View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19358_low_84 (Length: 311)
Name: NF19358_low_84
Description: NF19358
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19358_low_84 |
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Alignment Details
Target: chr8 (Bit Score: 263; Significance: 1e-146; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 18 - 303
Target Start/End: Complemental strand, 28770244 - 28769961
Alignment:
| Q |
18 |
atgtgtacattcatgtgtatccttcaagaactaatttgcaaatgaaatcctaatcaataattataatattttctcgatttcaatcataatccatctcaac |
117 |
Q |
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| T |
28770244 |
atgtgtacattcatgtgtatccttcaagaactaatttgcaaatgaaatcctaatcaataattataatattttctcgatttcaatcataatccatctcaac |
28770145 |
T |
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| Q |
118 |
caccccgggcctttactcatcaatgaccatagtttctcaaccttatatctttcaacaacaaaacataacaactactccttcatatgtgggtcttaactct |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
28770144 |
caccccgggcctttactcatcaatgaccatagtttctcaaccttatatctttcaacaacaaaacataacaactactccttc--atgtgggtcttaactct |
28770047 |
T |
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| Q |
218 |
taagtaaggctgaaatttctgctagtggtaatgactactaactacaatggaaactactaatgatgtttaactaagcggcctttgct |
303 |
Q |
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||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
28770046 |
taattaaggctgaaatttctgccagtggtaatgactactaactacaatgaaaactactaatgatgtttaactaagcggcctttgct |
28769961 |
T |
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