View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19363_low_6 (Length: 255)
Name: NF19363_low_6
Description: NF19363
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19363_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 25856856 - 25856617
Alignment:
| Q |
1 |
atgttcaaatttgatatatactctatcaatttaaataataaatattgattttttcccnnnnnnnnn---cactggtcagttataatgagagttcatttga |
97 |
Q |
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| T |
25856856 |
atgttcaaatttgatatatactctatcaatttaaataataaatattgattttttcccaaaaaaaaaaaacaccggtcagttataatgagagttcatttga |
25856757 |
T |
|
| Q |
98 |
cacaataaaaggaaggaacacttacataattgatcgaactttcattgtgtttttgtcatattttccttctcgattcaattcaaagatgatattttccatc |
197 |
Q |
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|||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25856756 |
cacaatgaaaggaaggaacactaacataattgatcgaactttcattgtgtttttgtcatattttccttctcgattcaattcaaagatgatattttccatc |
25856657 |
T |
|
| Q |
198 |
tcattatttgtacaaggctaaactttaacttctctatatt |
237 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
25856656 |
tcattatttgtacaaggctaaactttaacttctctatatt |
25856617 |
T |
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