View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19360_low_1 (Length: 557)
Name: NF19360_low_1
Description: NF19360
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19360_low_1 |
 | |
|
| [»] scaffold0971 (1 HSPs) |
| | |
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Alignment Details
Target: chr1 (Bit Score: 355; Significance: 0; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 355; E-Value: 0
Query Start/End: Original strand, 15 - 523
Target Start/End: Original strand, 28610677 - 28611199
Alignment:
| Q |
15 |
agattcaagacaaggaaggcattccaccggatcagcaacgattgatctttgcagggaagcagttggaagatggaagaactcttgcggattataatatcca |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28610677 |
agattcaagacaaggaaggcattccaccggatcagcaacgattgatctttgcagggaagcagttggaagatggaagaactcttgcggattataatatcca |
28610776 |
T |
|
| Q |
115 |
gaaagagagtacgcttcatctagttctgaggttgcgcggtgggatgcagatatttgtgaagacgttgaccgggaagacaattactctagaggtggagagt |
214 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28610777 |
gaaagagagtacgcttcatctagttctgaggttgcgcggtgggatgcagatatttgtgaagacgttgaccgggaagacaattactctagaggtggagagt |
28610876 |
T |
|
| Q |
215 |
tctgatactattgataacgtgaaggccaagattcaggataaggagggcattccaccggatcagcagcgattgatctttgctgggaaacaacttgaggatg |
314 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
28610877 |
tctgatactattgataacgtgaaggccaagattcaggataaggagggcattccaccggatcagcagcgattgatctttgctggaaaacaacttgaggatg |
28610976 |
T |
|
| Q |
315 |
gaaggactcttgctgattataatattcagaaagagtctacgcttcatctggttctcaggctccgtggtggt------gccgatgtttagatgatttagat |
408 |
Q |
| |
|
| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| | |||||||||||| ||| || |
|
|
| T |
28610977 |
ggaggactctcgctgattataatattcagaaagagtctacgcttcatcttgttctcaggctacgtggtggtggtggtgacgatgtttagat---ttaaat |
28611073 |
T |
|
| Q |
409 |
ccataagtttc-----------agtttctgtgnnnnnnnnnnnngttatgttctgctgcaatgattaaaagttgattaataaaagtttcaatttgatatt |
497 |
Q |
| |
|
||||||||||| |||||||||| || ||||||| ||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
28611074 |
ccataagtttctagttttttctagtttctgtgttgttttttcgatttgtgttctgttgcaatgattaaaagttcattaataaaagtttcaatttgatatt |
28611173 |
T |
|
| Q |
498 |
atcgtttagatttgggatattgtctt |
523 |
Q |
| |
|
|| ||||| |||| ||||||||||| |
|
|
| T |
28611174 |
attgtttaaatttatgatattgtctt |
28611199 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 20 - 369
Target Start/End: Original strand, 28610454 - 28610803
Alignment:
| Q |
20 |
caagacaaggaaggcattccaccggatcagcaacgattgatctttgcagggaagcagttggaagatggaagaactcttgcggattataatatccagaaag |
119 |
Q |
| |
|
|||||||| ||||| |||||||| || || ||||| | ||||| || || || ||| | ||||| || ||||||||||||||||| ||||||||||||| |
|
|
| T |
28610454 |
caagacaaagaaggaattccacctgaccaacaacgtctcatcttcgccggaaaacagctagaagacggtagaactcttgcggattacaatatccagaaag |
28610553 |
T |
|
| Q |
120 |
agagtacgcttcatctagttctgaggttgcgcggtgggatgcagatatttgtgaagacgttgaccgggaagacaattactctagaggtggagagttctga |
219 |
Q |
| |
|
|| |||||||| || ||||| | | || ||||| ||||| || ||||| || || | || ||||| || || || || || || || |||||| |
|
|
| T |
28610554 |
agtccacgcttcaccttgttctccgtctccgtggtggcatgcaaatctttgtcaaaaccctaacagggaaaaccataaccctggaagttgaatcttctga |
28610653 |
T |
|
| Q |
220 |
tactattgataacgtgaaggccaagattcaggataaggagggcattccaccggatcagcagcgattgatctttgctgggaaacaacttgaggatggaagg |
319 |
Q |
| |
|
|| || || ||||||||||| |||||||| || ||||| |||||||||||||||||||| |||||||||||||| ||||| || | || |||||||| |
|
|
| T |
28610654 |
cacaatcgacaacgtgaaggcgaagattcaagacaaggaaggcattccaccggatcagcaacgattgatctttgcagggaagcagttggaagatggaaga |
28610753 |
T |
|
| Q |
320 |
actcttgctgattataatattcagaaagagtctacgcttcatctggttct |
369 |
Q |
| |
|
|||||||| ||||||||||| ||||||||| |||||||||||| ||||| |
|
|
| T |
28610754 |
actcttgcggattataatatccagaaagagagtacgcttcatctagttct |
28610803 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 25948576 - 25948652
Alignment:
| Q |
266 |
ccaccggatcagcagcgattgatctttgctgggaaacaacttgaggatggaaggactcttgctgattataatattca |
342 |
Q |
| |
|
||||||||||||||||| ||||| |||||||| ||||| ||||| |||||||| || || |||||||| || ||||| |
|
|
| T |
25948576 |
ccaccggatcagcagcgtttgatttttgctggaaaacagcttgaagatggaagaaccctagctgattacaacattca |
25948652 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 320 - 384
Target Start/End: Original strand, 28610526 - 28610590
Alignment:
| Q |
320 |
actcttgctgattataatattcagaaagagtctacgcttcatctggttctcaggctccgtggtgg |
384 |
Q |
| |
|
|||||||| ||||| ||||| ||||||||||| |||||||| || |||||| | ||||||||||| |
|
|
| T |
28610526 |
actcttgcggattacaatatccagaaagagtccacgcttcaccttgttctccgtctccgtggtgg |
28610590 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 104; Significance: 1e-51; HSPs: 14)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 17 - 360
Target Start/End: Complemental strand, 35000051 - 34999708
Alignment:
| Q |
17 |
attcaagacaaggaaggcattccaccggatcagcaacgattgatctttgcagggaagcagttggaagatggaagaactcttgcggattataatatccaga |
116 |
Q |
| |
|
||||| |||||||| |||||||| || || |||||||||||||| ||||| || |||||| | |||||||| | |||||||| ||||| || || |||| |
|
|
| T |
35000051 |
attcaggacaaggagggcattcccccagaccagcaacgattgatttttgctggaaagcagctcgaagatggccggactcttgctgattacaacattcaga |
34999952 |
T |
|
| Q |
117 |
aagagagtacgcttcatctagttctgaggttgcgcggtgggatgcagatatttgtgaagacgttgaccgggaagacaattactctagaggtggagagttc |
216 |
Q |
| |
|
||||| ||| ||||| || || || | ||| | || || |||||||| ||||||||||| |||||||| ||||| ||||| |||||||| || ||||| |
|
|
| T |
34999951 |
aagagtctacccttcaccttgtccttcgtttgaggggaggtatgcagatctttgtgaagacattgaccggaaagaccattaccctagaggtagaaagttc |
34999852 |
T |
|
| Q |
217 |
tgatactattgataacgtgaaggccaagattcaggataaggagggcattccaccggatcagcagcgattgatctttgctgggaaacaacttgaggatgga |
316 |
Q |
| |
|
|| || ||||||||||| ||||| || || ||||| |||||||| || ||||| ||||||||| | ||||||||||||||||| || | ||||||||| |
|
|
| T |
34999851 |
agacacaattgataacgtaaaggcaaaaatacaggacaaggagggaatcccaccagatcagcagaggttgatctttgctgggaagcagttagaggatgga |
34999752 |
T |
|
| Q |
317 |
aggactcttgctgattataatattcagaaagagtctacgcttca |
360 |
Q |
| |
|
||||| |||||||| || || |||||||| |||||||| ||||| |
|
|
| T |
34999751 |
aggacccttgctgactacaacattcagaaggagtctacacttca |
34999708 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 15 - 360
Target Start/End: Original strand, 6168482 - 6168827
Alignment:
| Q |
15 |
agattcaagacaaggaaggcattccaccggatcagcaacgattgatctttgcagggaagcagttggaagatggaagaactcttgcggattataatatcca |
114 |
Q |
| |
|
||||||| ||||||||||||||||| || || |||||| | ||||| ||||| || |||||| | |||||||| ||||| | || |||||||| ||||| |
|
|
| T |
6168482 |
agattcaggacaaggaaggcattcccccagaccagcaaaggttgatttttgctggaaagcagcttgaagatggcagaaccttggcagattataacatcca |
6168581 |
T |
|
| Q |
115 |
gaaagagagtacgcttcatctagttctgaggttgcgcggtgggatgcagatatttgtgaagacgttgaccgggaagacaattactctagaggtggagagt |
214 |
Q |
| |
|
|||||| || |||||||| || || | ||| | || || |||||||| ||||||||||| ||||| || ||||| ||||| | |||||||| || |
|
|
| T |
6168582 |
gaaagaatccactcttcatcttgtccttcgtttgaggggaggcatgcagatctttgtgaagactttgacaggaaagaccattacattggaggtggaaagc |
6168681 |
T |
|
| Q |
215 |
tctgatactattgataacgtgaaggccaagattcaggataaggagggcattccaccggatcagcagcgattgatctttgctgggaaacaacttgaggatg |
314 |
Q |
| |
|
|| || || || ||||| || ||||| || || |||||||||||||| |||||||| ||||||||| | ||||||||||||||||| || ||||| |||| |
|
|
| T |
6168682 |
tcagacaccatcgataatgttaaggcaaaaatacaggataaggagggaattccacctgatcagcagaggttgatctttgctgggaagcagcttgaagatg |
6168781 |
T |
|
| Q |
315 |
gaaggactcttgctgattataatattcagaaagagtctacgcttca |
360 |
Q |
| |
|
| ||||| | |||||||| || |||||||||||||| || ||||| |
|
|
| T |
6168782 |
gccggactttggctgattacaacattcagaaagagtccacccttca |
6168827 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 62 - 360
Target Start/End: Complemental strand, 35000234 - 34999936
Alignment:
| Q |
62 |
tttgcagggaagcagttggaagatggaagaactcttgcggattataatatccagaaagagagtacgcttcatctagttctgaggttgcgcggtgggatgc |
161 |
Q |
| |
|
||||| || |||||| | |||||||| ||||||||||| ||||| || |||||||||||| || ||||| || ||| || | | || ||||| |||| |
|
|
| T |
35000234 |
tttgctggaaagcagctcgaagatggcagaactcttgctgattacaacatccagaaagagtcaactcttcaccttgttttgcgtcttcgtggtggtatgc |
35000135 |
T |
|
| Q |
162 |
agatatttgtgaagacgttgaccgggaagacaattactctagaggtggagagttctgatactattgataacgtgaaggccaagattcaggataaggaggg |
261 |
Q |
| |
|
|||| || |||||||| | || || || ||||||||| | ||||| ||||| || || |||||||| || |||||||| || |||||||| |||||||| |
|
|
| T |
35000134 |
agattttcgtgaagactcttactggcaaaacaattactttggaggtagagagctcagacactattgacaatgtgaaggctaaaattcaggacaaggaggg |
35000035 |
T |
|
| Q |
262 |
cattccaccggatcagcagcgattgatctttgctgggaaacaacttgaggatggaaggactcttgctgattataatattcagaaagagtctacgcttca |
360 |
Q |
| |
|
|||||| || || ||||| |||||||| |||||||| || || || || ||||| |||||||||||||||| || ||||||||||||||||| ||||| |
|
|
| T |
35000034 |
cattcccccagaccagcaacgattgatttttgctggaaagcagctcgaagatggccggactcttgctgattacaacattcagaaagagtctacccttca |
34999936 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 23 - 360
Target Start/End: Original strand, 6168946 - 6169283
Alignment:
| Q |
23 |
gacaaggaaggcattccaccggatcagcaacgattgatctttgcagggaagcagttggaagatggaagaactcttgcggattataatatccagaaagaga |
122 |
Q |
| |
|
||||||||||| || ||||| |||||||| | ||||||||||| ||||||||| | |||||||| | ||| | || ||||| || || ||||||||| |
|
|
| T |
6168946 |
gacaaggaaggaatcccaccagatcagcagaggttgatctttgctgggaagcagcttgaagatggccggactttggctgattacaacattcagaaagagt |
6169045 |
T |
|
| Q |
123 |
gtacgcttcatctagttctgaggttgcgcggtgggatgcagatatttgtgaagacgttgaccgggaagacaattactctagaggtggagagttctgatac |
222 |
Q |
| |
|
|| ||||| || || || | || | || || |||||||| ||||| |||||||||||||| ||||| || || ||||||| || ||||| || || |
|
|
| T |
6169046 |
ccacccttcaccttgtccttcgtctgaggggaggtatgcagatctttgtaaagacgttgaccggtaagaccatcaccttagaggtagaaagttcagacac |
6169145 |
T |
|
| Q |
223 |
tattgataacgtgaaggccaagattcaggataaggagggcattccaccggatcagcagcgattgatctttgctgggaaacaacttgaggatggaaggact |
322 |
Q |
| |
|
|||||||| |||||||| || || ||||| ||||| || || ||||| ||||||||| | ||||||||||||||||| ||| | |||||||||||||| |
|
|
| T |
6169146 |
aattgataatgtgaaggcaaaaatccaggacaaggaaggaatcccaccagatcagcagaggttgatctttgctgggaagcaattggaggatggaaggacc |
6169245 |
T |
|
| Q |
323 |
cttgctgattataatattcagaaagagtctacgcttca |
360 |
Q |
| |
|
|||||||| || || |||||||| |||||||| ||||| |
|
|
| T |
6169246 |
cttgctgactacaacattcagaaggagtctactcttca |
6169283 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 158 - 360
Target Start/End: Original strand, 6168853 - 6169055
Alignment:
| Q |
158 |
atgcagatatttgtgaagacgttgaccgggaagacaattactctagaggtggagagttctgatactattgataacgtgaaggccaagattcaggataagg |
257 |
Q |
| |
|
|||||||| |||||||||||||||||||| ||||| || || ||||||| || ||||| || || |||||||| |||||||| || || ||||| |||| |
|
|
| T |
6168853 |
atgcagatctttgtgaagacgttgaccggtaagaccatcaccttagaggtagaaagttcagacacaattgataatgtgaaggcaaaaatccaggacaagg |
6168952 |
T |
|
| Q |
258 |
agggcattccaccggatcagcagcgattgatctttgctgggaaacaacttgaggatggaaggactcttgctgattataatattcagaaagagtctacgct |
357 |
Q |
| |
|
| || || ||||| ||||||||| | ||||||||||||||||| || ||||| ||||| ||||| | |||||||| || |||||||||||||| || || |
|
|
| T |
6168953 |
aaggaatcccaccagatcagcagaggttgatctttgctgggaagcagcttgaagatggccggactttggctgattacaacattcagaaagagtccaccct |
6169052 |
T |
|
| Q |
358 |
tca |
360 |
Q |
| |
|
||| |
|
|
| T |
6169053 |
tca |
6169055 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 15 - 351
Target Start/End: Complemental strand, 35000737 - 35000401
Alignment:
| Q |
15 |
agattcaagacaaggaaggcattccaccggatcagcaacgattgatctttgcagggaagcagttggaagatggaagaactcttgcggattataatatcca |
114 |
Q |
| |
|
||||||||||||||||||| || ||||| |||||||| || | || ||||| || || || |||| ||||| | || |||||||||||||| ||||| |
|
|
| T |
35000737 |
agattcaagacaaggaagggatcccacctgatcagcagcgtctcatttttgctggcaaacaactggaggatgggcgtacccttgcggattataacatcca |
35000638 |
T |
|
| Q |
115 |
gaaagagagtacgcttcatctagttctgaggttgcgcggtgggatgcagatatttgtgaagacgttgaccgggaagacaattactctagaggtggagagt |
214 |
Q |
| |
|
|| ||| ||| |||||| | || || | | || ||||| ||||| |||||||||||||| | || || ||||||||||| || ||||||||||| |
|
|
| T |
35000637 |
aaaggagtctacccttcatttggtgctccgtctccgtggtggtatgcaaatatttgtgaagactctcacaggaaagacaattacccttgaggtggagagc |
35000538 |
T |
|
| Q |
215 |
tctgatactattgataacgtgaaggccaagattcaggataaggagggcattccaccggatcagcagcgattgatctttgctgggaaacaacttgaggatg |
314 |
Q |
| |
|
||||| || ||||| || || ||||||||||| || || || ||||| || ||||| ||||||||| | | ||||||||||| ||||| ||||| |||| |
|
|
| T |
35000537 |
tctgacaccattgacaatgtcaaggccaagatacaagacaaagagggtatcccaccagatcagcagaggctcatctttgctggaaaacagcttgaagatg |
35000438 |
T |
|
| Q |
315 |
gaaggactcttgctgattataatattcagaaagagtc |
351 |
Q |
| |
|
| || || | ||||||||||| |||||||||||||| |
|
|
| T |
35000437 |
gcagaaccttggctgattataacattcagaaagagtc |
35000401 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 149 - 363
Target Start/End: Original strand, 6168160 - 6168374
Alignment:
| Q |
149 |
cgcggtgggatgcagatatttgtgaagacgttgaccgggaagacaattactctagaggtggagagttctgatactattgataacgtgaaggccaagattc |
248 |
Q |
| |
|
|||||||| |||||||| ||||| ||||| | || || ||||| |||||| | ||||| ||||| || || || ||||| || |||||||||||||| | |
|
|
| T |
6168160 |
cgcggtggtatgcagatttttgttaagacccttacaggaaagactattactttggaggtagagagctcggacacaattgacaatgtgaaggccaagatac |
6168259 |
T |
|
| Q |
249 |
aggataaggagggcattccaccggatcagcagcgattgatctttgctgggaaacaacttgaggatggaaggactcttgctgattataatattcagaaaga |
348 |
Q |
| |
|
| || |||||||| || || || || ||||| | ||||| |||||||| || |||||||| ||||| | ||||| ||||||||||| || |||||||| |
|
|
| T |
6168260 |
aagacaaggagggtatccccccagaccagcaaaggttgatttttgctggaaagcaacttgaagatggtcgaactctagctgattataacatccagaaaga |
6168359 |
T |
|
| Q |
349 |
gtctacgcttcatct |
363 |
Q |
| |
|
||| || |||||||| |
|
|
| T |
6168360 |
gtcgactcttcatct |
6168374 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 188 - 385
Target Start/End: Complemental strand, 35000792 - 35000595
Alignment:
| Q |
188 |
aagacaattactctagaggtggagagttctgatactattgataacgtgaaggccaagattcaggataaggagggcattccaccggatcagcagcgattga |
287 |
Q |
| |
|
||||| || ||||| || || |||||||| ||||| || || || || |||||||||||||| || ||||| || || ||||| ||||||||||| | | |
|
|
| T |
35000792 |
aagaccatcactctcgaagttgagagttcagataccatagacaatgttaaggccaagattcaagacaaggaagggatcccacctgatcagcagcgtctca |
35000693 |
T |
|
| Q |
288 |
tctttgctgggaaacaacttgaggatggaaggactcttgctgattataatattcagaaagagtctacgcttcatctggttctcaggctccgtggtggt |
385 |
Q |
| |
|
| |||||||| |||||||| |||||||| | || ||||| |||||||| || || || |||||||| |||||| |||| ||| | |||||||||||| |
|
|
| T |
35000692 |
tttttgctggcaaacaactggaggatgggcgtacccttgcggattataacatccaaaaggagtctacccttcatttggtgctccgtctccgtggtggt |
35000595 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 15 - 363
Target Start/End: Original strand, 6168254 - 6168602
Alignment:
| Q |
15 |
agattcaagacaaggaaggcattccaccggatcagcaacgattgatctttgcagggaagcagttggaagatggaagaactcttgcggattataatatcca |
114 |
Q |
| |
|
|||| ||||||||||| || || || || || |||||| | ||||| ||||| || ||||| | |||||||| ||||||| || |||||||| ||||| |
|
|
| T |
6168254 |
agatacaagacaaggagggtatccccccagaccagcaaaggttgatttttgctggaaagcaacttgaagatggtcgaactctagctgattataacatcca |
6168353 |
T |
|
| Q |
115 |
gaaagagagtacgcttcatctagttctgaggttgcgcggtgggatgcagatatttgtgaagacgttgaccgggaagacaattactctagaggtggagagt |
214 |
Q |
| |
|
||||||| || |||||||| || || | | || ||||| |||||||| ||||| ||||| | || || || || |||||| | ||||||||||| |
|
|
| T |
6168354 |
gaaagagtcgactcttcatcttgtcttgcgacttcgtggtggtatgcagatttttgttaagaccctaactggaaaaacgattactttggaggtggagagc |
6168453 |
T |
|
| Q |
215 |
tctgatactattgataacgtgaaggccaagattcaggataaggagggcattccaccggatcagcagcgattgatctttgctgggaaacaacttgaggatg |
314 |
Q |
| |
|
|| || || ||||| || || ||||| ||||||||||| ||||| |||||||| || || ||||| | ||||| |||||||| || || ||||| |||| |
|
|
| T |
6168454 |
tcagacacaattgacaatgtaaaggctaagattcaggacaaggaaggcattcccccagaccagcaaaggttgatttttgctggaaagcagcttgaagatg |
6168553 |
T |
|
| Q |
315 |
gaaggactcttgctgattataatattcagaaagagtctacgcttcatct |
363 |
Q |
| |
|
| || || | || |||||||| || |||||||| || || |||||||| |
|
|
| T |
6168554 |
gcagaaccttggcagattataacatccagaaagaatccactcttcatct |
6168602 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 152 - 315
Target Start/End: Original strand, 6167935 - 6168098
Alignment:
| Q |
152 |
ggtgggatgcagatatttgtgaagacgttgaccgggaagacaattactctagaggtggagagttctgatactattgataacgtgaaggccaagattcagg |
251 |
Q |
| |
|
||||| ||||| |||||||||||||| | || || ||||| ||||| || ||||||||||| |||||||| ||||| || || ||||||||||| || | |
|
|
| T |
6167935 |
ggtggtatgcaaatatttgtgaagactctcactggaaagacgattacccttgaggtggagagctctgataccattgacaatgttaaggccaagatacaag |
6168034 |
T |
|
| Q |
252 |
ataaggagggcattccaccggatcagcagcgattgatctttgctgggaaacaacttgaggatgg |
315 |
Q |
| |
|
| || ||||| || ||||| || |||||| | | ||||||||||| ||||| ||||| ||||| |
|
|
| T |
6168035 |
acaaagagggtatcccaccagaccagcagaggctcatctttgctggaaaacagcttgaagatgg |
6168098 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 152 - 360
Target Start/End: Complemental strand, 35000372 - 35000164
Alignment:
| Q |
152 |
ggtgggatgcagatatttgtgaagacgttgaccgggaagacaattactctagaggtggagagttctgatactattgataacgtgaaggccaagattcagg |
251 |
Q |
| |
|
||||| |||||||| ||||||||||| | || || |||||||||||| | ||||| ||||| || || || ||||| || |||||||| ||||| |||| |
|
|
| T |
35000372 |
ggtggtatgcagatttttgtgaagacccttacaggaaagacaattactttggaggtagagagctcggacacaattgacaatgtgaaggctaagatacagg |
35000273 |
T |
|
| Q |
252 |
ataaggagggcattccaccggatcagcagcgattgatctttgctgggaaacaacttgaggatggaaggactcttgctgattataatattcagaaagagtc |
351 |
Q |
| |
|
| || ||||| || || || || |||||| | | || |||||||| || || || || ||||| || |||||||||||||| || || ||||||||||| |
|
|
| T |
35000272 |
acaaagagggtatccccccagaccagcagaggctcatttttgctggaaagcagctcgaagatggcagaactcttgctgattacaacatccagaaagagtc |
35000173 |
T |
|
| Q |
352 |
tacgcttca |
360 |
Q |
| |
|
|| ||||| |
|
|
| T |
35000172 |
aactcttca |
35000164 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 230 - 385
Target Start/End: Original strand, 33775044 - 33775199
Alignment:
| Q |
230 |
aacgtgaaggccaagattcaggataaggagggcattccaccggatcagcagcgattgatctttgctgggaaacaacttgaggatggaaggactcttgctg |
329 |
Q |
| |
|
||||| || |||||||| ||||||||||| || ||||| | ||| |||||| | |||||||| || || || || || ||||| || | || ||||||| |
|
|
| T |
33775044 |
aacgtcaaagccaagatccaggataaggaaggaattcccctggaccagcagaggttgatcttcgccggaaagcagctcgaggacggccgcacccttgctg |
33775143 |
T |
|
| Q |
330 |
attataatattcagaaagagtctacgcttcatctggttctcaggctccgtggtggt |
385 |
Q |
| |
|
|||| || || ||||| |||||||| |||||||| || ||| | || ||||||||| |
|
|
| T |
33775144 |
attacaacatccagaaggagtctacccttcatcttgtcctccgtctacgtggtggt |
33775199 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 188 - 385
Target Start/End: Original strand, 6167743 - 6167940
Alignment:
| Q |
188 |
aagacaattactctagaggtggagagttctgatactattgataacgtgaaggccaagattcaggataaggagggcattccaccggatcagcagcgattga |
287 |
Q |
| |
|
||||| || ||||| || || |||||||| ||||| || || || || ||||| || ||||| || ||||| || || ||||| || ||||||||| ||| |
|
|
| T |
6167743 |
aagaccatcactctcgaagttgagagttcagataccatagacaatgttaaggcaaaaattcaagacaaggaaggaatcccaccagaccagcagcgactga |
6167842 |
T |
|
| Q |
288 |
tctttgctgggaaacaacttgaggatggaaggactcttgctgattataatattcagaaagagtctacgcttcatctggttctcaggctccgtggtggt |
385 |
Q |
| |
|
| |||||||| || || || |||||||| | || |||||||||||||| || || || || || || || ||| |||| ||| | |||||||||||| |
|
|
| T |
6167843 |
tttttgctggcaagcagctggaggatgggcgtacccttgctgattataacatccaaaaggaatccactctccatttggtgctccgtctccgtggtggt |
6167940 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 114
Target Start/End: Original strand, 6167800 - 6167897
Alignment:
| Q |
17 |
attcaagacaaggaaggcattccaccggatcagcaacgattgatctttgcagggaagcagttggaagatggaagaactcttgcggattataatatcca |
114 |
Q |
| |
|
||||||||||||||||| || ||||| || ||||| ||| |||| ||||| || |||||| |||| ||||| | || ||||| |||||||| ||||| |
|
|
| T |
6167800 |
attcaagacaaggaaggaatcccaccagaccagcagcgactgatttttgctggcaagcagctggaggatgggcgtacccttgctgattataacatcca |
6167897 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 82; Significance: 2e-38; HSPs: 37)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 71 - 384
Target Start/End: Complemental strand, 31287162 - 31286849
Alignment:
| Q |
71 |
aagcagttggaagatggaagaactcttgcggattataatatccagaaagagagtacgcttcatctagttctgaggttgcgcggtgggatgcagatatttg |
170 |
Q |
| |
|
||||||||||||||||| | ||||| || |||||||||||||||||||| ||| || ||| | ||| ||||| | || ||||||||||| ||||||| |
|
|
| T |
31287162 |
aagcagttggaagatggccgtactctggctgattataatatccagaaagaatctactctgcatttggttttgaggcttcgaggtgggatgcaaatatttg |
31287063 |
T |
|
| Q |
171 |
tgaagacgttgaccgggaagacaattactctagaggtggagagttctgatactattgataacgtgaaggccaagattcaggataaggagggcattccacc |
270 |
Q |
| |
|
||||||| | ||||||||||| ||||| | |||||||| || |||||||| |||||||||||||| || ||||| |||||||||||||| |||||||| |
|
|
| T |
31287062 |
tgaagactcttaccgggaagactattaccttggaggtggaaagctctgatacgattgataacgtgaaagcgaagatacaggataaggagggtattccacc |
31286963 |
T |
|
| Q |
271 |
ggatcagcagcgattgatctttgctgggaaacaacttgaggatggaaggactcttgctgattataatattcagaaagagtctacgcttcatctggttctc |
370 |
Q |
| |
|
|| ||||| | | || |||||||| || || | |||||||| | ||| | || ||||| |||||||||||||| ||||| || ||||| ||||| |
|
|
| T |
31286962 |
agaccagcaaaggcttatttttgctggcaagcagttggaggatggtcgtactttggcagattacaatattcagaaagaatctaccctgcatcttgttctt |
31286863 |
T |
|
| Q |
371 |
aggctccgtggtgg |
384 |
Q |
| |
|
| ||||||||||| |
|
|
| T |
31286862 |
cgcctccgtggtgg |
31286849 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 152 - 339
Target Start/End: Complemental strand, 31287765 - 31287578
Alignment:
| Q |
152 |
ggtgggatgcagatatttgtgaagacgttgaccgggaagacaattactctagaggtggagagttctgatactattgataacgtgaaggccaagattcagg |
251 |
Q |
| |
|
||||| ||||| || ||||| ||||| | ||||| || || |||||| | ||||| |||||||| |||||||||||||| ||||| || |||||||||| |
|
|
| T |
31287765 |
ggtggtatgcaaatttttgtaaagacccttaccggaaaaactattactttggaggttgagagttcagatactattgataatgtgaaagctaagattcagg |
31287666 |
T |
|
| Q |
252 |
ataaggagggcattccaccggatcagcagcgattgatctttgctgggaaacaacttgaggatggaaggactcttgctgattataatat |
339 |
Q |
| |
|
||||||| ||||| || || ||||||||| || | |||||||| |||||||||||||| ||||||||||| ||||||||||||||||| |
|
|
| T |
31287665 |
ataaggaaggcatccctcctgatcagcagagacttatctttgcagggaaacaacttgaagatggaaggacccttgctgattataatat |
31287578 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 15 - 385
Target Start/End: Complemental strand, 31287674 - 31287304
Alignment:
| Q |
15 |
agattcaagacaaggaaggcattccaccggatcagcaacgattgatctttgcagggaagcagttggaagatggaagaactcttgcggattataatatcca |
114 |
Q |
| |
|
||||||| || ||||||||||| || || |||||||| || | |||||||||||||| || | ||||||||||| || ||||| |||||||||||||| |
|
|
| T |
31287674 |
agattcaggataaggaaggcatccctcctgatcagcagagacttatctttgcagggaaacaacttgaagatggaaggacccttgctgattataatatcca |
31287575 |
T |
|
| Q |
115 |
gaaagagagtacgcttcatctagttctgaggttgcgcggtgggatgcagatatttgtgaagacgttgaccgggaagacaattactctagaggtggagagt |
214 |
Q |
| |
|
|| || || || ||| | ||| || || | || ||||| ||||| || ||||| ||||| | ||||| || || |||||| | ||||| |||||| |
|
|
| T |
31287574 |
aaaggaatccactctgcatttggttttgcggcttcgtggtggtatgcaaatttttgtaaagacccttaccggaaaaactattactttggaggttgagagt |
31287475 |
T |
|
| Q |
215 |
tctgatactattgataacgtgaaggccaagattcaggataaggagggcattccaccggatcagcagcgattgatctttgctgggaaacaacttgaggatg |
314 |
Q |
| |
|
|| |||||||||||||| ||||| || |||||||| ||||||||||| || || || ||||||||| | | ||||||||||| || || ||||| |||| |
|
|
| T |
31287474 |
tcagatactattgataatgtgaaagctaagattcaagataaggagggtatccctcccgatcagcagaggcttatctttgctggtaagcagcttgaagatg |
31287375 |
T |
|
| Q |
315 |
gaaggactcttgctgattataatattcagaaagagtctacgcttcatctggttctcaggctccgtggtggt |
385 |
Q |
| |
|
||||||| |||||||||||||| ||||| || || || || || ||| ||||| | ||||| ||||||||| |
|
|
| T |
31287374 |
gaaggacccttgctgattataacattcaaaaggaatcgaccctccatttggttttgaggcttcgtggtggt |
31287304 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 158 - 360
Target Start/End: Complemental strand, 35100697 - 35100495
Alignment:
| Q |
158 |
atgcagatatttgtgaagacgttgaccgggaagacaattactctagaggtggagagttctgatactattgataacgtgaaggccaagattcaggataagg |
257 |
Q |
| |
|
|||||||| |||||||||||||||||||| ||||| || || ||||||| || ||||| || || |||||||| |||||||| || || ||||| |||| |
|
|
| T |
35100697 |
atgcagatctttgtgaagacgttgaccggtaagaccatcaccttagaggtagaaagttcagacacaattgataatgtgaaggcaaaaatccaggacaagg |
35100598 |
T |
|
| Q |
258 |
agggcattccaccggatcagcagcgattgatctttgctgggaaacaacttgaggatggaaggactcttgctgattataatattcagaaagagtctacgct |
357 |
Q |
| |
|
| || || ||||| ||||||||| | ||||||||||||||||| ||| | |||||||||||||| |||||||| || || |||||||| |||||||| || |
|
|
| T |
35100597 |
aaggaatcccaccagatcagcagaggttgatctttgctgggaagcaattggaggatggaaggacccttgctgactacaacattcagaaggagtctactct |
35100498 |
T |
|
| Q |
358 |
tca |
360 |
Q |
| |
|
||| |
|
|
| T |
35100497 |
tca |
35100495 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 158 - 360
Target Start/End: Complemental strand, 35109089 - 35108887
Alignment:
| Q |
158 |
atgcagatatttgtgaagacgttgaccgggaagacaattactctagaggtggagagttctgatactattgataacgtgaaggccaagattcaggataagg |
257 |
Q |
| |
|
|||||||| |||||||||||||||||||| ||||| || || ||||||| || ||||| || || |||||||| |||||||| || || ||||| |||| |
|
|
| T |
35109089 |
atgcagatctttgtgaagacgttgaccggtaagaccatcaccttagaggtagaaagttcagacacaattgataatgtgaaggcaaaaatccaggacaagg |
35108990 |
T |
|
| Q |
258 |
agggcattccaccggatcagcagcgattgatctttgctgggaaacaacttgaggatggaaggactcttgctgattataatattcagaaagagtctacgct |
357 |
Q |
| |
|
| || || ||||| ||||||||| | ||||||||||||||||| ||| | |||||||||||||| |||||||| || || |||||||| |||||||| || |
|
|
| T |
35108989 |
aaggaatcccaccagatcagcagaggttgatctttgctgggaagcaattggaggatggaaggacccttgctgactacaacattcagaaggagtctactct |
35108890 |
T |
|
| Q |
358 |
tca |
360 |
Q |
| |
|
||| |
|
|
| T |
35108889 |
tca |
35108887 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 158 - 360
Target Start/End: Original strand, 36295011 - 36295213
Alignment:
| Q |
158 |
atgcagatatttgtgaagacgttgaccgggaagacaattactctagaggtggagagttctgatactattgataacgtgaaggccaagattcaggataagg |
257 |
Q |
| |
|
|||||||| ||||||||||| ||||| || ||||| ||||| | |||||||| || ||||| || |||||||| || ||||| || || |||||||||| |
|
|
| T |
36295011 |
atgcagatctttgtgaagactttgacaggaaagaccattacattggaggtggaaagctctgacaccattgataatgttaaggctaaaatacaggataagg |
36295110 |
T |
|
| Q |
258 |
agggcattccaccggatcagcagcgattgatctttgctgggaaacaacttgaggatggaaggactcttgctgattataatattcagaaagagtctacgct |
357 |
Q |
| |
|
|||| || ||||| ||||||||| | ||||||||||||||||| || ||||| ||||| ||||| | ||||||||||| |||||||||||||| || || |
|
|
| T |
36295111 |
agggaatcccaccagatcagcagaggttgatctttgctgggaagcagcttgaagatggccggactttggctgattataacattcagaaagagtccaccct |
36295210 |
T |
|
| Q |
358 |
tca |
360 |
Q |
| |
|
||| |
|
|
| T |
36295211 |
tca |
36295213 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 158 - 360
Target Start/End: Original strand, 36295239 - 36295441
Alignment:
| Q |
158 |
atgcagatatttgtgaagacgttgaccgggaagacaattactctagaggtggagagttctgatactattgataacgtgaaggccaagattcaggataagg |
257 |
Q |
| |
|
|||||||| ||||||||||| |||||||| ||||| || || |||||||||| ||||| || ||||| ||||| || ||||| || || ||||| |||| |
|
|
| T |
36295239 |
atgcagatctttgtgaagacattgaccggaaagaccatcaccttagaggtggaaagttcagacactatcgataatgtcaaggcaaaaatccaggacaagg |
36295338 |
T |
|
| Q |
258 |
agggcattccaccggatcagcagcgattgatctttgctgggaaacaacttgaggatggaaggactcttgctgattataatattcagaaagagtctacgct |
357 |
Q |
| |
|
|||| || || || ||||||||| | ||||||||||||||||| ||| | |||||||||||||| |||||||| || || |||||||| |||||||| || |
|
|
| T |
36295339 |
agggaatccccccagatcagcagaggttgatctttgctgggaagcaattggaggatggaaggacccttgctgactacaacattcagaaggagtctactct |
36295438 |
T |
|
| Q |
358 |
tca |
360 |
Q |
| |
|
||| |
|
|
| T |
36295439 |
tca |
36295441 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 15 - 366
Target Start/End: Complemental strand, 31288358 - 31288007
Alignment:
| Q |
15 |
agattcaagacaaggaaggcattccaccggatcagcaacgattgatctttgcagggaagcagttggaagatggaagaactcttgcggattataatatcca |
114 |
Q |
| |
|
||||||||||||||||||| ||||| || ||||||||| | | || ||||| || || || ||||||||||| | || ||||||||||| || ||||| |
|
|
| T |
31288358 |
agattcaagacaaggaaggtattcctcccgatcagcaaaggcttatatttgctggtaaacaattggaagatggccgcacccttgcggattacaacatcca |
31288259 |
T |
|
| Q |
115 |
gaaagagagtacgcttcatctagttctgaggttgcgcggtgggatgcagatatttgtgaagacgttgaccgggaagacaattactctagaggtggagagt |
214 |
Q |
| |
|
|| || || ||||| || || ||| | ||| | ||||| |||||||||||||||||||| |||||||| || ||||| || || ||||| || |
|
|
| T |
31288258 |
aaaggaatccacccttcaccttgtgctgcgattgagaggtggcatgcagatatttgtgaagacattgaccggaaaaacaatcacccttgaggttgaatca |
31288159 |
T |
|
| Q |
215 |
tctgatactattgataacgtgaaggccaagattcaggataaggagggcattccaccggatcagcagcgattgatctttgctgggaaacaacttgaggatg |
314 |
Q |
| |
|
|||||||| |||||||| || ||||||||||| || || || ||||| || || || ||||||||| | | |||||||| |||||||| || ||||||| |
|
|
| T |
31288158 |
tctgatacaattgataatgtcaaggccaagatccaagacaaagagggtatccctcctgatcagcagaggcttatctttgcagggaaacagctcgaggatg |
31288059 |
T |
|
| Q |
315 |
gaaggactcttgctgattataatattcagaaagagtctacgcttcatctggt |
366 |
Q |
| |
|
|||| || || ||||||||||| || ||||| || ||||| ||||||||||| |
|
|
| T |
31288058 |
gaagaaccctagctgattataacatccagaaggaatctacccttcatctggt |
31288007 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 59 - 280
Target Start/End: Complemental strand, 31288086 - 31287865
Alignment:
| Q |
59 |
atctttgcagggaagcagttggaagatggaagaactcttgcggattataatatccagaaagagagtacgcttcatctagttctgaggttgcgcggtggga |
158 |
Q |
| |
|
|||||||||||||| ||| | || ||||||||||| || || |||||||| |||||||| || ||| |||||||| || || || || | ||||| | |
|
|
| T |
31288086 |
atctttgcagggaaacagctcgaggatggaagaaccctagctgattataacatccagaaggaatctacccttcatctggtgcttagattaagaggtggaa |
31287987 |
T |
|
| Q |
159 |
tgcagatatttgtgaagacgttgaccgggaagacaattactctagaggtggagagttctgatactattgataacgtgaaggccaagattcaggataagga |
258 |
Q |
| |
|
||||||| ||||| ||||| ||||| || ||||| |||||| | |||||||||||||| |||||||||||||| ||||| || |||||||| |||||||| |
|
|
| T |
31287986 |
tgcagatttttgtaaagactttgactggaaagactattactttggaggtggagagttcagatactattgataatgtgaaagctaagattcaagataagga |
31287887 |
T |
|
| Q |
259 |
gggcattccaccggatcagcag |
280 |
Q |
| |
|
||| || || || ||||||||| |
|
|
| T |
31287886 |
gggtatccctccagatcagcag |
31287865 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 158 - 360
Target Start/End: Complemental strand, 35109317 - 35109115
Alignment:
| Q |
158 |
atgcagatatttgtgaagacgttgaccgggaagacaattactctagaggtggagagttctgatactattgataacgtgaaggccaagattcaggataagg |
257 |
Q |
| |
|
|||||||| ||||||||||| ||||| || ||||| ||||| | |||||||| || || || || |||||||| || ||||| || || |||||||||| |
|
|
| T |
35109317 |
atgcagatctttgtgaagactttgacaggaaagaccattacattggaggtggaaagctcagacaccattgataatgttaaggcaaaaatacaggataagg |
35109218 |
T |
|
| Q |
258 |
agggcattccaccggatcagcagcgattgatctttgctgggaaacaacttgaggatggaaggactcttgctgattataatattcagaaagagtctacgct |
357 |
Q |
| |
|
|||| || ||||| ||||||||| | ||||||||||||||||| || ||||| ||||| ||||| | || ||||| || ||||||||||||||||| || |
|
|
| T |
35109217 |
agggaatcccacctgatcagcagaggttgatctttgctgggaagcagcttgaagatggccggactttggccgattacaacattcagaaagagtctaccct |
35109118 |
T |
|
| Q |
358 |
tca |
360 |
Q |
| |
|
||| |
|
|
| T |
35109117 |
tca |
35109115 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 62 - 363
Target Start/End: Original strand, 36294459 - 36294760
Alignment:
| Q |
62 |
tttgcagggaagcagttggaagatggaagaactcttgcggattataatatccagaaagagagtacgcttcatctagttctgaggttgcgcggtgggatgc |
161 |
Q |
| |
|
||||| || |||||| | |||||||| ||||||||||| ||||| || |||||||||||| || ||||| || || || | | || ||||| |||| |
|
|
| T |
36294459 |
tttgctggaaagcagcttgaagatggcagaactcttgctgattacaacatccagaaagagtcaactcttcaccttgtcttgcgtcttcgtggtggtatgc |
36294558 |
T |
|
| Q |
162 |
agatatttgtgaagacgttgaccgggaagacaattactctagaggtggagagttctgatactattgataacgtgaaggccaagattcaggataaggaggg |
261 |
Q |
| |
|
|||| ||||||||||| | || || |||||||||||| | ||||| ||||| || || || ||||| || |||||||||||||| || || |||||||| |
|
|
| T |
36294559 |
agatttttgtgaagactcttactggcaagacaattactttggaggtagagagctcggacacaattgacaatgtgaaggccaagatacaagacaaggaggg |
36294658 |
T |
|
| Q |
262 |
cattccaccggatcagcagcgattgatctttgctgggaaacaacttgaggatggaaggactcttgctgattataatattcagaaagagtctacgcttcat |
361 |
Q |
| |
|
||||| || || ||||| | ||||| |||||||| || |||||||| || || | ||||| |||||||||||||| ||||||||||| || |||||| |
|
|
| T |
36294659 |
tattcccccagaccagcaaaggttgatttttgctggaaagcaacttgaagacggtcgaactctggctgattataatatccagaaagagtcgactcttcat |
36294758 |
T |
|
| Q |
362 |
ct |
363 |
Q |
| |
|
|| |
|
|
| T |
36294759 |
ct |
36294760 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 62 - 384
Target Start/End: Complemental strand, 31259892 - 31259570
Alignment:
| Q |
62 |
tttgcagggaagcagttggaagatggaagaactcttgcggattataatatccagaaagagagtacgcttcatctagttctgaggttgcgcggtgggatgc |
161 |
Q |
| |
|
||||| || ||||||||||| ||||| | ||| | || ||||||||||||||||| || ||| | ||| | ||| ||||| | || ||||| |||| |
|
|
| T |
31259892 |
tttgctggaaagcagttggaggatggtcgtactttggccgattataatatccagaaggaatctactttgcatttggttttgaggcttcgtggtggcatgc |
31259793 |
T |
|
| Q |
162 |
agatatttgtgaagacgttgaccgggaagacaattactctagaggtggagagttctgatactattgataacgtgaaggccaagattcaggataaggaggg |
261 |
Q |
| |
|
| |||||||||||||| | || |||||||| ||||| | |||||||| || ||||||||||||||||| ||||| || ||||| || ||||||||||| |
|
|
| T |
31259792 |
aaatatttgtgaagacacttactgggaagactattaccttggaggtggaaagctctgatactattgataatgtgaaagcaaagatacaagataaggaggg |
31259693 |
T |
|
| Q |
262 |
cattccaccggatcagcagcgattgatctttgctgggaaacaacttgaggatggaaggactcttgctgattataatattcagaaagagtctacgcttcat |
361 |
Q |
| |
|
||||| || ||||||||| | | || |||||||| || || | |||||||| | ||||| || ||||| |||||||||||||| ||||| || ||| |
|
|
| T |
31259692 |
tattcccccagatcagcagaggcttatttttgctggcaagcagttggaggatggtcgtactctggcagattacaatattcagaaagaatctaccctgcat |
31259593 |
T |
|
| Q |
362 |
ctggttctcaggctccgtggtgg |
384 |
Q |
| |
|
|| ||||| | ||||||||||| |
|
|
| T |
31259592 |
cttgttcttcgtctccgtggtgg |
31259570 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 59 - 381
Target Start/End: Complemental strand, 31260351 - 31260029
Alignment:
| Q |
59 |
atctttgcagggaagcagttggaagatggaagaactcttgcggattataatatccagaaagagagtacgcttcatctagttctgaggttgcgcggtggga |
158 |
Q |
| |
|
|||||||||||||| || | ||||||||||| || || || |||||||| |||||||| || ||| |||||| | || || || ||| | || || | |
|
|
| T |
31260351 |
atctttgcagggaaacaactagaagatggaaggaccctagctgattataacatccagaaggaatctacccttcatttggtgcttagattgagaggcggaa |
31260252 |
T |
|
| Q |
159 |
tgcagatatttgtgaagacgttgaccgggaagacaattactctagaggtggagagttctgatactattgataacgtgaaggccaagattcaggataagga |
258 |
Q |
| |
|
|||| || ||||| ||||| || || || || || |||||| | ||||| |||||||| |||||||||||||| ||||| || |||||||| |||||||| |
|
|
| T |
31260251 |
tgcaaatttttgttaagactttaactggaaaaactattactttggaggttgagagttcagatactattgataatgtgaaagctaagattcaagataagga |
31260152 |
T |
|
| Q |
259 |
gggcattccaccggatcagcagcgattgatctttgctgggaaacaacttgaggatggaaggactcttgctgattataatattcagaaagagtctacgctt |
358 |
Q |
| |
|
||| || || || ||||| ||| | | ||||||||||| || || ||||| ||||||||||| ||||| |||||||| || ||||| ||||| || || |
|
|
| T |
31260151 |
gggtatccctcctgatcaacagaggcttatctttgctggtaagcagcttgaagatggaaggacacttgccgattataacatccagaaggagtccactctc |
31260052 |
T |
|
| Q |
359 |
catctggttctcaggctccgtgg |
381 |
Q |
| |
|
||| ||||| | ||||| ||||| |
|
|
| T |
31260051 |
catttggttttgaggcttcgtgg |
31260029 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 15 - 369
Target Start/End: Complemental strand, 35109688 - 35109334
Alignment:
| Q |
15 |
agattcaagacaaggaaggcattccaccggatcagcaacgattgatctttgcagggaagcagttggaagatggaagaactcttgcggattataatatcca |
114 |
Q |
| |
|
||||||| |||||||| |||||||| || || ||||| | | || ||||| || |||||| | |||||||| ||||||||||| ||||| || ||||| |
|
|
| T |
35109688 |
agattcaggacaaggagggcattcccccagaccagcagaggctcatttttgctggaaagcagcttgaagatggcagaactcttgctgattacaacatcca |
35109589 |
T |
|
| Q |
115 |
gaaagagagtacgcttcatctagttctgaggttgcgcggtgggatgcagatatttgtgaagacgttgaccgggaagacaattactctagaggtggagagt |
214 |
Q |
| |
|
||||||| || ||||| || || || | | |||||||| |||||||| ||||| ||||| | || || || ||||||||| | ||||| ||||| |
|
|
| T |
35109588 |
gaaagagtcgactcttcaccttgtcttgcgtcttcgcggtggtatgcagatttttgttaagacactcacaggcaaaacaattactttggaggtagagagc |
35109489 |
T |
|
| Q |
215 |
tctgatactattgataacgtgaaggccaagattcaggataaggagggcattccaccggatcagcagcgattgatctttgctgggaaacaacttgaggatg |
314 |
Q |
| |
|
|| || ||||||||||| || ||||||||||| ||||| |||||||| || || || || ||||| | ||||| |||||||| || || ||||| |||| |
|
|
| T |
35109488 |
tcggacactattgataatgtcaaggccaagatacaggacaaggagggtatccccccagaccagcaaaggttgatttttgctggaaagcagcttgaagatg |
35109389 |
T |
|
| Q |
315 |
gaaggactcttgctgattataatattcagaaagagtctacgcttcatctggttct |
369 |
Q |
| |
|
| ||||| | ||||||||||| |||||||| || || || |||||||| ||||| |
|
|
| T |
35109388 |
gcaggacattggctgattataacattcagaaggaatcaacccttcatcttgttct |
35109334 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 15 - 360
Target Start/End: Complemental strand, 35110144 - 35109799
Alignment:
| Q |
15 |
agattcaagacaaggaaggcattccaccggatcagcaacgattgatctttgcagggaagcagttggaagatggaagaactcttgcggattataatatcca |
114 |
Q |
| |
|
||||||| |||||||| |||||||| || || ||||| | | || ||||| || || ||| | |||||||| ||||||||||| ||||| || ||||| |
|
|
| T |
35110144 |
agattcaggacaaggagggcattcccccagaccagcagaggctcatttttgctggaaaacagcttgaagatggcagaactcttgctgattacaacatcca |
35110045 |
T |
|
| Q |
115 |
gaaagagagtacgcttcatctagttctgaggttgcgcggtgggatgcagatatttgtgaagacgttgaccgggaagacaattactctagaggtggagagt |
214 |
Q |
| |
|
||||||| || ||||| || || || | | || ||||| |||||||| ||||| ||||| | || || |||||||||||| | ||||| ||||| |
|
|
| T |
35110044 |
gaaagagtcaactcttcaccttgtcttgcgtcttcgtggtggtatgcagatttttgtaaagacccttacaggaaagacaattactttggaggttgagagc |
35109945 |
T |
|
| Q |
215 |
tctgatactattgataacgtgaaggccaagattcaggataaggagggcattccaccggatcagcagcgattgatctttgctgggaaacaacttgaggatg |
314 |
Q |
| |
|
|| || || ||||| || || ||||| ||||||||||| |||||||||||||| || || |||||| | | || |||||||| ||||| ||||| |||| |
|
|
| T |
35109944 |
tcggacacgattgacaatgtaaaggctaagattcaggacaaggagggcattcccccagaccagcagaggctcatttttgctggaaaacagcttgaagatg |
35109845 |
T |
|
| Q |
315 |
gaaggactcttgctgattataatattcagaaagagtctacgcttca |
360 |
Q |
| |
|
| || |||||||||||||| || || ||||||||||| || ||||| |
|
|
| T |
35109844 |
gcagaactcttgctgattacaacatccagaaagagtcaactcttca |
35109799 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 15 - 360
Target Start/End: Complemental strand, 35110372 - 35110027
Alignment:
| Q |
15 |
agattcaagacaaggaaggcattccaccggatcagcaacgattgatctttgcagggaagcagttggaagatggaagaactcttgcggattataatatcca |
114 |
Q |
| |
|
||||||| |||||||| |||||||| || || ||||| | | || ||||| || || ||| | |||||||| ||||||||||| ||||| || ||||| |
|
|
| T |
35110372 |
agattcaggacaaggagggcattcccccagaccagcagaggctcatttttgctggaaaacagcttgaagatggcagaactcttgctgattacaacatcca |
35110273 |
T |
|
| Q |
115 |
gaaagagagtacgcttcatctagttctgaggttgcgcggtgggatgcagatatttgtgaagacgttgaccgggaagacaattactctagaggtggagagt |
214 |
Q |
| |
|
||||||| || ||||| || || || | | || ||||| |||||||| ||||| ||||| | || || |||||||||||| | ||||| ||||| |
|
|
| T |
35110272 |
gaaagagtcaactcttcaccttgtcttgcgtcttcgtggtggtatgcagatttttgtaaagacccttacaggaaagacaattactttggaggttgagagc |
35110173 |
T |
|
| Q |
215 |
tctgatactattgataacgtgaaggccaagattcaggataaggagggcattccaccggatcagcagcgattgatctttgctgggaaacaacttgaggatg |
314 |
Q |
| |
|
|| || || ||||| || || ||||| ||||||||||| |||||||||||||| || || |||||| | | || |||||||| ||||| ||||| |||| |
|
|
| T |
35110172 |
tcggacacgattgacaatgtaaaggctaagattcaggacaaggagggcattcccccagaccagcagaggctcatttttgctggaaaacagcttgaagatg |
35110073 |
T |
|
| Q |
315 |
gaaggactcttgctgattataatattcagaaagagtctacgcttca |
360 |
Q |
| |
|
| || |||||||||||||| || || ||||||||||| || ||||| |
|
|
| T |
35110072 |
gcagaactcttgctgattacaacatccagaaagagtcaactcttca |
35110027 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 15 - 360
Target Start/End: Complemental strand, 35110600 - 35110255
Alignment:
| Q |
15 |
agattcaagacaaggaaggcattccaccggatcagcaacgattgatctttgcagggaagcagttggaagatggaagaactcttgcggattataatatcca |
114 |
Q |
| |
|
||||||| |||||||| |||||||| || || ||||| | | || ||||| || || ||| | |||||||| ||||||||||| ||||| || ||||| |
|
|
| T |
35110600 |
agattcaggacaaggagggcattcccccagaccagcagaggctcatttttgctggaaaacagcttgaagatggcagaactcttgctgattacaacatcca |
35110501 |
T |
|
| Q |
115 |
gaaagagagtacgcttcatctagttctgaggttgcgcggtgggatgcagatatttgtgaagacgttgaccgggaagacaattactctagaggtggagagt |
214 |
Q |
| |
|
||||||| || ||||| || || || | | || ||||| |||||||| ||||| ||||| | || || |||||||||||| | ||||| ||||| |
|
|
| T |
35110500 |
gaaagagtcaactcttcaccttgtcttgcgtcttcgtggtggtatgcagatttttgtaaagacccttacaggaaagacaattactttggaggttgagagc |
35110401 |
T |
|
| Q |
215 |
tctgatactattgataacgtgaaggccaagattcaggataaggagggcattccaccggatcagcagcgattgatctttgctgggaaacaacttgaggatg |
314 |
Q |
| |
|
|| || || ||||| || || ||||| ||||||||||| |||||||||||||| || || |||||| | | || |||||||| ||||| ||||| |||| |
|
|
| T |
35110400 |
tcggacacgattgacaatgtaaaggctaagattcaggacaaggagggcattcccccagaccagcagaggctcatttttgctggaaaacagcttgaagatg |
35110301 |
T |
|
| Q |
315 |
gaaggactcttgctgattataatattcagaaagagtctacgcttca |
360 |
Q |
| |
|
| || |||||||||||||| || || ||||||||||| || ||||| |
|
|
| T |
35110300 |
gcagaactcttgctgattacaacatccagaaagagtcaactcttca |
35110255 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 15 - 360
Target Start/End: Complemental strand, 35110828 - 35110483
Alignment:
| Q |
15 |
agattcaagacaaggaaggcattccaccggatcagcaacgattgatctttgcagggaagcagttggaagatggaagaactcttgcggattataatatcca |
114 |
Q |
| |
|
||||||| |||||||| |||||||| || || ||||| | | || ||||| || || ||| | |||||||| ||||||||||| ||||| || ||||| |
|
|
| T |
35110828 |
agattcaggacaaggagggcattcccccagaccagcagaggctcatttttgctggaaaacagcttgaagatggcagaactcttgctgattacaacatcca |
35110729 |
T |
|
| Q |
115 |
gaaagagagtacgcttcatctagttctgaggttgcgcggtgggatgcagatatttgtgaagacgttgaccgggaagacaattactctagaggtggagagt |
214 |
Q |
| |
|
||||||| || ||||| || || || | | || ||||| |||||||| ||||| ||||| | || || |||||||||||| | ||||| ||||| |
|
|
| T |
35110728 |
gaaagagtcaactcttcaccttgtcttgcgtcttcgtggtggtatgcagatttttgtaaagacccttacaggaaagacaattactttggaggttgagagc |
35110629 |
T |
|
| Q |
215 |
tctgatactattgataacgtgaaggccaagattcaggataaggagggcattccaccggatcagcagcgattgatctttgctgggaaacaacttgaggatg |
314 |
Q |
| |
|
|| || || ||||| || || ||||| ||||||||||| |||||||||||||| || || |||||| | | || |||||||| ||||| ||||| |||| |
|
|
| T |
35110628 |
tcggacacgattgacaatgtaaaggctaagattcaggacaaggagggcattcccccagaccagcagaggctcatttttgctggaaaacagcttgaagatg |
35110529 |
T |
|
| Q |
315 |
gaaggactcttgctgattataatattcagaaagagtctacgcttca |
360 |
Q |
| |
|
| || |||||||||||||| || || ||||||||||| || ||||| |
|
|
| T |
35110528 |
gcagaactcttgctgattacaacatccagaaagagtcaactcttca |
35110483 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 59 - 360
Target Start/End: Complemental strand, 35111012 - 35110711
Alignment:
| Q |
59 |
atctttgcagggaagcagttggaagatggaagaactcttgcggattataatatccagaaagagagtacgcttcatctagttctgaggttgcgcggtggga |
158 |
Q |
| |
|
|||||||| || || ||| | |||||||| ||||| | || |||||||| |||||||||||| || |||||||| ||| || | | || ||||| | |
|
|
| T |
35111012 |
atctttgctggaaaacagcttgaagatggcagaacattggccgattataacatccagaaagagtcaactcttcatctcgttttgcgacttcgtggtggta |
35110913 |
T |
|
| Q |
159 |
tgcagatatttgtgaagacgttgaccgggaagacaattactctagaggtggagagttctgatactattgataacgtgaaggccaagattcaggataagga |
258 |
Q |
| |
|
||||||| ||||| ||||| | || || |||||||||||| | ||||| ||||| || || || ||||| || || ||||| ||||||||||| ||||| |
|
|
| T |
35110912 |
tgcagatttttgtaaagacccttacaggaaagacaattactttggaggtagagagctcggacacgattgacaatgtaaaggctaagattcaggacaagga |
35110813 |
T |
|
| Q |
259 |
gggcattccaccggatcagcagcgattgatctttgctgggaaacaacttgaggatggaaggactcttgctgattataatattcagaaagagtctacgctt |
358 |
Q |
| |
|
||||||||| || || |||||| | | || |||||||| ||||| ||||| ||||| || |||||||||||||| || || ||||||||||| || ||| |
|
|
| T |
35110812 |
gggcattcccccagaccagcagaggctcatttttgctggaaaacagcttgaagatggcagaactcttgctgattacaacatccagaaagagtcaactctt |
35110713 |
T |
|
| Q |
359 |
ca |
360 |
Q |
| |
|
|| |
|
|
| T |
35110712 |
ca |
35110711 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 59 - 384
Target Start/End: Complemental strand, 31260123 - 31259798
Alignment:
| Q |
59 |
atctttgcagggaagcagttggaagatggaagaactcttgcggattataatatccagaaagagagtacgcttcatctagttctgaggttgcgcggtggga |
158 |
Q |
| |
|
|||||||| || |||||| | ||||||||||| || ||||| |||||||| |||||||| ||| || || ||| | ||| ||||| | || || || | |
|
|
| T |
31260123 |
atctttgctggtaagcagcttgaagatggaaggacacttgccgattataacatccagaaggagtccactctccatttggttttgaggcttcgtgggggta |
31260024 |
T |
|
| Q |
159 |
tgcagatatttgtgaagacgttgaccgggaagacaattactctagaggtggagagttctgatactattgataacgtgaaggccaagattcaggataagga |
258 |
Q |
| |
|
||||||| ||||| ||||| | || || ||||| || ||| | ||||| |||||||||||||| |||||||| |||||||| || ||||||||||| || |
|
|
| T |
31260023 |
tgcagatttttgttaagacccttactggaaagaccataactttggaggttgagagttctgatacaattgataatgtgaaggcaaaaattcaggataaaga |
31259924 |
T |
|
| Q |
259 |
gggcattccaccggatcagcagcgattgatctttgctgggaaacaacttgaggatggaaggactcttgctgattataatattcagaaagagtctacgctt |
358 |
Q |
| |
|
||||||||| || || |||||| || | || |||||||| || || | |||||||| | ||| | || ||||||||||| ||||| || ||||| | |
|
|
| T |
31259923 |
gggcattcctcctgaccagcagagactaatttttgctggaaagcagttggaggatggtcgtactttggccgattataatatccagaaggaatctactttg |
31259824 |
T |
|
| Q |
359 |
catctggttctcaggctccgtggtgg |
384 |
Q |
| |
|
||| ||||| | ||||| |||||||| |
|
|
| T |
31259823 |
catttggttttgaggcttcgtggtgg |
31259798 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 15 - 360
Target Start/End: Complemental strand, 35109916 - 35109571
Alignment:
| Q |
15 |
agattcaagacaaggaaggcattccaccggatcagcaacgattgatctttgcagggaagcagttggaagatggaagaactcttgcggattataatatcca |
114 |
Q |
| |
|
||||||| |||||||| |||||||| || || ||||| | | || ||||| || || ||| | |||||||| ||||||||||| ||||| || ||||| |
|
|
| T |
35109916 |
agattcaggacaaggagggcattcccccagaccagcagaggctcatttttgctggaaaacagcttgaagatggcagaactcttgctgattacaacatcca |
35109817 |
T |
|
| Q |
115 |
gaaagagagtacgcttcatctagttctgaggttgcgcggtgggatgcagatatttgtgaagacgttgaccgggaagacaattactctagaggtggagagt |
214 |
Q |
| |
|
||||||| || ||||| || || || | | || ||||| |||||||| ||||| ||||| | || || |||||||||||| | ||||| ||||| |
|
|
| T |
35109816 |
gaaagagtcaactcttcaccttgtcttgcgtcttcgtggtggtatgcagatttttgtaaagacccttacaggaaagacaattactttggaggttgagagc |
35109717 |
T |
|
| Q |
215 |
tctgatactattgataacgtgaaggccaagattcaggataaggagggcattccaccggatcagcagcgattgatctttgctgggaaacaacttgaggatg |
314 |
Q |
| |
|
|| || || ||||| || || ||||| ||||||||||| |||||||||||||| || || |||||| | | || |||||||| || || ||||| |||| |
|
|
| T |
35109716 |
tcggacacgattgacaatgtaaaggctaagattcaggacaaggagggcattcccccagaccagcagaggctcatttttgctggaaagcagcttgaagatg |
35109617 |
T |
|
| Q |
315 |
gaaggactcttgctgattataatattcagaaagagtctacgcttca |
360 |
Q |
| |
|
| || |||||||||||||| || || ||||||||||| || ||||| |
|
|
| T |
35109616 |
gcagaactcttgctgattacaacatccagaaagagtcgactcttca |
35109571 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 149 - 360
Target Start/End: Original strand, 36294318 - 36294529
Alignment:
| Q |
149 |
cgcggtgggatgcagatatttgtgaagacgttgaccgggaagacaattactctagaggtggagagttctgatactattgataacgtgaaggccaagattc |
248 |
Q |
| |
|
|||||||| |||||||| ||||| ||||| | || || |||||||||||| | ||||| ||||| || ||||| ||||| || || ||||| ||||||| |
|
|
| T |
36294318 |
cgcggtggtatgcagatttttgtaaagacccttacaggaaagacaattactttggaggtagagagctcagatacgattgacaatgtaaaggcaaagattc |
36294417 |
T |
|
| Q |
249 |
aggataaggagggcattccaccggatcagcagcgattgatctttgctgggaaacaacttgaggatggaaggactcttgctgattataatattcagaaaga |
348 |
Q |
| |
|
|||| || ||||| ||||| || ||||||||| | | || |||||||| || || ||||| ||||| || |||||||||||||| || || |||||||| |
|
|
| T |
36294418 |
aggacaaagagggtattcccccagatcagcagaggctcatttttgctggaaagcagcttgaagatggcagaactcttgctgattacaacatccagaaaga |
36294517 |
T |
|
| Q |
349 |
gtctacgcttca |
360 |
Q |
| |
|
||| || ||||| |
|
|
| T |
36294518 |
gtcaactcttca |
36294529 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 59 - 261
Target Start/End: Complemental strand, 31306551 - 31306349
Alignment:
| Q |
59 |
atctttgcagggaagcagttggaagatggaagaactcttgcggattataatatccagaaagagagtacgcttcatctagttctgaggttgcgcggtggga |
158 |
Q |
| |
|
||||||||||| || ||| | || |||||||||| || || |||||||| |||||||| || ||| |||||| | || || || ||| | ||||| | |
|
|
| T |
31306551 |
atctttgcaggtaaacagctcgaggatggaagaatcctagctgattataacatccagaaggaatctacccttcatttggtgcttagattgagaggtggaa |
31306452 |
T |
|
| Q |
159 |
tgcagatatttgtgaagacgttgaccgggaagacaattactctagaggtggagagttctgatactattgataacgtgaaggccaagattcaggataagga |
258 |
Q |
| |
|
||||||||||||| ||||| ||||| || ||||| |||||| | ||||| |||||||| |||||||||||||| ||||| || |||||||| || ||||| |
|
|
| T |
31306451 |
tgcagatatttgttaagactttgactggaaagactattactttggaggttgagagttcagatactattgataatgtgaaagctaagattcaagacaagga |
31306352 |
T |
|
| Q |
259 |
ggg |
261 |
Q |
| |
|
||| |
|
|
| T |
31306351 |
ggg |
31306349 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #24
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 218 - 366
Target Start/End: Complemental strand, 31260648 - 31260500
Alignment:
| Q |
218 |
gatactattgataacgtgaaggccaagattcaggataaggagggcattccaccggatcagcagcgattgatctttgctgggaaacaacttgaggatggaa |
317 |
Q |
| |
|
||||| |||||||| || |||||||||||||| || || ||||| || || || ||||||||| | | |||||||||||||||||||| |||||||||| |
|
|
| T |
31260648 |
gatacaattgataatgtcaaggccaagattcaagacaaagagggaatccctcctgatcagcagaggcttatctttgctgggaaacaactcgaggatggaa |
31260549 |
T |
|
| Q |
318 |
ggactcttgctgattataatattcagaaagagtctacgcttcatctggt |
366 |
Q |
| |
|
| || || ||||||||||| || ||||| || ||||| |||||| |||| |
|
|
| T |
31260548 |
gaaccctagctgattataacatccagaaggaatctacccttcatttggt |
31260500 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #25
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 15 - 315
Target Start/End: Original strand, 36293956 - 36294256
Alignment:
| Q |
15 |
agattcaagacaaggaaggcattccaccggatcagcaacgattgatctttgcagggaagcagttggaagatggaagaactcttgcggattataatatcca |
114 |
Q |
| |
|
||||||||||||||||||| || ||||| || ||||| || |||| ||||| || |||||| |||| ||||| | || ||||| |||||||| ||||| |
|
|
| T |
36293956 |
agattcaagacaaggaaggaatcccacctgaccagcagcgtctgatttttgctggaaagcagctggaggatgggcgtacccttgctgattataacatcca |
36294055 |
T |
|
| Q |
115 |
gaaagagagtacgcttcatctagttctgaggttgcgcggtgggatgcagatatttgtgaagacgttgaccgggaagacaattactctagaggtggagagt |
214 |
Q |
| |
|
||| ||| || || ||| | || || | | || ||||| ||||| |||||||||||||| | || || |||||||| || || ||||||||||| |
|
|
| T |
36294056 |
gaaggagtccaccctccatttggtgctccgtctccgtggtggtatgcaaatatttgtgaagactctcactggaaagacaatcacccttgaggtggagagc |
36294155 |
T |
|
| Q |
215 |
tctgatactattgataacgtgaaggccaagattcaggataaggagggcattccaccggatcagcagcgattgatctttgctgggaaacaacttgaggatg |
314 |
Q |
| |
|
|||||||| ||||| || || ||||||||||| ||||| || || || |||||||| || |||||| | | ||||||||||| ||||| ||||| |||| |
|
|
| T |
36294156 |
tctgataccattgacaatgttaaggccaagatacaggacaaagaaggtattccaccagaccagcagaggctcatctttgctggaaaacagcttgaagatg |
36294255 |
T |
|
| Q |
315 |
g |
315 |
Q |
| |
|
| |
|
|
| T |
36294256 |
g |
36294256 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 83 - 366
Target Start/End: Complemental strand, 31260555 - 31260272
Alignment:
| Q |
83 |
gatggaagaactcttgcggattataatatccagaaagagagtacgcttcatctagttctgaggttgcgcggtgggatgcagatatttgtgaagacgttga |
182 |
Q |
| |
|
||||||||||| || || |||||||| |||||||| || ||| |||||| | || || || ||| | ||||| ||||||||||| || ||||| |||| |
|
|
| T |
31260555 |
gatggaagaaccctagctgattataacatccagaaggaatctacccttcatttggtgcttagattgagaggtggaatgcagatattcgtaaagactttga |
31260456 |
T |
|
| Q |
183 |
ccgggaagacaattactctagaggtggagagttctgatactattgataacgtgaaggccaagattcaggataaggagggcattccaccggatcagcagcg |
282 |
Q |
| |
|
| || || || || || ||||||| || || ||||| |||||||| || ||||||||||| ||||| || ||||| || || || ||||||||| | |
|
|
| T |
31260455 |
ctggaaaaaccatcaccttagaggttgaatcctcggataccattgataatgtcaaggccaagatacaggacaaagagggtatccctcctgatcagcagag |
31260356 |
T |
|
| Q |
283 |
attgatctttgctgggaaacaacttgaggatggaaggactcttgctgattataatattcagaaagagtctacgcttcatctggt |
366 |
Q |
| |
|
| |||||||| ||||||||||| || ||||||||||| || ||||||||||| || ||||| || ||||| |||||| |||| |
|
|
| T |
31260355 |
gcttatctttgcagggaaacaactagaagatggaaggaccctagctgattataacatccagaaggaatctacccttcatttggt |
31260272 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 152 - 363
Target Start/End: Complemental strand, 35111147 - 35110936
Alignment:
| Q |
152 |
ggtgggatgcagatatttgtgaagacgttgaccgggaagacaattactctagaggtggagagttctgatactattgataacgtgaaggccaagattcagg |
251 |
Q |
| |
|
||||| ||||| |||||||||||||| | || || |||||||| || || ||||||||||| |||||||| ||||| || || ||||||||||| || | |
|
|
| T |
35111147 |
ggtggtatgcaaatatttgtgaagactctcactggaaagacaatcacccttgaggtggagagctctgataccattgacaatgttaaggccaagatacaag |
35111048 |
T |
|
| Q |
252 |
ataaggagggcattccaccggatcagcagcgattgatctttgctgggaaacaacttgaggatggaaggactcttgctgattataatattcagaaagagtc |
351 |
Q |
| |
|
| || ||||| || ||||| || |||||| | | ||||||||||| ||||| ||||| ||||| || || | || |||||||| || ||||||||||| |
|
|
| T |
35111047 |
acaaagagggtatcccaccagaccagcagaggctcatctttgctggaaaacagcttgaagatggcagaacattggccgattataacatccagaaagagtc |
35110948 |
T |
|
| Q |
352 |
tacgcttcatct |
363 |
Q |
| |
|
|| |||||||| |
|
|
| T |
35110947 |
aactcttcatct |
35110936 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #28
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 15 - 321
Target Start/End: Original strand, 36294640 - 36294946
Alignment:
| Q |
15 |
agattcaagacaaggaaggcattccaccggatcagcaacgattgatctttgcagggaagcagttggaagatggaagaactcttgcggattataatatcca |
114 |
Q |
| |
|
|||| ||||||||||| || ||||| || || |||||| | ||||| ||||| || ||||| | ||||| || ||||||| || |||||||||||||| |
|
|
| T |
36294640 |
agatacaagacaaggagggtattcccccagaccagcaaaggttgatttttgctggaaagcaacttgaagacggtcgaactctggctgattataatatcca |
36294739 |
T |
|
| Q |
115 |
gaaagagagtacgcttcatctagttctgaggttgcgcggtgggatgcagatatttgtgaagacgttgaccgggaagacaattactctagaggtggagagt |
214 |
Q |
| |
|
||||||| || |||||||| || || || | || ||||| |||||||| ||||| ||||| | || || || || |||||| | ||||| ||||| |
|
|
| T |
36294740 |
gaaagagtcgactcttcatcttgtcttgcggcttcgtggtggtatgcagatttttgttaagaccctaactggaaaaacgattactttggaggttgagagc |
36294839 |
T |
|
| Q |
215 |
tctgatactattgataacgtgaaggccaagattcaggataaggagggcattccaccggatcagcagcgattgatctttgctgggaaacaacttgaggatg |
314 |
Q |
| |
|
|| || || ||||| || || ||||| ||||||| ||| |||||||||||||| || || ||||| | ||||| |||||||| || || ||||| |||| |
|
|
| T |
36294840 |
tcagacacaattgacaatgtaaaggctaagattctggacaaggagggcattcctccagaccagcaaaggttgatttttgctggaaagcagcttgaagatg |
36294939 |
T |
|
| Q |
315 |
gaaggac |
321 |
Q |
| |
|
||||||| |
|
|
| T |
36294940 |
gaaggac |
36294946 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 59 - 280
Target Start/End: Complemental strand, 31287402 - 31287181
Alignment:
| Q |
59 |
atctttgcagggaagcagttggaagatggaagaactcttgcggattataatatccagaaagagagtacgcttcatctagttctgaggttgcgcggtggga |
158 |
Q |
| |
|
|||||||| || |||||| | ||||||||||| || ||||| |||||||| || || || || || || ||| | ||| ||||| | || ||||| | |
|
|
| T |
31287402 |
atctttgctggtaagcagcttgaagatggaaggacccttgctgattataacattcaaaaggaatcgaccctccatttggttttgaggcttcgtggtggta |
31287303 |
T |
|
| Q |
159 |
tgcagatatttgtgaagacgttgaccgggaagacaattactctagaggtggagagttctgatactattgataacgtgaaggccaagattcaggataagga |
258 |
Q |
| |
|
||||||| ||||||||||| | ||||| |||||||| ||| | ||||| || ||||||||||| ||||| |||||||| || ||||||||||| || || |
|
|
| T |
31287302 |
tgcagatttttgtgaagactcttaccggaaagacaataactttggaggttgaaagttctgatacaattgacaacgtgaaagcaaagattcaggacaaaga |
31287203 |
T |
|
| Q |
259 |
gggcattccaccggatcagcag |
280 |
Q |
| |
|
||||||||| || || |||||| |
|
|
| T |
31287202 |
gggcattcctccagaccagcag |
31287181 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 157 - 366
Target Start/End: Complemental strand, 31306681 - 31306472
Alignment:
| Q |
157 |
gatgcagatatttgtgaagacgttgaccgggaagacaattactctagaggtggagagttctgatactattgataacgtgaaggccaagattcaggataag |
256 |
Q |
| |
|
||||||||| |||||||| || ||||| || || || || ||||| ||||| |||||||| ||||| |||||||| || ||||||||||| || || || |
|
|
| T |
31306681 |
gatgcagatctttgtgaaaacattgacaggaaaaaccatcactcttgaggtagagagttccgatacaattgataatgtcaaggccaagatccaagacaaa |
31306582 |
T |
|
| Q |
257 |
gagggcattccaccggatcagcagcgattgatctttgctgggaaacaacttgaggatggaaggactcttgctgattataatattcagaaagagtctacgc |
356 |
Q |
| |
|
||||| || || || ||||||||| | | |||||||| || ||||| || ||||||||||| | || ||||||||||| || ||||| || ||||| | |
|
|
| T |
31306581 |
gagggtatccctcctgatcagcagaggcttatctttgcaggtaaacagctcgaggatggaagaatcctagctgattataacatccagaaggaatctaccc |
31306482 |
T |
|
| Q |
357 |
ttcatctggt |
366 |
Q |
| |
|
||||| |||| |
|
|
| T |
31306481 |
ttcatttggt |
31306472 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 227 - 360
Target Start/End: Complemental strand, 35100856 - 35100723
Alignment:
| Q |
227 |
gataacgtgaaggccaagattcaggataaggagggcattccaccggatcagcagcgattgatctttgctgggaaacaacttgaggatggaaggactcttg |
326 |
Q |
| |
|
||||| || ||||| || || |||||||||||||| || ||||| ||||||||| | ||||||||||||||||| || ||||| ||||| ||||| | | |
|
|
| T |
35100856 |
gataatgttaaggcaaaaatacaggataaggagggaatcccacctgatcagcagaggttgatctttgctgggaagcagcttgaagatggccggactttgg |
35100757 |
T |
|
| Q |
327 |
ctgattataatattcagaaagagtctacgcttca |
360 |
Q |
| |
|
| ||||| || ||||||||||||||||| ||||| |
|
|
| T |
35100756 |
ccgattacaacattcagaaagagtctacccttca |
35100723 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 188 - 385
Target Start/End: Original strand, 36293901 - 36294098
Alignment:
| Q |
188 |
aagacaattactctagaggtggagagttctgatactattgataacgtgaaggccaagattcaggataaggagggcattccaccggatcagcagcgattga |
287 |
Q |
| |
|
||||| || ||||| || || |||||||| ||||| || || || || ||||| |||||||| || ||||| || || ||||| || |||||||| ||| |
|
|
| T |
36293901 |
aagaccatcactctcgaagttgagagttcagataccatagacaatgttaaggcaaagattcaagacaaggaaggaatcccacctgaccagcagcgtctga |
36294000 |
T |
|
| Q |
288 |
tctttgctgggaaacaacttgaggatggaaggactcttgctgattataatattcagaaagagtctacgcttcatctggttctcaggctccgtggtggt |
385 |
Q |
| |
|
| |||||||| || || || |||||||| | || |||||||||||||| || ||||| ||||| || || ||| |||| ||| | |||||||||||| |
|
|
| T |
36294001 |
tttttgctggaaagcagctggaggatgggcgtacccttgctgattataacatccagaaggagtccaccctccatttggtgctccgtctccgtggtggt |
36294098 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 23 - 99
Target Start/End: Complemental strand, 35100604 - 35100528
Alignment:
| Q |
23 |
gacaaggaaggcattccaccggatcagcaacgattgatctttgcagggaagcagttggaagatggaagaactcttgc |
99 |
Q |
| |
|
||||||||||| || ||||| |||||||| | ||||||||||| |||||||| ||||| |||||||| || ||||| |
|
|
| T |
35100604 |
gacaaggaaggaatcccaccagatcagcagaggttgatctttgctgggaagcaattggaggatggaaggacccttgc |
35100528 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 23 - 99
Target Start/End: Complemental strand, 35108996 - 35108920
Alignment:
| Q |
23 |
gacaaggaaggcattccaccggatcagcaacgattgatctttgcagggaagcagttggaagatggaagaactcttgc |
99 |
Q |
| |
|
||||||||||| || ||||| |||||||| | ||||||||||| |||||||| ||||| |||||||| || ||||| |
|
|
| T |
35108996 |
gacaaggaaggaatcccaccagatcagcagaggttgatctttgctgggaagcaattggaggatggaaggacccttgc |
35108920 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 157 - 385
Target Start/End: Complemental strand, 35111370 - 35111142
Alignment:
| Q |
157 |
gatgcagatatttgtgaagacgttgaccgggaagacaattactctagaggtggagagttctgatactattgataacgtgaaggccaagattcaggataag |
256 |
Q |
| |
|
|||||| || ||||||||||| | || || |||||||| || || ||||||||||| || ||||| ||||| || || |||||||||||||| || || |
|
|
| T |
35111370 |
gatgcaaatctttgtgaagactctcacaggaaagacaatcacccttgaggtggagagctccgatacaattgacaatgttaaggccaagattcaagacaaa |
35111271 |
T |
|
| Q |
257 |
gagggcattccaccggatcagcagcgattgatctttgctgggaaacaacttgaggatggaaggactcttgctgattataatattcagaaagagtctacgc |
356 |
Q |
| |
|
|| || || || || || |||||||| |||| |||||||| || || || |||||| | | || |||||||||||||| || || || ||||| || | |
|
|
| T |
35111270 |
gaagggatccctccagaccagcagcgtctgatttttgctggcaagcagctggaggataggcgtacccttgctgattataacatccaaaaggagtccaccc |
35111171 |
T |
|
| Q |
357 |
ttcatctggttctcaggctccgtggtggt |
385 |
Q |
| |
|
| ||| |||| ||| | || ||||||||| |
|
|
| T |
35111170 |
tccatttggtgctccgtcttcgtggtggt |
35111142 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 157 - 279
Target Start/End: Complemental strand, 31288444 - 31288322
Alignment:
| Q |
157 |
gatgcagatatttgtgaagacgttgaccgggaagacaattactctagaggtggagagttctgatactattgataacgtgaaggccaagattcaggataag |
256 |
Q |
| |
|
|||||| || |||||||| || ||||| || || || || || || |||||||||||||||||||| || || ||||| || || |||||||| || ||| |
|
|
| T |
31288444 |
gatgcaaatctttgtgaaaacattgactggcaaaactatcaccctcgaggtggagagttctgataccatagacaacgttaaagctaagattcaagacaag |
31288345 |
T |
|
| Q |
257 |
gagggcattccaccggatcagca |
279 |
Q |
| |
|
|| || ||||| || |||||||| |
|
|
| T |
31288344 |
gaaggtattcctcccgatcagca |
31288322 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 35101941 - 35101844
Alignment:
| Q |
17 |
attcaagacaaggaaggcattccaccggatcagcaacgattgatctttgcagggaagcagttggaagatggaagaactcttgcggattataatatcca |
114 |
Q |
| |
|
||||||||||||||||| || ||||| || ||||| || |||| ||||| || ||||||||||| ||||| | || ||||| |||||||| ||||| |
|
|
| T |
35101941 |
attcaagacaaggaaggaatcccaccagaccagcagcgtctgatttttgctggcaagcagttggaggatgggcgtacccttgctgattataacatcca |
35101844 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 74; Significance: 1e-33; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 15 - 360
Target Start/End: Original strand, 47989935 - 47990280
Alignment:
| Q |
15 |
agattcaagacaaggaaggcattccaccggatcagcaacgattgatctttgcagggaagcagttggaagatggaagaactcttgcggattataatatcca |
114 |
Q |
| |
|
||||||||||||||||||| || ||||| || ||||| | | |||||||| || || ||| | |||||||| ||||| | || |||||||| ||||| |
|
|
| T |
47989935 |
agattcaagacaaggaagggatcccacctgaccagcagaggctcatctttgctggaaaacagcttgaagatggcagaacattggccgattataacatcca |
47990034 |
T |
|
| Q |
115 |
gaaagagagtacgcttcatctagttctgaggttgcgcggtgggatgcagatatttgtgaagacgttgaccgggaagacaattactctagaggtggagagt |
214 |
Q |
| |
|
||||||| || |||||||| ||| || | | || ||||| |||||||| ||||| || || | || || |||||||||||| | ||||| ||||| |
|
|
| T |
47990035 |
gaaagagtcaactcttcatctcgttttgcgacttcgtggtggtatgcagatttttgtaaaaacccttacaggaaagacaattactttggaggtagagagc |
47990134 |
T |
|
| Q |
215 |
tctgatactattgataacgtgaaggccaagattcaggataaggagggcattccaccggatcagcagcgattgatctttgctgggaaacaacttgaggatg |
314 |
Q |
| |
|
|| || || ||||| || || ||||| || || ||||| |||||||| || ||||| ||||||||| | ||||||||||||||||| ||| | ||||||| |
|
|
| T |
47990135 |
tcggacacgattgacaatgtaaaggctaaaatacaggacaaggagggaatcccaccagatcagcagaggttgatctttgctgggaagcaattggaggatg |
47990234 |
T |
|
| Q |
315 |
gaaggactcttgctgattataatattcagaaagagtctacgcttca |
360 |
Q |
| |
|
||||||| |||||||| || || |||||||| |||||||| ||||| |
|
|
| T |
47990235 |
gaaggacccttgctgactacaacattcagaaggagtctactcttca |
47990280 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 152 - 363
Target Start/End: Original strand, 47989844 - 47990055
Alignment:
| Q |
152 |
ggtgggatgcagatatttgtgaagacgttgaccgggaagacaattactctagaggtggagagttctgatactattgataacgtgaaggccaagattcagg |
251 |
Q |
| |
|
||||||||||| || ||||||||||| | || || || ||||| ||||| ||||||||||| || ||||| ||||| || || |||||||||||||| | |
|
|
| T |
47989844 |
ggtgggatgcaaatctttgtgaagactctcacaggaaaaacaatcactcttgaggtggagagctccgatacaattgacaatgtcaaggccaagattcaag |
47989943 |
T |
|
| Q |
252 |
ataaggagggcattccaccggatcagcagcgattgatctttgctgggaaacaacttgaggatggaaggactcttgctgattataatattcagaaagagtc |
351 |
Q |
| |
|
| ||||| || || ||||| || |||||| | | ||||||||||| ||||| ||||| ||||| || || | || |||||||| || ||||||||||| |
|
|
| T |
47989944 |
acaaggaagggatcccacctgaccagcagaggctcatctttgctggaaaacagcttgaagatggcagaacattggccgattataacatccagaaagagtc |
47990043 |
T |
|
| Q |
352 |
tacgcttcatct |
363 |
Q |
| |
|
|| |||||||| |
|
|
| T |
47990044 |
aactcttcatct |
47990055 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 263 - 381
Target Start/End: Complemental strand, 42609569 - 42609451
Alignment:
| Q |
263 |
attccaccggatcagcagcgattgatctttgctgggaaacaacttgaggatggaaggactcttgctgattataatattcagaaagagtctacgcttcatc |
362 |
Q |
| |
|
|||||||||||||||||||||||||| || ||||| || || ||||| |||||| | || | |||||||| ||||| ||||| || || || ||||||| |
|
|
| T |
42609569 |
attccaccggatcagcagcgattgattttcgctggtaagcagcttgaagatggacgcaccttagctgattacaatatccagaaggaatcgactcttcatc |
42609470 |
T |
|
| Q |
363 |
tggttctcaggctccgtgg |
381 |
Q |
| |
|
| ||||||||||| ||||| |
|
|
| T |
42609469 |
tcgttctcaggcttcgtgg |
42609451 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 258
Target Start/End: Original strand, 47989621 - 47989722
Alignment:
| Q |
157 |
gatgcagatatttgtgaagacgttgaccgggaagacaattactctagaggtggagagttctgatactattgataacgtgaaggccaagattcaggataag |
256 |
Q |
| |
|
|||||| || ||||||||||| | || || |||||||| || || ||||||||||| || ||||| ||||| || || |||||||||||||| || ||| |
|
|
| T |
47989621 |
gatgcaaatctttgtgaagactctcacaggaaagacaatcacccttgaggtggagagctccgatacaattgacaatgttaaggccaagattcaagacaag |
47989720 |
T |
|
| Q |
257 |
ga |
258 |
Q |
| |
|
|| |
|
|
| T |
47989721 |
ga |
47989722 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 68; Significance: 4e-30; HSPs: 4)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 101 - 360
Target Start/End: Original strand, 24039710 - 24039969
Alignment:
| Q |
101 |
gattataatatccagaaagagagtacgcttcatctagttctgaggttgcgcggtgggatgcagatatttgtgaagacgttgaccgggaagacaattactc |
200 |
Q |
| |
|
||||||||||||||||| || || |||||||| ||||| | ||| | || || |||||||| ||||||||||| ||||| || ||||| ||||| |
|
|
| T |
24039710 |
gattataatatccagaaggaatccacccttcatcttgttcttcgtttgaggggaggtatgcagatctttgtgaagactttgacaggaaagaccattacat |
24039809 |
T |
|
| Q |
201 |
tagaggtggagagttctgatactattgataacgtgaaggccaagattcaggataaggagggcattccaccggatcagcagcgattgatctttgctgggaa |
300 |
Q |
| |
|
| |||||||| ||||| || || |||||||| || ||||| || || ||||| ||||| || || ||||| ||||| ||| | ||||||||||||||||| |
|
|
| T |
24039810 |
tggaggtggaaagttcagacaccattgataatgttaaggcaaaaatccaggacaaggaaggaatcccaccagatcaacagaggttgatctttgctgggaa |
24039909 |
T |
|
| Q |
301 |
acaacttgaggatggaaggactcttgctgattataatattcagaaagagtctacgcttca |
360 |
Q |
| |
|
||| | ||||||||||| || |||||||| || || ||||||||||||||||| ||||| |
|
|
| T |
24039910 |
gcaattggaggatggaagaacccttgctgactacaacattcagaaagagtctactcttca |
24039969 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 62 - 369
Target Start/End: Original strand, 24039444 - 24039750
Alignment:
| Q |
62 |
tttgcagggaagcagttggaagatggaagaactcttgcggattataatatccagaaagagagtacgcttcatctagttctgaggttgcgcggtgggatgc |
161 |
Q |
| |
|
||||| || |||||| | |||||||| ||||||||||| ||||| || ||||| |||||| || ||||| || || || | | || ||||| |||| |
|
|
| T |
24039444 |
tttgctggaaagcagcttgaagatggcagaactcttgccgattacaacatccaaaaagagtcaactcttcaccttgtcttgcgccttcgtggtggtatgc |
24039543 |
T |
|
| Q |
162 |
agatatttgtgaagacgttgaccgggaagacaattactctagaggtggagagttctgatactattgataacgtgaaggccaagattcaggataaggaggg |
261 |
Q |
| |
|
|||| ||||||||||| | ||||| || ||||||||| | ||||| ||||| || ||||||||||| || |||||||||||||| ||||| |||||||| |
|
|
| T |
24039544 |
agatttttgtgaagaccctcaccggaaaaacaattactttggaggtagagagctcagatactattgacaatgtgaaggccaagatacaggacaaggaggg |
24039643 |
T |
|
| Q |
262 |
cattccaccggatcagcagcgattgatctttgctgggaaacaacttgaggatggaaggactcttgctgattataatattcagaaagagtctacgcttcat |
361 |
Q |
| |
|
| ||| || || ||||| | ||||| || ||||| || || ||||| ||||| ||||| | |||||||||||||| ||||| || || || |||||| |
|
|
| T |
24039644 |
ta-tcccccagaccagcaaaggttgattttcgctggaaagcagcttgaagatggcaggacattggctgattataatatccagaaggaatccacccttcat |
24039742 |
T |
|
| Q |
362 |
ctggttct |
369 |
Q |
| |
|
|| ||||| |
|
|
| T |
24039743 |
cttgttct |
24039750 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 152 - 360
Target Start/End: Original strand, 24039306 - 24039514
Alignment:
| Q |
152 |
ggtgggatgcagatatttgtgaagacgttgaccgggaagacaattactctagaggtggagagttctgatactattgataacgtgaaggccaagattcagg |
251 |
Q |
| |
|
||||||||||| || || || ||||| | || || |||||||| || || ||||||||||| ||||||||||||||||| || || ||||||||||||| |
|
|
| T |
24039306 |
ggtgggatgcaaatcttcgtcaagactctcactggaaagacaatcacccttgaggtggagagctctgatactattgataatgtcaaagccaagattcagg |
24039405 |
T |
|
| Q |
252 |
ataaggagggcattccaccggatcagcagcgattgatctttgctgggaaacaacttgaggatggaaggactcttgctgattataatattcagaaagagtc |
351 |
Q |
| |
|
| |||||||| || || || || |||||| | | || |||||||| || || ||||| ||||| || |||||||| ||||| || || || |||||||| |
|
|
| T |
24039406 |
acaaggagggtatccccccagaccagcagaggctcatttttgctggaaagcagcttgaagatggcagaactcttgccgattacaacatccaaaaagagtc |
24039505 |
T |
|
| Q |
352 |
tacgcttca |
360 |
Q |
| |
|
|| ||||| |
|
|
| T |
24039506 |
aactcttca |
24039514 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 23 - 121
Target Start/End: Original strand, 24039860 - 24039958
Alignment:
| Q |
23 |
gacaaggaaggcattccaccggatcagcaacgattgatctttgcagggaagcagttggaagatggaagaactcttgcggattataatatccagaaagag |
121 |
Q |
| |
|
||||||||||| || ||||| ||||| || | ||||||||||| |||||||| ||||| ||||||||||| ||||| || || || || ||||||||| |
|
|
| T |
24039860 |
gacaaggaaggaatcccaccagatcaacagaggttgatctttgctgggaagcaattggaggatggaagaacccttgctgactacaacattcagaaagag |
24039958 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0971 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0971
Description:
Target: scaffold0971; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 266 - 318
Target Start/End: Original strand, 115 - 167
Alignment:
| Q |
266 |
ccaccggatcagcagcgattgatctttgctgggaaacaacttgaggatggaag |
318 |
Q |
| |
|
||||||||||||| ||| ||||| |||||||| ||||| ||||| |||||||| |
|
|
| T |
115 |
ccaccggatcagcggcgtttgatttttgctggaaaacagcttgaagatggaag |
167 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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