggaaacagggtgttacaatt 22026758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 173
Target Start/End: Complemental strand, 23373798 - 23373770
Alignment:
Q  145 aattgattttgggaaacggggtgttacaa 173  Q
    |||||||||||||||||||||||||||||    
T  23373798 aattgattttgggaaacggggtgttacaa 23373770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 41
Target Start/End: Original strand, 31568423 - 31568451
Alignment:
Q  13 aagaatattccgctgcagtttaatgaagt 41  Q
    |||||||||||||||||||||||||||||    
T  31568423 aagaatattccgctgcagtttaatgaagt 31568451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 41
Target Start/End: Original strand, 31573644 - 31573672
Alignment:
Q  13 aagaatattccgctgcagtttaatgaagt 41  Q
    |||||||||||||||||||||||||||||    
T  31573644 aagaatattccgctgcagtttaatgaagt 31573672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 117; Significance: 2e-59; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 12 - 172
Target Start/End: Complemental strand, 61483 - 61323
Alignment:
Q  12 gaagaatattccgctgcagtttaatgaagttttatgaaggatgttgttaaatagttttaatctatttaagaatttatgtttagtagtgtgacatgccgtt 111  Q
    ||||||||||||||||||  |||||||||||||||||| |||||||| |||||||||||  ||||||||||| || ||| |||| |||||||||||||||    
T  61483 gaagaatattccgctgcaaattaatgaagttttatgaaagatgttgtaaaatagttttatcctatttaagaaattttgtatagtggtgtgacatgccgtt 61384  T
Q  112 tggtgttgaactctgattttataattataattaaattgattttgggaaacggggtgttaca 172  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  61383 tggtgttgaactctgattttataattataattaaattgattttgggaaccggggtgttaca 61323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 117; Significance: 2e-59; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 12 - 172
Target Start/End: Complemental strand, 94498 - 94338
Alignment:
Q  12 gaagaatattccgctgcagtttaatgaagttttatgaaggatgttgttaaatagttttaatctatttaagaatttatgtttagtagtgtgacatgccgtt 111  Q
    |||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||  ||||||| ||| || ||| |||| |||||||||||||||    
T  94498 gaaggatattccgctgcaaattaatgaagttttatgaaggatgttgttaaatagttttatcctatttaggaaattttgtatagtggtgtgacatgccgtt 94399  T
Q  112 tggtgttgaactctgattttataattataattaaattgattttgggaaacggggtgttaca 172  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  94398 tggtgttgaactctgattttataattataattaaattgattttaggaaacggggtgttaca 94338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 117; Significance: 2e-59; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 12 - 172
Target Start/End: Complemental strand, 111522 - 111362
Alignment:
Q  12 gaagaatattccgctgcagtttaatgaagttttatgaaggatgttgttaaatagttttaatctatttaagaatttatgtttagtagtgtgacatgccgtt 111  Q
    ||||||||||||||||||  |||||| ||||||||||| ||||||||||||||||||||  ||||||||||| || ||| |||| |||||||||||||||    
T  111522 gaagaatattccgctgcaaattaatggagttttatgaaagatgttgttaaatagttttatcctatttaagaaattttgtatagtggtgtgacatgccgtt 111423  T
Q  112 tggtgttgaactctgattttataattataattaaattgattttgggaaacggggtgttaca 172  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  111422 tggtgtcgaactctgattttataattataattaaattgattttgggaaacggggtgttaca 111362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 114; Significance: 1e-57; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 12 - 172
Target Start/End: Complemental strand, 27279777 - 27279616
Alignment:
Q  12 gaagaatattccgctgcagtttaatgaagttttatgaaggatgttgttaaatagttttaatctatttaagaatttatgtttagtagtgtgacatgccgtt 111  Q
    ||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||   |||||||||| || ||| |||| |||||||||||||||    
T  27279777 gaagaatattccgctgcaaattaatgaagttttatgaaagatgttgttaaatagttttatcttatttaagaaattttgtatagtggtgtgacatgccgtt 27279678  T
Q  112 tggtgttgaactctgattttataattataattaaattgatttt-gggaaacggggtgttaca 172  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  27279677 tggtgttgaactctgattttataattataattaaattgattttggggaaacggggtgttaca 27279616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 7 - 145
Target Start/End: Complemental strand, 21697692 - 21697549
Alignment:
Q  7 atgtcgaagaatattccgctgcagtttaatgaagttttatgaaggatg-ttgttaaatagttt--taatctatttaagaatttatgtttagtagtgtgac 103  Q
    |||| ||||||||||||||||||  ||||||| ||||||||||||||| || |||||||||||  || |||||||||||| || ||   |||||||||||    
T  21697692 atgttgaagaatattccgctgcaaattaatgatgttttatgaaggatgtttattaaatagttttatattctatttaagaaattttgaaaagtagtgtgac 21697593  T
Q  104 atgcc--gtttggtgttgaactctgattttataattataattaa 145  Q
    |||||   ||||||||| |||||| || ||||| ||||| ||||    
T  21697592 atgcccgttttggtgttaaactctaatgttatatttatatttaa 21697549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 173
Target Start/End: Original strand, 2341759 - 2341796
Alignment:
Q  136 ttataattaaattgattttgggaaacggggtgttacaa 173  Q
    |||| |||||||||||||||||||||||||||||||||    
T  2341759 ttattattaaattgattttgggaaacggggtgttacaa 2341796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 172
Target Start/End: Complemental strand, 23630505 - 23630340
Alignment:
Q  12 gaagaatattccgctgcagtttaatgaagttttatgaaggatg-ttgttaaatagttt--taatctatttaagaatttatgtttagtagtgtgacatgcc 108  Q
    ||||||||||||||||||  ||| ||| |||||| ||| |||| || |||||||||||  || |||||||||||| || ||   ||||||||||||||||    
T  23630505 gaagaatattccgctgcaaattattgatgttttacgaaagatgtttattaaatagttttatattctatttaagaaattttgaaaagtagtgtgacatgcc 23630406  T
Q  109 --gtttggtgttgaactctgattttataattataattaaattgattttgggaaacggggtgttaca 172  Q
       |||| |||| ||||||| | ||||| |||| ||| ||||| ||| ||  | ||||||||||||    
T  23630405 cgatttgatgttaaactctgttgttatatttattatttaattgctttgggatatcggggtgttaca 23630340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 175
Target Start/End: Complemental strand, 19858600 - 19858558
Alignment:
Q  133 taattataattaaattgattttgggaaacggggtgttacaatt 175  Q
    ||||||| ||| ||||||||||||| |||||||||||||||||    
T  19858600 taattattatttaattgattttgggtaacggggtgttacaatt 19858558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 174
Target Start/End: Complemental strand, 21704620 - 21704591
Alignment:
Q  145 aattgattttgggaaacggggtgttacaat 174  Q
    ||||||||||||||||||||||||||||||    
T  21704620 aattgattttgggaaacggggtgttacaat 21704591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 176
Target Start/End: Complemental strand, 52990093 - 52990025
Alignment:
Q  107 ccgtttggtgttgaactctgattttataattataattaaattgattttgggaaacggggtgttacaattt 176  Q
    |||||||||| | ||||||||||  ||| || | ||| ||||||||||||| ||||||||||||||||||    
T  52990093 ccgtttggtgcttaactctgatta-atatttgttatttaattgattttgggtaacggggtgttacaattt 52990025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 173
Target Start/End: Original strand, 20032744 - 20032772
Alignment:
Q  145 aattgattttgggaaacggggtgttacaa 173  Q
    |||||||||||||||||||||||||||||    
T  20032744 aattgattttgggaaacggggtgttacaa 20032772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 93 - 170
Target Start/End: Complemental strand, 21734968 - 21734889
Alignment:
Q  93 agtagtgtgacatgccg--tttggtgttgaactctgattttataattataattaaattgattttgggaaacggggtgtta 170  Q
    ||||||||||||||||   ||||||||| ||||||||| ||||| |||| ||| ||||| ||| ||  ||||||||||||    
T  21734968 agtagtgtgacatgcccgttttggtgttaaactctgatgttatatttattatttaattgctttgggataacggggtgtta 21734889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 173
Target Start/End: Original strand, 23067456 - 23067484
Alignment:
Q  145 aattgattttgggaaacggggtgttacaa 173  Q
    |||||||||||||||||||||||||||||    
T  23067456 aattgattttgggaaacggggtgttacaa 23067484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 172
Target Start/End: Original strand, 29555182 - 29555218
Alignment:
Q  136 ttataattaaattgattttgggaaacggggtgttaca 172  Q
    |||| ||||||||||||||||| ||||||||||||||    
T  29555182 ttattattaaattgattttgggtaacggggtgttaca 29555218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 109; Significance: 9e-55; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 17 - 172
Target Start/End: Original strand, 60343 - 60499
Alignment:
Q  17 atattccgctgcagtttaatgaagttttatgaaggatgttgttaaatagttttaatctatttaagaatttatgtttagtagtgtgacatgccg-tttggt 115  Q
    |||||||||||||  ||||||||||||||||||||||||| |||||| ||||||  ||||||||||| || ||| |||||||||||||||||| ||||||    
T  60343 atattccgctgcaaattaatgaagttttatgaaggatgttattaaatcgttttatcctatttaagaaattttgtatagtagtgtgacatgccgttttggt 60442  T
Q  116 gttgaactctgattttataattataattaaattgattttgggaaacggggtgttaca 172  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  60443 gatgaactctgattttataattataattaaattgattttgggaaacggggtgttaca 60499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 172
Target Start/End: Original strand, 172550 - 172586
Alignment:
Q  136 ttataattaaattgattttgggaaacggggtgttaca 172  Q
    |||| ||||||||||||||||| ||||||||||||||    
T  172550 ttattattaaattgattttgggtaacggggtgttaca 172586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 106; Significance: 6e-53; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 39 - 172
Target Start/End: Original strand, 8965 - 9098
Alignment:
Q  39 agttttatgaaggatgttgttaaatagttttaatctatttaagaatttatgtttagtagtgtgacatgccgtttggtgttgaactctgattttataatta 138  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||   || ||||||||||||||||||||    
T  8965 agtttaatgaaggatgttgttaaatagttttaatctatttaagaatttatattttgtagtgtgacatgccgtttaacgtggaactctgattttataatta 9064  T
Q  139 taattaaattgattttgggaaacggggtgttaca 172  Q
    ||||||||||||||||||||||||||||||||||    
T  9065 taattaaattgattttgggaaacggggtgttaca 9098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 39 - 172
Target Start/End: Original strand, 44635 - 44767
Alignment:
Q  39 agttttatgaaggatgttgttaaatagttttaatctatttaagaatttatgtttagtagtgtgacatgccgtttggtgttgaactctgattttataatta 138  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||   || ||||||||| ||||||||||    
T  44635 agtttaatgaaggatgttgttaaatagttttaatctatttaagaatttatattttgtagtgtgacatgccgtttaacgtggaactctga-tttataatta 44733  T
Q  139 taattaaattgattttgggaaacggggtgttaca 172  Q
    ||||||||||||||||||||||||||||||||||    
T  44734 taattaaattgattttgggaaacggggtgttaca 44767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 106; Significance: 6e-53; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 12 - 172
Target Start/End: Original strand, 110 - 271
Alignment:
Q  12 gaagaatattccgctgcagtttaatgaagttttatgaaggatgttgttaaatagttttaatctatttaagaatttatgtttagtagtgtgacatgccgtt 111  Q
    ||||||||||||||||||  |||||| ||||||||||| ||||||||||||||||||||  ||||||||||| || ||| |||| |||||||||| ||||    
T  110 gaagaatattccgctgcaaattaatggagttttatgaaagatgttgttaaatagttttatcctatttaagaaattttgtatagtggtgtgacatgacgtt 209  T
Q  112 tggtgttgaactctga-ttttataattataattaaattgattttgggaaacggggtgttaca 172  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  210 tggtgtcgaactctgatttttataattataattaaattgattttgggaaacggggtgttaca 271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 94; Significance: 8e-46; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 12 - 172
Target Start/End: Complemental strand, 525633 - 525473
Alignment:
Q  12 gaagaatattccgctgcagtttaatgaagttttatgaaggatgttgttaaatagttttaatctatttaagaatttatgtttagtagtgtgacatgccgtt 111  Q
    ||||||||||||||||||  |||||| |||||| |||| |||||||| |||||| ||||  ||||||||||| || ||| |||| |||||||||||||||    
T  525633 gaagaatattccgctgcaaattaatggagttttgtgaaagatgttgt-aaatagatttatcctatttaagaaattttgtatagtggtgtgacatgccgtt 525535  T
Q  112 tggtgttgaactctgatttt-ataattataattaaattgattttgggaaacggggtgttaca 172  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  525534 tggtgtcgaactctgatttttataattataattaaattgattttgggaaacggggtgttaca 525473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 101 - 173
Target Start/End: Original strand, 178841 - 178914
Alignment:
Q  101 gacatgccgtttggtgttgaactctgatttt-ataattataattaaattgattttgggaaacggggtgttacaa 173  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  178841 gacatgccgtttggtgtcgaactctgatttttataattataattaaattgattttgggaaacggggtgttacaa 178914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 172
Target Start/End: Original strand, 494729 - 494766
Alignment:
Q  135 attataattaaattgattttgggaaacggggtgttaca 172  Q
    ||||| ||| ||||||||||||||||||||||||||||    
T  494729 attattatttaattgattttgggaaacggggtgttaca 494766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1914 (Bit Score: 84; Significance: 8e-40; HSPs: 1)
Name: scaffold1914
Description:

Target: scaffold1914; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 56 - 175
Target Start/End: Original strand, 146 - 263
Alignment:
Q  56 tgttaaatagttttaatctatttaagaatttatgtttagtagtgtgacatgccgtttggtgttgaactctgattttataattataattaaattgattttg 155  Q
    |||||||||||||||||||||| ||| |||||||||  |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  146 tgttaaatagttttaatctatt-aagtatttatgttg-gtagtgtgacatgccgtttgatgttgaactctgattttataaatataattaaattgattttg 243  T
Q  156 ggaaacggggtgttacaatt 175  Q
    || |||||||||||||||||    
T  244 gggaacggggtgttacaatt 263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1311 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold1311
Description:

Target: scaffold1311; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 7 - 172
Target Start/End: Complemental strand, 1892 - 1725
Alignment:
Q  7 atgtcgaagaatattccgctgcagtttaatgaagttttatgaaggatgttg-ttaaatagttttaatctatttaagaatttatgtttagtagtgtgacat 105  Q
    |||| ||||||||||||||||||  |||||||||| ||||||||||||||  |||||||||| || |||||||||||| || ||   ||| |||||||||    
T  1892 atgttgaagaatattccgctgcaaattaatgaagtcttatgaaggatgtttattaaatagttatattctatttaagaaattttgaaaagttgtgtgacat 1793  T
Q  106 gccgttt-ggtgttgaactctgattttataattataattaaattgattttgggaaacggggtgttaca 172  Q
    ||||||| |||| | ||||||||| ||||| |||| ||||||||||||||||||||||||||||||||    
T  1792 gccgttttggtgataaactctgatattatatttattattaaattgattttgggaaacggggtgttaca 1725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1156 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold1156
Description:

Target: scaffold1156; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 119 - 173
Target Start/End: Original strand, 4 - 58
Alignment:
Q  119 gaactctgattttataattataattaaattgattttgggaaacggggtgttacaa 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4 gaactctgattttataattataattaaattgattttgggaaacggggtgttacaa 58  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326 (Bit Score: 37; Significance: 0.000000000009; HSPs: 3)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 12 - 172
Target Start/End: Original strand, 6042 - 6207
Alignment:
Q  12 gaagaatattccgctgcagtttaatgaagttttatgaaggatgttg-ttaaatagttttaa--tctatttaagaatttatgtttagtagtgtgacatgcc 108  Q
    ||||||||||||||||||  ||| |||  ||||||||| ||||||  |||||||||||||   |||||||||||| || ||   |||||| |||||||||    
T  6042 gaagaatattccgctgcaaattattgatcttttatgaaagatgtttattaaatagttttatattctatttaagaaattttgaaaagtagtttgacatgcc 6141  T
Q  109 g--tttggtgttgaactctgattttataattataattaaattgattttggga-aacggggtgttaca 172  Q
       ||||||||| ||||||||| ||||| || | ||| ||||| |||||||| ||||||||||||||    
T  6142 cgttttggtgttaaactctgatgttatattttttatttaattg-ttttgggataacggggtgttaca 6207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 12 - 172
Target Start/End: Original strand, 13944 - 14109
Alignment:
Q  12 gaagaatattccgctgcagtttaatgaagttttatgaaggatgttg-ttaaatagttttaa--tctatttaagaatttatgtttagtagtgtgacatgcc 108  Q
    ||||||||||||||||||  ||| |||  ||||||||| ||||||  |||||||||||||   |||||||||||| || ||   |||||| |||||||||    
T  13944 gaagaatattccgctgcaaattattgatcttttatgaaagatgtttattaaatagttttatattctatttaagaaattttgaaaagtagtttgacatgcc 14043  T
Q  109 g--tttggtgttgaactctgattttataattataattaaattgattttggga-aacggggtgttaca 172  Q
       ||||||||| ||||||||| ||||| || | ||| ||||| |||||||| ||||||||||||||    
T  14044 cgttttggtgttaaactctgatgttatattttttatttaattg-ttttgggataacggggtgttaca 14109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 172
Target Start/End: Original strand, 16990 - 17028
Alignment:
Q  134 aattataattaaattgattttgggaaacggggtgttaca 172  Q
    |||||| ||| ||||||||||||||||||||||||||||    
T  16990 aattattatttaattgattttgggaaacggggtgttaca 17028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 107 - 175
Target Start/End: Original strand, 79093 - 79161
Alignment:
Q  107 ccgtttggtgttgaactctgattttataattataattaaattgattttgggaaacggggtgttacaatt 175  Q
    ||||||| |||| ||||||||| |||||||||| ||||| |  ||| ||||||||||||||||||||||    
T  79093 ccgtttgatgttaaactctgatgttataattattattaattgtattatgggaaacggggtgttacaatt 79161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 175
Target Start/End: Original strand, 28494 - 28561
Alignment:
Q  108 cgtttggtgttgaactctgattttataattataattaaattgattttgggaaacggggtgttacaatt 175  Q
    ||||||||||| ||||||||| ||||| |||| ||||| |  |||||||| |||||||||||||||||    
T  28494 cgtttggtgttaaactctgatgttatatttattattaattgtattttgggtaacggggtgttacaatt 28561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 136 - 175
Target Start/End: Complemental strand, 264535 - 264496
Alignment:
Q  136 ttataattaaattgattttgggaaacggggtgttacaatt 175  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  264535 ttattattaaattgattttgggaaacggggtgttacaatt 264496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 172
Target Start/End: Complemental strand, 258170 - 258134
Alignment:
Q  136 ttataattaaattgattttgggaaacggggtgttaca 172  Q
    |||| ||||||||||||||||||||||||||||||||    
T  258170 ttattattaaattgattttgggaaacggggtgttaca 258134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 94 - 173
Target Start/End: Complemental strand, 194582 - 194501
Alignment:
Q  94 gtagtgtgacatgccgtttggtgttgaactctgatttt--ataattataattaaattgattttgggaaacggggtgttacaa 173  Q
    |||||||||||||||  |||| |||  |||||||| ||  | |||||| ||| |||||||||||||||||||||||||||||    
T  194582 gtagtgtgacatgcccgttggggttttactctgatgttgaaaaattattatttaattgattttgggaaacggggtgttacaa 194501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 174
Target Start/End: Complemental strand, 136808 - 136775
Alignment:
Q  141 attaaattgattttgggaaacggggtgttacaat 174  Q
    |||||||||||||||| |||||||||||||||||    
T  136808 attaaattgattttggaaaacggggtgttacaat 136775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 173
Target Start/End: Original strand, 10498 - 10535
Alignment:
Q  136 ttataattaaattgattttgggaaacggggtgttacaa 173  Q
    |||| |||||||||||||||||||||||||||||||||    
T  10498 ttattattaaattgattttgggaaacggggtgttacaa 10535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 173
Target Start/End: Complemental strand, 1303 - 1266
Alignment:
Q  136 ttataattaaattgattttgggaaacggggtgttacaa 173  Q
    |||| |||||||||||||||||||||||||||||||||    
T  1303 ttattattaaattgattttgggaaacggggtgttacaa 1266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 33; Significance: 0.000000002; HSPs: 3)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 175
Target Start/End: Original strand, 63594 - 63662
Alignment:
Q  107 ccgtttggtgttgaactctgattttataattataattaaattgattttgggaaacggggtgttacaatt 175  Q
    |||||||||||| ||||||||| ||||| |||| ||||| || ||| || ||| |||||||||||||||    
T  63594 ccgtttggtgttaaactctgatgttatatttattattaattttattatgagaagcggggtgttacaatt 63662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 175
Target Start/End: Original strand, 64291 - 64359
Alignment:
Q  107 ccgtttggtgttgaactctgattttataattataattaaattgattttgggaaacggggtgttacaatt 175  Q
    |||||||||||| | ||||||| ||||| |||| ||||| || ||| |||||| |||||||||||||||    
T  64291 ccgtttggtgttaagctctgatgttatatttattattaattttattatgggaagcggggtgttacaatt 64359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 175
Target Start/End: Original strand, 81215 - 81245
Alignment:
Q  145 aattgattttgggaaacggggtgttacaatt 175  Q
    |||||||||||||||||||||||||||||||    
T  81215 aattgattttgggaaacggggtgttacaatt 81245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 172
Target Start/End: Original strand, 10011 - 10111
Alignment:
Q  72 tctatttaagaatttatgtttagtagtgtgacatgcc-gtttggtgttgaactctgattttataattataattaaattgattttggga-aacggggtgtt 169  Q
    |||||||||||| || ||  |||||| |||||||||| |||||||||| |||||||||||  || |||| ||| |||||  ||||||| |||||||||||    
T  10011 tctatttaagaaattttgaatagtagagtgacatgcccgtttggtgttaaactctgatttattatttattatttaattg--tttgggataacggggtgtt 10108  T
Q  170 aca 172  Q
    |||    
T  10109 aca 10111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 136 - 175
Target Start/End: Complemental strand, 39115 - 39076
Alignment:
Q  136 ttataattaaattgattttgggaaacggggtgttacaatt 175  Q
    |||| ||||||||||||||||| |||||||||||||||||    
T  39115 ttattattaaattgattttgggtaacggggtgttacaatt 39076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 136 - 175
Target Start/End: Complemental strand, 16377 - 16338
Alignment:
Q  136 ttataattaaattgattttgggaaacggggtgttacaatt 175  Q
    |||| ||||||||||||||||| |||||||||||||||||    
T  16377 ttattattaaattgattttgggtaacggggtgttacaatt 16338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 32; Significance: 0.000000008; HSPs: 3)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 136 - 175
Target Start/End: Original strand, 48179 - 48218
Alignment:
Q  136 ttataattaaattgattttgggaaacggggtgttacaatt 175  Q
    |||| ||||||||||||||||| |||||||||||||||||    
T  48179 ttattattaaattgattttgggtaacggggtgttacaatt 48218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 136 - 175
Target Start/End: Original strand, 57213 - 57252
Alignment:
Q  136 ttataattaaattgattttgggaaacggggtgttacaatt 175  Q
    |||| ||||||||||||||||| |||||||||||||||||    
T  57213 ttattattaaattgattttgggtaacggggtgttacaatt 57252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 136 - 175
Target Start/End: Original strand, 63599 - 63638
Alignment:
Q  136 ttataattaaattgattttgggaaacggggtgttacaatt 175  Q
    |||| ||||||||||||||||| |||||||||||||||||    
T  63599 ttattattaaattgattttgggtaacggggtgttacaatt 63638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0679
Description:

Target: scaffold0679; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 175
Target Start/End: Original strand, 40 - 70
Alignment:
Q  145 aattgattttgggaaacggggtgttacaatt 175  Q
    |||||||||||||||||||||||||||||||    
T  40 aattgattttgggaaacggggtgttacaatt 70  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 175
Target Start/End: Original strand, 7476 - 7506
Alignment:
Q  145 aattgattttgggaaacggggtgttacaatt 175  Q
    |||||||||||||||||||||||||||||||    
T  7476 aattgattttgggaaacggggtgttacaatt 7506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 175
Target Start/End: Original strand, 17690 - 17720
Alignment:
Q  145 aattgattttgggaaacggggtgttacaatt 175  Q
    |||||||||||||||||||||||||||||||    
T  17690 aattgattttgggaaacggggtgttacaatt 17720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 172
Target Start/End: Original strand, 6632 - 6709
Alignment:
Q  98 tgtgacatgcc-gtttggtgttgaactctgatttt--ataattataattaaattgattttgggaaacggggtgttaca 172  Q
    ||||||||||| |||||| |||  |||||||| ||  || ||||| ||| ||||||||||||||||||||||||||||    
T  6632 tgtgacatgcccgtttggggttttactctgatattgaattattattatttaattgattttgggaaacggggtgttaca 6709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 175
Target Start/End: Complemental strand, 26757 - 26727
Alignment:
Q  145 aattgattttgggaaacggggtgttacaatt 175  Q
    |||||||||||||||||||||||||||||||    
T  26757 aattgattttgggaaacggggtgttacaatt 26727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 172
Target Start/End: Original strand, 16186 - 16228
Alignment:
Q  130 ttataattataattaaattgattttgggaaacggggtgttaca 172  Q
    |||| ||||| ||| ||||||||||||||||||||||||||||    
T  16186 ttattattattatttaattgattttgggaaacggggtgttaca 16228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 172
Target Start/End: Original strand, 21148 - 21228
Alignment:
Q  94 gtagtgtgacatgcc-gtttggtgttgaactctgatttt--ataattataattaaattgattttgggaaacggggtgttaca 172  Q
    ||||||||||||||| |||||| |||  |||||||| ||  || ||||| ||| ||||||||||||||||||||||||||||    
T  21148 gtagtgtgacatgcctgtttgg-gttttactctgatgttgaattattattatttaattgattttgggaaacggggtgttaca 21228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 174
Target Start/End: Original strand, 626 - 655
Alignment:
Q  145 aattgattttgggaaacggggtgttacaat 174  Q
    ||||||||||||||||||||||||||||||    
T  626 aattgattttgggaaacggggtgttacaat 655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 175
Target Start/End: Complemental strand, 20198 - 20024
Alignment:
Q  7 atgtcgaagaatattccgctgcagtttaatgaagttttatgaaggatgttgtt----aaatagttttaa--tctatttaagaatttatgtttagtagtgt 100  Q
    |||| ||| |||||||| ||||| |||| ||| |||| || ||||||| ||||    |||||||||||   |||||||||||| || ||   ||||||||    
T  20198 atgttgaaaaatattccactgcaatttattgatgtttcataaaggatgatgtttattaaatagttttatattctatttaagaaattttgaaaagtagtgt 20099  T
Q  101 gacatgcc-gtttggtgttgaactctgattttataattataattaaattgattttggga-aacggggtgttacaatt 175  Q
    |||||||| ||| |||||| ||||||||| |  || |||| ||| |||||  ||||||| |||||||||||||||||    
T  20098 gacatgcccgttgggtgttaaactctgatgtattatttattatttaattg--tttgggataacggggtgttacaatt 20024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 172
Target Start/End: Complemental strand, 9792 - 9755
Alignment:
Q  135 attataattaaattgattttgggaaacggggtgttaca 172  Q
    ||||| ||| ||||||||||||||||||||||||||||    
T  9792 attattatttaattgattttgggaaacggggtgttaca 9755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 173
Target Start/End: Complemental strand, 7605 - 7568
Alignment:
Q  136 ttataattaaattgattttgggaaacggggtgttacaa 173  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  7605 ttattattaaattgactttgggaaacggggtgttacaa 7568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 173
Target Start/End: Complemental strand, 37834 - 37797
Alignment:
Q  136 ttataattaaattgattttgggaaacggggtgttacaa 173  Q
    |||| ||||||||||||||||| |||||||||||||||    
T  37834 ttattattaaattgattttgggtaacggggtgttacaa 37797  T

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Target: scaffold0108 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 172
Target Start/End: Complemental strand, 45035 - 44871
Alignment:
Q  12 gaagaatattccgctgcagtttaatgaagttttatgaaggatg-ttgttaaatagttt--taatctatttaagaatttatgtttagtagtgtgacatg-c 107  Q
    ||||||||||||||||||  ||| ||  ||||||||||||||| || |||||||||||  || |||||||||||| || ||    ||||| ||||||| |    
T  45035 gaagaatattccgctgcaaattactgttgttttatgaaggatgtttattaaatagttttatattctatttaagaaattttgaaacgtagtatgacatgcc 44936  T
Q  108 cgtttggtgttgaactctgattttataattataattaaattgattttgggaaacggggtgttaca 172  Q
    | |||||| || |||||||||||  || |||| ||| ||||| ||| ||  || |||||||||||    
T  44935 catttggtattaaactctgatttattatttattatttaattgctttgggataatggggtgttaca 44871  T

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Target: scaffold0063 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 172
Target Start/End: Complemental strand, 13444 - 13407
Alignment:
Q  135 attataattaaattgattttgggaaacggggtgttaca 172  Q
    ||||| ||| ||||||||||||||||||||||||||||    
T  13444 attattatttaattgattttgggaaacggggtgttaca 13407  T

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Target: scaffold0021 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 173
Target Start/End: Complemental strand, 140765 - 140728
Alignment:
Q  136 ttataattaaattgattttgggaaacggggtgttacaa 173  Q
    |||| |||||||||||||||||||||| ||||||||||    
T  140765 ttattattaaattgattttgggaaacgtggtgttacaa 140728  T

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Target: scaffold0706 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 172
Target Start/End: Original strand, 4067 - 4103
Alignment:
Q  136 ttataattaaattgattttgggaaacggggtgttaca 172  Q
    |||| ||||||||||||||||| ||||||||||||||    
T  4067 ttattattaaattgattttgggtaacggggtgttaca 4103  T

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Target: scaffold0503 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 93 - 172
Target Start/End: Original strand, 3180 - 3259
Alignment:
Q  93 agtagtgtgacatgcc-gtttggtgttgaactctgattttataattataattaaattgattttgggaaacggggtgttaca 172  Q
    |||||||||||||||| |||||||||| |||||||||||  || |||| ||| ||||| ||| ||  ||||||||||||||    
T  3180 agtagtgtgacatgcccgtttggtgttaaactctgatttattatttattatttaattg-tttgggttaacggggtgttaca 3259  T

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Target: scaffold0331 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 108
Target Start/End: Complemental strand, 18065 - 17966
Alignment:
Q  12 gaagaatattccgctgcagtttaatgaagttttatgaaggatg-ttgttaaata--gttttaatctatttaagaatttatgtttagtagtgtgacatgcc 108  Q
    ||||||||||||||||||  ||| ||| |||||||||| |||| || |||||||  ||| |||| |||||||||| || ||   ||||||||||||||||    
T  18065 gaagaatattccgctgcaaattattgaggttttatgaaagatgtttattaaatagtgttataatatatttaagaaattttgaaaagtagtgtgacatgcc 17966  T

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Target: scaffold0258 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 173
Target Start/End: Complemental strand, 24958 - 24930
Alignment:
Q  145 aattgattttgggaaacggggtgttacaa 173  Q
    |||||||||||||||||||||||||||||    
T  24958 aattgattttgggaaacggggtgttacaa 24930  T

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Target: scaffold0155 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 173
Target Start/End: Original strand, 196 - 224
Alignment:
Q  145 aattgattttgggaaacggggtgttacaa 173  Q
    |||||||||||||||||||||||||||||    
T  196 aattgattttgggaaacggggtgttacaa 224  T

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Target: scaffold0011 (Bit Score: 29; Significance: 0.0000005; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 108
Target Start/End: Complemental strand, 146564 - 146470
Alignment:
Q  16 aatattccgctgcagtttaatgaagttttatgaaggatgttg-ttaaatagtttta--atctatttaagaatttatgtttagtagtgtgacatgcc 108  Q
    ||||||||| ||||  ||||||| ||||| |||||||||||  |||||||||||||  ||||||||||||| || ||   ||||||||||||||||    
T  146564 aatattccgttgcaaattaatgatgtttt-tgaaggatgtttattaaatagttttataatctatttaagaaattttgaaaagtagtgtgacatgcc 146470  T

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Target: scaffold0011; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 172
Target Start/End: Complemental strand, 151814 - 151778
Alignment:
Q  136 ttataattaaattgattttgggaaacggggtgttaca 172  Q
    |||| |||||||||| |||||||||||||||||||||    
T  151814 ttattattaaattgactttgggaaacggggtgttaca 151778  T

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Target: scaffold0011; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 172
Target Start/End: Complemental strand, 257934 - 257898
Alignment:
Q  136 ttataattaaattgattttgggaaacggggtgttaca 172  Q
    |||| ||||||||||||||||| ||||||||||||||    
T  257934 ttattattaaattgattttgggtaacggggtgttaca 257898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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