View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19360_low_31 (Length: 252)
Name: NF19360_low_31
Description: NF19360
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19360_low_31 |
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Alignment Details
Target: chr8 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 27522156 - 27521934
Alignment:
| Q |
1 |
gaatgaacttgaccttaccctggaaccattgtatacctgccatcttggatgcttttgatgaaaaccttattaaaggtggatggtattatcaatatatata |
100 |
Q |
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| T |
27522156 |
gaatgaacttgaccttaccctggaaccattgtatacctgccatcttggatgcttttgatgaaaaccttattaaaggtggatggtattatcaatatatata |
27522057 |
T |
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| Q |
101 |
tttagctctatgttttgtagtttccctattttgaagacgctattagtgtactgtaagcttaattataacttaattataaggtcctaagtggaattaagct |
200 |
Q |
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| T |
27522056 |
tttggctctatgttttgtagtttccctattttgaagacgctaatagtgtactgtaagcttaatt-----------ataaggtcctaagtggaattaagct |
27521968 |
T |
|
| Q |
201 |
tttctatgtattaattatttatatagcttaaagg |
234 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
27521967 |
tttctatgtattaattatttatatagcttaaagg |
27521934 |
T |
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