View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19360_high_36 (Length: 227)
Name: NF19360_high_36
Description: NF19360
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19360_high_36 |
 | |
|
| [»] chr6 (31 HSPs) |
| |
|
| [»] chr3 (1 HSPs) |
| |
|
| [»] chr5 (2 HSPs) |
| |
|
| [»] chr8 (3 HSPs) |
| |
|
| [»] scaffold0477 (1 HSPs) |
| |
|
| [»] scaffold0288 (1 HSPs) |
| |
|
| [»] chr7 (1 HSPs) |
| |
|
| [»] scaffold0475 (1 HSPs) |
| | |
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Alignment Details
Target: chr6 (Bit Score: 208; Significance: 1e-114; HSPs: 31)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 16 - 227
Target Start/End: Original strand, 4574559 - 4574770
Alignment:
| Q |
16 |
atggccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtggttcaatac |
115 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4574559 |
atggccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtggttcaatac |
4574658 |
T |
|
| Q |
116 |
tttctcttgtggacaccaacttgctattagtcctctatctgaaatttctttcaaaaaatcagatgagaaaaccaccgagccgccaatgacaagatcaggc |
215 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
4574659 |
tttctcttgtggacaccaacttgctattagtcctctatctgaaatttctttcaaaaaatcagatgagaaaaccaccgagccaccaatgacaagatcaggc |
4574758 |
T |
|
| Q |
216 |
ctaatgatccac |
227 |
Q |
| |
|
|||||||||||| |
|
|
| T |
4574759 |
ctaatgatccac |
4574770 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 16 - 226
Target Start/End: Original strand, 4560757 - 4560966
Alignment:
| Q |
16 |
atggccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtggttcaatac |
115 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
4560757 |
atggccaacacaacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgatgggtggttcaatac |
4560856 |
T |
|
| Q |
116 |
tttctcttgtggacaccaacttgctattagtcctctatctgaaatttctttcaaaaaatcagatgagaaaaccaccgagccgccaatgacaagatcaggc |
215 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
4560857 |
tttctcttgtggacaccaacttgctattagtcctctatctgaaatttctttc-aaaaatcagatgagaaaaccaccgagccaccaatgacaagatcaggc |
4560955 |
T |
|
| Q |
216 |
ctaatgatcca |
226 |
Q |
| |
|
||||||||||| |
|
|
| T |
4560956 |
ctaatgatcca |
4560966 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 16 - 227
Target Start/End: Complemental strand, 4267047 - 4266836
Alignment:
| Q |
16 |
atggccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtggttcaatac |
115 |
Q |
| |
|
|||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||| |||||||||| || |
|
|
| T |
4267047 |
atggccaacacaacattggcactccagcacatatgctttcagtggttgaattccatccgcaatgagtcaagaatccaccaatcgaagggtggttcaacac |
4266948 |
T |
|
| Q |
116 |
tttctcttgtggacaccaacttgctattagtcctctatctgaaatttctttcaaaaaatcagatgagaaaaccaccgagccgccaatgacaagatcaggc |
215 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| || ||||| |||||||||||||||||| |
|
|
| T |
4266947 |
tttatcttgtggacaccaacttgctattagtcctctatctgaaatttctttaaaaaaatcagatgacaaaacaactgagcccccaatgacaagatcaggc |
4266848 |
T |
|
| Q |
216 |
ctaatgatccac |
227 |
Q |
| |
|
||||| |||||| |
|
|
| T |
4266847 |
ctaattatccac |
4266836 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 16 - 227
Target Start/End: Original strand, 4563962 - 4564173
Alignment:
| Q |
16 |
atggccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtggttcaatac |
115 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | |||| ||||||||||||| |
|
|
| T |
4563962 |
atggccaacacaacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccgccaattgaagggtggttcaatac |
4564061 |
T |
|
| Q |
116 |
tttctcttgtggacaccaacttgctattagtcctctatctgaaatttctttcaaaaaatcagatgagaaaaccaccgagccgccaatgacaagatcaggc |
215 |
Q |
| |
|
|||||| ||||||||||||||||| |||| ||||||||||||||||| |||| ||| |||||||| ||||| || ||||| ||||||||||| |||||| |
|
|
| T |
4564062 |
tttctcctgtggacaccaacttgcaattaagcctctatctgaaatttcattcacaaactcagatgacaaaacgactgagccaccaatgacaaggtcaggc |
4564161 |
T |
|
| Q |
216 |
ctaatgatccac |
227 |
Q |
| |
|
|||||||||||| |
|
|
| T |
4564162 |
ctaatgatccac |
4564173 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 16 - 227
Target Start/End: Original strand, 4480944 - 4481155
Alignment:
| Q |
16 |
atggccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtggttcaatac |
115 |
Q |
| |
|
|||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||||| || |
|
|
| T |
4480944 |
atggccaacacaacattggcactccagcacatacactttcagtggttgagttccatccgcaatgagtcaagaatccgccgattgaagggtggttcaaaac |
4481043 |
T |
|
| Q |
116 |
tttctcttgtggacaccaacttgctattagtcctctatctgaaatttctttcaaaaaatcagatgagaaaaccaccgagccgccaatgacaagatcaggc |
215 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||| |||||||||||||||| | |||||||| || ||||| ||||| ||||||||||||| || | |
|
|
| T |
4481044 |
tttctcttgtggacaccaacttgctattaggcctctatttgaaatttctttcaaatactcagatgacaacaccactgagccaccaatgacaagattagac |
4481143 |
T |
|
| Q |
216 |
ctaatgatccac |
227 |
Q |
| |
|
||||| |||||| |
|
|
| T |
4481144 |
ctaataatccac |
4481155 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 18 - 227
Target Start/End: Original strand, 4602042 - 4602251
Alignment:
| Q |
18 |
ggccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtggttcaatactt |
117 |
Q |
| |
|
|||||||| ||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| ||| |||||||||| |||| |
|
|
| T |
4602042 |
ggccaacacaacatcggcactccagcacatatgctttcagtggttgagttccatccacaatgagtcaagaatccgccgatcgaagggtggttcaacactt |
4602141 |
T |
|
| Q |
118 |
tctcttgtggacaccaacttgctattagtcctctatctgaaatttctttcaaaaaatcagatgagaaaaccaccgagccgccaatgacaagatcaggcct |
217 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||| || ||| |||||||| |||| ||| ||||| |||||||||||||||||||| |
|
|
| T |
4602142 |
tctcttgtggacaccaacttgctattaggcctctatctgaaatttcatttgtaaactcagatgacaaaatcactgagccaccaatgacaagatcaggcct |
4602241 |
T |
|
| Q |
218 |
aatgatccac |
227 |
Q |
| |
|
|||||||||| |
|
|
| T |
4602242 |
aatgatccac |
4602251 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 16 - 227
Target Start/End: Complemental strand, 4490236 - 4490025
Alignment:
| Q |
16 |
atggccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtggttcaatac |
115 |
Q |
| |
|
|||||||||| |||||||| |||||||||||||| || || || ||||||||||||| |||||||||||||||||||| | |||| |||| |||||||| |
|
|
| T |
4490236 |
atggccaacacaacattggcactccagcacatatactctccatgattgagttccatccacaatgagtcaagaatccaccaattgaagggtgattcaatac |
4490137 |
T |
|
| Q |
116 |
tttctcttgtggacaccaacttgctattagtcctctatctgaaatttctttcaaaaaatcagatgagaaaaccaccgagccgccaatgacaagatcaggc |
215 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||| ||||| |||||||||||| |
|
|
| T |
4490136 |
cttctcttgtggacaccaacttgctattagtcctctatctgaaatttctttcaaaaaatcagatgacaacacctgtgagccaccaataacaagatcaggc |
4490037 |
T |
|
| Q |
216 |
ctaatgatccac |
227 |
Q |
| |
|
|||||||||||| |
|
|
| T |
4490036 |
ctaatgatccac |
4490025 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 19 - 226
Target Start/End: Complemental strand, 4514999 - 4514792
Alignment:
| Q |
19 |
gccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtggttcaatacttt |
118 |
Q |
| |
|
||||||| | |||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||||| || | |||| |||||||||| ||||| |
|
|
| T |
4514999 |
gccaacaaagcattggcactccagcgcatatgctctcagtggttgagttccatccgcaatgagtcaagaatccgccaattgaagggtggttcaaaacttt |
4514900 |
T |
|
| Q |
119 |
ctcttgtggacaccaacttgctattagtcctctatctgaaatttctttcaaaaaatcagatgagaaaaccaccgagccgccaatgacaagatcaggccta |
218 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||| |||||| |||| ||| ||||| || |||||||| ||||| ||||||||||||||||||||| |
|
|
| T |
4514899 |
ctcttgtggacaccaacttgctattaggcctctatctgcaatttcattcacaaactcagacgacaaaaccactgagccaccaatgacaagatcaggccta |
4514800 |
T |
|
| Q |
219 |
atgatcca |
226 |
Q |
| |
|
|||||||| |
|
|
| T |
4514799 |
atgatcca |
4514792 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 16 - 226
Target Start/End: Original strand, 4461374 - 4461584
Alignment:
| Q |
16 |
atggccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtggttcaatac |
115 |
Q |
| |
|
|||||||||| ||||| || ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| | |||| ||||||||| ||| |
|
|
| T |
4461374 |
atggccaacacaacatcggcactccagcacatatgctttcagtggttgaattccatccacaatgagtcaagaatccaccaattgaagggtggttcagtac |
4461473 |
T |
|
| Q |
116 |
tttctcttgtggacaccaacttgctattagtcctctatctgaaatttctttcaaaaaatcagatgagaaaaccaccgagccgccaatgacaagatcaggc |
215 |
Q |
| |
|
|| |||||| |||||||| ||||||||||| ||||||||||||||||| |||| ||| |||||||| |||| | ||||||||||||||||||||||||| |
|
|
| T |
4461474 |
ttgctcttgcggacaccagcttgctattaggcctctatctgaaatttcattcacaaactcagatgacaaaataaacgagccgccaatgacaagatcaggc |
4461573 |
T |
|
| Q |
216 |
ctaatgatcca |
226 |
Q |
| |
|
||||||||||| |
|
|
| T |
4461574 |
ctaatgatcca |
4461584 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 16 - 227
Target Start/End: Complemental strand, 4613599 - 4613388
Alignment:
| Q |
16 |
atggccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtggttcaatac |
115 |
Q |
| |
|
|||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || | |||| ||||||| ||||| |
|
|
| T |
4613599 |
atggccaacacaacattggcactccagcacatatgctttcagtggttgagttccatccacaatgagtcaagaatccgccaattgaagggtggtttaatac |
4613500 |
T |
|
| Q |
116 |
tttctcttgtggacaccaacttgctattagtcctctatctgaaatttctttcaaaaaatcagatgagaaaaccaccgagccgccaatgacaagatcaggc |
215 |
Q |
| |
|
|| |||||| |||||||| || || ||||| ||||||||||||||||| |||| ||| || ||||| ||||| || |||||||||||||||||||||||| |
|
|
| T |
4613499 |
ttgctcttgaggacaccagctcgcgattaggcctctatctgaaatttcattcacaaactctgatgacaaaacaactgagccgccaatgacaagatcaggc |
4613400 |
T |
|
| Q |
216 |
ctaatgatccac |
227 |
Q |
| |
|
|||||||||||| |
|
|
| T |
4613399 |
ctaatgatccac |
4613388 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 16 - 227
Target Start/End: Original strand, 4617273 - 4617484
Alignment:
| Q |
16 |
atggccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtggttcaatac |
115 |
Q |
| |
|
|||||||||| |||||||| |||||||| ||||| |||||||||||||| |||||||||||||||||||||||||| |||| |||| |||||||||| || |
|
|
| T |
4617273 |
atggccaacacaacattggcactccagcgcatatactttcagtggttgaattccatccgcaatgagtcaagaatcctccgattgaagggtggttcaacac |
4617372 |
T |
|
| Q |
116 |
tttctcttgtggacaccaacttgctattagtcctctatctgaaatttctttcaaaaaatcagatgagaaaaccaccgagccgccaatgacaagatcaggc |
215 |
Q |
| |
|
||| |||||||||||||||||||||||||| |||||||||| |||||| || ||| ||||||||||||| ||| ||||| |||||||||||||||||| |
|
|
| T |
4617373 |
tttgtcttgtggacaccaacttgctattaggcctctatctgcaatttcatttgtaaactcagatgagaaaatcactgagccaccaatgacaagatcaggc |
4617472 |
T |
|
| Q |
216 |
ctaatgatccac |
227 |
Q |
| |
|
|| ||||||||| |
|
|
| T |
4617473 |
cttatgatccac |
4617484 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 16 - 227
Target Start/End: Original strand, 4470054 - 4470265
Alignment:
| Q |
16 |
atggccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtggttcaatac |
115 |
Q |
| |
|
|||||||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||| |
|
|
| T |
4470054 |
atggccaacacaacattggcactccagcgcatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgattgaagggtggttcagtac |
4470153 |
T |
|
| Q |
116 |
tttctcttgtggacaccaacttgctattagtcctctatctgaaatttctttcaaaaaatcagatgagaaaaccaccgagccgccaatgacaagatcaggc |
215 |
Q |
| |
|
|| |||||| |||||||| | | ||||| ||||||||||||||| | || | || || ||||||||||| ||||||||||||||||||||||| ||| |
|
|
| T |
4470154 |
ttgctcttgaggacaccagttcacgattaggcctctatctgaaattccatttacaatctctgatgagaaaactaccgagccgccaatgacaagatcgggc |
4470253 |
T |
|
| Q |
216 |
ctaatgatccac |
227 |
Q |
| |
|
|||||||||||| |
|
|
| T |
4470254 |
ctaatgatccac |
4470265 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 16 - 227
Target Start/End: Original strand, 4579683 - 4579894
Alignment:
| Q |
16 |
atggccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtggttcaatac |
115 |
Q |
| |
|
|||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| | |||| ||||||||| ||| |
|
|
| T |
4579683 |
atggccaacacaacattggaactccagcagatatgctttcagtgattgagttccatccgcaatgagtcaagaatccaccaattgaagggtggttcagtac |
4579782 |
T |
|
| Q |
116 |
tttctcttgtggacaccaacttgctattagtcctctatctgaaatttctttcaaaaaatcagatgagaaaaccaccgagccgccaatgacaagatcaggc |
215 |
Q |
| |
|
|| |||||| |||||||| || | |||||| ||||||||||||||||| |||| ||| || ||||| ||||| | |||||||| ||||||||||| ||| |
|
|
| T |
4579783 |
ttgctcttgcggacaccagctcgttattaggcctctatctgaaatttcattcacaaactccgatgacaaaacagctgagccgccgatgacaagatcgggc |
4579882 |
T |
|
| Q |
216 |
ctaatgatccac |
227 |
Q |
| |
|
|||||||||||| |
|
|
| T |
4579883 |
ctaatgatccac |
4579894 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 16 - 227
Target Start/End: Original strand, 3171992 - 3172203
Alignment:
| Q |
16 |
atggccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtggttcaatac |
115 |
Q |
| |
|
|||||| ||| |||||||| | ||||||||||| ||||| |||||||||||||||||||| |||||||||||||| || | |||| | |||||||| || |
|
|
| T |
3171992 |
atggcctacacaacattggcattccagcacatacactttccgtggttgagttccatccgcagtgagtcaagaatccgccaattgaaggatggttcaacac |
3172091 |
T |
|
| Q |
116 |
tttctcttgtggacaccaacttgctattagtcctctatctgaaatttctttcaaaaaatcagatgagaaaaccaccgagccgccaatgacaagatcaggc |
215 |
Q |
| |
|
||||||||| |||||||||||||||||||| ||||||||||||||||| |||| ||| || ||||| ||||| |||||||| |||||||||||||||||| |
|
|
| T |
3172092 |
tttctcttgcggacaccaacttgctattaggcctctatctgaaatttcattcacaaactccgatgacaaaacaaccgagccaccaatgacaagatcaggc |
3172191 |
T |
|
| Q |
216 |
ctaatgatccac |
227 |
Q |
| |
|
||||| |||||| |
|
|
| T |
3172192 |
ctaataatccac |
3172203 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 16 - 227
Target Start/End: Original strand, 4457845 - 4458056
Alignment:
| Q |
16 |
atggccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtggttcaatac |
115 |
Q |
| |
|
||||||||| | |||||| |||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||| |||| |||| |||||||||| || |
|
|
| T |
4457845 |
atggccaacgcagcattggcactccagcgcatatgctttcagtggttgagtttcatccacaatgagtcaagaatcctccgattgaagggtggttcaacac |
4457944 |
T |
|
| Q |
116 |
tttctcttgtggacaccaacttgctattagtcctctatctgaaatttctttcaaaaaatcagatgagaaaaccaccgagccgccaatgacaagatcaggc |
215 |
Q |
| |
|
||| ||||||||||||||||||||||||| |||||||| ||| |||| |||| |||||| ||||| ||||| |||||||| |||||||||||||||||| |
|
|
| T |
4457945 |
tttatcttgtggacaccaacttgctattaagcctctatcagaagtttcattcacaaaatccgatgacaaaacaaccgagccaccaatgacaagatcaggc |
4458044 |
T |
|
| Q |
216 |
ctaatgatccac |
227 |
Q |
| |
|
||| | |||||| |
|
|
| T |
4458045 |
ctagttatccac |
4458056 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 16 - 226
Target Start/End: Original strand, 4585887 - 4586097
Alignment:
| Q |
16 |
atggccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtggttcaatac |
115 |
Q |
| |
|
|||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| | |||| ||||||||||||| |
|
|
| T |
4585887 |
atggccaacacaacattggcactccagcacatatgctttcagtggttgagttccatccacagtgagtcaagaatccaccaattgaagggtggttcaatac |
4585986 |
T |
|
| Q |
116 |
tttctcttgtggacaccaacttgctattagtcctctatctgaaatttctttcaaaaaatcagatgagaaaaccaccgagccgccaatgacaagatcaggc |
215 |
Q |
| |
|
|| |||||| || ||||||| || ||||| ||||||||||||||||| ||| ||| |||||||| ||||||| || || ||||||||||||||||| |
|
|
| T |
4585987 |
ttgctcttgcgggcaccaacccgcgattaggcctctatctgaaatttcattcttaaactcagatgacaaaaccaaggaaccaccaatgacaagatcaggt |
4586086 |
T |
|
| Q |
216 |
ctaatgatcca |
226 |
Q |
| |
|
||||||||||| |
|
|
| T |
4586087 |
ctaatgatcca |
4586097 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 16 - 227
Target Start/End: Complemental strand, 4504278 - 4504067
Alignment:
| Q |
16 |
atggccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtggttcaatac |
115 |
Q |
| |
|
|||||||||| |||||||| ||||||||||| | ||||||||||||||||||||||| ||||||||||||||||| |||| |||| |||||||||| || |
|
|
| T |
4504278 |
atggccaacacaacattggcactccagcacaaacactttcagtggttgagttccatccacaatgagtcaagaatcctccgattgaagggtggttcaacac |
4504179 |
T |
|
| Q |
116 |
tttctcttgtggacaccaacttgctattagtcctctatctgaaatttctttcaaaaaatcagatgagaaaaccaccgagccgccaatgacaagatcaggc |
215 |
Q |
| |
|
||| |||||||||||||||||||||| |||||||||| ||| |||| |||| |||||||||||| || ||| | ||||| ||||| |||||||||||| |
|
|
| T |
4504178 |
tttatcttgtggacaccaacttgctacaagtcctctattagaagtttcattcacaaaatcagatgacaacacctctgagccaccaataacaagatcaggc |
4504079 |
T |
|
| Q |
216 |
ctaatgatccac |
227 |
Q |
| |
|
||||| |||||| |
|
|
| T |
4504078 |
ctaataatccac |
4504067 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 16 - 227
Target Start/End: Original strand, 4592482 - 4592693
Alignment:
| Q |
16 |
atggccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtggttcaatac |
115 |
Q |
| |
|
|||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| | |||| ||||||| ||||| |
|
|
| T |
4592482 |
atggccaacacaacattggaattccagcacatatactttcagtggttgagttccatccacaatgagtcaagaatccaccaattgaagggtggtttaatac |
4592581 |
T |
|
| Q |
116 |
tttctcttgtggacaccaacttgctattagtcctctatctgaaatttctttcaaaaaatcagatgagaaaaccaccgagccgccaatgacaagatcaggc |
215 |
Q |
| |
|
|| |||||| |||||||| || || |||| ||||||||||||||||| |||| ||| || ||||| ||||| | | ||| |||||||||||||||||| |
|
|
| T |
4592582 |
ttgctcttgaggacaccagctcgcgattacgcctctatctgaaatttcattcacaaactccgatgacaaaacaattgtgccaccaatgacaagatcaggc |
4592681 |
T |
|
| Q |
216 |
ctaatgatccac |
227 |
Q |
| |
|
|||||||||||| |
|
|
| T |
4592682 |
ctaatgatccac |
4592693 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 21 - 227
Target Start/End: Original strand, 4598427 - 4598633
Alignment:
| Q |
21 |
caacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtggttcaatactttct |
120 |
Q |
| |
|
||||| |||||||| ||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||| | |||| | ||||| ||||||| || |
|
|
| T |
4598427 |
caacacaacattggcactccggcacatatactttcagtggttgagttccatccgcaatgagttaagaatccaccaattgaaggatggtttaatacttgct |
4598526 |
T |
|
| Q |
121 |
cttgtggacaccaacttgctattagtcctctatctgaaatttctttcaaaaaatcagatgagaaaaccaccgagccgccaatgacaagatcaggcctaat |
220 |
Q |
| |
|
|||| ||||||| ||||| | || ||||||||||||||||| |||| ||| || ||||| ||||| |||||||| ||||||||||||||||||||||| |
|
|
| T |
4598527 |
cttgcagacaccagcttgcaactaagcctctatctgaaatttcattcacaaactccgatgacaaaacaaccgagccaccaatgacaagatcaggcctaat |
4598626 |
T |
|
| Q |
221 |
gatccac |
227 |
Q |
| |
|
||||||| |
|
|
| T |
4598627 |
gatccac |
4598633 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 18 - 227
Target Start/End: Original strand, 4506110 - 4506319
Alignment:
| Q |
18 |
ggccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtggttcaatactt |
117 |
Q |
| |
|
|||||||| | |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||| || || |||| |
|
|
| T |
4506110 |
ggccaacacagcattggcactccagcgcatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccaattgaagggtgatttaacactt |
4506209 |
T |
|
| Q |
118 |
tctcttgtggacaccaacttgctattagtcctctatctgaaatttctttcaaaaaatcagatgagaaaaccaccgagccgccaatgacaagatcaggcct |
217 |
Q |
| |
|
||||||||| |||||| |||||||| || | ||||||||||||||| || ||| || || || |||||||| ||||| ||||| |||||||||||||| |
|
|
| T |
4506210 |
tctcttgtgaacaccagcttgctataaggcttctatctgaaatttcatttgcaaactctgaagacaaaaccactgagccaccaattacaagatcaggcct |
4506309 |
T |
|
| Q |
218 |
aatgatccac |
227 |
Q |
| |
|
|||||||||| |
|
|
| T |
4506310 |
aatgatccac |
4506319 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 16 - 227
Target Start/End: Original strand, 4557376 - 4557587
Alignment:
| Q |
16 |
atggccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtggttcaatac |
115 |
Q |
| |
|
|||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| | |||| | ||||| ||||| |
|
|
| T |
4557376 |
atggccaacacaacattggaactccagcagatatgctttcagtggttgagttccatccacaatgagtcaagaatccaccaattgaaggatggtttaatac |
4557475 |
T |
|
| Q |
116 |
tttctcttgtggacaccaacttgctattagtcctctatctgaaatttctttcaaaaaatcagatgagaaaaccaccgagccgccaatgacaagatcaggc |
215 |
Q |
| |
|
|| |||||| || ||||| | || ||||| ||||||||||||||||| || | ||| || ||||| ||||| || ||||| || ||||||||||| ||| |
|
|
| T |
4557476 |
ttgctcttgcgggcaccagcccgcgattaggcctctatctgaaatttcattgacaaactccgatgacaaaacaactgagccaccgatgacaagatcgggc |
4557575 |
T |
|
| Q |
216 |
ctaatgatccac |
227 |
Q |
| |
|
|||||||||||| |
|
|
| T |
4557576 |
ctaatgatccac |
4557587 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 16 - 227
Target Start/End: Original strand, 4622393 - 4622604
Alignment:
| Q |
16 |
atggccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtggttcaatac |
115 |
Q |
| |
|
|||||||||| | ||||| ||||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||| | || | ||||||| | ||| |
|
|
| T |
4622393 |
atggccaacacagcattgaaactccagcacatatgctttcggtggttgaattccatccacaatgagtcaagaatccaccaattgcagggtggttaagtac |
4622492 |
T |
|
| Q |
116 |
tttctcttgtggacaccaacttgctattagtcctctatctgaaatttctttcaaaaaatcagatgagaaaaccaccgagccgccaatgacaagatcaggc |
215 |
Q |
| |
|
|| ||||||||||||||||| ||| ||||| |||||| |||||||||| ||| ||| |||||||| |||| | ||||||||| |||||||| |||||| |
|
|
| T |
4622493 |
ttcctcttgtggacaccaacctgcgattaggcctctacctgaaatttcattctcaaactcagatgacaaaataaacgagccgcccatgacaaggtcaggc |
4622592 |
T |
|
| Q |
216 |
ctaatgatccac |
227 |
Q |
| |
|
|||||||||||| |
|
|
| T |
4622593 |
ctaatgatccac |
4622604 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 17 - 227
Target Start/End: Original strand, 4626203 - 4626413
Alignment:
| Q |
17 |
tggccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtggttcaatact |
116 |
Q |
| |
|
||||||||| | ||||||||||||||| |||||||||||| |||||||||||||||| |||||||| ||||||||||| | |||| | ||||||| |||| |
|
|
| T |
4626203 |
tggccaacacagcattggaactccagcgcatatgctttcaatggttgagttccatccacaatgagttaagaatccaccaattgaaggatggttcagtact |
4626302 |
T |
|
| Q |
117 |
ttctcttgtggacaccaacttgctattagtcctctatctgaaatttctttcaaaaaatcagatgagaaaaccaccgagccgccaatgacaagatcaggcc |
216 |
Q |
| |
|
|||||||| |||||||| ||||| ||||| ||||||||||||||||| ||| ||| || ||||| ||| | ||||| ||||| ||||||||||||| |
|
|
| T |
4626303 |
ttctcttgcggacaccagcttgcgattaggcctctatctgaaatttcattctcaaactcggatgacgaaataaatgagccaccaatcacaagatcaggcc |
4626402 |
T |
|
| Q |
217 |
taatgatccac |
227 |
Q |
| |
|
||||||||||| |
|
|
| T |
4626403 |
taatgatccac |
4626413 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 16 - 227
Target Start/End: Original strand, 4571223 - 4571434
Alignment:
| Q |
16 |
atggccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtggttcaatac |
115 |
Q |
| |
|
||||| |||| |||||||||||||||| | |||||||||| || |||||||||||||| || ||||||||||| ||||| | |||| | ||||||||||| |
|
|
| T |
4571223 |
atggctaacacaacattggaactccagtagatatgctttcggtcgttgagttccatccacagtgagtcaagaaaccaccaattgaaggatggttcaatac |
4571322 |
T |
|
| Q |
116 |
tttctcttgtggacaccaacttgctattagtcctctatctgaaatttctttcaaaaaatcagatgagaaaaccaccgagccgccaatgacaagatcaggc |
215 |
Q |
| |
|
||||||||| | ||||||| || ||||| ||||||||||||||||| |||| ||| || ||||| ||||| || ||||| |||||||||||||| ||| |
|
|
| T |
4571323 |
tttctcttgcgagcaccaaccagcaattaggcctctatctgaaatttcattcacaaactccgatgacaaaacaactgagccaccaatgacaagatcgggc |
4571422 |
T |
|
| Q |
216 |
ctaatgatccac |
227 |
Q |
| |
|
|||||||||||| |
|
|
| T |
4571423 |
ctaatgatccac |
4571434 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 18 - 227
Target Start/End: Original strand, 4516574 - 4516783
Alignment:
| Q |
18 |
ggccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtggttcaatactt |
117 |
Q |
| |
|
|||||||| |||||||| ||||| ||||| |||||||| | || ||||||||||| ||||||||||||||||| || |||||| | |||||||| |||| |
|
|
| T |
4516574 |
ggccaacacaacattggtactccggcacagatgctttccattgtggagttccatccacaatgagtcaagaatcctccaactgaaggatggttcaacactt |
4516673 |
T |
|
| Q |
118 |
tctcttgtggacaccaacttgctattagtcctctatctgaaatttctttcaaaaaatcagatgagaaaaccaccgagccgccaatgacaagatcaggcct |
217 |
Q |
| |
|
||||||| |||||||| |||||||||| |||||||| ||| |||| |||| |||||| ||||| |||| |||||||| ||||||||||| |||||||| |
|
|
| T |
4516674 |
tctcttgcggacaccagcttgctattacgcctctatccgaagtttcattcacaaaatcggatgacaaaataaccgagccaccaatgacaaggtcaggcct |
4516773 |
T |
|
| Q |
218 |
aatgatccac |
227 |
Q |
| |
|
||| |||||| |
|
|
| T |
4516774 |
aataatccac |
4516783 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 16 - 159
Target Start/End: Complemental strand, 4256492 - 4256349
Alignment:
| Q |
16 |
atggccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtggttcaatac |
115 |
Q |
| |
|
|||||||||| |||||||||||||| ||||| ||||||||| |||||||||||||||| |||||||||||||||||||| |||||| |||||||| ||| |
|
|
| T |
4256492 |
atggccaacacaacattggaactccggcacaaatgctttcaatggttgagttccatcctcaatgagtcaagaatccaccaactgaagagtggttcagtac |
4256393 |
T |
|
| Q |
116 |
tttctcttgtggacaccaacttgctattagtcctctatctgaaa |
159 |
Q |
| |
|
|| |||||| ||||||||||| | |||||||||||||| |||| |
|
|
| T |
4256392 |
ttgctcttgcggacaccaactctcgattagtcctctatccgaaa |
4256349 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 16 - 227
Target Start/End: Complemental strand, 4260035 - 4259824
Alignment:
| Q |
16 |
atggccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtggttcaatac |
115 |
Q |
| |
|
|||||||||| |||||||||||| | ||||| ||||||||| ||||||||||||||||||||||||| ||||||||||| |||||| |||||||| ||| |
|
|
| T |
4260035 |
atggccaacacaacattggaacttcggcacaaatgctttcaatggttgagttccatccgcaatgagttaagaatccaccaactgaagagtggttcagtac |
4259936 |
T |
|
| Q |
116 |
tttctcttgtggacaccaacttgctattagtcctctatctgaaatttctttcaaaaaatcagatgagaaaaccaccgagccgccaatgacaagatcaggc |
215 |
Q |
| |
|
|| |||||| |||||||| || || ||||| |||||||| |||||||| || ||| |||||||| |||| | ||||| ||||| | || |||||| |
|
|
| T |
4259935 |
ttgctcttgcggacaccagctcgcgattaggcctctatccgaaatttcactctcaaactcagatgacaaaataaaggagccaccaataatgaggtcaggc |
4259836 |
T |
|
| Q |
216 |
ctaatgatccac |
227 |
Q |
| |
|
|||||||||||| |
|
|
| T |
4259835 |
ctaatgatccac |
4259824 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 45 - 227
Target Start/End: Complemental strand, 4299673 - 4299491
Alignment:
| Q |
45 |
catatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtggttcaatactttctcttgtggacaccaacttgctatta |
144 |
Q |
| |
|
|||||||||||| |||||||||||||||| || ||||||||||||||||| | |||| ||||||||| ||||| |||||||||||| | ||||| ||| |
|
|
| T |
4299673 |
catatgctttcaatggttgagttccatccacagtgagtcaagaatccaccaattgaagggtggttcagtacttgttcttgtggacactagcttgcggtta |
4299574 |
T |
|
| Q |
145 |
gtcctctatctgaaatttctttcaaaaaatcagatgagaaaaccaccgagccgccaatgacaagatcaggcctaatgatccac |
227 |
Q |
| |
|
| ||||||| ||||||||| ||| ||| |||||||| |||| | | |||||||||||||||| || ||||||||||||||| |
|
|
| T |
4299573 |
ggcctctatttgaaatttcattctcaaactcagatgacaaaataaacaagccgccaatgacaaggtctggcctaatgatccac |
4299491 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 18 - 227
Target Start/End: Original strand, 4568309 - 4568518
Alignment:
| Q |
18 |
ggccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtggttcaatactt |
117 |
Q |
| |
|
||||||||||||||||| |||| ||||| |||||||| || ||||||||||| |||||||||||||||| || |||||| |||||||||| |||| |
|
|
| T |
4568309 |
ggccaacataacattggtactctggcacaaatgctttccaatgtggagttccatccacaatgagtcaagaatcgtccaactgaagggtggttcaacactt |
4568408 |
T |
|
| Q |
118 |
tctcttgtggacaccaacttgctattagtcctctatctgaaatttctttcaaaaaatcagatgagaaaaccaccgagccgccaatgacaagatcaggcct |
217 |
Q |
| |
|
|||||| |||||||| ||||||||| | |||||||| ||| || | |||| ||| || ||||| |||| || ||||| ||||||||||| | |||||| |
|
|
| T |
4568409 |
gctcttgcggacaccagcttgctatttggcctctatccgaagttccattcacaaactcggatgacaaaataactgagccaccaatgacaagctaaggcct |
4568508 |
T |
|
| Q |
218 |
aatgatccac |
227 |
Q |
| |
|
|||||||||| |
|
|
| T |
4568509 |
aatgatccac |
4568518 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 18 - 156
Target Start/End: Original strand, 4493208 - 4493346
Alignment:
| Q |
18 |
ggccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtggttcaatactt |
117 |
Q |
| |
|
|||||||| |||||||| ||||| ||||||||| ||| || |||||||||||||| |||||||||||||||||||| | ||| ||||||||| | || |
|
|
| T |
4493208 |
ggccaacacaacattggcactccggcacatatgtttttggtagttgagttccatccacaatgagtcaagaatccaccaatcgaatggtggttcagcagtt |
4493307 |
T |
|
| Q |
118 |
tctcttgtggacaccaacttgctattagtcctctatctg |
156 |
Q |
| |
|
||||||||||||||||||| || ||||| |||||||||| |
|
|
| T |
4493308 |
tctcttgtggacaccaactagcaattaggcctctatctg |
4493346 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 28 - 139
Target Start/End: Complemental strand, 4391996 - 4391885
Alignment:
| Q |
28 |
acattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtggttcaatactttctcttgtgg |
127 |
Q |
| |
|
|||||||||||| || ||| ||||||||| ||| |||||| ||||| ||||| || |||||||||| | | || ||||||||||||||| ||||| || |
|
|
| T |
4391996 |
acattggaactctagaacaaatgctttcaatgggtgagtttcatccacaatgcgttaagaatccacaaattcaagggtggttcaatacttgctctttcgg |
4391897 |
T |
|
| Q |
128 |
acaccaacttgc |
139 |
Q |
| |
|
|||||| ||||| |
|
|
| T |
4391896 |
acaccatcttgc |
4391885 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 156; Significance: 5e-83; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 16 - 227
Target Start/End: Original strand, 1281365 - 1281576
Alignment:
| Q |
16 |
atggccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtggttcaatac |
115 |
Q |
| |
|
|||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| || |
|
|
| T |
1281365 |
atggccaacacaacattggcactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgattgaagggtggttcaacac |
1281464 |
T |
|
| Q |
116 |
tttctcttgtggacaccaacttgctattagtcctctatctgaaatttctttcaaaaaatcagatgagaaaaccaccgagccgccaatgacaagatcaggc |
215 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||| |||||||| |||| ||| |||||||||||||||||||||||| |
|
|
| T |
1281465 |
tttctcttgtggacaccaacttgctattaggcctctatctgaaatttcattcgcaaagtcagatgacaaaatcactgagccgccaatgacaagatcaggc |
1281564 |
T |
|
| Q |
216 |
ctaatgatccac |
227 |
Q |
| |
|
||| |||||||| |
|
|
| T |
1281565 |
ctagtgatccac |
1281576 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 148; Significance: 3e-78; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 16 - 227
Target Start/End: Original strand, 24103250 - 24103461
Alignment:
| Q |
16 |
atggccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtggttcaatac |
115 |
Q |
| |
|
|||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||| || || |
|
|
| T |
24103250 |
atggccaacacaacattggcactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccaatcgaagggtggtttaacac |
24103349 |
T |
|
| Q |
116 |
tttctcttgtggacaccaacttgctattagtcctctatctgaaatttctttcaaaaaatcagatgagaaaaccaccgagccgccaatgacaagatcaggc |
215 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| ||||| || ||||| |||||||||||||||||| |
|
|
| T |
24103350 |
tttatcttgtggacaccaacttgctattagtcctctatctgaaacttctttaaaaaaatcagatgacaaaacaactgagcccccaatgacaagatcaggc |
24103449 |
T |
|
| Q |
216 |
ctaatgatccac |
227 |
Q |
| |
|
||||| |||||| |
|
|
| T |
24103450 |
ctaattatccac |
24103461 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 20 - 227
Target Start/End: Complemental strand, 27999976 - 27999769
Alignment:
| Q |
20 |
ccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtggttcaatactttc |
119 |
Q |
| |
|
|||||| |||||||| |||||||| ||||||||||| |||||||||||||||||||| ||||||||||| || | || |||| |||||||||| |||||| |
|
|
| T |
27999976 |
ccaacacaacattggcactccagcgcatatgctttcggtggttgagttccatccgcagtgagtcaagaacccgctgattgaagggtggttcaaaactttc |
27999877 |
T |
|
| Q |
120 |
tcttgtggacaccaacttgctattagtcctctatctgaaatttctttcaaaaaatcagatgagaaaaccaccgagccgccaatgacaagatcaggcctaa |
219 |
Q |
| |
|
||||||||||||||| ||| |||||| ||||||||||||||||||||| ||| |||||||| |||||||| ||||| ||||||||||||| ||||||| |
|
|
| T |
27999876 |
tcttgtggacaccaatttgatattaggcctctatctgaaatttctttcctaaactcagatgacaaaaccactgagccaccaatgacaagattaggcctag |
27999777 |
T |
|
| Q |
220 |
tgatccac |
227 |
Q |
| |
|
|||||||| |
|
|
| T |
27999776 |
tgatccac |
27999769 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 140; Significance: 2e-73; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 16 - 227
Target Start/End: Original strand, 1674477 - 1674688
Alignment:
| Q |
16 |
atggccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtggttcaatac |
115 |
Q |
| |
|
|||||||||| |||||||| |||||||| |||||||||||||||||||||||||||||||| || ||||||||||| |||| |||| |||||||||| || |
|
|
| T |
1674477 |
atggccaacacaacattggcactccagcgcatatgctttcagtggttgagttccatccgcagtgtgtcaagaatccgccgattgaagggtggttcaacac |
1674576 |
T |
|
| Q |
116 |
tttctcttgtggacaccaacttgctattagtcctctatctgaaatttctttcaaaaaatcagatgagaaaaccaccgagccgccaatgacaagatcaggc |
215 |
Q |
| |
|
||||||||||||||||||| ||| |||||| |||||||||||||||||||||| ||| |||||||| |||||||| ||||| |||||||||||||||||| |
|
|
| T |
1674577 |
tttctcttgtggacaccaatttgatattaggcctctatctgaaatttctttcataaactcagatgacaaaaccactgagccaccaatgacaagatcaggc |
1674676 |
T |
|
| Q |
216 |
ctaatgatccac |
227 |
Q |
| |
|
||| |||||||| |
|
|
| T |
1674677 |
ctagtgatccac |
1674688 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 16 - 227
Target Start/End: Complemental strand, 20863724 - 20863513
Alignment:
| Q |
16 |
atggccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtggttcaatac |
115 |
Q |
| |
|
||||||| || |||||||| ||||||||||||||||| ||| |||||||||||||||| |||||||| | |||||||| | |||| | |||||||| || |
|
|
| T |
20863724 |
atggccagcacaacattggcactccagcacatatgctctcaatggttgagttccatccacaatgagttagaaatccaccaattgaaggatggttcaacac |
20863625 |
T |
|
| Q |
116 |
tttctcttgtggacaccaacttgctattagtcctctatctgaaatttctttcaaaaaatcagatgagaaaaccaccgagccgccaatgacaagatcaggc |
215 |
Q |
| |
|
|||||||||||||||||||| || ||||| ||||||||||||||||| |||| ||| ||||||| |||| ||||||||| |||||||||||||||||| |
|
|
| T |
20863624 |
cttctcttgtggacaccaactcgcgattaggcctctatctgaaatttcattcacaaacgcagatgaaaaaatcaccgagccaccaatgacaagatcaggc |
20863525 |
T |
|
| Q |
216 |
ctaatgatccac |
227 |
Q |
| |
|
|||||||||||| |
|
|
| T |
20863524 |
ctaatgatccac |
20863513 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 16 - 226
Target Start/End: Complemental strand, 16686148 - 16685938
Alignment:
| Q |
16 |
atggccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtggttcaatac |
115 |
Q |
| |
|
|||||||||| |||||||||||||||||| |||| ||||||||||||||||||||||| |||||||| ||||||||||||| |||| | ||||| ||||| |
|
|
| T |
16686148 |
atggccaacacaacattggaactccagcatatatactttcagtggttgagttccatccacaatgagttaagaatccaccgattgaaggatggtttaatac |
16686049 |
T |
|
| Q |
116 |
tttctcttgtggacaccaacttgctattagtcctctatctgaaatttctttcaaaaaatcagatgagaaaaccaccgagccgccaatgacaagatcaggc |
215 |
Q |
| |
|
|| |||||| || ||||| || || ||||| | ||||||||| ||||| ||| ||| |||||||| |||||||| || |||| |||||||||||||| | |
|
|
| T |
16686048 |
ttgctcttgcgggcaccagctcgcgattaggcttctatctgagatttcattcttaaactcagatgacaaaaccacggaaccgcaaatgacaagatcagac |
16685949 |
T |
|
| Q |
216 |
ctaatgatcca |
226 |
Q |
| |
|
||||||||||| |
|
|
| T |
16685948 |
ctaatgatcca |
16685938 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0477 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0477
Description:
Target: scaffold0477; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 16 - 227
Target Start/End: Complemental strand, 4567 - 4356
Alignment:
| Q |
16 |
atggccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtggttcaatac |
115 |
Q |
| |
|
|||||||||| |||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| | |||| ||||||||| ||| |
|
|
| T |
4567 |
atggccaacacaacattggcactcctacacatatgctttcaatggttgagttccatccgcaatgagtcaagaatccaccaattgaagggtggttcagtac |
4468 |
T |
|
| Q |
116 |
tttctcttgtggacaccaacttgctattagtcctctatctgaaatttctttcaaaaaatcagatgagaaaaccaccgagccgccaatgacaagatcaggc |
215 |
Q |
| |
|
|| ||||||||||||||| || || ||||| ||||||||||||||||| ||| ||| |||||||| |||| | |||||||||||||||||| |||||| |
|
|
| T |
4467 |
ttgctcttgtggacaccagctcgcaattaggcctctatctgaaatttcattctcaaactcagatgacaaaataaacgagccgccaatgacaaggtcaggc |
4368 |
T |
|
| Q |
216 |
ctaatgatccac |
227 |
Q |
| |
|
|||||||||||| |
|
|
| T |
4367 |
ctaatgatccac |
4356 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0288 (Bit Score: 112; Significance: 9e-57; HSPs: 1)
Name: scaffold0288
Description:
Target: scaffold0288; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 16 - 227
Target Start/End: Complemental strand, 3600 - 3389
Alignment:
| Q |
16 |
atggccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtggttcaatac |
115 |
Q |
| |
|
|||||||||| | |||||| |||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||| | |||| ||||| ||| ||| |
|
|
| T |
3600 |
atggccaacaaagcattggtactccagcgcatatgctttcagtggttgaattccatccacaatgagtcaagaatccaccaattgaagggtggatcagtac |
3501 |
T |
|
| Q |
116 |
tttctcttgtggacaccaacttgctattagtcctctatctgaaatttctttcaaaaaatcagatgagaaaaccaccgagccgccaatgacaagatcaggc |
215 |
Q |
| |
|
|| ||||||||||||||| |||| ||||| ||||||||||||||||| ||| ||| || ||||| |||| | ||||||||||||||||||||||||| |
|
|
| T |
3500 |
ttgctcttgtggacaccagcttgtgattaggcctctatctgaaatttcattctcaaattctgatgacaaaataaacgagccgccaatgacaagatcaggc |
3401 |
T |
|
| Q |
216 |
ctaatgatccac |
227 |
Q |
| |
|
|||||||||||| |
|
|
| T |
3400 |
ctaatgatccac |
3389 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 104; Significance: 5e-52; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 16 - 227
Target Start/End: Original strand, 3086671 - 3086882
Alignment:
| Q |
16 |
atggccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtggttcaatac |
115 |
Q |
| |
|
|||||||||| |||||||| ||||||||| || ||||||| |||||||||||||| |||||||||||||||||||| | |||| |||| |||||||| |
|
|
| T |
3086671 |
atggccaacacaacattggcactccagcaagtacgctttcaaccgttgagttccatccacaatgagtcaagaatccaccaattgaagggtgattcaatac |
3086770 |
T |
|
| Q |
116 |
tttctcttgtggacaccaacttgctattagtcctctatctgaaatttctttcaaaaaatcagatgagaaaaccaccgagccgccaatgacaagatcaggc |
215 |
Q |
| |
|
|| |||||| |||||||| ||||| ||||| ||||||||||||||||||||| ||| |||||||| | || | |||||||||||||||||||||||| |
|
|
| T |
3086771 |
ttgctcttgcggacaccagcttgcgattagacctctatctgaaatttctttctcaaactcagatgacataataaaggagccgccaatgacaagatcaggc |
3086870 |
T |
|
| Q |
216 |
ctaatgatccac |
227 |
Q |
| |
|
|||||||||||| |
|
|
| T |
3086871 |
ctaatgatccac |
3086882 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0475 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0475
Description:
Target: scaffold0475; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 3565 - 3443
Alignment:
| Q |
16 |
atggccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtggttcaatac |
115 |
Q |
| |
|
||||||||| | |||||||||||||| ||| ||||||||| |||||||||||||||| |||||||| ||||||||||| ||| || |||||||||| || |
|
|
| T |
3565 |
atggccaacgcagcattggaactccagaacaaatgctttcaatggttgagttccatccacaatgagttaagaatccaccaact-aagggtggttcaacac |
3467 |
T |
|
| Q |
116 |
tttctcttgtggacaccaacttgc |
139 |
Q |
| |
|
|| ||||| |||||||| ||||| |
|
|
| T |
3466 |
ttgctcttacggacaccatcttgc |
3443 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 114 - 155
Target Start/End: Complemental strand, 1351098 - 1351057
Alignment:
| Q |
114 |
actttctcttgtggacaccaacttgctattagtcctctatct |
155 |
Q |
| |
|
|||||||||||||||||||||| | | ||||||||||||||| |
|
|
| T |
1351098 |
actttctcttgtggacaccaacctaccattagtcctctatct |
1351057 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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