View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19361_high_16 (Length: 409)
Name: NF19361_high_16
Description: NF19361
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19361_high_16 |
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Alignment Details
Target: chr7 (Bit Score: 294; Significance: 1e-165; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 59 - 393
Target Start/End: Complemental strand, 30346206 - 30345880
Alignment:
| Q |
59 |
ataaatcttactataatatcattagatcaaatgtgatatgacgtgacttgttgatctaataagtagaaaatttatctgcacatggtgcagtacaagtgct |
158 |
Q |
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| T |
30346206 |
ataagtcttactataatatcattagatcaaatgtgatatgacgtgacttgttgatctaataagtagaaaatttatctgcgcatggtgcagtacaagtgct |
30346107 |
T |
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| Q |
159 |
gatttcctctaatagtaatgcttactaactactaaagtcactgagcactagaagaatgtacagaggaataatagaagtgctacaaattaaaaacttgtgt |
258 |
Q |
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|||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30346106 |
gatttcctctaatagtaatgcttactaa--------gtcactaagcactagaagaatgtacagaggaataatagaagtgctacaaattaaaaacttgtgt |
30346015 |
T |
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| Q |
259 |
caaagcttccttgatgtacacgcccttaagcatcaagattcaagacaattaggtgagtcatgtgctcctgtgtcatatatacaaacgtatgacagtatag |
358 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30346014 |
caaagcttccttgatgtacacgcccttaagcatcaagattcaagacaattaggtgagtcatgtgctcctgtgtcatatatacaaacgtatgacagtatag |
30345915 |
T |
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| Q |
359 |
actaatctaaacgtttcaactttccctcaagtagg |
393 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
30345914 |
actaatctaaacgtttcaactttccctcaagtagg |
30345880 |
T |
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