View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19362_low_8 (Length: 249)
Name: NF19362_low_8
Description: NF19362
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19362_low_8 |
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Alignment Details
Target: chr2 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 26297742 - 26297512
Alignment:
| Q |
1 |
cggattaactcggcgtcggagtcggagacggagacataagcggagtgaagagagtcggagagtttgagaaagtagccggtggcgggttgaaatgtgtctt |
100 |
Q |
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| T |
26297742 |
cggattaactcggcgtcggagtcggagacggagacataagcggagtgaagagagtcggagagtttgagaaagtagccggtggcgggttgaaatgtgtctt |
26297643 |
T |
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| Q |
101 |
ctgaaagacgagggatgatttcagtaacttgaaggagtggttgacggtgggagtttgttgaagtggagttttggagaagttttgagaggactccaggggt |
200 |
Q |
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||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26297642 |
ctgaaagacgagggatgatttcagttacttgaaggagtggttgacggtgggtgtttgttgaagtggagttttggagaagttttgagaggactccaggggt |
26297543 |
T |
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| Q |
201 |
tagagacgccattgttgtaaggaatagctct |
231 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
26297542 |
tagagacgccattgttgtaaggaatagctct |
26297512 |
T |
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