View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19358_low_67 (Length: 341)
Name: NF19358_low_67
Description: NF19358
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19358_low_67 |
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Alignment Details
Target: chr7 (Bit Score: 294; Significance: 1e-165; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 1 - 330
Target Start/End: Complemental strand, 12020465 - 12020131
Alignment:
| Q |
1 |
acatgaaatttataacatgtgccatgagtggaggatgacaatggtgggtcccactcaaacatatatgatagacacgtggcgcatttgcattctgctgaca |
100 |
Q |
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| T |
12020465 |
acatgaaatttataacatgtgccatgagtggaggatgacaatggtgggtcccactcaaacatatatgatagacacgtggcgcatttgcattctactgaca |
12020366 |
T |
|
| Q |
101 |
tgttagccacttcaattccttaccattggttctgattagtctttaaatttggtaccagttttagttaattaatttgtattactcagaaaaagcaaggaac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12020365 |
tgttagccacttcaattccttaccattggttctgattagtctttaaatttggtaccagttttagttaattaatttgtattactcagaaaaagcaaggaac |
12020266 |
T |
|
| Q |
201 |
cttgtatt----gtatctcaccggttttgttgtgtttgttcacttagtgattatgtatccacacaagaacctcgtacgtacctgactgcttttgtgtcta |
296 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| | |
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| T |
12020265 |
cttgtattgtatgtatctcaccggttttgttgtgtttgttcacttggtgattatatatccacacaagaacctcgtacgtacctgactgcttttgtgtcca |
12020166 |
T |
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| Q |
297 |
tgttcattc-ttcttttttgaaaaagcatgttcat |
330 |
Q |
| |
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||||||||| ||||||||||||||||||||||||| |
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| T |
12020165 |
tgttcattctttcttttttgaaaaagcatgttcat |
12020131 |
T |
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