View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19360_low_20 (Length: 332)
Name: NF19360_low_20
Description: NF19360
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19360_low_20 |
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Alignment Details
Target: chr6 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 1 - 321
Target Start/End: Original strand, 14735296 - 14735608
Alignment:
| Q |
1 |
tgtagacgtgattatctccacaactctatgttttgcttgattaacttgttaattcttgccataatgatgaattaaggt---tacgtgatttctagactcg |
97 |
Q |
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| T |
14735296 |
tgtagatgtgattatctccacaactctatgttttgcttgattaacttgttaattcttgccataatgatgaattaaggtgtttacgtgatttctagactcg |
14735395 |
T |
|
| Q |
98 |
atacgtgcatttgggtacttggaattgatgttttgagctaagatacgaattctacaggtcctgctctgtcctaactcgcttaaagcaagctaaactgacc |
197 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
14735396 |
atacgtgcatttgggtacttggaattgatgttttgagctaagatacgaattctacaggtcctgctctgtcctaactcgcttaaagcaagctaaactgacc |
14735495 |
T |
|
| Q |
198 |
tggagcgagtaaactccagagagaactagcctgaagcgagtcaggagcgagtaactagcttataactcgcatggagtgagttttgacagcacagttgtgt |
297 |
Q |
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||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
14735496 |
tggagcgagtaaactccagagagaactcgcctga-----------agcgagtaactagcttataactcgcatggagtgagttttgacagcacagttgtgt |
14735584 |
T |
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| Q |
298 |
tgtcgacttgttccgtagttctgt |
321 |
Q |
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|||||||| ||||||||||||||| |
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| T |
14735585 |
tgtcgactcgttccgtagttctgt |
14735608 |
T |
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