View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19360_low_15 (Length: 374)
Name: NF19360_low_15
Description: NF19360
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19360_low_15 |
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Alignment Details
Target: chr6 (Bit Score: 289; Significance: 1e-162; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 19 - 364
Target Start/End: Original strand, 14734985 - 14735325
Alignment:
| Q |
19 |
aagtggcgcaccggaaattgattagtaagaagtttaaggaatacgcaaattcttggaccttggaataggagtttcatatatgagataggataagtagcgg |
118 |
Q |
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| T |
14734985 |
aagtggcgcagtggaaattgattagtaagaagtttaaggaatacgcaaattcttggaccttggaataggagtttcat----gagataggataagtagccg |
14735080 |
T |
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| Q |
119 |
ttagtcaagcgcttagccatttctagtgagaagtattgagagatgagcaagaaattcttgaagcaccaggttcaaaatgatgggactcgagtaaaattgg |
218 |
Q |
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| T |
14735081 |
ttagtcaagcggttagccatttctagtgagaagtattgagagatgagtaagaaattcttgaagcaccaggttcaaaatgatgggactcgagtaaaactgg |
14735180 |
T |
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| Q |
219 |
aatcaccactggtatggtctttgattttcttagttcactgactttaagtataaacaaaaaatgtcagccggttagaaaagagttcggtgtgagacaacgt |
318 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
14735181 |
aatcaccactggtatggtctttgattttcttagttcactgactttaagtataaacaaaaaatgtcagccggttagaaaagagttcggtgtgag-caacgt |
14735279 |
T |
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| Q |
319 |
ggttttctaagttttgtgtagacgtgattatctccacaaccctatg |
364 |
Q |
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|||||||||||||||||||||| ||||||||||||||||| ||||| |
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| T |
14735280 |
ggttttctaagttttgtgtagatgtgattatctccacaactctatg |
14735325 |
T |
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