View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19359_low_3 (Length: 248)

Name: NF19359_low_3
Description: NF19359
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19359_low_3
NF19359_low_3
[»] chr8 (25 HSPs)
chr8 (98-215)||(39907297-39907414)
chr8 (14-92)||(29229181-29229259)
chr8 (18-96)||(38502517-38502595)
chr8 (17-98)||(14498303-14498384)
chr8 (16-93)||(946296-946373)
chr8 (17-93)||(37511415-37511491)
chr8 (17-93)||(29459961-29460037)
chr8 (14-93)||(15725894-15725972)
chr8 (14-93)||(23286889-23286967)
chr8 (17-93)||(34332438-34332513)
chr8 (17-100)||(10280886-10280969)
chr8 (14-85)||(12162952-12163023)
chr8 (14-85)||(12407380-12407451)
chr8 (17-103)||(28090517-28090602)
chr8 (26-93)||(39171002-39171068)
chr8 (25-98)||(23274957-23275031)
chr8 (17-93)||(29773771-29773846)
chr8 (25-97)||(36002693-36002765)
chr8 (17-93)||(44935225-44935300)
chr8 (14-93)||(37161832-37161916)
chr8 (25-73)||(23275124-23275173)
chr8 (17-74)||(39171105-39171161)
chr8 (18-93)||(17642400-17642475)
chr8 (18-100)||(36672007-36672089)
chr8 (55-91)||(43460714-43460750)
[»] chr4 (27 HSPs)
chr4 (14-98)||(33075978-33076062)
chr4 (17-100)||(34280221-34280304)
chr4 (17-97)||(30539886-30539966)
chr4 (17-93)||(47302306-47302382)
chr4 (17-97)||(43137371-43137451)
chr4 (14-93)||(11109600-11109679)
chr4 (14-102)||(3716649-3716736)
chr4 (17-97)||(46042027-46042107)
chr4 (17-93)||(48578911-48578986)
chr4 (14-97)||(27539241-27539323)
chr4 (14-93)||(30343151-30343230)
chr4 (14-97)||(52589396-52589478)
chr4 (14-99)||(28038009-28038093)
chr4 (17-93)||(37518969-37519045)
chr4 (17-93)||(37523185-37523261)
chr4 (17-93)||(41759663-41759738)
chr4 (17-93)||(52592119-52592195)
chr4 (17-93)||(37855448-37855524)
chr4 (17-85)||(55722804-55722871)
chr4 (14-93)||(51435816-51435895)
chr4 (14-93)||(38836174-38836252)
chr4 (14-93)||(53388850-53388928)
chr4 (17-62)||(14803039-14803084)
chr4 (18-93)||(31908769-31908844)
chr4 (18-93)||(36091385-36091460)
chr4 (25-93)||(9858583-9858651)
chr4 (53-93)||(31681548-31681588)
[»] chr1 (28 HSPs)
chr1 (17-97)||(18642195-18642275)
chr1 (17-97)||(39971269-39971349)
chr1 (17-100)||(45423941-45424024)
chr1 (17-97)||(23459549-23459629)
chr1 (17-97)||(39190563-39190643)
chr1 (17-96)||(45673643-45673722)
chr1 (17-93)||(8461531-8461607)
chr1 (17-97)||(46770731-46770811)
chr1 (17-94)||(51520140-51520217)
chr1 (17-93)||(35305478-35305554)
chr1 (17-98)||(37499069-37499149)
chr1 (17-93)||(23057027-23057103)
chr1 (17-93)||(23061328-23061404)
chr1 (25-93)||(51985269-51985337)
chr1 (17-99)||(38262132-38262213)
chr1 (17-102)||(6519982-6520066)
chr1 (17-93)||(921846-921921)
chr1 (25-80)||(43306866-43306921)
chr1 (14-76)||(50905903-50905964)
chr1 (25-98)||(51369652-51369725)
chr1 (17-93)||(5956530-5956606)
chr1 (17-85)||(28494097-28494164)
chr1 (14-93)||(26102477-26102555)
chr1 (17-74)||(52303340-52303396)
chr1 (18-93)||(50239281-50239356)
chr1 (25-54)||(29106408-29106437)
chr1 (53-93)||(26010946-26010986)
chr1 (53-93)||(51977862-51977902)
[»] chr6 (12 HSPs)
chr6 (17-100)||(13390714-13390797)
chr6 (17-97)||(4110881-4110961)
chr6 (25-97)||(1096550-1096622)
chr6 (14-91)||(8401420-8401497)
chr6 (17-93)||(6848841-6848916)
chr6 (17-97)||(26358552-26358632)
chr6 (17-93)||(32833778-32833854)
chr6 (17-104)||(2259231-2259317)
chr6 (17-78)||(24487304-24487365)
chr6 (17-93)||(17545930-17546005)
chr6 (17-91)||(24213238-24213312)
chr6 (53-93)||(15383207-15383247)
[»] chr3 (22 HSPs)
chr3 (17-99)||(47948390-47948472)
chr3 (17-98)||(40650397-40650478)
chr3 (17-97)||(35171191-35171271)
chr3 (17-97)||(42848190-42848270)
chr3 (14-93)||(44365933-44366011)
chr3 (17-93)||(42067905-42067981)
chr3 (17-98)||(29786532-29786613)
chr3 (23-98)||(29347310-29347385)
chr3 (14-76)||(31309203-31309264)
chr3 (17-98)||(378602-378682)
chr3 (25-93)||(38785086-38785155)
chr3 (23-100)||(39629945-39630022)
chr3 (17-93)||(876226-876302)
chr3 (17-85)||(46959878-46959946)
chr3 (14-93)||(42363932-42364010)
chr3 (17-98)||(11140572-11140652)
chr3 (17-93)||(44670263-44670338)
chr3 (36-98)||(37492241-37492303)
chr3 (17-93)||(45636415-45636491)
chr3 (18-93)||(9252180-9252255)
chr3 (52-103)||(52082037-52082088)
chr3 (18-99)||(52162710-52162791)
[»] chr7 (17 HSPs)
chr7 (17-97)||(30863119-30863199)
chr7 (17-99)||(30623718-30623800)
chr7 (17-97)||(38129385-38129465)
chr7 (17-98)||(27956611-27956692)
chr7 (17-93)||(41913100-41913175)
chr7 (14-93)||(40942200-40942278)
chr7 (24-93)||(45461660-45461729)
chr7 (17-93)||(28327393-28327469)
chr7 (17-99)||(42711256-42711337)
chr7 (17-93)||(41381809-41381885)
chr7 (17-67)||(3910257-3910307)
chr7 (17-93)||(1690997-1691073)
chr7 (14-91)||(21699298-21699374)
chr7 (18-93)||(30936098-30936173)
chr7 (18-98)||(44963822-44963902)
chr7 (53-93)||(18990450-18990490)
chr7 (25-85)||(45857487-45857547)
[»] chr5 (20 HSPs)
chr5 (17-97)||(3056722-3056802)
chr5 (17-97)||(36338845-36338925)
chr5 (17-97)||(2141568-2141648)
chr5 (17-97)||(1661692-1661772)
chr5 (17-97)||(18228460-18228540)
chr5 (17-102)||(2414250-2414335)
chr5 (17-98)||(9535193-9535274)
chr5 (17-98)||(32467369-32467450)
chr5 (17-100)||(13410868-13410951)
chr5 (14-102)||(43237350-43237437)
chr5 (14-100)||(34302972-34303057)
chr5 (14-98)||(42917442-42917525)
chr5 (14-93)||(6561150-6561228)
chr5 (17-78)||(21605976-21606037)
chr5 (17-104)||(24098196-24098283)
chr5 (23-84)||(6532912-6532973)
chr5 (15-66)||(6318317-6318367)
chr5 (18-93)||(13091240-13091315)
chr5 (17-62)||(6113808-6113853)
chr5 (17-62)||(2029679-2029724)
[»] chr2 (19 HSPs)
chr2 (17-99)||(42427566-42427648)
chr2 (14-99)||(3383189-3383274)
chr2 (17-92)||(15771314-15771389)
chr2 (17-93)||(4673605-4673681)
chr2 (17-91)||(11813198-11813272)
chr2 (18-83)||(33423048-33423113)
chr2 (17-93)||(14532828-14532904)
chr2 (17-93)||(37083537-37083613)
chr2 (17-76)||(6884488-6884547)
chr2 (17-93)||(5389206-5389281)
chr2 (25-93)||(34665905-34665972)
chr2 (14-93)||(1353831-1353908)
chr2 (14-98)||(59242-59326)
chr2 (25-74)||(3810473-3810522)
chr2 (16-93)||(38963071-38963147)
chr2 (17-93)||(11227954-11228029)
chr2 (58-93)||(34438191-34438226)
chr2 (53-93)||(33413068-33413108)
chr2 (53-93)||(37909720-37909760)
[»] scaffold0077 (1 HSPs)
scaffold0077 (17-93)||(48336-48411)
[»] scaffold0005 (1 HSPs)
scaffold0005 (17-62)||(36643-36688)
[»] scaffold0283 (1 HSPs)
scaffold0283 (32-93)||(6580-6640)
[»] scaffold0008 (1 HSPs)
scaffold0008 (18-83)||(45400-45465)
[»] scaffold0625 (1 HSPs)
scaffold0625 (53-93)||(6270-6310)


Alignment Details
Target: chr8 (Bit Score: 118; Significance: 3e-60; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 98 - 215
Target Start/End: Complemental strand, 39907414 - 39907297
Alignment:
Q  98 atattttgcagctgttcaaccgtcacgtggcatatattccatgattattatatcattgatatcatgatatggaattaagcatcgactgcttgtcgcatta 197  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39907414 atattttgcagctgttcaaccgtcacgtggcatatattccatgattattatatcattgatatcatgatatggaattaagcatcgactgcttgtcgcatta 39907315  T
Q  198 tttcacgttaacacgttc 215  Q
    ||||||||||||||||||    
T  39907314 tttcacgttaacacgttc 39907297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 29229259 - 29229181
Alignment:
Q  14 ataaaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaag 92  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  29229259 ataaaaaagtgatagttaatttataaaaattgtaagtgagagtaccggtacaccgtaatttacgggtgtaccgtagaag 29229181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 38502517 - 38502595
Alignment:
Q  18 aaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagtccc 96  Q
    |||| |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  38502517 aaaaatgatagttaatttataaaaattgtaagcgagaataccgatacaccgtaatttacgggtgtaccatagaagtccc 38502595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 17 - 98
Target Start/End: Complemental strand, 14498384 - 14498303
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagtcccca 98  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  14498384 aaaaaatgatagttaatttataaaaattgtaagtgagagtaccggtagaccgtaatttacgggtgtaccatagaaatcccca 14498303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 946296 - 946373
Alignment:
Q  16 aaaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||    
T  946296 aaaaaaatgatagttaatttataaaaattgtaagtgagagtaccggtacaccgtaatttgcgggtgtaccgtagaagt 946373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 37511415 - 37511491
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| |||||||    
T  37511415 aaaaaatgatagttaatttataaaaattgtaagcgagagtaccggtacaccttaatttacggatgtaccgtagaagt 37511491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 29459961 - 29460037
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| | |||||||| |||||||    
T  29459961 aaaaaatgatagttaatttataaaaattgtaagcgagagtaccggtacaccttaatttgcaggtgtaccgtagaagt 29460037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 14 - 93
Target Start/End: Complemental strand, 15725972 - 15725894
Alignment:
Q  14 ataaaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||| |||||||    
T  15725972 ataaaaaatt-atagttaatttataaaaattgtaagcgagagtatcggtacaccgtaatttgcaggtgtaccgtagaagt 15725894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 14 - 93
Target Start/End: Original strand, 23286889 - 23286967
Alignment:
Q  14 ataaaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||| |||||||    
T  23286889 ataaaaaaatgatagttaatttataaaaat-gtaagcgagagtaccggtacaccttaatttgcgggtgtaccgtagaagt 23286967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 34332438 - 34332513
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||| |||||||    
T  34332438 aaaaaatgatagttaatttataaaaat-gtaagcgagagtaccggtacaccttaatttgcgggtgtaccgtagaagt 34332513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 10280886 - 10280969
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagtccccata 100  Q
    ||||| ||||| |||||||||||||||| ||| ||||||||||| |||||||||||| ||||||||||||||||| ||| ||||    
T  10280886 aaaaaatgataattaatttataaaaattataaacgagagtaccgatacaccgtaattcacgggtgtaccatagaaatcctcata 10280969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 12163023 - 12162952
Alignment:
Q  14 ataaaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtacc 85  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||| ||||    
T  12163023 ataaaaaaatgatagttaatttataaaaattgtaagtgagagtaccggtacactgtaatttgcgggtatacc 12162952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 14 - 85
Target Start/End: Complemental strand, 12407451 - 12407380
Alignment:
Q  14 ataaaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtacc 85  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||| ||||    
T  12407451 ataaaaaaatgatagttaatttataaaaattgtaagtgagagtaccggtacactgtaatttgcgggtatacc 12407380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 28090517 - 28090602
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagtccccatattt 103  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||| || |||||||||| ||||||| ||| |||||    
T  28090517 aaaaaatgatagttaatttataaaaat-gtaagcgagagtaccggtacaccttaaattgcgggtgtaccgtagaagttcccttattt 28090602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 93
Target Start/End: Complemental strand, 39171068 - 39171002
Alignment:
Q  26 tagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||| |||||||    
T  39171068 tagttaatttataaaaat-gtaagcgagagtaccggtacaccttaatttgcgggtgtaccgtagaagt 39171002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 23274957 - 23275031
Alignment:
Q  25 atagttaatttataaaaattgtaagcgagagta-ccggtacaccgtaatttacgggtgtaccatagaagtcccca 98  Q
    ||||||||||||||||||||||||||||||||| |||||||||| |||||| |||||||| | ||||||| ||||    
T  23274957 atagttaatttataaaaattgtaagcgagagtacccggtacaccttaatttgcgggtgtatcgtagaagttccca 23275031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 29773771 - 29773846
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    ||||| ||||||||||||||||||||| |||||||| |||||||||||||| ||| || |||||||||| |||||||    
T  29773771 aaaaaatgatagttaatttataaaaat-gtaagcgaaagtaccggtacaccttaaattgcgggtgtaccgtagaagt 29773846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 36002693 - 36002765
Alignment:
Q  25 atagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagtcccc 97  Q
    |||||||||||||||||||||||| ||||||||| |   ||||||||||||| | ||||||||||||||||||    
T  36002693 atagttaatttataaaaattgtaaacgagagtactgaagcaccgtaatttacagatgtaccatagaagtcccc 36002765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 44935225 - 44935300
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    ||||| ||||||||||||||||||||| |||| |||||||||||||||||| ||| || |||||||||| |||||||    
T  44935225 aaaaaatgatagttaatttataaaaat-gtaaccgagagtaccggtacaccttaaattgcgggtgtaccgtagaagt 44935300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 93
Target Start/End: Original strand, 37161832 - 37161916
Alignment:
Q  14 ataaaaaattgatagttaatttataaaaattgtaagcgaga------gtaccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    |||||||||| |||||||||||||||||||| |||||||||      |||| ||||||||||||||||||| ||||||||||||||    
T  37161832 ataaaaaatt-atagttaatttataaaaattataagcgagagtactggtactggtacaccgtaatttacggatgtaccatagaagt 37161916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 73
Target Start/End: Original strand, 23275124 - 23275173
Alignment:
Q  25 atagttaatttataaaaattgtaagcgagagta-ccggtacaccgtaatt 73  Q
    ||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  23275124 atagttaatttataaaaattgtaagcgagagtacccggtacaccttaatt 23275173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 39171161 - 39171105
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaattt 74  Q
    ||||| ||||||||||||||||||||| |||||||||||||| |||||||| ||||||    
T  39171161 aaaaaatgatagttaatttataaaaat-gtaagcgagagtactggtacaccttaattt 39171105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 17642400 - 17642475
Alignment:
Q  18 aaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    |||| ||||||||||||||||||  ||  |||  |||||||||||||||| |||||| |||||||||| |||||||    
T  17642400 aaaaatgatagttaatttataaatttttgaagtaagagtaccggtacaccttaatttgcgggtgtaccgtagaagt 17642475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 100
Target Start/End: Complemental strand, 36672089 - 36672007
Alignment:
Q  18 aaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagtccccata 100  Q
    |||||||||||||| |||||| |  |   |||| ||||||||||||||||  |||||||| ||||||||||||||| ||||||    
T  36672089 aaaattgatagttagtttatagatttatgaagcaagagtaccggtacacctcaatttacgagtgtaccatagaagttcccata 36672007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 91
Target Start/End: Original strand, 43460714 - 43460750
Alignment:
Q  55 gtaccggtacaccgtaatttacgggtgtaccatagaa 91  Q
    ||||||||||||| ||||||| |||||||||||||||    
T  43460714 gtaccggtacaccttaatttaagggtgtaccatagaa 43460750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 81; Significance: 3e-38; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 14 - 98
Target Start/End: Complemental strand, 33076062 - 33075978
Alignment:
Q  14 ataaaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagtcccca 98  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33076062 ataaaaaaatgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagtcccca 33075978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 34280304 - 34280221
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagtccccata 100  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  34280304 aaaaaatgatagttaatttataaaaattgtaagcgagagtaccggtacaccgcaatttacgggtgtaccatagaagtccccata 34280221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 30539886 - 30539966
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagtcccc 97  Q
    ||||| |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  30539886 aaaaaatgatagttaatttataaaaattataagcgagagtaccagtacaccgtaatttacgggtgtaccatagaagtcccc 30539966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 47302306 - 47302382
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||    
T  47302306 aaaaaatgatagttaatttataaaaattataagcgagagtaccggtacaccgtaatttacgggtgtaccgtagaagt 47302382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 43137451 - 43137371
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagtcccc 97  Q
    ||||| ||||||||||||||| ||||||||||| |||||||||| |||||||||||| |||||||||||||||||||||||    
T  43137451 aaaaaatgatagttaatttattaaaattgtaagtgagagtaccgatacaccgtaattcacgggtgtaccatagaagtcccc 43137371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 14 - 93
Target Start/End: Complemental strand, 11109679 - 11109600
Alignment:
Q  14 ataaaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    |||||||| |||||||||||||||||||||| |||||||||||||||||||||| |||||| |||||||||| |||||||    
T  11109679 ataaaaaaatgatagttaatttataaaaattttaagcgagagtaccggtacaccttaatttgcgggtgtaccgtagaagt 11109600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 14 - 102
Target Start/End: Original strand, 3716649 - 3716736
Alignment:
Q  14 ataaaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagtccccatatt 102  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |  ||||||| ||||||| ||| ||||    
T  3716649 ataaaaaatt-atagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttccaagtgtaccgtagaagttcccttatt 3716736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 46042027 - 46042107
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagtcccc 97  Q
    ||||| |||||||||||||||||||||| ||| |||||||||||||||| ||||||| ||||||||||||||||| |||||    
T  46042027 aaaaaatgatagttaatttataaaaattataaacgagagtaccggtacatcgtaattcacgggtgtaccatagaaatcccc 46042107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 48578986 - 48578911
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  48578986 aaaaaatgatagttaatttataaaaat-gtaagcgagagtaccggtacaccttaatttacgggtgtaccgtagaagt 48578911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 27539241 - 27539323
Alignment:
Q  14 ataaaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagtcccc 97  Q
    |||||||||| |||||||||||||||||||| ||||| |||||||||||||||| |||||||||| |||||||||||| |||||    
T  27539241 ataaaaaatt-atagttaatttataaaaattataagcaagagtaccggtacaccataatttacggatgtaccatagaaatcccc 27539323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 14 - 93
Target Start/End: Original strand, 30343151 - 30343230
Alignment:
Q  14 ataaaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    |||||||| ||||||||||||||||||||||||||| ||||||| ||||| |||||||||| |||||||||| |||||||    
T  30343151 ataaaaaaatgatagttaatttataaaaattgtaagtgagagtagcggtaaaccgtaatttgcgggtgtaccgtagaagt 30343230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 52589396 - 52589478
Alignment:
Q  14 ataaaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagtcccc 97  Q
    |||||||||| |||||||||||||||||||| ||| | |||||| ||||||||||||||||||| |||||||||||||||||||    
T  52589396 ataaaaaatt-atagttaatttataaaaattataaacaagagtatcggtacaccgtaatttacgagtgtaccatagaagtcccc 52589478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 14 - 99
Target Start/End: Original strand, 28038009 - 28038093
Alignment:
Q  14 ataaaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagtccccat 99  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||||  ||||||||| ||||||| |||||    
T  28038009 ataaaaaaatgatagttaatttataaaaat-gtaagcgagagtaccggtacaccttaatttgtgggtgtaccgtagaagttcccat 28038093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 37519045 - 37518969
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    ||||| |||||||||||||||||||||||||||||||||||| | || || |||||||||||||||||| |||||||    
T  37519045 aaaaaatgatagttaatttataaaaattgtaagcgagagtactgatatactgtaatttacgggtgtaccgtagaagt 37518969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 37523261 - 37523185
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    ||||| |||||||||||||||||||||||||||||||||||| | || || |||||||||||||||||| |||||||    
T  37523261 aaaaaatgatagttaatttataaaaattgtaagcgagagtactgatatactgtaatttacgggtgtaccgtagaagt 37523185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 41759738 - 41759663
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||| |||||||    
T  41759738 aaaaaatgatagttaatttataaaaat-gtaagcgagagtaccggtacactttaatttacgggtgtaccgtagaagt 41759663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 52592119 - 52592195
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    ||||| ||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||| |||||||    
T  52592119 aaaaaatgataattactttataaaaattgtatgcgagagtaccggtacaccgtaatttacggatgtaccgtagaagt 52592195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 37855448 - 37855524
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    ||||| ||| ||||||||||||||||||||||||||| ||||||||||||| |||||||| | |||||| |||||||    
T  37855448 aaaaaatgacagttaatttataaaaattgtaagcgagggtaccggtacaccttaatttacagatgtaccgtagaagt 37855524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 85
Target Start/End: Original strand, 55722804 - 55722871
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtacc 85  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||||    
T  55722804 aaaaaatgatagttaatttataaaaat-gtaagcgagagtaccggtacaccttaatttgcgggtgtacc 55722871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 93
Target Start/End: Complemental strand, 51435895 - 51435816
Alignment:
Q  14 ataaaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    |||||||| |||||||||||||| ||||| |||||  |||||| |||||||||| |||||| ||||||||||||||||||    
T  51435895 ataaaaaaatgatagttaatttaaaaaaaatgtaaatgagagttccggtacaccttaatttgcgggtgtaccatagaagt 51435816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 93
Target Start/End: Original strand, 38836174 - 38836252
Alignment:
Q  14 ataaaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    |||||||||| ||| |||||||| |||| |||||||||||||||||| ||||||||||||| | |||||||| |||||||    
T  38836174 ataaaaaatt-ataattaatttacaaaagttgtaagcgagagtaccgatacaccgtaatttgcaggtgtaccgtagaagt 38836252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 93
Target Start/End: Complemental strand, 53388928 - 53388850
Alignment:
Q  14 ataaaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    |||||||| |||| |||||||||||||||| |||| |||||||||||||||||| |||||| | | ||||||||||||||    
T  53388928 ataaaaaaatgatggttaatttataaaaat-gtaaacgagagtaccggtacaccttaatttgcagatgtaccatagaagt 53388850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 14803039 - 14803084
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggt 62  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||    
T  14803039 aaaaaatgatagttaatttataaaaattgtaagcgagagtaccggt 14803084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 31908769 - 31908844
Alignment:
Q  18 aaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    |||||||||||||||||||||||  ||  |||  |||||||||||||||| |||||| |||||||||| |||||||    
T  31908769 aaaattgatagttaatttataaatttttgaagtaagagtaccggtacaccttaatttgcgggtgtaccgtagaagt 31908844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 36091385 - 36091460
Alignment:
Q  18 aaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    |||| ||||||||||||||||||  ||  |||  |||||||||||||||| |||||||| |||||||| |||||||    
T  36091385 aaaaatgatagttaatttataaatttttgaagtaagagtaccggtacaccttaatttacaggtgtaccgtagaagt 36091460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 93
Target Start/End: Original strand, 9858583 - 9858651
Alignment:
Q  25 atagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    ||||||||||||||||  ||  |||  |||||||||||||||| |||||| | |||||||| |||||||    
T  9858583 atagttaatttataaatttttgaagtaagagtaccggtacaccttaatttgcaggtgtaccgtagaagt 9858651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 93
Target Start/End: Original strand, 31681548 - 31681588
Alignment:
Q  53 gagtaccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    |||||| |||||||| ||||||||||||||||| |||||||    
T  31681548 gagtactggtacaccttaatttacgggtgtaccgtagaagt 31681588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 77; Significance: 8e-36; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 18642195 - 18642275
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagtcccc 97  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18642195 aaaaaatgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagtcccc 18642275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 39971349 - 39971269
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagtcccc 97  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39971349 aaaaaatgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagtcccc 39971269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 45423941 - 45424024
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagtccccata 100  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  45423941 aaaaaatgatagttaatttataaaaattgtaagcgagagtaccggtacatcgtaatttacgggtgtaccatagaagtccccata 45424024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 23459629 - 23459549
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagtcccc 97  Q
    ||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  23459629 aaaaaatgatagttaatttataaaaattataagcgagagtactggtacaccgtaatttacgggtgtaccatagaagtcccc 23459549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 39190643 - 39190563
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagtcccc 97  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  39190643 aaaaaatgatagttaatttataaaaattataagcgagagtaccggtacaccgtaatttactggtgtaccatagaagtcccc 39190563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 45673643 - 45673722
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagtccc 96  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  45673643 aaaaaatgatagttaacttataaaaattgtaagcgagagtaccggtacaccgtaatttacggatgtaccatagaagtccc 45673722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 8461607 - 8461531
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  8461607 aaaaaatgatagttaatttataaaaattgtaagtgagagtaccggtacaccgtaatttgcgggtgtaccatagaagt 8461531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 46770811 - 46770731
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagtcccc 97  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||    
T  46770811 aaaaaatgatagttaatttataaaaattgtaagtgagagtaccggtagaccgtaatttacgggtgtaccatagaaatcccc 46770731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 17 - 94
Target Start/End: Original strand, 51520140 - 51520217
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagtc 94  Q
    ||||| ||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||||||||||||    
T  51520140 aaaaaatgatagttaatttataaaaattgaaagtgagagtaccggtaccccgtaatttacgggtgtaccatagaagtc 51520217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 35305478 - 35305554
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |||||||    
T  35305478 aaaaaatgatagttaatttataaaaattgtaagcgagagtaccggtacaccttaatttacgagtgtaccgtagaagt 35305554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 98
Target Start/End: Original strand, 37499069 - 37499149
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagtcccca 98  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||||||||| ||||    
T  37499069 aaaaaatgatagttaatttataaaaat-gtaagcgagagtaccggtacaccttaatttgcgggtgtaccatagaagttccca 37499149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 23057027 - 23057103
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||||||||| |||||| |||||||||| |||||||    
T  23057027 aaaaaatgatagttaatttataaaaattgtaagcgagaggaccggtacaccttaatttgcgggtgtaccgtagaagt 23057103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 23061328 - 23061404
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| |||||||    
T  23061328 aaaaaatgataattaatttataaaaattgtaagcgagagtaccggtacaccttaatttgcgggtgtaccgtagaagt 23061404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 25 - 93
Target Start/End: Original strand, 51985269 - 51985337
Alignment:
Q  25 atagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||    
T  51985269 atagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttgcaggtgtaccgtagaagt 51985337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 99
Target Start/End: Complemental strand, 38262213 - 38262132
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagtccccat 99  Q
    ||||| ||||| ||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||| |||||||    
T  38262213 aaaaaatgataattaatttataaaaattgtaagcgagagta-cgatacaccgtaatctacgggtgtaccatagaaatccccat 38262132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 17 - 102
Target Start/End: Complemental strand, 6520066 - 6519982
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagtccccatatt 102  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| | |||||||| ||||||| ||| ||||    
T  6520066 aaaaaatgatagttaatttataaaaattgtaagcgagagtaccggtacaccttaatttgc-ggtgtaccgtagaagttcccttatt 6519982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 921921 - 921846
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    ||||| |||||||||||||||||||||||||| |||||||||||||||||| |||||| | ||||||||||||||||    
T  921921 aaaaaatgatagttaatttataaaaattgtaa-cgagagtaccggtacaccttaatttgcaggtgtaccatagaagt 921846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 43306866 - 43306921
Alignment:
Q  25 atagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggt 80  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  43306866 atagttaatttataaaaattgtaaacgagagtaccggtacaccgtaatttacgggt 43306921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 14 - 76
Target Start/End: Original strand, 50905903 - 50905964
Alignment:
Q  14 ataaaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttac 76  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  50905903 ataaaaaatt-atatttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttac 50905964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 51369652 - 51369725
Alignment:
Q  25 atagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagtcccca 98  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| | |||||||| || |||| ||||    
T  51369652 atagttaatttataaaaattgtaagcgagagtaccggtacaccttaatttgcaggtgtaccgtaaaagttccca 51369725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 5956606 - 5956530
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||||| | ||||||  ||||||||| |||||||    
T  5956606 aaaaaatgatagttaatttataaaaattataagcgagagtaccggtacagcttaatttgtgggtgtaccgtagaagt 5956530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 17 - 85
Target Start/End: Original strand, 28494097 - 28494164
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtacc 85  Q
    ||||| ||||||||||||||||||||| |||||| |||||||||||||||| |||||| ||||||||||    
T  28494097 aaaaaatgatagttaatttataaaaat-gtaagcaagagtaccggtacaccttaatttgcgggtgtacc 28494164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 93
Target Start/End: Complemental strand, 26102555 - 26102477
Alignment:
Q  14 ataaaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    |||||||||| ||||||||||||||||||| ||||  |||| || |||||||||||||||||  |||||||| |||||||    
T  26102555 ataaaaaatt-atagttaatttataaaaatcgtaaatgagaatatcggtacaccgtaatttagaggtgtaccgtagaagt 26102477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 52303340 - 52303396
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaattt 74  Q
    ||||| ||||||||||||||||||||| ||||| ||||||||||||||||| ||||||    
T  52303340 aaaaaatgatagttaatttataaaaat-gtaagtgagagtaccggtacaccttaattt 52303396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 50239356 - 50239281
Alignment:
Q  18 aaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    |||| ||||||||||||||||||  ||  |||  |||||||||||||||| |||||| |||||||||| |||||||    
T  50239356 aaaaatgatagttaatttataaatttttgaagtaagagtaccggtacaccttaatttgcgggtgtaccgtagaagt 50239281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 54
Target Start/End: Complemental strand, 29106437 - 29106408
Alignment:
Q  25 atagttaatttataaaaattgtaagcgaga 54  Q
    ||||||||||||||||||||||||||||||    
T  29106437 atagttaatttataaaaattgtaagcgaga 29106408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 93
Target Start/End: Complemental strand, 26010986 - 26010946
Alignment:
Q  53 gagtaccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    ||||||||||||||| |||||| |||||||||| |||||||    
T  26010986 gagtaccggtacaccttaatttgcgggtgtaccgtagaagt 26010946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 93
Target Start/End: Complemental strand, 51977902 - 51977862
Alignment:
Q  53 gagtaccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    ||||||||||||||| |||||| |||||||||| |||||||    
T  51977902 gagtaccggtacaccttaatttgcgggtgtaccgtagaagt 51977862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 76; Significance: 3e-35; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 13390714 - 13390797
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagtccccata 100  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  13390714 aaaaaatgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacaggtgtaccatagaagtccccata 13390797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 4110881 - 4110961
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagtcccc 97  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  4110881 aaaaaatgatagttaatttataaaaattgtaagcgagagaaccggtacaccgtaatttacgggtgtaccatagaagtcccc 4110961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 1096550 - 1096622
Alignment:
Q  25 atagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagtcccc 97  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1096550 atagttaatttataaaaattataagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagtcccc 1096622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 91
Target Start/End: Complemental strand, 8401497 - 8401420
Alignment:
Q  14 ataaaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaa 91  Q
    |||||||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||||||| |||||    
T  8401497 ataaaaaaatgatagttaatttataaaaattgtaagtgagagtagcggtacaccgtaatttgcgggtgtaccgtagaa 8401420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 6848841 - 6848916
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  6848841 aaaaaatgatagttaatttataaaaat-gtaagcgagagtaccggtacaccttaatttacgggtgtaccgtagaagt 6848916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 26358632 - 26358552
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagtcccc 97  Q
    ||||| |||||||||||||||||||||| ||||||||||||| |||||||| |||||||||| ||||||||| ||||||||    
T  26358632 aaaaaatgatagttaatttataaaaattataagcgagagtactggtacaccataatttacggttgtaccataaaagtcccc 26358552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 32833854 - 32833778
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||| |||||||    
T  32833854 aaaaaatgatagttaatttataaaaattgtaagcgagagtaccagtacaccgtaatttgcggatgtaccgtagaagt 32833778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 2259231 - 2259317
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagtccccatatttt 104  Q
    ||||| ||||||||||||||||||||| ||||||||||||||| ||||||| |||||| |||||||||| ||||||| ||| ||||||    
T  2259231 aaaaaatgatagttaatttataaaaat-gtaagcgagagtacctgtacaccttaatttgcgggtgtaccgtagaagttcccttatttt 2259317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 78
Target Start/End: Complemental strand, 24487365 - 24487304
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgg 78  Q
    ||||| |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  24487365 aaaaaatgatagttaacttataaaaattgtaagcgagagtaccggtacaccttaatttacgg 24487304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 17545930 - 17546005
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    ||||| ||||||||||||||||||||| ||||||||||||||| ||||||| |||||| ||||||||| ||||||||    
T  17545930 aaaaaatgatagttaatttataaaaat-gtaagcgagagtaccagtacaccttaatttgcgggtgtactatagaagt 17546005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 91
Target Start/End: Original strand, 24213238 - 24213312
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaa 91  Q
    ||||| ||||||||||||||||||||||||||| || ||||||| || |||||||||| |||||||||| |||||    
T  24213238 aaaaaatgatagttaatttataaaaattgtaagtgaaagtaccgatataccgtaatttgcgggtgtaccgtagaa 24213312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 93
Target Start/End: Complemental strand, 15383247 - 15383207
Alignment:
Q  53 gagtaccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    ||||||||||||||| |||||| |||||||||| |||||||    
T  15383247 gagtaccggtacaccttaatttgcgggtgtaccgtagaagt 15383207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 75; Significance: 1e-34; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 17 - 99
Target Start/End: Complemental strand, 47948472 - 47948390
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagtccccat 99  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  47948472 aaaaaatgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtcatttacgggtgtaccatagaagtccccat 47948390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 17 - 98
Target Start/End: Original strand, 40650397 - 40650478
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagtcccca 98  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  40650397 aaaaaatgatagttaatttataaaaattgtaagcgagagtaccgatacaccgtaatttacgagtgtaccatagaagtcccca 40650478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 35171271 - 35171191
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagtcccc 97  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  35171271 aaaaaatgatagttaatttataaaaattataagcgagagtaccggtacaccgtaatttacgggtgtaccatagaaatcccc 35171191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 42848270 - 42848190
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagtcccc 97  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||    
T  42848270 aaaaaatgatagttaatttataaaaattgtaagcgggagtaccggtacaccgtcatttacgggtgtatcatagaagtcccc 42848190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 14 - 93
Target Start/End: Original strand, 44365933 - 44366011
Alignment:
Q  14 ataaaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  44365933 ataaaaaaatgatagttaatttataaaaat-gtaagcgagagtaccggtacaccttaatttacgggtgtaccatagaagt 44366011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 42067905 - 42067981
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| |||||||    
T  42067905 aaaaaatgatagttaatttataaaaattgtaagcgagagtaccggtacaccttaatttgcgggtgtaccgtagaagt 42067981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 98
Target Start/End: Complemental strand, 29786613 - 29786532
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagtcccca 98  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| | |||||||| ||||||| ||||    
T  29786613 aaaaaatgatagttaatttataaaaattgtaagcgagagtaccggtacaccttaatttgcaggtgtaccgtagaagttccca 29786532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 23 - 98
Target Start/End: Complemental strand, 29347385 - 29347310
Alignment:
Q  23 tgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagtcccca 98  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||| ||||||| ||||    
T  29347385 tgatagttaatttataaaaattgtaagcgagagtaccggtacactgcaatttgcgggtgtaccgtagaagttccca 29347310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 14 - 76
Target Start/End: Original strand, 31309203 - 31309264
Alignment:
Q  14 ataaaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttac 76  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  31309203 ataaaaaatt-atagttaatttataaaaattgtaaccgagagtaccggtacaccgtaatttac 31309264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 98
Target Start/End: Complemental strand, 378682 - 378602
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagtcccca 98  Q
    ||||| ||||||||||||||||||||||  ||| ||  |||||||||||| |||||||||||||||||||||||||||||||    
T  378682 aaaaaatgatagttaatttataaaaatta-aagtgatggtaccggtacactgtaatttacgggtgtaccatagaagtcccca 378602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 38785155 - 38785086
Alignment:
Q  25 atagttaatttataaaaa-ttgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| | |||||||| |||||||    
T  38785155 atagttaatttataaaaaattgtaagcgagagtaccggtacaccgtaatttgcaggtgtaccgtagaagt 38785086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 23 - 100
Target Start/End: Complemental strand, 39630022 - 39629945
Alignment:
Q  23 tgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagtccccata 100  Q
    |||||||||||||||||||||||||||||| |||||||||||| | |||||| ||| |||||| ||||||| ||||||    
T  39630022 tgatagttaatttataaaaattgtaagcgatagtaccggtacatcttaatttgcggatgtaccgtagaagttcccata 39629945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 876302 - 876226
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    ||||| |||||||||| ||||||||||| |||||||||||||| ||||| |||||||| |||||||||| |||||||    
T  876302 aaaaaatgatagttaaattataaaaattataagcgagagtaccagtacatcgtaatttgcgggtgtaccgtagaagt 876226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 85
Target Start/End: Original strand, 46959878 - 46959946
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtacc 85  Q
    ||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||| | ||||||||    
T  46959878 aaaaaatgatagttaatttataaaagttgtaagcgagagtaccgatacaccgtaatttgcaggtgtacc 46959946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 93
Target Start/End: Complemental strand, 42364010 - 42363932
Alignment:
Q  14 ataaaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    |||||||||| |||||||| ||||||||||||||||| ||||||||| ||||||||||||| | |||||||| |||||||    
T  42364010 ataaaaaatt-atagttaaattataaaaattgtaagctagagtaccgatacaccgtaatttgcaggtgtaccgtagaagt 42363932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 98
Target Start/End: Original strand, 11140572 - 11140652
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagtcccca 98  Q
    ||||| ||||||||  ||||||||||| ||||||||||||||||||||||| |||||| |||||||||| ||||||| ||||    
T  11140572 aaaaaatgatagtttgtttataaaaat-gtaagcgagagtaccggtacaccttaatttgcgggtgtaccgtagaagttccca 11140652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 44670338 - 44670263
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    ||||| |||||||||||||||||||| ||||||||| |||||||| ||||| |||||||||| |||||| |||||||    
T  44670338 aaaaaatgatagttaatttataaaaa-tgtaagcgaaagtaccggcacaccttaatttacggatgtaccgtagaagt 44670263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 36 - 98
Target Start/End: Original strand, 37492241 - 37492303
Alignment:
Q  36 ataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagtcccca 98  Q
    ||||||||| ||||||||||||||||||||||||||||| ||| |||||| ||||||| ||||    
T  37492241 ataaaaattataagcgagagtaccggtacaccgtaatttgcggatgtaccgtagaagttccca 37492303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 45636415 - 45636491
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    ||||| |||||||||||||||||||||| |||||||| ||||| ||| |   ||||||||| ||||||| |||||||    
T  45636415 aaaaaatgatagttaatttataaaaattataagcgagtgtaccagtatattttaatttacgagtgtaccgtagaagt 45636491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 9252180 - 9252255
Alignment:
Q  18 aaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    ||||||||| ||||||||||| | ||   |||| ||||||||||||||||  |||||||| ||||||| |||||||    
T  9252180 aaaattgatcgttaatttatagatatatgaagcaagagtaccggtacacctcaatttacgagtgtaccgtagaagt 9252255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 103
Target Start/End: Complemental strand, 52082088 - 52082037
Alignment:
Q  52 agagtaccggtacaccgtaatttacgggtgtaccatagaagtccccatattt 103  Q
    |||||||||||||||| |||||| |||||||||| ||||||| | |||||||    
T  52082088 agagtaccggtacaccttaatttgcgggtgtaccgtagaagttctcatattt 52082037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 52162710 - 52162791
Alignment:
Q  18 aaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagtccccat 99  Q
    ||||||||| ||||||||||| |  | | || | ||||||||||||||| | |||||||| ||||| | |||||||||||||    
T  52162710 aaaattgatcgttaatttatagatttaggaaacaagagtaccggtacactgcaatttacgagtgtatcgtagaagtccccat 52162791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 73; Significance: 2e-33; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 30863119 - 30863199
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagtcccc 97  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  30863119 aaaaaatgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtacaatagaagtcccc 30863199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 17 - 99
Target Start/End: Complemental strand, 30623800 - 30623718
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagtccccat 99  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  30623800 aaaaaatgatagttaatttataaaaattgtaagcgagagtatcggtacaccgtaatttatgggtgtaccatagaagtccccat 30623718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 38129465 - 38129385
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagtcccc 97  Q
    ||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  38129465 aaaaaatgatagttaatttataaaaattgtaagcaagaataccggtacaccgtaatttacgggtgtaccatagaagtcccc 38129385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 17 - 98
Target Start/End: Original strand, 27956611 - 27956692
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagtcccca 98  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||    
T  27956611 aaaaaatgatagttaatttataaaatttgtaagcgagagtaccggtacaccttaatttgcgggtgtaccatagaagttccca 27956692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 41913175 - 41913100
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  41913175 aaaaaatgatagttaatttataaaaat-gtaagcgagagtaccggtacaccttaatttgcgggtgtaccatagaagt 41913100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 14 - 93
Target Start/End: Original strand, 40942200 - 40942278
Alignment:
Q  14 ataaaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||||||| | |||||||||| ||||||||||||||    
T  40942200 ataaaaaaatgatagttaatttataaaaat-gtaagcgagagtaccggtacatcttaatttacggatgtaccatagaagt 40942278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 45461660 - 45461729
Alignment:
Q  24 gatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||    
T  45461660 gatagttaaattataaaaattgtaagcgagagtaccggtacaccgtaatttgcaggtgtaccgtagaagt 45461729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 28327393 - 28327469
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||||||| | |||||| |||||||||| |||||||    
T  28327393 aaaaaatgatagttaatttataaaaattgtaagcgagaggaccggtacagcttaatttgcgggtgtaccgtagaagt 28327469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 42711256 - 42711337
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagtccccat 99  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||||| |||||| ||| |||||| ||||||| |||||    
T  42711256 aaaaaatgatagttaatttataaaaat-gtaagcgagagtaccggtacaccttaatttgcggatgtaccgtagaagttcccat 42711337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 41381809 - 41381885
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    ||||| |||||||||||||||||||||||||||| | ||||||||| |||  ||||||||||||||||| |||||||    
T  41381809 aaaaaatgatagttaatttataaaaattgtaagcaaaagtaccggtgcacattaatttacgggtgtaccgtagaagt 41381885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 67
Target Start/End: Original strand, 3910257 - 3910307
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacacc 67  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  3910257 aaaaaatgatagttaatttataaaaattgtaagcgagagtaccggtacacc 3910307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 1691073 - 1690997
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    ||||| |||||||||||||| |||||||||||  ||||||||||||| ||| ||||||||||||||||  |||||||    
T  1691073 aaaaaatgatagttaatttaaaaaaattgtaaatgagagtaccggtataccataatttacgggtgtacggtagaagt 1690997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 14 - 91
Target Start/End: Complemental strand, 21699374 - 21699298
Alignment:
Q  14 ataaaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaa 91  Q
    |||||||| ||||| ||||||||||||||| |||| |||||||| ||||||||| |||||| || |||||||||||||    
T  21699374 ataaaaaaatgataattaatttataaaaat-gtaaacgagagtatcggtacaccttaatttgcgagtgtaccatagaa 21699298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 30936173 - 30936098
Alignment:
Q  18 aaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    |||||||||||||||||||||||  ||  |||  |||||||||||||||| |||||| |||||||||| |||||||    
T  30936173 aaaattgatagttaatttataaatttttgaagtaagagtaccggtacaccttaatttgcgggtgtaccgtagaagt 30936098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 98
Target Start/End: Complemental strand, 44963902 - 44963822
Alignment:
Q  18 aaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagtcccca 98  Q
    |||| ||||||||||||||||||  ||  |||  |||||||||||||||| ||| ||  ||||||||||||||||| ||||    
T  44963902 aaaaatgatagttaatttataaatttttgaagtaagagtaccggtacaccttaaattgtgggtgtaccatagaagttccca 44963822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 93
Target Start/End: Original strand, 18990450 - 18990490
Alignment:
Q  53 gagtaccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    ||||||||||||||| |||||| |||||||||| |||||||    
T  18990450 gagtaccggtacaccttaatttgcgggtgtaccgtagaagt 18990490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 85
Target Start/End: Complemental strand, 45857547 - 45857487
Alignment:
Q  25 atagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtacc 85  Q
    ||||||||||||||||  ||  |||  |||||||||||||||| |||||| ||||||||||    
T  45857547 atagttaatttataaatttttgaagtaagagtaccggtacaccttaatttgcgggtgtacc 45857487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 73; Significance: 2e-33; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 3056722 - 3056802
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagtcccc 97  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  3056722 aaaaaatgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgagtgtaccatagaagtcccc 3056802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 36338925 - 36338845
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagtcccc 97  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  36338925 aaaaaatgatagttaatttataaaaattgtaagcgagagtactggtacaccgtaatttacgggtgtaccatagaagtcccc 36338845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 2141568 - 2141648
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagtcccc 97  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  2141568 aaaaaatgatagttaatttataaaaattgtaagcgagagtaacggtacaccgtaatttatgggtgtaccatagaagtcccc 2141648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 1661772 - 1661692
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagtcccc 97  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||    
T  1661772 aaaaaatgatagttaatttataaaaattgtaagcgagagcaccggtacaccgtaatttacaggtgtaccatataagtcccc 1661692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 18228540 - 18228460
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagtcccc 97  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||    
T  18228540 aaaaaatgatagttaatttataaaaattgtaagtgagagtaccggtagaccgtaatttacgggtgtaccatagaaatcccc 18228460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 2414250 - 2414335
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagtccccatatt 102  Q
    ||||| ||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||| |||||||||||||||||| ||||    
T  2414250 aaaaaatgatagttaatttataaaaattgtaagtgagagtaccgttacactgtaatttacggatgtaccatagaagtccccttatt 2414335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 17 - 98
Target Start/End: Original strand, 9535193 - 9535274
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagtcccca 98  Q
    ||||| ||||||||||||||||||||||||||| |||||||||| |||||  ||||||||||||||||||||||||||||||    
T  9535193 aaaaaatgatagttaatttataaaaattgtaagtgagagtaccgttacactttaatttacgggtgtaccatagaagtcccca 9535274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 17 - 98
Target Start/End: Original strand, 32467369 - 32467450
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagtcccca 98  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| ||||||| ||||    
T  32467369 aaaaaatgatagttaatttataaaaattgcaagcgagagtaccggtacaccgtaatttgcgggtgtaccgtagaagttccca 32467450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 13410868 - 13410951
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagtccccata 100  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||| ||||||| ||||||    
T  13410868 aaaaaatgatagttaatttataaaaattgtaagcgagagtaccggtacaccttaatttgcggatgtaccgtagaagttcccata 13410951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 14 - 102
Target Start/End: Complemental strand, 43237437 - 43237350
Alignment:
Q  14 ataaaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagtccccatatt 102  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||| | |||||||||||||||| ||| ||||    
T  43237437 ataaaaaatt-ataattaatttataaaaattgtaagcgagagtaccgatacaccgtaatttgcaggtgtaccatagaagttcccttatt 43237350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 100
Target Start/End: Original strand, 34302972 - 34303057
Alignment:
Q  14 ataaaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagtccccata 100  Q
    |||||||||| |||||||||||||||||||| |||| |||||||||||||||||||||||| | |||||||| ||||||| ||||||    
T  34302972 ataaaaaatt-atagttaatttataaaaattataagtgagagtaccggtacaccgtaatttgcaggtgtaccgtagaagttcccata 34303057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 98
Target Start/End: Original strand, 42917442 - 42917525
Alignment:
Q  14 ataaaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagtcccca 98  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||||  |||||||||||| |||| ||||    
T  42917442 ataaaaaaatgatagttaatttataaaaat-gtaagcgagagtaccggtacaccttaatttgtgggtgtaccataaaagttccca 42917525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 14 - 93
Target Start/End: Original strand, 6561150 - 6561228
Alignment:
Q  14 ataaaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    |||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||| | |||||||| |||||||    
T  6561150 ataaaaaatt-atagttaatttataaaaattgtaagcaagaataccggtacaccgtaatttgcaggtgtaccgtagaagt 6561228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 21605976 - 21606037
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgg 78  Q
    ||||| |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  21605976 aaaaaatgatagttaacttataaaaattgtaagcgagagtaccggtacaccttaatttacgg 21606037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 24098196 - 24098283
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagtccccatatttt 104  Q
    ||||| ||||| || |||||||||||||||||||||||||||| |||||||||||||| | |||||||  ||||||| ||| ||||||    
T  24098196 aaaaaatgatattttatttataaaaattgtaagcgagagtaccagtacaccgtaatttgcaggtgtactgtagaagttcccttatttt 24098283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 84
Target Start/End: Original strand, 6532912 - 6532973
Alignment:
Q  23 tgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtac 84  Q
    |||||||||| |||||||||||||||||||||||| || ||||||||||||| ||| |||||    
T  6532912 tgatagttaaattataaaaattgtaagcgagagtatcgatacaccgtaatttgcggatgtac 6532973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 15 - 66
Target Start/End: Complemental strand, 6318367 - 6318317
Alignment:
Q  15 taaaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacac 66  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  6318367 taaaaaatt-atagttaatttataaaaattgtaagcgagagtaccgctacac 6318317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 13091240 - 13091315
Alignment:
Q  18 aaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    |||| ||||||||||||||||||  ||  |||  |||||||||||||||| ||||||||||||||||| |||||||    
T  13091240 aaaaatgatagttaatttataaatttttgaagtaagagtaccggtacaccttaatttacgggtgtaccgtagaagt 13091315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 6113853 - 6113808
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggt 62  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||    
T  6113853 aaaaaatgatagttaatttataaaaattataagcgagagtaccggt 6113808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 2029679 - 2029724
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggt 62  Q
    ||||| ||| |||||| |||||||||||||||||||||||| ||||    
T  2029679 aaaaaatgacagttaaattataaaaattgtaagcgagagtatcggt 2029724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 3e-32; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 17 - 99
Target Start/End: Complemental strand, 42427648 - 42427566
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagtccccat 99  Q
    ||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  42427648 aaaaaatgatagttaatttataaaaattgtaagcaagagtatcggtacaccgtaatttacgggtgtaccatagaagtccccat 42427566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 14 - 99
Target Start/End: Complemental strand, 3383274 - 3383189
Alignment:
Q  14 ataaaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagtccccat 99  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| ||||||| |||||    
T  3383274 ataaaaaaatgatagttaatttataaaaattgtaagtgagagtaccggtacaccgtaatttacggatgtaccgtagaagttcccat 3383189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 92
Target Start/End: Complemental strand, 15771389 - 15771314
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaag 92  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||    
T  15771389 aaaaaatgatagttaatttataaaaattataagcgagagtaccggtacaccttaatttacgggtgtaccgtagaag 15771314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 4673681 - 4673605
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| | |||||||| |||||||    
T  4673681 aaaaaatgatagttaatttataaaaattgtaagcgagagtaccggtacaccttaatttgcaggtgtaccttagaagt 4673605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 91
Target Start/End: Complemental strand, 11813272 - 11813198
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaa 91  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||| |||||    
T  11813272 aaaaaatgatagttaatttataaaaattgtaagcgagagtaccggtacaccttaatttgtgggtgtaccgtagaa 11813198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 33423113 - 33423048
Alignment:
Q  18 aaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgta 83  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  33423113 aaaaatgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttgcggatgta 33423048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 14532904 - 14532828
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    ||||| |||||||||| |||||||||||||||||||||||| || ||||||||||||| |||||||||| |||||||    
T  14532904 aaaaaatgatagttaaattataaaaattgtaagcgagagtatcgatacaccgtaatttgcgggtgtaccgtagaagt 14532828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 37083537 - 37083613
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||| ||| |||||| |||||||    
T  37083537 aaaaaatgatagttaatttataaaaattgtaagcgagagtaccgatacaccttaatttgcggatgtaccgtagaagt 37083613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 6884488 - 6884547
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttac 76  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  6884488 aaaaaatgatagttaatttataaaaattgtaagcgagagtaccggtacaccttaatttac 6884547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 93
Target Start/End: Complemental strand, 5389281 - 5389206
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    ||||| ||||||||||||||||||||| |||||||||||| |||||||||| |||||| |||||||||| |||||||    
T  5389281 aaaaaatgatagttaatttataaaaat-gtaagcgagagtgccggtacaccttaatttgcgggtgtaccgtagaagt 5389206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 93
Target Start/End: Original strand, 34665905 - 34665972
Alignment:
Q  25 atagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||| |||||||    
T  34665905 atagttaatttataaaaat-gtaagcgagagtaccggtacaccttaatttgcgggtgtaccgtagaagt 34665972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 93
Target Start/End: Original strand, 1353831 - 1353908
Alignment:
Q  14 ataaaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    |||||||||| ||||||||||||||||||| |||||||||||||| |||||||| |||||| |||||||||| |||||||    
T  1353831 ataaaaaatt-atagttaatttataaaaat-gtaagcgagagtactggtacaccttaatttgcgggtgtaccgtagaagt 1353908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 14 - 98
Target Start/End: Original strand, 59242 - 59326
Alignment:
Q  14 ataaaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgt-aatttacgggtgtaccatagaagtcccca 98  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||| | | ||||| | |||||||| ||||||| ||||    
T  59242 ataaaaaatt-atagttaatttataaaaattgtaagcgagagtaccggtacatcataaatttgcaggtgtaccgtagaagttccca 59326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 3810522 - 3810473
Alignment:
Q  25 atagttaatttataaaaattgtaagcgagagtaccggtacaccgtaattt 74  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  3810522 atagttaatttataaaaattgtaagcgaaagtaccggtacaccttaattt 3810473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 38963147 - 38963071
Alignment:
Q  16 aaaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||| |||| |||||| | |||||| | |||||||    
T  38963147 aaaaaaatgatagttaatttataaaaat-gtaagcgagagtaccggtgcaccttaatttgcaggtgtaacgtagaagt 38963071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 11227954 - 11228029
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    ||||| ||||||||||||||||||||| |||||||||||||| | |||||| |||||| | |||||||| |||||||    
T  11227954 aaaaaatgatagttaatttataaaaat-gtaagcgagagtactgatacaccttaatttgcaggtgtaccgtagaagt 11228029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 93
Target Start/End: Complemental strand, 34438226 - 34438191
Alignment:
Q  58 ccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    |||||||||| |||||||||||||||||||||||||    
T  34438226 ccggtacaccttaatttacgggtgtaccatagaagt 34438191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 93
Target Start/End: Original strand, 33413068 - 33413108
Alignment:
Q  53 gagtaccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    ||||||||||||||| |||||||| |||||||| |||||||    
T  33413068 gagtaccggtacaccttaatttacaggtgtaccgtagaagt 33413108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 93
Target Start/End: Original strand, 37909720 - 37909760
Alignment:
Q  53 gagtaccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    ||||||||||||||| |||||| |||||||||| |||||||    
T  37909720 gagtaccggtacaccttaatttgcgggtgtaccgtagaagt 37909760  T

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Target: scaffold0077 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 48336 - 48411
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||| || |||||||||| |||||||    
T  48336 aaaaaatgatagttaatttataaaaat-gtaagcgagagtaccggtacaccttaaattgcgggtgtaccgtagaagt 48411  T

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Target: scaffold0005 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 36688 - 36643
Alignment:
Q  17 aaaaattgatagttaatttataaaaattgtaagcgagagtaccggt 62  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||    
T  36688 aaaaaatgatagttaatttataaaaattgtaagcgagagtaccggt 36643  T

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Target: scaffold0283 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0283
Description:

Target: scaffold0283; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 93
Target Start/End: Original strand, 6580 - 6640
Alignment:
Q  32 atttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    |||||||||||| |||| |||||||||||||||||| ||| || |||||||||| |||||||    
T  6580 atttataaaaat-gtaaccgagagtaccggtacaccttaaattgcgggtgtaccgtagaagt 6640  T

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Target: scaffold0008 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 45400 - 45465
Alignment:
Q  18 aaaattgatagttaatttataaaaattgtaagcgagagtaccggtacaccgtaatttacgggtgta 83  Q
    ||||||||| ||||||||||| |  | |||||  |||||||||||||||| ||||||||| |||||    
T  45400 aaaattgatcgttaatttatagatttagtaagtaagagtaccggtacaccataatttacgagtgta 45465  T

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Target: scaffold0625 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0625
Description:

Target: scaffold0625; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 93
Target Start/End: Complemental strand, 6310 - 6270
Alignment:
Q  53 gagtaccggtacaccgtaatttacgggtgtaccatagaagt 93  Q
    ||||||||||||||| |||||| |||||||||| |||||||    
T  6310 gagtaccggtacaccttaatttgcgggtgtaccgtagaagt 6270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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