View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19359_low_2 (Length: 312)
Name: NF19359_low_2
Description: NF19359
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19359_low_2 |
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Alignment Details
Target: chr8 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 19 - 310
Target Start/End: Original strand, 978253 - 978536
Alignment:
| Q |
19 |
aggaatggggtgatagttctcaaatatgatttcttttttcttcaattgattacattaaggaatacactttgtccctcggatgcgagcttcttaactaatc |
118 |
Q |
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| T |
978253 |
aggaatggggtgatagttctcaaatatgatttc-------ttcaattgattacattaaggaatacactttgtccctcggatgcgagcttcttaactaatc |
978345 |
T |
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| Q |
119 |
caaagaatgttaagtacgaagttgagatttctgtgagctactaaactaatgaaaacatgaataatcatactgccaaaacatcgtggcatacaaaatttag |
218 |
Q |
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||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
978346 |
taaagaatgttaagtacgaagttgagatttttgtgagctactaaactaatgaaaacatgaataatcatactgccaaaacatcgtggcatacaaaatttag |
978445 |
T |
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| Q |
219 |
tcctgacttgtttaatcgactattcttgcgagtaatgcgtgnnnnnnnnnngtcgaatgtacgtgccacccacatttgcctttgcttctcct |
310 |
Q |
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||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | ||||||| |
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| T |
978446 |
tcctgacttgtttaatcgactattcttgcgagtaatgcgtg-tttttttttgtcgaatgtacgtgccacccacatttgccttggtttctcct |
978536 |
T |
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