View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19358_low_65 (Length: 351)
Name: NF19358_low_65
Description: NF19358
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19358_low_65 |
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Alignment Details
Target: chr7 (Bit Score: 285; Significance: 1e-160; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 15 - 337
Target Start/End: Complemental strand, 35651304 - 35650972
Alignment:
| Q |
15 |
aatatgagtcaaacatatatatata--aggttgcaaaaacatcaaaaactttgatgtggcaacagaaattgtggtgatgaacctttttcagagaatttag |
112 |
Q |
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| T |
35651304 |
aatatgagtcaaacatatatatatataaggttgcaaaaacatcaaaaactttggtgtggcaacagaaattgtggtgatgaacctttttcagagaatttag |
35651205 |
T |
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| Q |
113 |
tatgtgattccaaggttgaaaaggaattgttactgtgaaaatgtagaggtcttttttgagataaacagttgaacatcaagattaaaggacaaaataaata |
212 |
Q |
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| T |
35651204 |
tatgtgattccaaggttgaaaaggaattgttactgtgaaaatgtagaggtcttttttgagataaacagttgaacatcaagattaaaggacaaaataaata |
35651105 |
T |
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| Q |
213 |
aa--------taaagatagaaaatattatagttcacgggaatgttatactattattactatactgcatggggggtataaaagacaaggtagagctaaggg |
304 |
Q |
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| T |
35651104 |
aataaataaataaagatagaaaatattatagttcacgggaatgttatactattattactatactgcatggggtgtataaaagacaaggtagagctaaggg |
35651005 |
T |
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| Q |
305 |
tgataggttagtttatggtgtttccatgttctt |
337 |
Q |
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| T |
35651004 |
tgataggttagtttatggtgtttccatgttctt |
35650972 |
T |
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