View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19365_low_1 (Length: 660)

Name: NF19365_low_1
Description: NF19365
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19365_low_1
NF19365_low_1
[»] chr5 (54 HSPs)
chr5 (7-642)||(11095024-11095656)
chr5 (129-197)||(38047850-38047918)
chr5 (22-97)||(36638644-36638719)
chr5 (63-106)||(37063162-37063205)
chr5 (52-106)||(20982223-20982277)
chr5 (161-239)||(10125650-10125725)
chr5 (21-105)||(40499764-40499848)
chr5 (63-106)||(7096215-7096258)
chr5 (63-106)||(28586854-28586897)
chr5 (64-253)||(42646855-42647042)
chr5 (152-206)||(4273339-4273393)
chr5 (43-101)||(13224348-13224406)
chr5 (206-260)||(29013112-29013166)
chr5 (52-106)||(32172581-32172635)
chr5 (61-103)||(34975315-34975357)
chr5 (52-106)||(35095871-35095925)
chr5 (52-106)||(35135750-35135804)
chr5 (163-253)||(10640019-10640105)
chr5 (63-161)||(16889674-16889774)
chr5 (206-251)||(39257314-39257359)
chr5 (63-103)||(6593239-6593279)
chr5 (70-106)||(10303747-10303783)
chr5 (63-103)||(12407752-12407792)
chr5 (63-150)||(35960353-35960441)
chr5 (163-252)||(41419385-41419470)
chr5 (68-103)||(7853602-7853637)
chr5 (63-106)||(11667102-11667145)
chr5 (152-195)||(14364276-14364319)
chr5 (118-161)||(37588391-37588434)
chr5 (63-106)||(39128578-39128621)
chr5 (52-106)||(9860886-9860940)
chr5 (41-103)||(19460039-19460101)
chr5 (206-260)||(24085127-24085181)
chr5 (63-105)||(34690813-34690855)
chr5 (63-156)||(41534381-41534475)
chr5 (165-252)||(41534506-41534589)
chr5 (63-107)||(3970767-3970812)
chr5 (152-197)||(10280570-10280614)
chr5 (63-100)||(12460094-12460131)
chr5 (74-152)||(14295456-14295536)
chr5 (125-174)||(17756386-17756435)
chr5 (52-101)||(26516226-26516275)
chr5 (61-106)||(29117018-29117063)
chr5 (63-103)||(11054125-11054165)
chr5 (206-250)||(11615575-11615619)
chr5 (63-103)||(11835216-11835256)
chr5 (52-104)||(19177407-19177459)
chr5 (66-106)||(28578834-28578874)
chr5 (41-105)||(29115302-29115366)
chr5 (74-106)||(29590828-29590860)
chr5 (154-206)||(32172709-32172761)
chr5 (152-180)||(38338377-38338405)
chr5 (62-106)||(40097147-40097191)
chr5 (152-180)||(41957439-41957467)
[»] chr2 (45 HSPs)
chr2 (52-260)||(28803441-28803648)
chr2 (19-151)||(17952742-17952876)
chr2 (63-197)||(10143111-10143247)
chr2 (155-252)||(4350747-4350841)
chr2 (154-252)||(787388-787483)
chr2 (154-206)||(1801724-1801776)
chr2 (63-106)||(37033983-37034026)
chr2 (168-253)||(40400818-40400900)
chr2 (47-101)||(10190202-10190256)
chr2 (52-106)||(31461366-31461420)
chr2 (20-139)||(10150651-10150772)
chr2 (63-104)||(12215746-12215787)
chr2 (52-113)||(13864578-13864639)
chr2 (63-107)||(25609735-25609779)
chr2 (21-85)||(26484193-26484257)
chr2 (63-103)||(30990460-30990500)
chr2 (41-105)||(34339040-34339104)
chr2 (129-189)||(40776076-40776136)
chr2 (63-106)||(5045245-5045288)
chr2 (63-102)||(5133711-5133750)
chr2 (63-106)||(13866828-13866871)
chr2 (22-98)||(21280489-21280567)
chr2 (63-106)||(32098396-32098439)
chr2 (63-106)||(38239639-38239682)
chr2 (154-239)||(43985265-43985347)
chr2 (155-197)||(1494417-1494459)
chr2 (63-101)||(26522717-26522755)
chr2 (206-240)||(29430863-29430897)
chr2 (125-171)||(32757483-32757529)
chr2 (52-106)||(33197327-33197381)
chr2 (52-106)||(35329907-35329961)
chr2 (52-106)||(35459838-35459892)
chr2 (52-106)||(37053522-37053576)
chr2 (210-252)||(40837356-40837398)
chr2 (155-258)||(8017491-8017591)
chr2 (146-195)||(12785911-12785960)
chr2 (83-153)||(40145421-40145492)
chr2 (65-106)||(40837516-40837557)
chr2 (63-104)||(41240967-41241008)
chr2 (63-100)||(41809337-41809374)
chr2 (54-106)||(14277982-14278034)
chr2 (154-198)||(16398441-16398485)
chr2 (63-106)||(31740047-31740091)
chr2 (47-103)||(33267607-33267663)
chr2 (154-198)||(41851134-41851178)
[»] chr8 (29 HSPs)
chr8 (63-206)||(34770831-34770976)
chr8 (52-190)||(14482130-14482269)
chr8 (158-239)||(29973212-29973294)
chr8 (62-255)||(31915209-31915401)
chr8 (64-106)||(39392749-39392791)
chr8 (20-106)||(40356767-40356853)
chr8 (503-576)||(30276575-30276648)
chr8 (63-141)||(42597340-42597420)
chr8 (152-253)||(16162814-16162912)
chr8 (129-174)||(9912807-9912852)
chr8 (63-103)||(26215435-26215475)
chr8 (55-159)||(27754334-27754441)
chr8 (63-102)||(3936788-3936827)
chr8 (41-104)||(5226519-5226582)
chr8 (55-106)||(7008558-7008609)
chr8 (63-106)||(8062254-8062297)
chr8 (154-197)||(30987962-30988005)
chr8 (118-239)||(43393704-43393822)
chr8 (152-206)||(11569419-11569473)
chr8 (164-206)||(35534574-35534616)
chr8 (65-106)||(1470944-1470985)
chr8 (75-144)||(4762462-4762531)
chr8 (154-253)||(6875440-6875536)
chr8 (41-106)||(34563167-34563232)
chr8 (19-103)||(42568710-42568792)
chr8 (129-177)||(2107344-2107392)
chr8 (63-103)||(4558737-4558777)
chr8 (156-204)||(10722682-10722730)
chr8 (154-206)||(11415210-11415262)
[»] chr6 (35 HSPs)
chr6 (131-249)||(27857391-27857506)
chr6 (75-144)||(4006665-4006736)
chr6 (154-206)||(3738125-3738177)
chr6 (152-260)||(31624312-31624419)
chr6 (206-257)||(10016728-10016779)
chr6 (52-106)||(7713953-7714007)
chr6 (52-150)||(32975906-32976006)
chr6 (63-103)||(507159-507199)
chr6 (154-190)||(2767727-2767763)
chr6 (65-101)||(7354145-7354181)
chr6 (54-106)||(20671953-20672005)
chr6 (66-106)||(29269838-29269878)
chr6 (63-106)||(2456891-2456933)
chr6 (63-106)||(2514641-2514684)
chr6 (63-106)||(4420556-4420599)
chr6 (52-103)||(8349755-8349806)
chr6 (63-106)||(24774697-24774740)
chr6 (63-106)||(24836287-24836330)
chr6 (63-106)||(29274317-29274360)
chr6 (63-106)||(33787833-33787876)
chr6 (52-106)||(4248886-4248940)
chr6 (52-106)||(13360663-13360717)
chr6 (52-106)||(35095015-35095069)
chr6 (152-193)||(740861-740902)
chr6 (53-106)||(6654544-6654597)
chr6 (41-106)||(9732393-9732458)
chr6 (69-98)||(11784131-11784160)
chr6 (166-206)||(7446615-7446655)
chr6 (158-240)||(8420128-8420207)
chr6 (118-174)||(9041454-9041510)
chr6 (67-107)||(21959671-21959711)
chr6 (67-107)||(29940739-29940779)
chr6 (74-106)||(30865432-30865464)
chr6 (154-206)||(32917253-32917305)
chr6 (207-255)||(33068518-33068566)
[»] chr3 (43 HSPs)
chr3 (63-161)||(49465696-49465794)
chr3 (118-239)||(21872227-21872345)
chr3 (52-158)||(1816510-1816619)
chr3 (63-144)||(40122801-40122883)
chr3 (152-201)||(54180747-54180796)
chr3 (118-206)||(2100141-2100229)
chr3 (20-112)||(41159005-41159097)
chr3 (52-107)||(905057-905112)
chr3 (118-161)||(32582740-32582783)
chr3 (52-107)||(41028938-41028993)
chr3 (152-253)||(44014716-44014814)
chr3 (64-106)||(1395611-1395653)
chr3 (65-106)||(22232767-22232808)
chr3 (41-106)||(38462198-38462263)
chr3 (152-197)||(42817193-42817238)
chr3 (63-103)||(2128342-2128382)
chr3 (67-151)||(21865521-21865605)
chr3 (154-206)||(22748154-22748206)
chr3 (67-159)||(34254841-34254936)
chr3 (118-161)||(14548752-14548795)
chr3 (63-106)||(20192694-20192737)
chr3 (64-103)||(22214772-22214811)
chr3 (63-106)||(23793528-23793570)
chr3 (63-106)||(34958267-34958310)
chr3 (135-206)||(43046703-43046774)
chr3 (65-103)||(33882969-33883007)
chr3 (152-206)||(34707458-34707512)
chr3 (214-252)||(36832207-36832245)
chr3 (64-106)||(42084339-42084381)
chr3 (52-106)||(44374732-44374786)
chr3 (68-106)||(49587004-49587042)
chr3 (158-230)||(53735913-53735982)
chr3 (152-197)||(37273188-37273233)
chr3 (61-106)||(48364967-48365012)
chr3 (11-104)||(48588552-48588645)
chr3 (152-180)||(1217788-1217816)
chr3 (55-99)||(2304336-2304380)
chr3 (214-250)||(18405752-18405788)
chr3 (214-250)||(24158437-24158473)
chr3 (63-103)||(35394792-35394832)
chr3 (63-103)||(36445671-36445711)
chr3 (152-196)||(41724266-41724310)
chr3 (66-159)||(44061056-44061151)
[»] chr7 (47 HSPs)
chr7 (65-178)||(28340410-28340525)
chr7 (125-190)||(29574603-29574668)
chr7 (19-102)||(7513529-7513612)
chr7 (19-161)||(46056041-46056183)
chr7 (152-206)||(36537962-36538016)
chr7 (75-199)||(39591467-39591586)
chr7 (63-106)||(1417203-1417246)
chr7 (155-206)||(27626085-27626136)
chr7 (63-106)||(30496643-30496686)
chr7 (155-239)||(20547322-20547403)
chr7 (69-106)||(1792438-1792475)
chr7 (69-106)||(43318616-43318653)
chr7 (118-206)||(27517267-27517355)
chr7 (65-105)||(28178910-28178950)
chr7 (154-206)||(36598318-36598370)
chr7 (66-113)||(25511569-25511616)
chr7 (63-106)||(27121674-27121717)
chr7 (131-206)||(27508294-27508369)
chr7 (63-106)||(31341133-31341176)
chr7 (63-106)||(35536046-35536089)
chr7 (63-106)||(35808992-35809035)
chr7 (63-106)||(42656454-42656497)
chr7 (46-101)||(47006970-47007025)
chr7 (63-106)||(49060479-49060522)
chr7 (72-106)||(2999139-2999173)
chr7 (64-106)||(5006597-5006639)
chr7 (63-105)||(5272909-5272951)
chr7 (152-198)||(6857309-6857355)
chr7 (52-106)||(7244630-7244684)
chr7 (52-106)||(24973872-24973926)
chr7 (152-252)||(33894681-33894778)
chr7 (63-101)||(36874058-36874096)
chr7 (129-159)||(44821966-44821996)
chr7 (41-106)||(753292-753357)
chr7 (65-102)||(2727452-2727489)
chr7 (154-253)||(3610658-3610754)
chr7 (214-267)||(3968535-3968588)
chr7 (63-104)||(5373164-5373205)
chr7 (53-106)||(27481382-27481435)
chr7 (63-100)||(33894562-33894599)
chr7 (66-103)||(43152993-43153030)
chr7 (19-88)||(48496599-48496667)
chr7 (54-106)||(2223078-2223130)
chr7 (155-199)||(30134106-30134150)
chr7 (125-161)||(39505959-39505995)
chr7 (52-104)||(46213731-46213783)
chr7 (208-256)||(47046023-47046071)
[»] chr4 (48 HSPs)
chr4 (64-159)||(11802475-11802571)
chr4 (128-180)||(7730630-7730682)
chr4 (52-144)||(18630608-18630702)
chr4 (152-206)||(19304980-19305034)
chr4 (129-172)||(8147899-8147942)
chr4 (19-106)||(19422313-19422400)
chr4 (63-106)||(21593099-21593142)
chr4 (63-106)||(51044547-51044590)
chr4 (48-106)||(4071807-4071864)
chr4 (152-256)||(28615389-28615489)
chr4 (52-98)||(45128406-45128452)
chr4 (52-106)||(47970246-47970300)
chr4 (52-106)||(54325125-54325179)
chr4 (27-142)||(24160545-24160662)
chr4 (63-103)||(6364088-6364128)
chr4 (128-168)||(11262787-11262827)
chr4 (63-103)||(21683570-21683610)
chr4 (63-103)||(30338683-30338723)
chr4 (66-106)||(54277402-54277442)
chr4 (64-144)||(3155543-3155625)
chr4 (52-106)||(4191667-4191722)
chr4 (67-106)||(20936090-20936129)
chr4 (63-106)||(42321967-42322010)
chr4 (20-102)||(14011130-14011212)
chr4 (66-104)||(24929435-24929473)
chr4 (63-105)||(25487634-25487676)
chr4 (52-106)||(36734821-36734875)
chr4 (52-159)||(44319878-44319986)
chr4 (22-107)||(969432-969517)
chr4 (155-196)||(1075509-1075550)
chr4 (69-106)||(3662293-3662330)
chr4 (53-102)||(4471100-4471149)
chr4 (63-104)||(4798649-4798690)
chr4 (63-112)||(8422919-8422968)
chr4 (52-101)||(11264229-11264278)
chr4 (206-239)||(18512447-18512480)
chr4 (65-106)||(21953214-21953255)
chr4 (125-194)||(27623641-27623710)
chr4 (206-243)||(47970401-47970438)
chr4 (52-105)||(51555956-51556009)
chr4 (62-103)||(54575679-54575720)
chr4 (125-197)||(1408291-1408363)
chr4 (67-144)||(3175894-3175973)
chr4 (206-238)||(18628486-18628518)
chr4 (66-106)||(22684604-22684644)
chr4 (63-103)||(24160929-24160969)
chr4 (63-103)||(26520320-26520360)
chr4 (47-106)||(55437374-55437431)
[»] scaffold0654 (1 HSPs)
scaffold0654 (20-106)||(6725-6812)
[»] scaffold0014 (1 HSPs)
scaffold0014 (20-106)||(116644-116731)
[»] scaffold0590 (1 HSPs)
scaffold0590 (52-106)||(1162-1216)
[»] scaffold0275 (1 HSPs)
scaffold0275 (52-106)||(2759-2813)
[»] scaffold0024 (1 HSPs)
scaffold0024 (20-101)||(23807-23888)
[»] chr1 (50 HSPs)
chr1 (52-113)||(870973-871034)
chr1 (158-253)||(33759630-33759724)
chr1 (155-256)||(43420315-43420413)
chr1 (63-106)||(50319231-50319274)
chr1 (52-106)||(23895264-23895318)
chr1 (152-202)||(28689418-28689468)
chr1 (152-197)||(15579536-15579581)
chr1 (53-106)||(40357974-40358027)
chr1 (20-105)||(41638399-41638484)
chr1 (63-103)||(7028231-7028271)
chr1 (128-180)||(26293140-26293192)
chr1 (155-199)||(49521774-49521818)
chr1 (118-161)||(10581108-10581151)
chr1 (154-239)||(15581310-15581392)
chr1 (63-106)||(26184690-26184733)
chr1 (155-206)||(29723546-29723597)
chr1 (63-106)||(36151593-36151636)
chr1 (155-206)||(37811909-37811960)
chr1 (129-191)||(2035408-2035470)
chr1 (67-105)||(4276725-4276763)
chr1 (52-98)||(6659631-6659677)
chr1 (68-159)||(7218107-7218200)
chr1 (73-103)||(14332561-14332591)
chr1 (52-106)||(36602718-36602772)
chr1 (56-106)||(37175958-37176008)
chr1 (63-101)||(37591371-37591409)
chr1 (65-103)||(37841939-37841977)
chr1 (52-106)||(46499942-46499996)
chr1 (156-206)||(49692014-49692064)
chr1 (21-106)||(4202217-4202302)
chr1 (154-261)||(6292549-6292652)
chr1 (118-195)||(16980823-16980900)
chr1 (63-104)||(17420142-17420183)
chr1 (13-82)||(26179382-26179451)
chr1 (152-181)||(27145975-27146004)
chr1 (206-239)||(29793630-29793663)
chr1 (26-103)||(33339511-33339588)
chr1 (65-106)||(45999376-45999417)
chr1 (63-103)||(172668-172708)
chr1 (64-100)||(1725205-1725241)
chr1 (63-103)||(4549805-4549845)
chr1 (63-103)||(4700157-4700197)
chr1 (52-96)||(13037792-13037836)
chr1 (118-158)||(25005831-25005871)
chr1 (152-180)||(27140532-27140560)
chr1 (152-238)||(32515374-32515457)
chr1 (66-106)||(39777605-39777645)
chr1 (62-106)||(43420019-43420063)
chr1 (117-161)||(49282905-49282949)
chr1 (66-106)||(49517012-49517052)
[»] scaffold0508 (1 HSPs)
scaffold0508 (127-195)||(9772-9840)
[»] scaffold0091 (1 HSPs)
scaffold0091 (41-104)||(5936-5999)
[»] scaffold0053 (1 HSPs)
scaffold0053 (63-106)||(20118-20161)
[»] scaffold0110 (1 HSPs)
scaffold0110 (132-174)||(35813-35855)
[»] scaffold0020 (1 HSPs)
scaffold0020 (154-253)||(159891-159987)


Alignment Details
Target: chr5 (Bit Score: 594; Significance: 0; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 594; E-Value: 0
Query Start/End: Original strand, 7 - 642
Target Start/End: Complemental strand, 11095656 - 11095024
Alignment:
Q  7 acagattaagctatgtttggataaacaacttaactaaacagttaccatataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||    
T  11095656 acagattaagccatgtttggataaacaacttaactaaacacttaccatataagtgattatgtataaactatttctataacaaatgatacaataaagtcaa 11095557  T
Q  107 tgtttttcaggaagctacaagttgttttcataagctattctggagaacttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaa 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11095556 tgtttttcaggaagctacaagttgttttcataagctattctggagaacttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaa 11095457  T
Q  207 caagtgtttatgtcagtagataagcttaaataaaccagtccaaacagaccttaagtggtttggaatttctcttgagcagctgaaattactaacgataaca 306  Q
       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11095456 ---gtgtttatgtcagtagataagcttaaataaaccagtccaaacagaccttaagtggtttggaatttctcttgagcagctgaaattactaacgataaca 11095360  T
Q  307 aggaatagaactctaaacttcaggatataaagtatgtattttgaatgaatgtaacaagaaaagaaactgagtaattaacagatgagctaatatagtagtg 406  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11095359 aggaatagaactctaaacttcaggatataaagtatgtattttgcatgaatgtaacaagaaaagaaactgagtaattaacagatgagctaatatagtagtg 11095260  T
Q  407 catggtggtgaaaatttgggatatagttaagtaaattatcatctaagtgcttttccagaacatggttttgaagagaatatacaaggtgtgatagtcatac 506  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  11095259 catggtggtgaaaatttgggatatagttaagtaaattatcatctaagtgcttttccagaacatggttttgaagagaatatacaaggtgtgatagtgatac 11095160  T
Q  507 cgcaattcagaagaccggcttcttgtcattcgttgatcggtaataaaccaggcctgcattgataatgaaacatctaatgagtatgaagatttattgaact 606  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11095159 cgcaattcagaagaccggcttcttgtcattcgttgatcggtaataaaccaggcctgcattgataatgaaacatctaatgagtatgaagatttattgaact 11095060  T
Q  607 aaggcttcagaaaagagtttgatgttaacatacctt 642  Q
    ||||||||||||||||||||||| ||||||||||||    
T  11095059 aaggcttcagaaaagagtttgattttaacatacctt 11095024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 129 - 197
Target Start/End: Complemental strand, 38047918 - 38047850
Alignment:
Q  129 tgttttcataagctattctggagaacttatggacatgtcataagctgtttccacaagttctctcaaaca 197  Q
    |||||||||||||||| ||||||| ||||||||||||||||||| |||||||| ||| |||| ||||||    
T  38047918 tgttttcataagctatcctggagagcttatggacatgtcataagttgtttccataagctctcccaaaca 38047850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 97
Target Start/End: Original strand, 36638644 - 36638719
Alignment:
Q  22 tttggataaacaacttaactaaacagttaccatataagagattatgtataaactatttctataacaaatgataaaa 97  Q
    |||||||||||||||||| ||| || ||| |||||| | | | ||||||||||||||||||||||||| |||||||    
T  36638644 tttggataaacaacttaattaagcacttatcatataggtgttaatgtataaactatttctataacaaaagataaaa 36638719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 63 - 106
Target Start/End: Complemental strand, 37063205 - 37063162
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    
T  37063205 ttatgtataaactatttctataacaaaagataaaataaagtcaa 37063162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 52 - 106
Target Start/End: Complemental strand, 20982277 - 20982223
Alignment:
Q  52 catataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    |||||||| | |||||||||| |||||||||||||||| ||||||||||||||||    
T  20982277 catataagtgcttatgtataagctatttctataacaaaggataaaataaagtcaa 20982223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 239
Target Start/End: Complemental strand, 10125725 - 10125650
Alignment:
Q  161 acatgtcataagctgtttccacaagttctctcaaacaatatcacaacaagtgtttatgtcagtagataagcttaaataa 239  Q
    |||||||||||| ||||| || ||||||||||| ||||| ||||||   ||| | ||||||||||||||||||||||||    
T  10125725 acatgtcataagttgtttacataagttctctcagacaatgtcacaa---gtgctcatgtcagtagataagcttaaataa 10125650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 105
Target Start/End: Complemental strand, 40499848 - 40499764
Alignment:
Q  21 gtttggataaacaacttaactaaacagttaccatataagagattatgtataaactatttctataacaaatgataaaataaagtca 105  Q
    ||||||||||||||||||| ||||   ||| |||||||| | ||||||| ||  |||||||||||||||||||||| | ||||||    
T  40499848 gtttggataaacaacttaattaaaagcttatcatataagtgcttatgtacaagttatttctataacaaatgataaagtcaagtca 40499764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 63 - 106
Target Start/End: Complemental strand, 7096258 - 7096215
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    |||||||||| |||||||||||||||| ||||||||||||||||    
T  7096258 ttatgtataagctatttctataacaaaagataaaataaagtcaa 7096215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 63 - 106
Target Start/End: Complemental strand, 28586897 - 28586854
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||    
T  28586897 ttatgtatacactatttctataacaaaagataaaataaagtcaa 28586854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 64 - 253
Target Start/End: Original strand, 42646855 - 42647042
Alignment:
Q  64 tatgtataaactatttctataacaaatgataaaataaagtcaa--tgtttttcaggaagctacaagttgttttcataagctattctggagaacttatgga 161  Q
    |||||||||  ||||| ||||||||| |||||||| |||| ||  |||||||    |||||| ||| ||||||||||| | ||  |||||| |||||| |    
T  42646855 tatgtataagatatttttataacaaaggataaaattaagttaaattgtttttgtttaagctataaggtgttttcataaacgatcttggagagcttatgaa 42646954  T
Q  162 catgtcataagctgtttccacaagttctctcaaacaatatcacaacaagtgtttatgtcagtagataagcttaaataaaccagtccaaacag 253  Q
    ||||||||||||| ||| || |||||||  |||| | |    |  |||||| | ||||||||||||||||| |||||| ||| |||||||||    
T  42646955 catgtcataagctattttcataagttcttccaaatagt----cttcaagtgctaatgtcagtagataagctcaaataagccaatccaaacag 42647042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 206
Target Start/End: Complemental strand, 4273393 - 4273339
Alignment:
Q  152 aacttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaa 206  Q
    ||||||| |||| ||||||||||||||||| | ||||||||||||||| ||||||    
T  4273393 aacttatagacaagtcataagctgtttccataggttctctcaaacaatctcacaa 4273339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 101
Target Start/End: Original strand, 13224348 - 13224406
Alignment:
Q  43 aacagttaccatataagagattatgtataaactatttctataacaaatgataaaataaa 101  Q
    |||||||| |||| ||| | |||||||||| |||||||||||||||| |||||||||||    
T  13224348 aacagttatcatagaagtgcttatgtataagctatttctataacaaaagataaaataaa 13224406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 206 - 260
Target Start/End: Original strand, 29013112 - 29013166
Alignment:
Q  206 acaagtgtttatgtcagtagataagcttaaataaaccagtccaaacagaccttaa 260  Q
    ||||||||||||| ||| |||||||||| ||||| ||| ||||||||||||||||    
T  29013112 acaagtgtttatgccagcagataagcttcaataatccaatccaaacagaccttaa 29013166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 106
Target Start/End: Original strand, 32172581 - 32172635
Alignment:
Q  52 catataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    |||| ||||| |||||||||||||||||||| |||||| |||||||| |||||||    
T  32172581 catacaagagcttatgtataaactatttctacaacaaaagataaaatgaagtcaa 32172635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 61 - 103
Target Start/End: Original strand, 34975315 - 34975357
Alignment:
Q  61 gattatgtataaactatttctataacaaatgataaaataaagt 103  Q
    ||||||||||||||||||||||||||||| ||| |||||||||    
T  34975315 gattatgtataaactatttctataacaaaagatgaaataaagt 34975357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 106
Target Start/End: Complemental strand, 35095925 - 35095871
Alignment:
Q  52 catataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    |||||||| | |||| | |||||||||||||||||||| ||||||||||||||||    
T  35095925 catataagtgcttatatttaaactatttctataacaaaagataaaataaagtcaa 35095871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 106
Target Start/End: Complemental strand, 35135804 - 35135750
Alignment:
Q  52 catataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    |||||||| | ||||||||||  ||||||||||||||| ||||||||||||||||    
T  35135804 catataagtgtttatgtataagatatttctataacaaaagataaaataaagtcaa 35135750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 253
Target Start/End: Original strand, 10640019 - 10640105
Alignment:
Q  163 atgtcataagctgtttccacaagttctctcaaacaatatcacaacaagtgtttatgtcagtagataagcttaaataaaccagtccaaacag 253  Q
    |||||||||||||||| || |||||||| ||||||||||||||| |     |||||||||||||||| || |||||| | | |||||||||    
T  10640019 atgtcataagctgttttcataagttctcccaaacaatatcacaaaa----cttatgtcagtagataaactcaaataagctaatccaaacag 10640105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 161
Target Start/End: Original strand, 16889674 - 16889774
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagtcaa--tgtttttcaggaagctacaagttgttttcataagctattctggagaacttatgg 160  Q
    |||||||||| ||||||| |||||||| |||||| | |||||||  |||||||   ||||||| ||| |||||||||||||||| || ||||  ||||||    
T  16889674 ttatgtataagctatttccataacaaaagataaacttaagtcaaactgtttttatagaagctataagctgttttcataagctatgctagagagtttatgg 16889773  T
Q  161 a 161  Q
    |    
T  16889774 a 16889774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 206 - 251
Target Start/End: Complemental strand, 39257359 - 39257314
Alignment:
Q  206 acaagtgtttatgtcagtagataagcttaaataaaccagtccaaac 251  Q
    ||||||| |||||| ||||||||||||||||||| |||||||||||    
T  39257359 acaagtgcttatgttagtagataagcttaaataagccagtccaaac 39257314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 63 - 103
Target Start/End: Original strand, 6593239 - 6593279
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagt 103  Q
    |||||||||||| |||||||||||||| |||||||||||||    
T  6593239 ttatgtataaacaatttctataacaaaagataaaataaagt 6593279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 70 - 106
Target Start/End: Original strand, 10303747 - 10303783
Alignment:
Q  70 taaactatttctataacaaatgataaaataaagtcaa 106  Q
    |||||||||||||||||||| ||||||||||||||||    
T  10303747 taaactatttctataacaaaagataaaataaagtcaa 10303783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 63 - 103
Target Start/End: Complemental strand, 12407792 - 12407752
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagt 103  Q
    |||||||||| |||||||||||||||| |||||||||||||    
T  12407792 ttatgtataagctatttctataacaaaagataaaataaagt 12407752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 63 - 150
Target Start/End: Original strand, 35960353 - 35960441
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagtcaatgtttttca-ggaagctacaagttgttttcataagctattctgga 150  Q
    ||||| ||||||||||||||||| ||| ||||||||||||||||  | |||||   || ||| |||||| ||||||||||||| |||||    
T  35960353 ttatgcataaactatttctataataaaagataaaataaagtcaaactatttcatataaactataagttgatttcataagctatcctgga 35960441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 163 - 252
Target Start/End: Original strand, 41419385 - 41419470
Alignment:
Q  163 atgtcataagctgtttccacaagttctctcaaacaatatcacaacaagtgtttatgtcagtagataagcttaaataaaccagtccaaaca 252  Q
    |||||||||||||||| |||||||| || |||||||| |||||| |    ||||||||||||||| |||| ||||||  || ||||||||    
T  41419385 atgtcataagctgttttcacaagttatcccaaacaatctcacaaaa----tttatgtcagtagattagctcaaataagtcaatccaaaca 41419470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 103
Target Start/End: Original strand, 7853602 - 7853637
Alignment:
Q  68 tataaactatttctataacaaatgataaaataaagt 103  Q
    |||||||||||||||||||||| |||||||||||||    
T  7853602 tataaactatttctataacaaaagataaaataaagt 7853637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 11667102 - 11667145
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    ||||| |||||||||||| |||||||| ||||||||||||||||    
T  11667102 ttatgcataaactatttcaataacaaaggataaaataaagtcaa 11667145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 195
Target Start/End: Original strand, 14364276 - 14364319
Alignment:
Q  152 aacttatggacatgtcataagctgtttccacaagttctctcaaa 195  Q
    |||||||||||||||||||||||||||||| ||| | |||||||    
T  14364276 aacttatggacatgtcataagctgtttccataagctttctcaaa 14364319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 161
Target Start/End: Complemental strand, 37588434 - 37588391
Alignment:
Q  118 aagctacaagttgttttcataagctattctggagaacttatgga 161  Q
    |||||| |||||||||||||||| ||||||||||| ||||||||    
T  37588434 aagctataagttgttttcataagttattctggagagcttatgga 37588391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 39128578 - 39128621
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    |||||||||| ||| |||||||||||| ||||||||||||||||    
T  39128578 ttatgtataagctaattctataacaaaagataaaataaagtcaa 39128621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 52 - 106
Target Start/End: Complemental strand, 9860940 - 9860886
Alignment:
Q  52 catataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    ||||||||  ||||||||||| ||||||||| ||||||||| |||||||| ||||    
T  9860940 catataagttattatgtataagctatttctagaacaaatgacaaaataaaatcaa 9860886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 41 - 103
Target Start/End: Original strand, 19460039 - 19460101
Alignment:
Q  41 taaacagttaccatataagagattatgtataaactatttctataacaaatgataaaataaagt 103  Q
    |||||| |||||||||||| | |||| |||| |||| || ||||||||| |||||||||||||    
T  19460039 taaacatttaccatataagtgcttatctatacactacttttataacaaaagataaaataaagt 19460101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 206 - 260
Target Start/End: Original strand, 24085127 - 24085181
Alignment:
Q  206 acaagtgtttatgtcagtagataagcttaaataaaccagtccaaacagaccttaa 260  Q
    |||||||||||||||||| | |||||||  |||| ||| ||||||||||||||||    
T  24085127 acaagtgtttatgtcagtcggtaagcttctataatccaatccaaacagaccttaa 24085181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 34690813 - 34690855
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagtca 105  Q
    |||||||||  |||||||||||||||| |||||||||||||||    
T  34690813 ttatgtatacgctatttctataacaaaagataaaataaagtca 34690855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 63 - 156
Target Start/End: Original strand, 41534381 - 41534475
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagtcaatgtttttca-ggaagctacaagttgttttcataagctattctggagaactt 156  Q
    ||||||| || |||||| | |||||||  |||||||||||  ||  | ||||| |||||||| ||||||||||||||||||||| | ||||||||    
T  41534381 ttatgtacaagctatttatgtaacaaaaaataaaataaagctaaattgtttcatggaagctataagttgttttcataagctatttttgagaactt 41534475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 165 - 252
Target Start/End: Original strand, 41534506 - 41534589
Alignment:
Q  165 gtcataagctgtttccacaagttctctcaaacaatatcacaacaagtgtttatgtcagtagataagcttaaataaaccagtccaaaca 252  Q
    |||||||||||||| |||||||| || |||||||| |||||| |    ||||||||||||||| |||| ||||||  || ||||||||    
T  41534506 gtcataagctgttttcacaagttatcccaaacaatctcacaaaa----tttatgtcagtagattagctcaaataagtcaatccaaaca 41534589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 107
Target Start/End: Complemental strand, 3970812 - 3970767
Alignment:
Q  63 ttatgtataaactatttctataaca-aatgataaaataaagtcaat 107  Q
    ||||| ||||||||||||||||||| || |||||||||||||||||    
T  3970812 ttatggataaactatttctataacacaaagataaaataaagtcaat 3970767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 197
Target Start/End: Complemental strand, 10280614 - 10280570
Alignment:
Q  152 aacttatggacatgtcataagctgtttccacaagttctctcaaaca 197  Q
    ||||||||||||| |||||||||||||||| ||||||| |||||||    
T  10280614 aacttatggacat-tcataagctgtttccataagttctttcaaaca 10280570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 100
Target Start/End: Complemental strand, 12460131 - 12460094
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataa 100  Q
    |||||||||| |||||||||||||||| ||||||||||    
T  12460131 ttatgtataagctatttctataacaaaagataaaataa 12460094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 152
Target Start/End: Original strand, 14295456 - 14295536
Alignment:
Q  74 ctatttctataacaaatgataaaataaagtcaa--tgtttttcaggaagctacaagttgttttcataagctattctggaga 152  Q
    |||||||||||||||| ||||||||||||||||  ||||||     |||||| ||| ||||||| |||||||| |||||||    
T  14295456 ctatttctataacaaaagataaaataaagtcaaactgttttcatataagctataagctgttttcgtaagctatcctggaga 14295536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 174
Target Start/End: Complemental strand, 17756435 - 17756386
Alignment:
Q  125 aagttgttttcataagctattctggagaacttatggacatgtcataagct 174  Q
    ||||||||||||||||  ||  |||| |||||||||||||||||||||||    
T  17756435 aagttgttttcataagtgatcttggacaacttatggacatgtcataagct 17756386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 101
Target Start/End: Original strand, 26516226 - 26516275
Alignment:
Q  52 catataagagattatgtataaactatttctataacaaatgataaaataaa 101  Q
    |||||||| | |||||||||| ||||||||| |||||| |||||||||||    
T  26516226 catataagtgcttatgtataagctatttctaaaacaaaagataaaataaa 26516275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 106
Target Start/End: Complemental strand, 29117063 - 29117018
Alignment:
Q  61 gattatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    |||||||||||   ||||||||||||||| ||||||||||||||||    
T  29117063 gattatgtatatgttatttctataacaaaagataaaataaagtcaa 29117018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 63 - 103
Target Start/End: Original strand, 11054125 - 11054165
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagt 103  Q
    |||||||||| |||||||||||| ||| |||||||||||||    
T  11054125 ttatgtataagctatttctataataaaagataaaataaagt 11054165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 206 - 250
Target Start/End: Complemental strand, 11615619 - 11615575
Alignment:
Q  206 acaagtgtttatgtcagtagataagcttaaataaaccagtccaaa 250  Q
    |||||||||||||| |||||||||||| |||||| ||| ||||||    
T  11615619 acaagtgtttatgttagtagataagctcaaataagccaatccaaa 11615575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 63 - 103
Target Start/End: Original strand, 11835216 - 11835256
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagt 103  Q
    |||||||||||| |||| ||||||||| |||||||||||||    
T  11835216 ttatgtataaaccatttttataacaaaagataaaataaagt 11835256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 52 - 104
Target Start/End: Original strand, 19177407 - 19177459
Alignment:
Q  52 catataagagattatgtataaactatttctataacaaatgataaaataaagtc 104  Q
    |||||||| | |||||||||||||||||||| |||| | |||||||| |||||    
T  19177407 catataagtgcttatgtataaactatttctacaacagaagataaaattaagtc 19177459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 28578834 - 28578874
Alignment:
Q  66 tgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    ||||||| |||||||||||||| | ||||||||||||||||    
T  28578834 tgtataagctatttctataacataagataaaataaagtcaa 28578874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 41 - 105
Target Start/End: Complemental strand, 29115366 - 29115302
Alignment:
Q  41 taaacagttaccatataagagattatgtataaactatttctataacaaatgataaaataaagtca 105  Q
    |||||| ||| |||| ||| | |||||||||| ||||||||| |||||| | |||||||||||||    
T  29115366 taaacatttatcataaaagtgcttatgtataagctatttctacaacaaaaggtaaaataaagtca 29115302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 74 - 106
Target Start/End: Complemental strand, 29590860 - 29590828
Alignment:
Q  74 ctatttctataacaaatgataaaataaagtcaa 106  Q
    |||||||||||||||| ||||||||||||||||    
T  29590860 ctatttctataacaaaagataaaataaagtcaa 29590828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 154 - 206
Target Start/End: Original strand, 32172709 - 32172761
Alignment:
Q  154 cttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaa 206  Q
    ||||||||||||||||||| |||||||| ||| |||| ||||| || ||||||    
T  32172709 cttatggacatgtcataagttgtttccataagctctcccaaactatctcacaa 32172761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 152 - 180
Target Start/End: Original strand, 38338377 - 38338405
Alignment:
Q  152 aacttatggacatgtcataagctgtttcc 180  Q
    |||||||||||||||||||||||||||||    
T  38338377 aacttatggacatgtcataagctgtttcc 38338405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 62 - 106
Target Start/End: Original strand, 40097147 - 40097191
Alignment:
Q  62 attatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    ||||| |||||||||||||||| ||||| |||||||||| |||||    
T  40097147 attatctataaactatttctatcacaaaagataaaataatgtcaa 40097191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 152 - 180
Target Start/End: Complemental strand, 41957467 - 41957439
Alignment:
Q  152 aacttatggacatgtcataagctgtttcc 180  Q
    |||||||||||||||||||||||||||||    
T  41957467 aacttatggacatgtcataagctgtttcc 41957439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 5e-24; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 52 - 260
Target Start/End: Complemental strand, 28803648 - 28803441
Alignment:
Q  52 catataagagattatgtataaactatttctataacaaatgataaaataaagtcaa--tgtttttcaggaagctacaagttgttttcataagctattctgg 149  Q
    |||||||| | |||| |||||  |||||| |||||||| ||||||||||||||||  || |||     |||||||||||||||||| ||| |||| ||||    
T  28803648 catataagtgcttatatataagttatttcgataacaaaagataaaataaagtcaaactgatttcatataagctacaagttgttttcttaaactatcctgg 28803549  T
Q  150 agaacttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaacaagtgtttatgtcagtagataagcttaaataaaccagtccaa 249  Q
    ||| ||||||||||||||||||| |||||||| | ||||||||||||| | ||   ||| ||| ||||| | ||||||||||| ||||||  || |||||    
T  28803548 agagcttatggacatgtcataagttgtttccatatgttctctcaaacagtctc---acatgtgcttatgccggtagataagctcaaataagtcaatccaa 28803452  T
Q  250 acagaccttaa 260  Q
    | || ||||||    
T  28803451 ataggccttaa 28803441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 19 - 151
Target Start/End: Complemental strand, 17952876 - 17952742
Alignment:
Q  19 atgtttggataaacaacttaactaaacagttaccatataagagattatgtataaactatttctataacaaatgataaaataaagtcaatgt-ttttca-g 116  Q
    |||||||| |||| || ||||  || || ||| |||||||||| |||| ||||| |||||||||||||||| ||||||||||||||||  | ||||||      
T  17952876 atgtttggttaaaaaatttaataaagcacttatcatataagagcttatatataagctatttctataacaaaagataaaataaagtcaaactattttcata 17952777  T
Q  117 gaagctacaagttgttttcataagctattctggag 151  Q
     |||||||||| |||||||||||||||| ||||||    
T  17952776 taagctacaagatgttttcataagctatcctggag 17952742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 63 - 197
Target Start/End: Original strand, 10143111 - 10143247
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagtcaa--tgtttttcaggaagctacaagttgttttcataagctattctggagaacttatgg 160  Q
    ||||||||||  ||||||||||||||| |||||||| |||||||  |||||||    |||||| ||||| ||||||||||||||  ||||||  ||||||    
T  10143111 ttatgtataagttatttctataacaaaagataaaattaagtcaaactgtttttatataagctataagtttttttcataagctatcatggagagtttatgg 10143210  T
Q  161 acatgtcataagctgtttccacaagttctctcaaaca 197  Q
    | |||||||||  |||| ||| || ||||| ||||||    
T  10143211 atatgtcataaattgttcccataaattctcccaaaca 10143247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 155 - 252
Target Start/End: Original strand, 4350747 - 4350841
Alignment:
Q  155 ttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaacaagtgtttatgtcagtagataagcttaaataaaccagtccaaaca 252  Q
    ||||| |||||||||||||||||| || ||||||||||||||||| ||     ||||| ||||||||||||| ||||| |||||| ||| ||||||||    
T  4350747 ttatgaacatgtcataagctgttttcataagttctctcaaacaatctc---ttaagtgcttatgtcagtagagaagctcaaataagccaatccaaaca 4350841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 252
Target Start/End: Original strand, 787388 - 787483
Alignment:
Q  154 cttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaacaagtgtttatgtcagtagataagcttaaataaaccagtccaaaca 252  Q
    ||||||||||||||||||||||||| || |||||||| |||||| | ||   ||||||| ||||| ||||||||| |||  ||||| ||| ||||||||    
T  787388 cttatggacatgtcataagctgttttcataagttctcacaaacagtgtc---acaagtgcttatgccagtagatatgctcgaataatccaatccaaaca 787483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 206
Target Start/End: Original strand, 1801724 - 1801776
Alignment:
Q  154 cttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaa 206  Q
    |||||| |||||||||||||||||| || |||||||| |||||||||||||||    
T  1801724 cttatgaacatgtcataagctgttttcataagttctcccaaacaatatcacaa 1801776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 37033983 - 37034026
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||    
T  37033983 ttatgtataaactatttctataaaaaaagataaaataaagtcaa 37034026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 168 - 253
Target Start/End: Complemental strand, 40400900 - 40400818
Alignment:
Q  168 ataagctgtttccacaagttctctcaaacaatatcacaacaagtgtttatgtcagtagataagcttaaataaaccagtccaaacag 253  Q
    ||||||||||| || ||||| | ||||||||| ||||||   || |||||||||||||||| |||||||||| ||| |||||||||    
T  40400900 ataagctgttttcataagttttttcaaacaatgtcacaa---gtctttatgtcagtagataggcttaaataagccaatccaaacag 40400818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 47 - 101
Target Start/End: Original strand, 10190202 - 10190256
Alignment:
Q  47 gttaccatataagagattatgtataaactatttctataacaaatgataaaataaa 101  Q
    |||| |||||||| | ||||||||||||||||| ||||||||| |||||||||||    
T  10190202 gttatcatataagtgcttatgtataaactatttttataacaaaggataaaataaa 10190256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 106
Target Start/End: Original strand, 31461366 - 31461420
Alignment:
Q  52 catataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    |||||||| | |||| ||||| |||||||||||||||| ||||||||||||||||    
T  31461366 catataagtggttatatataagctatttctataacaaaagataaaataaagtcaa 31461420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 139
Target Start/End: Original strand, 10150651 - 10150772
Alignment:
Q  20 tgtttggataaacaacttaactaaacagttaccatataagagattatgtataaactatttctataacaaatgataaaataaag-tcaatgtttttca-gg 117  Q
    ||||| |||||||||||||| ||| || |||  ||||||| | ||||||||||  ||||||||||| ||| |||||||||| | | |||| ||||||  |    
T  10150651 tgtttagataaacaacttaattaagcacttattatataagtgtttatgtataagttatttctataataaaagataaaataacgttaaatggttttcatag 10150750  T
Q  118 aagctacaagttgttttcataa 139  Q
    ||  ||||||||||||||||||    
T  10150751 aatttacaagttgttttcataa 10150772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 104
Target Start/End: Original strand, 12215746 - 12215787
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagtc 104  Q
    |||||||||||||||||||| |||||| ||||||||||||||    
T  12215746 ttatgtataaactatttctacaacaaaagataaaataaagtc 12215787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 113
Target Start/End: Original strand, 13864578 - 13864639
Alignment:
Q  52 catataagagattatgtataaactatttctataacaaatgataaaataaagtcaatgttttt 113  Q
    |||||||| | |||||||||| |||||||||||||||| | |||||||||||| || |||||    
T  13864578 catataagtgtttatgtataagctatttctataacaaaaggtaaaataaagtcgattttttt 13864639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 63 - 107
Target Start/End: Original strand, 25609735 - 25609779
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagtcaat 107  Q
    |||||||||| |||||||||||| ||| |||||||||||||||||    
T  25609735 ttatgtataagctatttctataagaaaagataaaataaagtcaat 25609779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 26484257 - 26484193
Alignment:
Q  21 gtttggataaacaacttaactaaacagttaccatataagagattatgtataaactatttctataa 85  Q
    ||||||||||||||||||| ||| || ||| |||||||| | ||||| |||| ||||||||||||    
T  26484257 gtttggataaacaacttaattaatcatttatcatataagtgcttatggataagctatttctataa 26484193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 63 - 103
Target Start/End: Complemental strand, 30990500 - 30990460
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagt 103  Q
    |||||||||| || |||||||||||||||||||||||||||    
T  30990500 ttatgtataagctctttctataacaaatgataaaataaagt 30990460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 41 - 105
Target Start/End: Original strand, 34339040 - 34339104
Alignment:
Q  41 taaacagttaccatataagagattatgtataaactatttctataacaaatgataaaataaagtca 105  Q
    |||||| ||| |||||||| | ||||||||||||| |||||||| | || |||||||||||||||    
T  34339040 taaacacttatcatataagtgcttatgtataaactttttctatagctaaagataaaataaagtca 34339104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 129 - 189
Target Start/End: Complemental strand, 40776136 - 40776076
Alignment:
Q  129 tgttttcataagctattctggagaacttatggacatgtcataagctgtttccacaagttct 189  Q
    ||||||||||| |||||| ||||| |||||| | |||||||||||||||| || |||||||    
T  40776136 tgttttcataatctattccggagagcttatgcatatgtcataagctgttttcataagttct 40776076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 106
Target Start/End: Complemental strand, 5045288 - 5045245
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    |||||||||| |||||| ||||||||| ||||||||||||||||    
T  5045288 ttatgtataagctatttttataacaaaagataaaataaagtcaa 5045245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 102
Target Start/End: Original strand, 5133711 - 5133750
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaag 102  Q
    |||||||||| |||||||||||||||| ||||||||||||    
T  5133711 ttatgtataagctatttctataacaaaagataaaataaag 5133750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 13866828 - 13866871
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    |||||||||||||||||||||| |||| |||||||| |||||||    
T  13866828 ttatgtataaactatttctatagcaaaagataaaattaagtcaa 13866871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 98
Target Start/End: Complemental strand, 21280567 - 21280489
Alignment:
Q  22 tttggataaacaacttaactaaacagttacca--tataagagattatgtataaactatttctataacaaatgataaaat 98  Q
    |||||||||||||||||||||||||||||| |  ||||||   ||||| |||| ||||||||||| | || ||||||||    
T  21280567 tttggataaacaacttaactaaacagttacaagctataagcacttatgcataagctatttctataccgaaagataaaat 21280489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 106
Target Start/End: Complemental strand, 32098439 - 32098396
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    |||| ||||| |||||||||||||||| ||||||||||||||||    
T  32098439 ttatatataagctatttctataacaaaagataaaataaagtcaa 32098396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 106
Target Start/End: Complemental strand, 38239682 - 38239639
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    |||||||||| |||||||||||||||| |||||||| |||||||    
T  38239682 ttatgtataagctatttctataacaaaagataaaatcaagtcaa 38239639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 239
Target Start/End: Original strand, 43985265 - 43985347
Alignment:
Q  154 cttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaacaagtgtttatgtcagtagataagcttaaataa 239  Q
    ||||||||||||||||||| ||||||   ||  ||||||||||| | | ||||   |||||||||||||||||||| |||||||||    
T  43985265 cttatggacatgtcataagttgtttcagtaatctctctcaaacagttttacaa---gtgtttatgtcagtagataaacttaaataa 43985347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 155 - 197
Target Start/End: Complemental strand, 1494459 - 1494417
Alignment:
Q  155 ttatggacatgtcataagctgtttccacaagttctctcaaaca 197  Q
    |||||||||||||||||||||||| || ||| |||||||||||    
T  1494459 ttatggacatgtcataagctgttttcataagctctctcaaaca 1494417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 63 - 101
Target Start/End: Complemental strand, 26522755 - 26522717
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaa 101  Q
    ||||||||||||||||||||||||||| |||| ||||||    
T  26522755 ttatgtataaactatttctataacaaaagatataataaa 26522717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 206 - 240
Target Start/End: Original strand, 29430863 - 29430897
Alignment:
Q  206 acaagtgtttatgtcagtagataagcttaaataaa 240  Q
    ||||||||||||||||||||||||||| |||||||    
T  29430863 acaagtgtttatgtcagtagataagctcaaataaa 29430897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 125 - 171
Target Start/End: Complemental strand, 32757529 - 32757483
Alignment:
Q  125 aagttgttttcataagctattctggagaacttatggacatgtcataa 171  Q
    |||||||||||||||| |||  |||||| ||||||||||||||||||    
T  32757529 aagttgttttcataagatatcatggagagcttatggacatgtcataa 32757483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 52 - 106
Target Start/End: Complemental strand, 33197381 - 33197327
Alignment:
Q  52 catataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    |||||||| | |||| ||||| |||||||||||||||| |||| |||||||||||    
T  33197381 catataagtgcttatctataagctatttctataacaaaagatagaataaagtcaa 33197327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 52 - 106
Target Start/End: Complemental strand, 35329961 - 35329907
Alignment:
Q  52 catataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    |||||||| | ||||| |||||||||||| |||||| | ||||||||||||||||    
T  35329961 catataagtgtttatgcataaactatttccataacataagataaaataaagtcaa 35329907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 52 - 106
Target Start/End: Original strand, 35459838 - 35459892
Alignment:
Q  52 catataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    |||||||| |||| ||||||| |||||| |||| |||| ||||||||||||||||    
T  35459838 catataagtgattttgtataagctatttgtataccaaaagataaaataaagtcaa 35459892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 52 - 106
Target Start/End: Original strand, 37053522 - 37053576
Alignment:
Q  52 catataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    |||||||| | ||||||||| ||||||||||||||| |  |||||||||||||||    
T  37053522 catataagtgcttatgtatagactatttctataacagaaaataaaataaagtcaa 37053576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 210 - 252
Target Start/End: Complemental strand, 40837398 - 40837356
Alignment:
Q  210 gtgtttatgtcagtagataagcttaaataaaccagtccaaaca 252  Q
    ||||||||||||||||||||||| |||||| ||| ||||||||    
T  40837398 gtgtttatgtcagtagataagctcaaataagccaatccaaaca 40837356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 258
Target Start/End: Original strand, 8017491 - 8017591
Alignment:
Q  155 ttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaacaagtgtttatgtcagtagataagcttaaataaaccagtccaaacaga 254  Q
    ||||| |||| ||||||||||||| || |||||||| |||| |||  |   ||||||| |||||||| ||||||| || ||||||  || ||||||||||    
T  8017491 ttatgaacatatcataagctgttttcataagttctcccaaataatcgc---acaagtgcttatgtcaatagataacctcaaataagtcaatccaaacaga 8017587  T
Q  255 cctt 258  Q
    ||||    
T  8017588 cctt 8017591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 146 - 195
Target Start/End: Original strand, 12785911 - 12785960
Alignment:
Q  146 ctggagaacttatggacatgtcataagctgtttccacaagttctctcaaa 195  Q
    |||||||||||||||||||||| |||| |||||||  ||| |||||||||    
T  12785911 ctggagaacttatggacatgtcgtaagttgtttccgtaagctctctcaaa 12785960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 153
Target Start/End: Original strand, 40145421 - 40145492
Alignment:
Q  83 taacaaatgataaaataaagtcaa--tgtttttcaggaagctacaagttgttttcataagctattctggagaa 153  Q
    ||||||| ||||||||||||||||  |||||||  | ||| || |||||||||||||||||| ||||||||||    
T  40145421 taacaaaagataaaataaagtcaagttgtttttatgtaagttataagttgttttcataagct-ttctggagaa 40145492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 106
Target Start/End: Complemental strand, 40837557 - 40837516
Alignment:
Q  65 atgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    |||||||| |||||||||||||||| |||||| |||||||||    
T  40837557 atgtataagctatttctataacaaaagataaattaaagtcaa 40837516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 104
Target Start/End: Complemental strand, 41241008 - 41240967
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagtc 104  Q
    |||||||||||||||| ||||||||||  |||||||||||||    
T  41241008 ttatgtataaactattcctataacaaaatataaaataaagtc 41240967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 100
Target Start/End: Complemental strand, 41809374 - 41809337
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataa 100  Q
    ||||||||||||||||||||||||||| || |||||||    
T  41809374 ttatgtataaactatttctataacaaaagaaaaaataa 41809337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 54 - 106
Target Start/End: Complemental strand, 14278034 - 14277982
Alignment:
Q  54 tataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    |||||| | |||||||||||||||||||||||| ||  || ||||||||||||    
T  14278034 tataagtgcttatgtataaactatttctataactaaacattaaataaagtcaa 14277982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 154 - 198
Target Start/End: Complemental strand, 16398485 - 16398441
Alignment:
Q  154 cttatggacatgtcataagctgtttccacaagttctctcaaacaa 198  Q
    ||||||||||||||||||| ||||| || | ||||||||||||||    
T  16398485 cttatggacatgtcataagttgttttcatatgttctctcaaacaa 16398441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 63 - 106
Target Start/End: Complemental strand, 31740091 - 31740047
Alignment:
Q  63 ttatgtataaa-ctatttctataacaaatgataaaataaagtcaa 106  Q
    ||||||||||| ||||||||||||| || ||||||||||||||||    
T  31740091 ttatgtataaagctatttctataactaaagataaaataaagtcaa 31740047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 47 - 103
Target Start/End: Complemental strand, 33267663 - 33267607
Alignment:
Q  47 gttaccatataagagattatgtataaactatttctataacaaatgataaaataaagt 103  Q
    |||| |||||||| | |||||||||| ||||||||||||||||   |||||||||||    
T  33267663 gttatcatataagtgcttatgtataatctatttctataacaaacagtaaaataaagt 33267607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 154 - 198
Target Start/End: Complemental strand, 41851178 - 41851134
Alignment:
Q  154 cttatggacatgtcataagctgtttccacaagttctctcaaacaa 198  Q
    |||||||||||||||||||||||||||  ||| ||| ||||||||    
T  41851178 cttatggacatgtcataagctgtttccgtaagctctttcaaacaa 41851134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 7e-20; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 63 - 206
Target Start/End: Original strand, 34770831 - 34770976
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagtcaa--tgtttttcaggaagctacaagttgttttcataagctattctggagaacttatgg 160  Q
    ||||||| |||||||||| || ||||| ||||||||||||||||  ||||||     |||||| |||||||||||||||||||| || ||||  | ||||    
T  34770831 ttatgtaaaaactatttccattacaaaagataaaataaagtcaaattgttttcatttaagctataagttgttttcataagctatcctagagagttcatgg 34770930  T
Q  161 acatgtcataagctgtttccacaagttctctcaaacaatatcacaa 206  Q
    |||||||||||||||||| || | | ||||||||||| | ||||||    
T  34770931 acatgtcataagctgttttcataggatctctcaaacagtttcacaa 34770976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 52 - 190
Target Start/End: Original strand, 14482130 - 14482269
Alignment:
Q  52 catataagagattatgtataaactatttctataacaaatgataaaataaagtcaa--tgtttttcaggaagctacaagttgttttcataagctattctgg 149  Q
    |||||||| | ||||||||||||||||||||||||||| ||||||||||||||||  |||||||     | ||  |||||||||||| |||||||  ||     
T  14482130 catataagtgcttatgtataaactatttctataacaaaagataaaataaagtcaaattgttttttttacatct-taagttgttttcacaagctatcatga 14482228  T
Q  150 agaacttatggacatgtcataagctgtttccacaagttctc 190  Q
    ||| ||||||||||||| |||||| ||||||| ||| ||||    
T  14482229 agagcttatggacatgtgataagccgtttccataagctctc 14482269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 239
Target Start/End: Original strand, 29973212 - 29973294
Alignment:
Q  158 tggacatgtcataagctgtttccacaagttctctcaaacaatatcac-aacaagtgtttatgtcagtagataagcttaaataa 239  Q
    |||||||||  |||| |||||||| ||| ||||||||||||| |||| |||||||| ||||||||||| ||||||| ||||||    
T  29973212 tggacatgttgtaagttgtttccataagctctctcaaacaatgtcacgaacaagtgcttatgtcagtaaataagctaaaataa 29973294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 255
Target Start/End: Complemental strand, 31915401 - 31915209
Alignment:
Q  62 attatgtataaactatttctataacaaatgataaaataaagtcaa--tgtttttcaggaagctacaagttgttttcataagctattctggagaacttatg 159  Q
    ||||||||||| |||| ||||||||||| |||| |||||||||||  ||||||     ||| || ||| ||| ||  |||||||| ||||||| ||||||    
T  31915401 attatgtataagctatatctataacaaaagatagaataaagtcaaattgttttcatacaaggtataagatgtctttgtaagctatcctggagagcttatg 31915302  T
Q  160 gacatgtcataagctgtttccacaagttctctcaaacaatatcacaacaagtgtttatgtcagtagataagcttaaataaaccagtccaaacagac 255  Q
    ||| ||||||||| |||||  | ||| | ||||||||| | ||||||   || ||||||| | ||||||| || || |||| ||||||||||||||    
T  31915301 gacttgtcataagttgtttgtataagctttctcaaacagtctcacaa---gtatttatgtgaatagataaactcaagtaaatcagtccaaacagac 31915209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 106
Target Start/End: Complemental strand, 39392791 - 39392749
Alignment:
Q  64 tatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  39392791 tatgtataaactatttctataacaaaagataaaataaagtcaa 39392749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 106
Target Start/End: Original strand, 40356767 - 40356853
Alignment:
Q  20 tgtttggataaacaacttaactaaacagttaccatataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    |||||| ||||||||||||| |||||| ||  |||||||| | |||| ||||| |||||| ||||| ||| ||||||||||||||||    
T  40356767 tgtttgaataaacaacttaattaaacacttgtcatataagtgcttatctataagctatttatataataaaagataaaataaagtcaa 40356853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 503 - 576
Target Start/End: Original strand, 30276575 - 30276648
Alignment:
Q  503 ataccgcaattcagaagaccggcttcttgtcattcgttgatcggtaataaaccaggcctgcattgataatgaaa 576  Q
    ||||| |||||||||||| || ||||||||||||||||||||| | | |||||| ||||||||| |||| ||||    
T  30276575 atacctcaattcagaagatcgacttcttgtcattcgttgatcgcttagaaaccaagcctgcattaataacgaaa 30276648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 63 - 141
Target Start/End: Original strand, 42597340 - 42597420
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagtcaa--tgtttttcaggaagctacaagttgttttcataagc 141  Q
    |||||||||| |||||||||||||||| ||||||||||||| ||  ||||||   | |||||| |||||||||||||||||    
T  42597340 ttatgtataagctatttctataacaaaagataaaataaagtaaaattgttttcatgcaagctataagttgttttcataagc 42597420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 152 - 253
Target Start/End: Original strand, 16162814 - 16162912
Alignment:
Q  152 aacttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaacaagtgtttatgtcagtagataagcttaaataaaccagtccaaac 251  Q
    |||||||| ||| |||||||||||||| || ||||| ||||||||| | ||   |||||||||||||  ||||||||| || |||||| ||| |||||||    
T  16162814 aacttatgaacaggtcataagctgttttcataagttttctcaaacagtctc---acaagtgtttatgctagtagataaactcaaataagccaatccaaac 16162910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 174
Target Start/End: Complemental strand, 9912852 - 9912807
Alignment:
Q  129 tgttttcataagctattctggagaacttatggacatgtcataagct 174  Q
    ||||||| |||||||| ||||||| |||||||||||||||||||||    
T  9912852 tgttttcctaagctatcctggagagcttatggacatgtcataagct 9912807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 63 - 103
Target Start/End: Original strand, 26215435 - 26215475
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagt 103  Q
    |||||||||| |||||||||||||||| |||||||||||||    
T  26215435 ttatgtataagctatttctataacaaaagataaaataaagt 26215475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 55 - 159
Target Start/End: Original strand, 27754334 - 27754441
Alignment:
Q  55 ataagagattatgtataaactatttctataacaaatgataaaataaag--tcaatgtttttca-ggaagctacaagttgttttcataagctattctggag 151  Q
    ||||||| |||||||||||||||||||||  ||||  |||||||||||  |||||  |||||| |  | ||| |||| |||||||||||||||| |||||    
T  27754334 ataagagcttatgtataaactatttctattgcaaaatataaaataaagtttcaattattttcatgttaactataagtggttttcataagctattttggag 27754433  T
Q  152 aacttatg 159  Q
    | ||||||    
T  27754434 agcttatg 27754441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 102
Target Start/End: Original strand, 3936788 - 3936827
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaag 102  Q
    |||||||||| |||||||||||||||| ||||||||||||    
T  3936788 ttatgtataatctatttctataacaaaggataaaataaag 3936827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 104
Target Start/End: Original strand, 5226519 - 5226582
Alignment:
Q  41 taaacagttaccatataagagattatgtataaactatttctataacaaatgataaaataaagtc 104  Q
    |||||| ||| |||||||| | |||||||||||| ||||| |||||||| |||||||| |||||    
T  5226519 taaacatttatcatataagtgtttatgtataaacaatttcaataacaaaagataaaatcaagtc 5226582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 106
Target Start/End: Original strand, 7008558 - 7008609
Alignment:
Q  55 ataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    |||| ||||| ||||||| |||||||||||||||  ||||||||||||||||    
T  7008558 ataaaagattttgtataatctatttctataacaatggataaaataaagtcaa 7008609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 8062254 - 8062297
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    ||||||||| ||  ||||||||||||||||||||||||||||||    
T  8062254 ttatgtatacaccctttctataacaaatgataaaataaagtcaa 8062297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 197
Target Start/End: Complemental strand, 30988005 - 30987962
Alignment:
Q  154 cttatggacatgtcataagctgtttccacaagttctctcaaaca 197  Q
    ||||||||||||||||||| |||||||| ||| |||||||||||    
T  30988005 cttatggacatgtcataagttgtttccataagctctctcaaaca 30987962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 43393822 - 43393704
Alignment:
Q  118 aagctacaagttgttttcataagctattctggagaacttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaacaagtgtttat 217  Q
    |||||| ||| | ||||||||||||||| |||||| ||||||  ||||||||||| ||| || | ||| |||| |||||| | ||   | |||||||| |    
T  43393822 aagctataagcttttttcataagctattatggagagcttatgctcatgtcataagttgtatctataagctctcccaaacagtctc---aaaagtgttttt 43393726  T
Q  218 gtcagtagataagcttaaataa 239  Q
    |  |||||||||||||||||||    
T  43393725 gcaagtagataagcttaaataa 43393704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 152 - 206
Target Start/End: Complemental strand, 11569473 - 11569419
Alignment:
Q  152 aacttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaa 206  Q
    |||||||| ||||||||||||||||||||| ||| ||||| ||||| | ||||||    
T  11569473 aacttatgtacatgtcataagctgtttccataagctctcttaaacagtctcacaa 11569419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 164 - 206
Target Start/End: Complemental strand, 35534616 - 35534574
Alignment:
Q  164 tgtcataagctgtttccacaagttctctcaaacaatatcacaa 206  Q
    ||||||||||||||| |||||||||||||||||| | ||||||    
T  35534616 tgtcataagctgttttcacaagttctctcaaacagtctcacaa 35534574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 106
Target Start/End: Complemental strand, 1470985 - 1470944
Alignment:
Q  65 atgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    |||||||| |||||||||||| ||| ||||||||||||||||    
T  1470985 atgtataagctatttctataataaaagataaaataaagtcaa 1470944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 144
Target Start/End: Original strand, 4762462 - 4762531
Alignment:
Q  75 tatttctataacaaatgataaaataaagtcaatgtttttcaggaagctacaagttgttttcataagctat 144  Q
    ||||||||| ||||| ||| ||||||||||| | |||||    ||||| |||||||||||||||||||||    
T  4762462 tatttctattacaaaagatgaaataaagtcattttttttataaaagcttcaagttgttttcataagctat 4762531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 253
Target Start/End: Complemental strand, 6875536 - 6875440
Alignment:
Q  154 cttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaacaagtgtttatgtcagtagataagcttaaataaaccagtccaaacag 253  Q
    |||||| |||| |||||| |||||| || | |||||| |||||| ||||||||    ||  ||| ||||||||||||||||||||||||| | |||||||    
T  6875536 cttatgaacatatcataatctgttttcatatgttctcccaaacattatcacaaa---tgcctatatcagtagataagcttaaataaaccaattcaaacag 6875440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 106
Target Start/End: Original strand, 34563167 - 34563232
Alignment:
Q  41 taaacagttaccatataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    |||||| ||| |||||||| | |||| |||||  ||||||||| ||||| ||||||||||||||||    
T  34563167 taaacatttatcatataagtgcttatatataagttatttctatgacaaaggataaaataaagtcaa 34563232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 103
Target Start/End: Original strand, 42568710 - 42568792
Alignment:
Q  19 atgtttggataaacaacttaactaaacagttaccatataagagattatgtataaactatttctataacaaatgataaaataaagt 103  Q
    |||||||||||||||||||||  ||||| ||| ||||||||   |||  ||||| ||||||||| |||| | |||||||||||||    
T  42568710 atgtttggataaacaacttaatcaaacacttatcatataagcactta--tataagctatttctaaaacagaagataaaataaagt 42568792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 129 - 177
Target Start/End: Complemental strand, 2107392 - 2107344
Alignment:
Q  129 tgttttcataagctattctggagaacttatggacatgtcataagctgtt 177  Q
    ||||||||||||||||  |||||| |||||||||||| |||||| ||||    
T  2107392 tgttttcataagctatcttggagagcttatggacatgccataagttgtt 2107344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 63 - 103
Target Start/End: Original strand, 4558737 - 4558777
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagt 103  Q
    |||||||||| |||||||||||| ||| |||||||||||||    
T  4558737 ttatgtataagctatttctataataaaagataaaataaagt 4558777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 10722682 - 10722730
Alignment:
Q  156 tatggacatgtcataagctgtttccacaagttctctcaaacaatatcac 204  Q
    |||||| ||||||||||||||||||| || ||||| |||||||| ||||    
T  10722682 tatggagatgtcataagctgtttccataaattctcccaaacaatctcac 10722730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 154 - 206
Target Start/End: Original strand, 11415210 - 11415262
Alignment:
Q  154 cttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaa 206  Q
    ||||||||||||| |||||||||||||| ||  ||||| ||||||| ||||||    
T  11415210 cttatggacatgttataagctgtttccataaactctctaaaacaatctcacaa 11415262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 1e-18; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 131 - 249
Target Start/End: Original strand, 27857391 - 27857506
Alignment:
Q  131 ttttcataagctattctggagaacttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaacaagtgtttatgtcagtagataag 230  Q
    ||||||||||||||  |||||| |||||||| |||||||||| ||||| || ||| |||| |||||| | ||   |||||||| |||||||||||||||     
T  27857391 ttttcataagctatcatggagagcttatggagatgtcataagttgttttcataagctctcccaaacagtttc---acaagtgtctatgtcagtagataaa 27857487  T
Q  231 cttaaataaaccagtccaa 249  Q
    || ||||||||||||||||    
T  27857488 ctcaaataaaccagtccaa 27857506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 75 - 144
Target Start/End: Original strand, 4006665 - 4006736
Alignment:
Q  75 tatttctataacaaatgataaaataaagtcaa--tgtttttcaggaagctacaagttgttttcataagctat 144  Q
    ||||||||||||||||||||||||||||||||  |||||||    |||||| ||||||||||||||||||||    
T  4006665 tatttctataacaaatgataaaataaagtcaaattgtttttatataagctataagttgttttcataagctat 4006736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 206
Target Start/End: Original strand, 3738125 - 3738177
Alignment:
Q  154 cttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaa 206  Q
    |||||||||||||||||||||||||||||||| ||| ||||||| | ||||||    
T  3738125 cttatggacatgtcataagctgtttccacaagatctttcaaacagtctcacaa 3738177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 260
Target Start/End: Original strand, 31624312 - 31624419
Alignment:
Q  152 aacttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaacaagtgtttatgtcagtagataagcttaaataaaccagtccaaac 251  Q
    |||||||||||||||||| |||||||| || || ||||  |||||| | || ||| ||  | ||||||||||| ||||||| |||||| ||| |||||||    
T  31624312 aacttatggacatgtcatgagctgttttcataaattctaccaaacagtctctcaa-aacagcttatgtcagtatataagctcaaataagccaatccaaac 31624410  T
Q  252 agaccttaa 260  Q
    |||||||||    
T  31624411 agaccttaa 31624419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 206 - 257
Target Start/End: Original strand, 10016728 - 10016779
Alignment:
Q  206 acaagtgtttatgtcagtagataagcttaaataaaccagtccaaacagacct 257  Q
    ||||||||||||| | ||||||||||| |||||||||| |||||||||||||    
T  10016728 acaagtgtttatgcctgtagataagctcaaataaaccaatccaaacagacct 10016779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 106
Target Start/End: Original strand, 7713953 - 7714007
Alignment:
Q  52 catataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    |||||||||| |||||||||||||| ||  |||||||| ||||||||||||||||    
T  7713953 catataagagcttatgtataaactactttcataacaaaagataaaataaagtcaa 7714007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 150
Target Start/End: Original strand, 32975906 - 32976006
Alignment:
Q  52 catataagagattatgtataaactatttctataacaaatgataaaataaagtcaatgtttttca--ggaagctacaagttgttttcataagctattctgg 149  Q
    |||||||| | ||||||||||  ||||||| |||||||  |||||||||||||||  | |||||   ||||| | |||||||||||||||||||| ||||    
T  32975906 catataagtgtttatgtataagttatttctgtaacaaaatataaaataaagtcaaactgtttcaatagaagcaataagttgttttcataagctatcctgg 32976005  T
Q  150 a 150  Q
    |    
T  32976006 a 32976006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 63 - 103
Target Start/End: Original strand, 507159 - 507199
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagt 103  Q
    ||||||||||| ||||||||||||||| |||||||||||||    
T  507159 ttatgtataaattatttctataacaaaagataaaataaagt 507199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 154 - 190
Target Start/End: Complemental strand, 2767763 - 2767727
Alignment:
Q  154 cttatggacatgtcataagctgtttccacaagttctc 190  Q
    |||||||||||||||||||||||||||||||| ||||    
T  2767763 cttatggacatgtcataagctgtttccacaagctctc 2767727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 65 - 101
Target Start/End: Original strand, 7354145 - 7354181
Alignment:
Q  65 atgtataaactatttctataacaaatgataaaataaa 101  Q
    ||||||||||||||||||||||||| |||||||||||    
T  7354145 atgtataaactatttctataacaaaagataaaataaa 7354181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 54 - 106
Target Start/End: Complemental strand, 20672005 - 20671953
Alignment:
Q  54 tataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    |||||| |||||||||||| ||||||||| | |||| ||||||||||||||||    
T  20672005 tataagtgattatgtataagctatttctagatcaaaagataaaataaagtcaa 20671953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 29269838 - 29269878
Alignment:
Q  66 tgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    |||||||||||||||||||||| | ||||||||||||||||    
T  29269838 tgtataaactatttctataacagaagataaaataaagtcaa 29269878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 2456891 - 2456933
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    |||||||||||||||||| |||||||| ||||||||||||||||    
T  2456891 ttatgtataaactatttcgataacaaa-gataaaataaagtcaa 2456933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 2514641 - 2514684
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    |||||||||| |||||||||||| ||| ||||||||||||||||    
T  2514641 ttatgtataagctatttctataataaaagataaaataaagtcaa 2514684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 4420556 - 4420599
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    |||||||||| ||| |||||||||||| ||||||||||||||||    
T  4420556 ttatgtataagctacttctataacaaaagataaaataaagtcaa 4420599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 103
Target Start/End: Complemental strand, 8349806 - 8349755
Alignment:
Q  52 catataagagattatgtataaactatttctataacaaatgataaaataaagt 103  Q
    |||||||| | || |||||||||||||||| ||||||| |||||||||||||    
T  8349806 catataagtgtttgtgtataaactatttctctaacaaaagataaaataaagt 8349755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 24774697 - 24774740
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    |||| ||||||||||||||||||||||  |||||||||||||||    
T  24774697 ttatatataaactatttctataacaaaatataaaataaagtcaa 24774740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 106
Target Start/End: Complemental strand, 24836330 - 24836287
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    ||||||||||  ||||||||||||||| ||||||||||||||||    
T  24836330 ttatgtataagttatttctataacaaaagataaaataaagtcaa 24836287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 106
Target Start/End: Complemental strand, 29274360 - 29274317
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    |||||||||| ||||||||||| |||| ||||||||||||||||    
T  29274360 ttatgtataagctatttctatagcaaaagataaaataaagtcaa 29274317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 106
Target Start/End: Complemental strand, 33787876 - 33787833
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    |||||||||||||||||||||||||||  |||||| ||||||||    
T  33787876 ttatgtataaactatttctataacaaaatataaaacaaagtcaa 33787833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 52 - 106
Target Start/End: Original strand, 4248886 - 4248940
Alignment:
Q  52 catataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    |||||||| | |||| ||||| ||||||| |||||||| ||||||||||||||||    
T  4248886 catataagtgcttatatataagctatttcaataacaaaagataaaataaagtcaa 4248940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 52 - 106
Target Start/End: Original strand, 13360663 - 13360717
Alignment:
Q  52 catataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    |||||||| | ||||||  |||||||||||||||||||  |||||||||||||||    
T  13360663 catataagtgcttatgtgcaaactatttctataacaaaatataaaataaagtcaa 13360717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 52 - 106
Target Start/End: Complemental strand, 35095069 - 35095015
Alignment:
Q  52 catataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    ||||||||  ||||||||||||| ||||||||||||||  ||||||||| |||||    
T  35095069 catataagtaattatgtataaaccatttctataacaaaatataaaataatgtcaa 35095015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 193
Target Start/End: Complemental strand, 740902 - 740861
Alignment:
Q  152 aacttatggacatgtcataagctgtttccacaagttctctca 193  Q
    |||||||| |||||||||||| |||||||||||| |||||||    
T  740902 aacttatgaacatgtcataagttgtttccacaagctctctca 740861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 106
Target Start/End: Original strand, 6654544 - 6654597
Alignment:
Q  53 atataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    ||||||| | ||||||||||  |||||||||||||||| ||||||| |||||||    
T  6654544 atataagggcttatgtataagttatttctataacaaataataaaattaagtcaa 6654597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 106
Target Start/End: Original strand, 9732393 - 9732458
Alignment:
Q  41 taaacagttaccatataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    |||||| |||||||||||| | ||||| |||| |||||||||||  ||| |||||||| |||||||    
T  9732393 taaacatttaccatataagtgcttatgcataagctatttctatattaaaggataaaattaagtcaa 9732458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 98
Target Start/End: Complemental strand, 11784160 - 11784131
Alignment:
Q  69 ataaactatttctataacaaatgataaaat 98  Q
    ||||||||||||||||||||||||||||||    
T  11784160 ataaactatttctataacaaatgataaaat 11784131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 166 - 206
Target Start/End: Complemental strand, 7446655 - 7446615
Alignment:
Q  166 tcataagctgtttccacaagttctctcaaacaatatcacaa 206  Q
    ||||||||||||||||||||||||| |||||| | ||||||    
T  7446655 tcataagctgtttccacaagttctcccaaacagtctcacaa 7446615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 158 - 240
Target Start/End: Complemental strand, 8420207 - 8420128
Alignment:
Q  158 tggacatgtcataagctgtttccacaagttctctcaaacaatatcacaacaagtgtttatgtcagtagataagcttaaataaa 240  Q
    ||||||||||||||||| |||| | ||| |||| | |||| | ||   |||||||||||||||| |||||||||| |||||||    
T  8420207 tggacatgtcataagctatttctataagctctcactaacagtctc---acaagtgtttatgtcaatagataagctcaaataaa 8420128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 118 - 174
Target Start/End: Complemental strand, 9041510 - 9041454
Alignment:
Q  118 aagctacaagttgttttcataagctattctggagaacttatggacatgtcataagct 174  Q
    |||||| ||| |||||| || ||||||  |||||| |||||||||||||||||||||    
T  9041510 aagctataagctgtttttattagctatcgtggagagcttatggacatgtcataagct 9041454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 67 - 107
Target Start/End: Original strand, 21959671 - 21959711
Alignment:
Q  67 gtataaactatttctataacaaatgataaaataaagtcaat 107  Q
    |||||| ||||||| |||||||| |||||||||||||||||    
T  21959671 gtataagctatttccataacaaaagataaaataaagtcaat 21959711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 67 - 107
Target Start/End: Original strand, 29940739 - 29940779
Alignment:
Q  67 gtataaactatttctataacaaatgataaaataaagtcaat 107  Q
    |||||| || ||||||||||||| |||||||||||||||||    
T  29940739 gtataagctttttctataacaaaagataaaataaagtcaat 29940779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 74 - 106
Target Start/End: Original strand, 30865432 - 30865464
Alignment:
Q  74 ctatttctataacaaatgataaaataaagtcaa 106  Q
    |||||||||||||||| ||||||||||||||||    
T  30865432 ctatttctataacaaaagataaaataaagtcaa 30865464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 154 - 206
Target Start/End: Original strand, 32917253 - 32917305
Alignment:
Q  154 cttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaa 206  Q
    ||||||||||||||||||| |||||||| ||| |||| |||||| | ||||||    
T  32917253 cttatggacatgtcataagttgtttccataagctctcccaaacagtctcacaa 32917305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 207 - 255
Target Start/End: Complemental strand, 33068566 - 33068518
Alignment:
Q  207 caagtgtttatgtcagtagataagcttaaataaaccagtccaaacagac 255  Q
    |||||| ||||||||||||||||| | |||||| ||| |||||||||||    
T  33068566 caagtgcttatgtcagtagataagttcaaataagccaatccaaacagac 33068518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 2e-17; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 63 - 161
Target Start/End: Complemental strand, 49465794 - 49465696
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagtcaatgtttttcaggaagctacaagttgttttcataagctattctggagaacttatgga 161  Q
    |||||| ||| |||||| ||||||||| ||||||||||||| ||| ||||||    ||||| | |||||||||||||||||| ||||||||||||||||    
T  49465794 ttatgtgtaagctatttttataacaaaagataaaataaagttaatttttttcgtatagctaaatgttgttttcataagctatactggagaacttatgga 49465696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 118 - 239
Target Start/End: Complemental strand, 21872345 - 21872227
Alignment:
Q  118 aagctacaagttgttttcataagctattctggagaacttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaacaagtgtttat 217  Q
    |||||| |||||||||||||||||||| ||||| |  |||||||||||||||||||| ||| || ||| | |  |||||| | ||   ||||||| ||||    
T  21872345 aagctataagttgttttcataagctatcctggaaagtttatggacatgtcataagctattttcaaaagcttttccaaacagtctc---acaagtgcttat 21872249  T
Q  218 gtcagtagataagcttaaataa 239  Q
    ||||||||||||| | ||||||    
T  21872248 gtcagtagataagatcaaataa 21872227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 52 - 158
Target Start/End: Original strand, 1816510 - 1816619
Alignment:
Q  52 catataagagattatgtataaactatttct-ataacaaatgataaaataaagtcaa--tgtttttcaggaagctacaagttgttttcataagctattctg 148  Q
    |||||||||| | ||||||||||||||| | |||| ||| ||||||||||||||||  |||||||    ||| || |||||||||||||||||||| |||    
T  1816510 catataagagctaatgtataaactattttttataataaaagataaaataaagtcaaactgtttttgtataagatataagttgttttcataagctatactg 1816609  T
Q  149 gagaacttat 158  Q
    |||| |||||    
T  1816610 gagagcttat 1816619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 144
Target Start/End: Complemental strand, 40122883 - 40122801
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagtcaatgt-ttttcaggaagctacaagttgttttcataagctat 144  Q
    |||||||||| ||||||| |||||||| ||||||||||||||||  | ||||||  |||||| |||||||||| |||||||||    
T  40122883 ttatgtataagctatttcaataacaaaagataaaataaagtcaaactgttttcataaagctataagttgtttttataagctat 40122801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 152 - 201
Target Start/End: Complemental strand, 54180796 - 54180747
Alignment:
Q  152 aacttatggacatgtcataagctgtttccacaagttctctcaaacaatat 201  Q
    |||||||||||||||||||||||||||| |||||||||| || |||||||    
T  54180796 aacttatggacatgtcataagctgtttctacaagttctcacacacaatat 54180747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 2100229 - 2100141
Alignment:
Q  118 aagctacaagttgttttcataagctattctggagaacttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaa 206  Q
    |||||| |||||||||||||||| |||  |||||| |||| | |||||||||||||||| |||| ||| |||| |||||| | ||||||    
T  2100229 aagctataagttgttttcataagttatcttggagagcttaggaacatgtcataagctgtctccataagctctcacaaacagtctcacaa 2100141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 112
Target Start/End: Original strand, 41159005 - 41159097
Alignment:
Q  20 tgtttggataaacaacttaactaaacagttaccatataagagattatgtataaactatttctataacaaatgataaaataaagtcaatgtttt 112  Q
    ||||||||||| |||||||| |||||  ||| | |||||| | ||||||||||  |||| ||||||| || ||||||||||||||||| ||||    
T  41159005 tgtttggataaccaacttaattaaacgcttatcgtataagtgcttatgtataagttattcctataactaaagataaaataaagtcaatttttt 41159097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 52 - 107
Target Start/End: Complemental strand, 905112 - 905057
Alignment:
Q  52 catataagagattatgtataaactatttctataacaaatgataaaataaagtcaat 107  Q
    |||||||| | ||| |||||| |||||||||||||||| |||||||||||||||||    
T  905112 catataagcgcttaagtataagctatttctataacaaaagataaaataaagtcaat 905057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 118 - 161
Target Start/End: Original strand, 32582740 - 32582783
Alignment:
Q  118 aagctacaagttgttttcataagctattctggagaacttatgga 161  Q
    |||||||||| ||||||||||||||||| |||||||||||||||    
T  32582740 aagctacaagctgttttcataagctattttggagaacttatgga 32582783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 52 - 107
Target Start/End: Complemental strand, 41028993 - 41028938
Alignment:
Q  52 catataagagattatgtataaactatttctataacaaatgataaaataaagtcaat 107  Q
    |||||||| | |||||||||| |||||||||||||||| || ||||||||||||||    
T  41028993 catataagtgcttatgtataagctatttctataacaaaagaaaaaataaagtcaat 41028938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 152 - 253
Target Start/End: Complemental strand, 44014814 - 44014716
Alignment:
Q  152 aacttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaacaagtgtttatgtcagtagataagcttaaataaaccagtccaaac 251  Q
    |||||||| ||| |||||||||||||| || ||||| ||||||||| | ||   |||||||||||||  ||||||||| || |||||| ||| |||||||    
T  44014814 aacttatgaacaggtcataagctgttttcataagttttctcaaacagtctc---acaagtgtttatgctagtagataaactcaaataagccaatccaaac 44014718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 64 - 106
Target Start/End: Original strand, 1395611 - 1395653
Alignment:
Q  64 tatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    ||||||||| |||||||||||||||| ||||||||||||||||    
T  1395611 tatgtataagctatttctataacaaaagataaaataaagtcaa 1395653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 106
Target Start/End: Original strand, 22232767 - 22232808
Alignment:
Q  65 atgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    |||||||| |||||| ||||||||||||||||||||||||||    
T  22232767 atgtataagctatttatataacaaatgataaaataaagtcaa 22232808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 106
Target Start/End: Original strand, 38462198 - 38462263
Alignment:
Q  41 taaacagttaccatataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    |||||| ||| |||||||| | |||| ||||| ||||||||||| |||| ||||||||||||||||    
T  38462198 taaacacttatcatataagtgtttatttataagctatttctataccaaaagataaaataaagtcaa 38462263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 197
Target Start/End: Complemental strand, 42817238 - 42817193
Alignment:
Q  152 aacttatggacatgtcataagctgtttccacaagttctctcaaaca 197  Q
    ||||||||||||||||||| |||||||||| ||| |||||||||||    
T  42817238 aacttatggacatgtcatatgctgtttccataagctctctcaaaca 42817193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 63 - 103
Target Start/End: Complemental strand, 2128382 - 2128342
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagt 103  Q
    |||||||||| |||||||||||||||| |||||||||||||    
T  2128382 ttatgtataagctatttctataacaaaagataaaataaagt 2128342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 67 - 151
Target Start/End: Original strand, 21865521 - 21865605
Alignment:
Q  67 gtataaactatttctataacaaatgataaaataaagtcaatgtttttcaggaagctacaagttgttttcataagctattctggag 151  Q
    |||||| ||| |||||||||||| ||||||| || |||||||||||     |||||| |||||||||| |||||||||| |||||    
T  21865521 gtataagctagttctataacaaaagataaaacaaggtcaatgttttcatataagctataagttgttttgataagctattttggag 21865605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 154 - 206
Target Start/End: Complemental strand, 22748206 - 22748154
Alignment:
Q  154 cttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaa 206  Q
    |||||||||||| ||||| |||||||||||||||||||||  |||| ||||||    
T  22748206 cttatggacatgccataaactgtttccacaagttctctcatccaatctcacaa 22748154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 67 - 159
Target Start/End: Complemental strand, 34254936 - 34254841
Alignment:
Q  67 gtataaactatttctataacaaatgataaaataaagtcaa--tgtttttcagga-agctacaagttgttttcataagctattctggagaacttatg 159  Q
    |||||| |||||||| || |||||||||||||||||||||  ||||||| |    ||||| ||  | |||||||||||||||||||||||||||||    
T  34254936 gtataagctatttctgtagcaaatgataaaataaagtcaaactgttttttatattagctataaactattttcataagctattctggagaacttatg 34254841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 161
Target Start/End: Complemental strand, 14548795 - 14548752
Alignment:
Q  118 aagctacaagttgttttcataagctattctggagaacttatgga 161  Q
    |||||| |||||||||||||||| ||||||||||| ||||||||    
T  14548795 aagctataagttgttttcataagttattctggagagcttatgga 14548752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 106
Target Start/End: Complemental strand, 20192737 - 20192694
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    |||||||||| |||||| ||||||||| ||||||||||||||||    
T  20192737 ttatgtataagctatttatataacaaaagataaaataaagtcaa 20192694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 103
Target Start/End: Complemental strand, 22214811 - 22214772
Alignment:
Q  64 tatgtataaactatttctataacaaatgataaaataaagt 103  Q
    |||||||||| ||||||||||||||| |||||||||||||    
T  22214811 tatgtataaattatttctataacaaaggataaaataaagt 22214772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 23793528 - 23793570
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||    
T  23793528 ttatgtataaactattt-tataacaaaagataaaataaagtcaa 23793570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 34958267 - 34958310
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    ||||| ||||||||||||||||||| | ||||||||||||||||    
T  34958267 ttatgaataaactatttctataacacaagataaaataaagtcaa 34958310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 206
Target Start/End: Original strand, 43046703 - 43046774
Alignment:
Q  135 cataagctattctggagaacttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaa 206  Q
    ||||||||||  ||||||||||||| |||| ||| ||||||||| || |||||||| |||||| | ||||||    
T  43046703 cataagctatcttggagaacttatgaacatttcaaaagctgttttcataagttctcccaaacagtctcacaa 43046774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 65 - 103
Target Start/End: Original strand, 33882969 - 33883007
Alignment:
Q  65 atgtataaactatttctataacaaatgataaaataaagt 103  Q
    ||||||||| ||||||||||||||| |||||||||||||    
T  33882969 atgtataaattatttctataacaaaagataaaataaagt 33883007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 152 - 206
Target Start/End: Complemental strand, 34707512 - 34707458
Alignment:
Q  152 aacttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaa 206  Q
    ||||||||||||||||| ||| ||||| || ||||||||||||||| | ||||||    
T  34707512 aacttatggacatgtcacaagttgttttcaaaagttctctcaaacagtctcacaa 34707458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 214 - 252
Target Start/End: Complemental strand, 36832245 - 36832207
Alignment:
Q  214 ttatgtcagtagataagcttaaataaaccagtccaaaca 252  Q
    ||||||||||||| |||||||||||| ||||||||||||    
T  36832245 ttatgtcagtagaaaagcttaaataagccagtccaaaca 36832207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 64 - 106
Target Start/End: Complemental strand, 42084381 - 42084339
Alignment:
Q  64 tatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    ||||||||| |||||||||||||||| |||||||||| |||||    
T  42084381 tatgtataagctatttctataacaaaggataaaataatgtcaa 42084339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 52 - 106
Target Start/End: Complemental strand, 44374786 - 44374732
Alignment:
Q  52 catataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    |||||||| | |||||||||| |||| ||| ||||||| ||||||||||||||||    
T  44374786 catataagtgcttatgtataagctatatctttaacaaaagataaaataaagtcaa 44374732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 68 - 106
Target Start/End: Complemental strand, 49587042 - 49587004
Alignment:
Q  68 tataaactatttctataacaaatgataaaataaagtcaa 106  Q
    ||||| |||||||||||||||| ||||||||||||||||    
T  49587042 tataagctatttctataacaaaagataaaataaagtcaa 49587004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 158 - 230
Target Start/End: Complemental strand, 53735982 - 53735913
Alignment:
Q  158 tggacatgtcataagctgtttccacaagttctctcaaacaatatcacaacaagtgtttatgtcagtagataag 230  Q
    ||||||||||||||| |||||| | ||||||||||||||||| ||   |  |||||||||||||||| |||||    
T  53735982 tggacatgtcataagttgtttcaataagttctctcaaacaatctc---attagtgtttatgtcagtaaataag 53735913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 197
Target Start/End: Original strand, 37273188 - 37273233
Alignment:
Q  152 aacttatggacatgtcataagctgtttccacaagttctctcaaaca 197  Q
    ||||||||||||||||||||| |||||||| ||| |||| ||||||    
T  37273188 aacttatggacatgtcataagttgtttccataagctctcccaaaca 37273233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 106
Target Start/End: Complemental strand, 48365012 - 48364967
Alignment:
Q  61 gattatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    ||||||||||||  |||||| |||||||| ||||||||||||||||    
T  48365012 gattatgtataagttatttcgataacaaaagataaaataaagtcaa 48364967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 104
Target Start/End: Original strand, 48588552 - 48588645
Alignment:
Q  11 attaagctatgtttggataaacaacttaactaaacagttaccatataagagattatgtataaactatttctataacaaatgataaaataaagtc 104  Q
    |||| ||| |||||| ||||||||||||| ||| |  ||| |||||||||| |||  |||||  ||||||||||| |||  |||||||||||||    
T  48588552 attaggctctgtttgaataaacaacttaattaagctcttatcatataagagcttacatataagttatttctataataaaatataaaataaagtc 48588645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 152 - 180
Target Start/End: Complemental strand, 1217816 - 1217788
Alignment:
Q  152 aacttatggacatgtcataagctgtttcc 180  Q
    |||||||||||||||||||||||||||||    
T  1217816 aacttatggacatgtcataagctgtttcc 1217788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 55 - 99
Target Start/End: Complemental strand, 2304380 - 2304336
Alignment:
Q  55 ataagagattatgtataaactatttctataacaaatgataaaata 99  Q
    ||||| |||||||||||| |||||||||||| ||| |||||||||    
T  2304380 ataagtgattatgtataagctatttctataataaaagataaaata 2304336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 214 - 250
Target Start/End: Complemental strand, 18405788 - 18405752
Alignment:
Q  214 ttatgtcagtagataagcttaaataaaccagtccaaa 250  Q
    ||||||||||||||||||| |||||||||| ||||||    
T  18405788 ttatgtcagtagataagctcaaataaaccaatccaaa 18405752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 214 - 250
Target Start/End: Complemental strand, 24158473 - 24158437
Alignment:
Q  214 ttatgtcagtagataagcttaaataaaccagtccaaa 250  Q
    |||||||||||||||||||||||||| ||| ||||||    
T  24158473 ttatgtcagtagataagcttaaataagccaatccaaa 24158437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 63 - 103
Target Start/End: Complemental strand, 35394832 - 35394792
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagt 103  Q
    |||||||||| |||||||||||| ||| |||||||||||||    
T  35394832 ttatgtataatctatttctataataaaagataaaataaagt 35394792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 63 - 103
Target Start/End: Original strand, 36445671 - 36445711
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagt 103  Q
    |||||||||| |||||||||||||||| || ||||||||||    
T  36445671 ttatgtataagctatttctataacaaaagagaaaataaagt 36445711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 152 - 196
Target Start/End: Original strand, 41724266 - 41724310
Alignment:
Q  152 aacttatggacatgtcataagctgtttccacaagttctctcaaac 196  Q
    ||||||||||||||||||||| |||||||| ||||| || |||||    
T  41724266 aacttatggacatgtcataagttgtttccataagttttcacaaac 41724310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 66 - 159
Target Start/End: Complemental strand, 44061151 - 44061056
Alignment:
Q  66 tgtataaactatttctataacaaatgataaaataaagtcaa--tgtttttcaggaagctacaagttgttttcataagctattctggagaacttatg 159  Q
    ||||||| ||||||||||| |||| |||||||||| || ||  ||||||||   |||||| |||||||||||||| | |||  | |||||||||||    
T  44061151 tgtataagctatttctatagcaaaagataaaataaggttaaattgtttttctataagctataagttgttttcatatgatatcttagagaacttatg 44061056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 3e-16; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 65 - 178
Target Start/End: Complemental strand, 28340525 - 28340410
Alignment:
Q  65 atgtataaactatttctataacaaatgataaaataaagtcaa--tgtttttcaggaagctacaagttgttttcataagctattctggagaacttatggac 162  Q
    |||||||| ||||||||  ||||||  |||||||||||||||  ||||||   | ||| || |||||||||||| ||||||| ||||||| |||||||||    
T  28340525 atgtataagctatttcttcaacaaacaataaaataaagtcaaactgttttcatgtaagttataagttgttttcagaagctatgctggagagcttatggac 28340426  T
Q  163 atgtcataagctgttt 178  Q
    |||||||||| |||||    
T  28340425 atgtcataagttgttt 28340410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 125 - 190
Target Start/End: Complemental strand, 29574668 - 29574603
Alignment:
Q  125 aagttgttttcataagctattctggagaacttatggacatgtcataagctgtttccacaagttctc 190  Q
    |||||||||||||| |||||  ||||||  ||||||||||||||||||||||||||| ||||||||    
T  29574668 aagttgttttcatatgctatcatggagaggttatggacatgtcataagctgtttccataagttctc 29574603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 7513529 - 7513612
Alignment:
Q  19 atgtttggataaacaacttaactaaacagttaccatataagagattatgtataaactatttctataacaaatgataaaataaag 102  Q
    ||||||||||||| ||||||||||| ||  ||||||||||| | |||||||||| |||||| ||  ||||| ||||||||||||    
T  7513529 atgtttggataaaaaacttaactaagcatgtaccatataagtgcttatgtataagctatttttaagacaaaagataaaataaag 7513612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 46056183 - 46056041
Alignment:
Q  19 atgtttggataaacaacttaactaaacagttaccatataagagattatgtataaactatttctataacaaatgataaaataaagtc-aatgtttttcagg 117  Q
    ||||||||||||||||||||| ||| || ||| ||| |||| | |||||| ||||||||||||||  || |  ||||||||||| | |||||||||  |     
T  46056183 atgtttggataaacaacttaattaagcatttatcatttaagtgcttatgtgtaaactatttctat-gcagaacataaaataaagccaaatgtttttgtgt 46056085  T
Q  118 aagctacaagttgttttcataagctattctggagaacttatgga 161  Q
    |||||| || ||||||||||||||||| | | ||| ||||||||    
T  46056084 aagctataaattgttttcataagctatcccgtagagcttatgga 46056041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 206
Target Start/End: Original strand, 36537962 - 36538016
Alignment:
Q  152 aacttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaa 206  Q
    |||||||| |||||||||||| |||||||| ||||||||||||||||| ||||||    
T  36537962 aacttatgaacatgtcataagttgtttccataagttctctcaaacaatctcacaa 36538016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 75 - 199
Target Start/End: Complemental strand, 39591586 - 39591467
Alignment:
Q  75 tatttctataacaaatgataaaataaagtcaatgt-ttttcaggaagctacaagttgttttcataagctattctggagaacttatggacatgtcataagc 173  Q
    ||||||||||||||| ||||||||||||||||  | ||||||      || |||||||||| ||||| | | ||||||| |||||||| |||||||| |     
T  39591586 tatttctataacaaaagataaaataaagtcaaattgttttca------tataagttgttttgataagttttgctggagagcttatggatatgtcatagga 39591493  T
Q  174 tgtttccacaagttctctcaaacaat 199  Q
    |||||||| ||| |||||||||||||    
T  39591492 tgtttccataagctctctcaaacaat 39591467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 1417203 - 1417246
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||    
T  1417203 ttatgtataaactatttatataacaaaagataaaataaagtcaa 1417246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 155 - 206
Target Start/End: Complemental strand, 27626136 - 27626085
Alignment:
Q  155 ttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaa 206  Q
    ||||||||||||||||||||||||||| ||| | ||||||||||| ||||||    
T  27626136 ttatggacatgtcataagctgtttccataagctttctcaaacaatctcacaa 27626085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 30496643 - 30496686
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    |||||||||||||||||||||||||||  |||||||||||||||    
T  30496643 ttatgtataaactatttctataacaaaatataaaataaagtcaa 30496686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 155 - 239
Target Start/End: Complemental strand, 20547403 - 20547322
Alignment:
Q  155 ttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaacaagtgtttatgtcagtagataagcttaaataa 239  Q
    |||| ||||||||||| ||||| |||| ||| ||||||||||| ||||   |||||||||||||||| ||||||| || ||||||    
T  20547403 ttatcgacatgtcataggctgtctccataagctctctcaaacagtatc---acaagtgtttatgtcattagataaactaaaataa 20547322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 106
Target Start/End: Original strand, 1792438 - 1792475
Alignment:
Q  69 ataaactatttctataacaaatgataaaataaagtcaa 106  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  1792438 ataaactatttctataacaaatgatgaaataaagtcaa 1792475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 106
Target Start/End: Complemental strand, 43318653 - 43318616
Alignment:
Q  69 ataaactatttctataacaaatgataaaataaagtcaa 106  Q
    |||| |||||||||||||||||||||||||||||||||    
T  43318653 ataagctatttctataacaaatgataaaataaagtcaa 43318616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 118 - 206
Target Start/End: Complemental strand, 27517355 - 27517267
Alignment:
Q  118 aagctacaagttgttttcataagctattctggagaacttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaa 206  Q
    |||||||||  |||||||||||| ||| ||||||| ||||||||||||| || ||  ||||||| ||  ||||||||||| | ||||||    
T  27517355 aagctacaaactgttttcataagttatcctggagagcttatggacatgttatgagtggtttccataaactctctcaaacagtctcacaa 27517267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 65 - 105
Target Start/End: Original strand, 28178910 - 28178950
Alignment:
Q  65 atgtataaactatttctataacaaatgataaaataaagtca 105  Q
    |||||||| |||||||||||||||| |||||||||||||||    
T  28178910 atgtataagctatttctataacaaaagataaaataaagtca 28178950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 154 - 206
Target Start/End: Complemental strand, 36598370 - 36598318
Alignment:
Q  154 cttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaa 206  Q
    |||||| |||||||||||| |||||||| ||| ||||||||||||| ||||||    
T  36598370 cttatgaacatgtcataagatgtttccataagctctctcaaacaatctcacaa 36598318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 113
Target Start/End: Original strand, 25511569 - 25511616
Alignment:
Q  66 tgtataaactatttctataacaaatgataaaataaagtcaatgttttt 113  Q
    |||||||| ||||||||||||||| ||| ||||||||||||| |||||    
T  25511569 tgtataaattatttctataacaaaagatgaaataaagtcaattttttt 25511616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 106
Target Start/End: Complemental strand, 27121717 - 27121674
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    ||||||||||  ||||||||||| ||||||||||||||||||||    
T  27121717 ttatgtataagatatttctataataaatgataaaataaagtcaa 27121674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 206
Target Start/End: Complemental strand, 27508369 - 27508294
Alignment:
Q  131 ttttcataagctattctggagaacttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaa 206  Q
    |||||||||||||| ||  ||| ||||||||||||| |||||  ||||||| || |||||||||||| | ||||||    
T  27508369 ttttcataagctatccttaagagcttatggacatgttataagtggtttccataaattctctcaaacagtctcacaa 27508294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 31341133 - 31341176
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    |||||||||| |||||| ||||||||| ||||||||||||||||    
T  31341133 ttatgtataagctatttgtataacaaaagataaaataaagtcaa 31341176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 35536046 - 35536089
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    |||||||||| |||||||||||||| | ||||||||||||||||    
T  35536046 ttatgtataagctatttctataacataagataaaataaagtcaa 35536089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 106
Target Start/End: Complemental strand, 35809035 - 35808992
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    |||||||||| |||||||||||||||| ||||||||| ||||||    
T  35809035 ttatgtataagctatttctataacaaaagataaaatatagtcaa 35808992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 42656454 - 42656497
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    |||| ||||| |||||||||||||||| ||||||||||||||||    
T  42656454 ttatatataagctatttctataacaaaagataaaataaagtcaa 42656497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 47006970 - 47007025
Alignment:
Q  46 agttaccatataagagattatgtataaactatttctataacaaatgataaaataaa 101  Q
    ||||| |||||||| | ||||||||||||| ||||||||||||| ||| |||||||    
T  47006970 agttatcatataagtgcttatgtataaactttttctataacaaaagatcaaataaa 47007025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 49060479 - 49060522
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    |||||||||| ||||||||||||||||  |||||||||||||||    
T  49060479 ttatgtataagctatttctataacaaaaaataaaataaagtcaa 49060522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 72 - 106
Target Start/End: Original strand, 2999139 - 2999173
Alignment:
Q  72 aactatttctataacaaatgataaaataaagtcaa 106  Q
    |||||||||||||||||| ||||||||||||||||    
T  2999139 aactatttctataacaaaagataaaataaagtcaa 2999173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 64 - 106
Target Start/End: Complemental strand, 5006639 - 5006597
Alignment:
Q  64 tatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    ||||||||| ||||| |||||||||| ||||||||||||||||    
T  5006639 tatgtataagctattcctataacaaaagataaaataaagtcaa 5006597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 5272951 - 5272909
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagtca 105  Q
    ||||||||||||||||| ||||||||| |||||||| ||||||    
T  5272951 ttatgtataaactatttatataacaaaagataaaattaagtca 5272909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 152 - 198
Target Start/End: Complemental strand, 6857355 - 6857309
Alignment:
Q  152 aacttatggacatgtcataagctgtttccacaagttctctcaaacaa 198  Q
    |||||||||||||| ||||||||||||||| ||| |||||| |||||    
T  6857355 aacttatggacatggcataagctgtttccataagctctctcgaacaa 6857309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 52 - 106
Target Start/End: Original strand, 7244630 - 7244684
Alignment:
Q  52 catataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    |||||||| | |||||||||| ||||||||||| |||| ||||||| ||||||||    
T  7244630 catataagtgcttatgtataagctatttctatatcaaaagataaaagaaagtcaa 7244684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 52 - 106
Target Start/End: Original strand, 24973872 - 24973926
Alignment:
Q  52 catataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    |||||||| | ||||||| || |||||||||||||||| ||||||||||| ||||    
T  24973872 catataagtgcttatgtaaaagctatttctataacaaaagataaaataaattcaa 24973926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 152 - 252
Target Start/End: Original strand, 33894681 - 33894778
Alignment:
Q  152 aacttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaacaagtgtttatgtcagtagataagcttaaataaaccagtccaaac 251  Q
    ||||||||||||||||||| ||||||| || ||| |||| |||||| | ||   ||||||| |||||||| | |||||||| |||||| | | |||||||    
T  33894681 aacttatggacatgtcatatgctgttttcataagctctcacaaacagtctc---acaagtgcttatgtcatttgataagctcaaataagctaatccaaac 33894777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 63 - 101
Target Start/End: Complemental strand, 36874096 - 36874058
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaa 101  Q
    |||||||||| |||||||||||| |||||||||||||||    
T  36874096 ttatgtataagctatttctataagaaatgataaaataaa 36874058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 129 - 159
Target Start/End: Original strand, 44821966 - 44821996
Alignment:
Q  129 tgttttcataagctattctggagaacttatg 159  Q
    |||||||||||||||||||||||||||||||    
T  44821966 tgttttcataagctattctggagaacttatg 44821996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 106
Target Start/End: Complemental strand, 753357 - 753292
Alignment:
Q  41 taaacagttaccatataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    |||||| ||| |||||||| | || |||||| |||||||||||||||||  || ||||||||||||    
T  753357 taaacatttatcatataagcgcttgtgtatacactatttctataacaaaatatgaaataaagtcaa 753292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 102
Target Start/End: Complemental strand, 2727489 - 2727452
Alignment:
Q  65 atgtataaactatttctataacaaatgataaaataaag 102  Q
    ||||||| ||||||||||||||||| ||||||||||||    
T  2727489 atgtatagactatttctataacaaaagataaaataaag 2727452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 253
Target Start/End: Complemental strand, 3610754 - 3610658
Alignment:
Q  154 cttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaacaagtgtttatgtcagtagataagcttaaataaaccagtccaaacag 253  Q
    |||||||||||||||| ||||||||||| ||| | || |||| | ||||   ||||||| ||| | ||||||||||||| |||||| ||| | |||||||    
T  3610754 cttatggacatgtcattagctgtttccataaggtttcccaaaaagtatc---acaagtggttaggccagtagataagctcaaataagccaattcaaacag 3610658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 267
Target Start/End: Complemental strand, 3968588 - 3968535
Alignment:
Q  214 ttatgtcagtagataagcttaaataaaccagtccaaacagaccttaagtggttt 267  Q
    ||||| |||||||||| || |||||||| | |||||||||||| ||||||||||    
T  3968588 ttatggcagtagataacctcaaataaactaatccaaacagaccctaagtggttt 3968535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 104
Target Start/End: Original strand, 5373164 - 5373205
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagtc 104  Q
    |||||||||  |||||||||||||||| ||||||||||||||    
T  5373164 ttatgtatatgctatttctataacaaaagataaaataaagtc 5373205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 106
Target Start/End: Complemental strand, 27481435 - 27481382
Alignment:
Q  53 atataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    ||||||| | |||||||||| |||||||||||||||| |||||||  |||||||    
T  27481435 atataagtgtttatgtataagctatttctataacaaaggataaaacgaagtcaa 27481382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 100
Target Start/End: Original strand, 33894562 - 33894599
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataa 100  Q
    |||||||||| |||||||||||||||| ||||||||||    
T  33894562 ttatgtataagctatttctataacaaaagataaaataa 33894599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 43153030 - 43152993
Alignment:
Q  66 tgtataaactatttctataacaaatgataaaataaagt 103  Q
    ||||||| |||||||||||||||| |||||||||||||    
T  43153030 tgtataagctatttctataacaaaagataaaataaagt 43152993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 88
Target Start/End: Original strand, 48496599 - 48496667
Alignment:
Q  19 atgtttggataaacaacttaactaaacagttaccatataagagattatgtataaactatttctataacaa 88  Q
    ||||||||||||||||||| | ||| || ||| ||||||||   |||||||||||||||||||| |||||    
T  48496599 atgtttggataaacaacttgattaagcacttatcatataagtt-ttatgtataaactatttctacaacaa 48496667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 54 - 106
Target Start/End: Original strand, 2223078 - 2223130
Alignment:
Q  54 tataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    |||||| | |||||||||| |||||||||||||||| ||||||  ||||||||    
T  2223078 tataagtgtttatgtataagctatttctataacaaaagataaagaaaagtcaa 2223130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 155 - 199
Target Start/End: Original strand, 30134106 - 30134150
Alignment:
Q  155 ttatggacatgtcataagctgtttccacaagttctctcaaacaat 199  Q
    |||| |||||||||||||||||||||| ||| | |||||||||||    
T  30134106 ttatagacatgtcataagctgtttccataagctttctcaaacaat 30134150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 125 - 161
Target Start/End: Original strand, 39505959 - 39505995
Alignment:
Q  125 aagttgttttcataagctattctggagaacttatgga 161  Q
    ||||||||||||||||||||||||||||  |||||||    
T  39505959 aagttgttttcataagctattctggagagtttatgga 39505995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 52 - 104
Target Start/End: Original strand, 46213731 - 46213783
Alignment:
Q  52 catataagagattatgtataaactatttctataacaaatgataaaataaagtc 104  Q
    |||||||| | ||||||| || ||||||||||||||||  |||||||||||||    
T  46213731 catataagtgcttatgtaaaagctatttctataacaaaatataaaataaagtc 46213783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 208 - 256
Target Start/End: Complemental strand, 47046071 - 47046023
Alignment:
Q  208 aagtgtttatgtcagtagataagcttaaataaaccagtccaaacagacc 256  Q
    ||||||||||||||||||||||||  ||||||  || ||||||||||||    
T  47046071 aagtgtttatgtcagtagataagcacaaataagtcaatccaaacagacc 47046023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 64 - 159
Target Start/End: Original strand, 11802475 - 11802571
Alignment:
Q  64 tatgtataaactatttctataacaaatgataaaataaagtcaatgtttt-tcagg-aagctacaagttgttttcataagctattctggagaacttatg 159  Q
    ||||||||| ||||| |||||||||| ||||||||||||||||  |||| |||   |||||||||||||||||||||||||||| |||||| ||||||    
T  11802475 tatgtataagctatt-ctataacaaaagataaaataaagtcaaatttttctcacataagctacaagttgttttcataagctattatggagagcttatg 11802571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 128 - 180
Target Start/End: Original strand, 7730630 - 7730682
Alignment:
Q  128 ttgttttcataagctattctggagaacttatggacatgtcataagctgtttcc 180  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||| |||||||    
T  7730630 ttgttttcataagctatcctggagagcttatggacatgtcataagttgtttcc 7730682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 52 - 144
Target Start/End: Original strand, 18630608 - 18630702
Alignment:
Q  52 catataagagattatgtataaactatttctataacaaatgataaaataaagtcaat-gtttttcagg-aagctacaagttgttttcataagctat 144  Q
    |||||||| | ||||| |||||||||||| |||||||| ||||||||||||||||| | ||||||   |||||| |||||||||||| |||||||    
T  18630608 catataagcgcttatgcataaactatttcaataacaaaagataaaataaagtcaattggttttcatataagctataagttgttttcacaagctat 18630702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 206
Target Start/End: Original strand, 19304980 - 19305034
Alignment:
Q  152 aacttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaa 206  Q
    ||||||||||||||||||||||||||||||||| ||||| || ||||| ||||||    
T  19304980 aacttatggacatgtcataagctgtttccacaaattctcccacacaatctcacaa 19305034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 129 - 172
Target Start/End: Original strand, 8147899 - 8147942
Alignment:
Q  129 tgttttcataagctattctggagaacttatggacatgtcataag 172  Q
    |||||||||||||||| || ||||||||||||||||||||||||    
T  8147899 tgttttcataagctatcctagagaacttatggacatgtcataag 8147942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 19 - 106
Target Start/End: Original strand, 19422313 - 19422400
Alignment:
Q  19 atgtttggataaacaacttaactaaacagttaccatataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    ||||||||||||||| ||||| ||| |  ||| |||||||  | ||||||||||  ||||||||||||||| |||| |||||||||||    
T  19422313 atgtttggataaacagcttaattaagcgcttatcatataaatgcttatgtataagttatttctataacaaaagatataataaagtcaa 19422400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 63 - 106
Target Start/End: Complemental strand, 21593142 - 21593099
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    |||||||||||||||||||||||| || ||||||||||||||||    
T  21593142 ttatgtataaactatttctataactaaagataaaataaagtcaa 21593099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 63 - 106
Target Start/End: Complemental strand, 51044590 - 51044547
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    |||||||||| |||||||||||||||| ||||||||||||||||    
T  51044590 ttatgtataagctatttctataacaaaagataaaataaagtcaa 51044547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 48 - 106
Target Start/End: Original strand, 4071807 - 4071864
Alignment:
Q  48 ttaccatataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    |||||||||||| | |||| ||||| |||||||||||||||| ||||||||||||||||    
T  4071807 ttaccatataagtgtttatatataa-ctatttctataacaaaagataaaataaagtcaa 4071864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 256
Target Start/End: Original strand, 28615389 - 28615489
Alignment:
Q  152 aacttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaacaagtgtttatgtcagtagataagcttaaataaaccagtccaaac 251  Q
    |||||||| | ||||||| |||||||| || |||||||| |||||||| ||||||   |||||||||  ||||||||| |||||||||  || |||||||    
T  28615389 aacttatgaaaatgtcattagctgttttcataagttctc-caaacaatctcacaa---gtgtttatgctagtagataaacttaaataagtcaatccaaac 28615484  T
Q  252 agacc 256  Q
    |||||    
T  28615485 agacc 28615489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 98
Target Start/End: Complemental strand, 45128452 - 45128406
Alignment:
Q  52 catataagagattatgtataaactatttctataacaaatgataaaat 98  Q
    |||||||||  ||||||||||||||||||||||||||| ||||||||    
T  45128452 catataagaacttatgtataaactatttctataacaaaagataaaat 45128406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 106
Target Start/End: Original strand, 47970246 - 47970300
Alignment:
Q  52 catataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    |||||||| | |||||||||| |||||||||||||||| |||||||| |||||||    
T  47970246 catataagtgcttatgtataagctatttctataacaaaagataaaatgaagtcaa 47970300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 106
Target Start/End: Complemental strand, 54325179 - 54325125
Alignment:
Q  52 catataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    |||||||| | || |||||||||||||||||| ||||| ||||||||||||||||    
T  54325179 catataagtgcttgtgtataaactatttctattacaaaagataaaataaagtcaa 54325125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 142
Target Start/End: Complemental strand, 24160662 - 24160545
Alignment:
Q  27 ataaacaacttaactaaacagttaccatataagagattatgtataaactatttctataacaaatgataaaataaagtcaatgt-ttttca-ggaagctac 124  Q
    ||||||||||||| |||||  ||| |||||||| | ||||  |||| || ||||||||||||| ||||| ||||| ||||  | |||||| | ||||||     
T  24160662 ataaacaacttaattaaacgcttatcatataagtgcttataaataagctttttctataacaaaagataatataaattcaaactattttcatgtaagctat 24160563  T
Q  125 aagttgttttcataagct 142  Q
    ||||||||||||||||||    
T  24160562 aagttgttttcataagct 24160545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 63 - 103
Target Start/End: Original strand, 6364088 - 6364128
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagt 103  Q
    |||||||||| |||||||||||||||| |||||||||||||    
T  6364088 ttatgtataagctatttctataacaaaagataaaataaagt 6364128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 128 - 168
Target Start/End: Complemental strand, 11262827 - 11262787
Alignment:
Q  128 ttgttttcataagctattctggagaacttatggacatgtca 168  Q
    ||||||||||||||||| ||||||| |||||||||||||||    
T  11262827 ttgttttcataagctatcctggagagcttatggacatgtca 11262787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 63 - 103
Target Start/End: Complemental strand, 21683610 - 21683570
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagt 103  Q
    ||||||||||||||||||||||||||| ||||| |||||||    
T  21683610 ttatgtataaactatttctataacaaaagataagataaagt 21683570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 63 - 103
Target Start/End: Complemental strand, 30338723 - 30338683
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagt 103  Q
    ||||||||||||||||||||||||||| |||| ||||||||    
T  30338723 ttatgtataaactatttctataacaaaagatagaataaagt 30338683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 54277442 - 54277402
Alignment:
Q  66 tgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    ||||||||||| |||||||||||| ||||||||||||||||    
T  54277442 tgtataaactacttctataacaaaagataaaataaagtcaa 54277402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 144
Target Start/End: Original strand, 3155543 - 3155625
Alignment:
Q  64 tatgtataaactatttctataacaaatgataaaataaagtcaa--tgtttttcaggaagctacaagttgttttcataagctat 144  Q
    ||||||||| ||||||||||| |||| ||||||||||||| ||  |||||||    |||||||||| ||||||||||| ||||    
T  3155543 tatgtataagctatttctatagcaaaagataaaataaagttaaattgtttttgtacaagctacaagctgttttcataaactat 3155625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 106
Target Start/End: Original strand, 4191667 - 4191722
Alignment:
Q  52 catataagagattatgtataaactatttctataacaaatgat-aaaataaagtcaa 106  Q
    |||||||| | |||||||||| |||||||||||||||| ||| |||||||||||||    
T  4191667 catataagtgcttatgtataagctatttctataacaaaagataaaaataaagtcaa 4191722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 106
Target Start/End: Complemental strand, 20936129 - 20936090
Alignment:
Q  67 gtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    ||||| ||||||||||||||||| ||||||||||||||||    
T  20936129 gtatagactatttctataacaaaagataaaataaagtcaa 20936090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 106
Target Start/End: Complemental strand, 42322010 - 42321967
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    ||||| |||| |||||| ||||||||||||||||||||||||||    
T  42322010 ttatgaataagctatttttataacaaatgataaaataaagtcaa 42321967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 20 - 102
Target Start/End: Original strand, 14011130 - 14011212
Alignment:
Q  20 tgtttggataaacaacttaactaaacagttaccatataagagattatgtataaactatttctataacaaatgataaaataaag 102  Q
    |||||||||||||||||||| |||    ||| |||||||  |||| ||||||| ||| || ||||||||| ||||||||||||    
T  14011130 tgtttggataaacaacttaattaagtgtttatcatataaatgattgtgtataagctagttttataacaaaagataaaataaag 14011212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 66 - 104
Target Start/End: Original strand, 24929435 - 24929473
Alignment:
Q  66 tgtataaactatttctataacaaatgataaaataaagtc 104  Q
    ||||| |||||||||||||||||| ||||||||||||||    
T  24929435 tgtatgaactatttctataacaaaagataaaataaagtc 24929473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 25487676 - 25487634
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagtca 105  Q
    |||||||||| ||||||||||||||||  ||||||||||||||    
T  25487676 ttatgtataagctatttctataacaaaaaataaaataaagtca 25487634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 52 - 106
Target Start/End: Original strand, 36734821 - 36734875
Alignment:
Q  52 catataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    |||||||| | |||||||||| || ||||||||||||| | ||||||||||||||    
T  36734821 catataagtgcttatgtataatctctttctataacaaaaggtaaaataaagtcaa 36734875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 52 - 159
Target Start/End: Original strand, 44319878 - 44319986
Alignment:
Q  52 catataagagattatgtataaactatttctataacaaatgataaaataaagtc--aatgtttttcaggaagctacaagttgttttcataagctattctgg 149  Q
    |||||||| | | ||||||||||||||||||||| ||| ||||||||||||||  | ||||||     |||||||||| | |||| ||||||||| || |    
T  44319878 catataagtgctcatgtataaactatttctataa-aaaagataaaataaagtcgaactgttttcatataagctacaagctattttgataagctatcctag 44319976  T
Q  150 agaacttatg 159  Q
    ||||||||||    
T  44319977 agaacttatg 44319986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 107
Target Start/End: Complemental strand, 969517 - 969432
Alignment:
Q  22 tttggataaacaacttaactaaacagttaccatataagagattatgtataaactatttctataacaaatgataaaataaagtcaat 107  Q
    ||||||||||||||||||  || |  ||| |||||||| | |||| ||||| | |||||||||| ||| | |||||||||||||||    
T  969517 tttggataaacaacttaatcaagcgcttatcatataagtgcttatctataagcaatttctataataaaaggtaaaataaagtcaat 969432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 196
Target Start/End: Original strand, 1075509 - 1075550
Alignment:
Q  155 ttatggacatgtcataagctgtttccacaagttctctcaaac 196  Q
    ||||||||||||||||||||||||| | |||||||| |||||    
T  1075509 ttatggacatgtcataagctgtttctagaagttctcccaaac 1075550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 106
Target Start/End: Original strand, 3662293 - 3662330
Alignment:
Q  69 ataaactatttctataacaaatgataaaataaagtcaa 106  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  3662293 ataaactattcctataacaaaagataaaataaagtcaa 3662330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 102
Target Start/End: Original strand, 4471100 - 4471149
Alignment:
Q  53 atataagagattatgtataaactatttctataacaaatgataaaataaag 102  Q
    ||||||| | ||||| ||||||||||| ||||||||| ||||||||||||    
T  4471100 atataagtgcttatgcataaactatttttataacaaaagataaaataaag 4471149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 104
Target Start/End: Complemental strand, 4798690 - 4798649
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagtc 104  Q
    |||||||||| ||||||||||| |||| ||||||||||||||    
T  4798690 ttatgtataagctatttctatatcaaaagataaaataaagtc 4798649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 112
Target Start/End: Complemental strand, 8422968 - 8422919
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagtcaatgtttt 112  Q
    |||||||||| |||||| ||||| ||| ||||||||||||||| ||||||    
T  8422968 ttatgtataagctatttttataaaaaaagataaaataaagtcattgtttt 8422919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 101
Target Start/End: Original strand, 11264229 - 11264278
Alignment:
Q  52 catataagagattatgtataaactatttctataacaaatgataaaataaa 101  Q
    |||||||| ||||||||||||||||||||  ||| ||| |||||||||||    
T  11264229 catataagtgattatgtataaactatttcactaataaaagataaaataaa 11264278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 239
Target Start/End: Complemental strand, 18512480 - 18512447
Alignment:
Q  206 acaagtgtttatgtcagtagataagcttaaataa 239  Q
    ||||||||||||||||||||||||||| ||||||    
T  18512480 acaagtgtttatgtcagtagataagctcaaataa 18512447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 106
Target Start/End: Original strand, 21953214 - 21953255
Alignment:
Q  65 atgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    ||||||||||||||||||||||||| |  |||||||||||||    
T  21953214 atgtataaactatttctataacaaaagggaaaataaagtcaa 21953255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 194
Target Start/End: Original strand, 27623641 - 27623710
Alignment:
Q  125 aagttgttttcataagctattctggagaacttatggacatgtcataagctgtttccacaagttctctcaa 194  Q
    |||||||||||||||| ||| ||||||| ||||||  ||||||||| | |||||||| || || ||||||    
T  27623641 aagttgttttcataagttatcctggagagcttatgagcatgtcataggttgtttccataaattttctcaa 27623710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 243
Target Start/End: Original strand, 47970401 - 47970438
Alignment:
Q  206 acaagtgtttatgtcagtagataagcttaaataaacca 243  Q
    ||||||| ||||||||||||||||||| ||||||||||    
T  47970401 acaagtgcttatgtcagtagataagctcaaataaacca 47970438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 105
Target Start/End: Complemental strand, 51556009 - 51555956
Alignment:
Q  52 catataagagattatgtataaactatttctataacaaatgataaaataaagtca 105  Q
    |||||||| | |||||||||| |||||  ||||||||| |||||||||||||||    
T  51556009 catataagtgcttatgtataagctattattataacaaaagataaaataaagtca 51555956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 103
Target Start/End: Complemental strand, 54575720 - 54575679
Alignment:
Q  62 attatgtataaactatttctataacaaatgataaaataaagt 103  Q
    |||||||||||||| ||||||||||||| ||||||| |||||    
T  54575720 attatgtataaactttttctataacaaaagataaaacaaagt 54575679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 125 - 197
Target Start/End: Complemental strand, 1408363 - 1408291
Alignment:
Q  125 aagttgttttcataagctattctggagaacttatggacatgtcataagctgtttccacaagttctctcaaaca 197  Q
    |||||| ||||||||||||   | ||||  |||||||||||| ||||||||||| || || ||||||||||||    
T  1408363 aagttgctttcataagctaacttcgagagtttatggacatgtaataagctgttttcataaattctctcaaaca 1408291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 67 - 144
Target Start/End: Original strand, 3175894 - 3175973
Alignment:
Q  67 gtataaactatttctataacaaatgataaaataaagtcaa--tgtttttcaggaagctacaagttgttttcataagctat 144  Q
    |||||| ||| ||||||| |||| ||||||||||||||||  ||||||  || ||| || ||| ||||||||||||||||    
T  3175894 gtataagctacttctatagcaaaagataaaataaagtcaaattgttttcaagtaagttataagctgttttcataagctat 3175973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 206 - 238
Target Start/End: Complemental strand, 18628518 - 18628486
Alignment:
Q  206 acaagtgtttatgtcagtagataagcttaaata 238  Q
    ||||||||||||||||||||||||||| |||||    
T  18628518 acaagtgtttatgtcagtagataagctcaaata 18628486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 22684644 - 22684604
Alignment:
Q  66 tgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    ||||||| |||||||||||||||| | ||||||||||||||    
T  22684644 tgtataagctatttctataacaaacggtaaaataaagtcaa 22684604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 63 - 103
Target Start/End: Original strand, 24160929 - 24160969
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagt 103  Q
    |||||||||| |||||||||||||||| |||||||| ||||    
T  24160929 ttatgtataagctatttctataacaaaggataaaatcaagt 24160969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 63 - 103
Target Start/End: Complemental strand, 26520360 - 26520320
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagt 103  Q
    ||||||||||||| ||||||||||||| ||| |||||||||    
T  26520360 ttatgtataaactgtttctataacaaaagatgaaataaagt 26520320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 47 - 106
Target Start/End: Complemental strand, 55437431 - 55437374
Alignment:
Q  47 gttaccatataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    |||| |||||||| |||||| ||||| |||||||||||||||   |||||||||||||||    
T  55437431 gttatcatataagcgattatctataagctatttctataacaa--tataaaataaagtcaa 55437374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0654 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0654
Description:

Target: scaffold0654; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 106
Target Start/End: Complemental strand, 6812 - 6725
Alignment:
Q  20 tgtttggataaacaacttaac-taaacagttaccatataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    ||||||||||||||||||||  ||| || ||| |||||||| | |||||||||||||||||||||||||||  ||||| | |||||||    
T  6812 tgtttggataaacaacttaatataagcacttatcatataagtgcttatgtataaactatttctataacaaaaaataaacttaagtcaa 6725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 106
Target Start/End: Complemental strand, 116731 - 116644
Alignment:
Q  20 tgtttggataaacaacttaac-taaacagttaccatataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    ||||||||||||||||||||  ||| || ||| |||||||| | |||||||||||||||||||||||||||  ||||| | |||||||    
T  116731 tgtttggataaacaacttaatataagcacttatcatataagtgcttatgtataaactatttctataacaaaaaataaacttaagtcaa 116644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 52 - 106
Target Start/End: Complemental strand, 1216 - 1162
Alignment:
Q  52 catataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    |||||||| | |||||||||| |||||||||||||||| ||||||||||||||||    
T  1216 catataagtgcttatgtataagctatttctataacaaaagataaaataaagtcaa 1162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 52 - 106
Target Start/End: Original strand, 2759 - 2813
Alignment:
Q  52 catataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    |||||||| | |||||||||| |||||||||||||||| ||||||||||||||||    
T  2759 catataagtgcttatgtataagctatttctataacaaaagataaaataaagtcaa 2813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 20 - 101
Target Start/End: Original strand, 23807 - 23888
Alignment:
Q  20 tgtttggataaacaacttaactaaacagttaccatataagagattatgtataaactatttctataacaaatgataaaataaa 101  Q
    |||||||||||||||||||| |||||| ||| |||| ||| | |||  ||||| |||||||||||||||| ||| |||||||    
T  23807 tgtttggataaacaacttaattaaacacttatcataaaagcgcttacatataagctatttctataacaaaagatgaaataaa 23888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000004; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 52 - 113
Target Start/End: Original strand, 870973 - 871034
Alignment:
Q  52 catataagagattatgtataaactatttctataacaaatgataaaataaagtcaatgttttt 113  Q
    |||||||| | ||||||||||||||||| ||||||||| |||||||| |||||||| |||||    
T  870973 catataagtgcttatgtataaactatttttataacaaaagataaaattaagtcaattttttt 871034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 158 - 253
Target Start/End: Original strand, 33759630 - 33759724
Alignment:
Q  158 tggacatgtcataagctgtttccacaagttctctcaaacaatatcacaacaagtgtttatgtcagtagataagcttaaataaaccagtccaaacag 253  Q
    ||||||||| ||| |||||||||  ||  |||| |||| ||| |||||| ||||| |||||||||| ||||| || ||||||||||||||||||||    
T  33759630 tggacatgttataggctgtttccgaaatctctcccaaataatctcacaa-aagtgcttatgtcagtcgataaactcaaataaaccagtccaaacag 33759724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 155 - 256
Target Start/End: Original strand, 43420315 - 43420413
Alignment:
Q  155 ttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaacaagtgtttatgtcagtagataagcttaaataaaccagtccaaacaga 254  Q
    ||||| ||||||||||||||||||||| ||| |||| ||| || | ||||||   ||||||||||| ||||||||||| |||||| | | ||| ||||||    
T  43420315 ttatgaacatgtcataagctgtttccataagatctcacaagcagtctcacaa---gtgtttatgtctgtagataagctcaaataagctaatcctaacaga 43420411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 50319231 - 50319274
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    |||||||||| |||||||||||||||| ||||||||||||||||    
T  50319231 ttatgtataagctatttctataacaaaagataaaataaagtcaa 50319274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 106
Target Start/End: Original strand, 23895264 - 23895318
Alignment:
Q  52 catataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    ||||||||  ||||||||||| |||||||||||||||| ||||||||||| ||||    
T  23895264 catataagttattatgtataagctatttctataacaaaagataaaataaattcaa 23895318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 202
Target Start/End: Complemental strand, 28689468 - 28689418
Alignment:
Q  152 aacttatggacatgtcataagctgtttccacaagttctctcaaacaatatc 202  Q
    |||||||||||||||||||||||||||||  ||||||||| ||||| ||||    
T  28689468 aacttatggacatgtcataagctgtttccgtaagttctctaaaacagtatc 28689418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 197
Target Start/End: Original strand, 15579536 - 15579581
Alignment:
Q  152 aacttatggacatgtcataagctgtttccacaagttctctcaaaca 197  Q
    ||||||||||||||||||||| |||||||||||| |||| ||||||    
T  15579536 aacttatggacatgtcataagttgtttccacaagctctcccaaaca 15579581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 106
Target Start/End: Complemental strand, 40358027 - 40357974
Alignment:
Q  53 atataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    ||||||| || ||||||||| |||||||||||||||  ||||||||||||||||    
T  40358027 atataagtgactatgtataagctatttctataacaatggataaaataaagtcaa 40357974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 105
Target Start/End: Complemental strand, 41638484 - 41638399
Alignment:
Q  20 tgtttggataaacaacttaactaaacagttaccatataagagattatgtataaactatttctataacaaatgataaaataaagtca 105  Q
    |||||||||||||||||| | ||| || ||| |||||||| | ||||||||||  ||||| || |||| | |||||||||||||||    
T  41638484 tgtttggataaacaacttgattaagcacttatcatataagtgcttatgtataatttatttatagaacacaagataaaataaagtca 41638399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 63 - 103
Target Start/End: Original strand, 7028231 - 7028271
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagt 103  Q
    |||||||||||||||||||||| |||| |||||||||||||    
T  7028231 ttatgtataaactatttctatagcaaaagataaaataaagt 7028271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 128 - 180
Target Start/End: Complemental strand, 26293192 - 26293140
Alignment:
Q  128 ttgttttcataagctattctggagaacttatggacatgtcataagctgtttcc 180  Q
    ||||||||||||||||| ||||| |  |||||||||| |||||||||||||||    
T  26293192 ttgttttcataagctatcctggaaagtttatggacatctcataagctgtttcc 26293140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 155 - 199
Target Start/End: Complemental strand, 49521818 - 49521774
Alignment:
Q  155 ttatggacatgtcataagctgtttccacaagttctctcaaacaat 199  Q
    ||||| |||||||||||| |||||||||||| |||||||||||||    
T  49521818 ttatgaacatgtcataagttgtttccacaagctctctcaaacaat 49521774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 161
Target Start/End: Complemental strand, 10581151 - 10581108
Alignment:
Q  118 aagctacaagttgttttcataagctattctggagaacttatgga 161  Q
    |||||| ||||||||||||||||||||| ||| |||||||||||    
T  10581151 aagctataagttgttttcataagctattatggggaacttatgga 10581108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 239
Target Start/End: Original strand, 15581310 - 15581392
Alignment:
Q  154 cttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaacaagtgtttatgtcagtagataagcttaaataa 239  Q
    ||||| ||||||||||||| ||||||||  || |||  |||||||| ||||||   ||| ||||||||||||||||||| ||||||    
T  15581310 cttatagacatgtcataagttgtttccattagctcttccaaacaatctcacaa---gtgcttatgtcagtagataagctaaaataa 15581392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 26184690 - 26184733
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    ||||||||||||||||||||||| ||| | ||||||||||||||    
T  26184690 ttatgtataaactatttctataagaaaaggtaaaataaagtcaa 26184733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 206
Target Start/End: Original strand, 29723546 - 29723597
Alignment:
Q  155 ttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaa 206  Q
    |||||||||||||||||||||||||||  |||||| ||||||  ||||||||    
T  29723546 ttatggacatgtcataagctgtttccattagttctttcaaactgtatcacaa 29723597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 106
Target Start/End: Complemental strand, 36151636 - 36151593
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    |||||||||| ||||||| |||||||| ||||||||||||||||    
T  36151636 ttatgtataagctatttcaataacaaaagataaaataaagtcaa 36151593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 206
Target Start/End: Original strand, 37811909 - 37811960
Alignment:
Q  155 ttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaa 206  Q
    ||||| |||||||||||||||||| || |||||||||||| || ||||||||    
T  37811909 ttatgaacatgtcataagctgttttcataagttctctcaaccagtatcacaa 37811960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 129 - 191
Target Start/End: Complemental strand, 2035470 - 2035408
Alignment:
Q  129 tgttttcataagctattctggagaacttatggacatgtcataagctgtttccacaagttctct 191  Q
    |||||||||||||||| | || || |||||||| |||||||||||| ||| || |||||||||    
T  2035470 tgttttcataagctatccaggtgagcttatggatatgtcataagctattttcataagttctct 2035408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 67 - 105
Target Start/End: Complemental strand, 4276763 - 4276725
Alignment:
Q  67 gtataaactatttctataacaaatgataaaataaagtca 105  Q
    ||||||||||||||||||||||| ||||| |||||||||    
T  4276763 gtataaactatttctataacaaaagataatataaagtca 4276725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 52 - 98
Target Start/End: Original strand, 6659631 - 6659677
Alignment:
Q  52 catataagagattatgtataaactatttctataacaaatgataaaat 98  Q
    |||||||| | |||||||||||||||||||||| |||| ||||||||    
T  6659631 catataagtgcttatgtataaactatttctatagcaaaagataaaat 6659677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 68 - 159
Target Start/End: Complemental strand, 7218200 - 7218107
Alignment:
Q  68 tataaactatttctataacaaatgataaaataaagtcaa--tgtttttcaggaagctacaagttgttttcataagctattctggagaacttatg 159  Q
    ||||| ||||||| |||| ||| | ||||||||||||||  ||||||     |||||| ||||||||||||||| |||| ||||||||||||||    
T  7218200 tataatctatttccataataaaaggtaaaataaagtcaaattgttttcatataagctataagttgttttcataacctatcctggagaacttatg 7218107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 73 - 103
Target Start/End: Original strand, 14332561 - 14332591
Alignment:
Q  73 actatttctataacaaatgataaaataaagt 103  Q
    |||||||||||||||||||||||||||||||    
T  14332561 actatttctataacaaatgataaaataaagt 14332591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 52 - 106
Target Start/End: Original strand, 36602718 - 36602772
Alignment:
Q  52 catataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    |||||||| |||||||||||| |||| |||| |||||  ||||||||||||||||    
T  36602718 catataagtgattatgtataagctatatctacaacaatagataaaataaagtcaa 36602772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 56 - 106
Target Start/End: Complemental strand, 37176008 - 37175958
Alignment:
Q  56 taagagattatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    |||| |||||| ||||||||||||||||||| || | ||||||||||||||    
T  37176008 taagtgattatatataaactatttctataaccaaaggtaaaataaagtcaa 37175958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 63 - 101
Target Start/End: Original strand, 37591371 - 37591409
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaa 101  Q
    ||||||||||||||||||||||| ||| |||||||||||    
T  37591371 ttatgtataaactatttctataataaaagataaaataaa 37591409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 65 - 103
Target Start/End: Original strand, 37841939 - 37841977
Alignment:
Q  65 atgtataaactatttctataacaaatgataaaataaagt 103  Q
    |||||||| ||||| ||||||||||||||||||||||||    
T  37841939 atgtataagctattcctataacaaatgataaaataaagt 37841977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 52 - 106
Target Start/End: Complemental strand, 46499996 - 46499942
Alignment:
Q  52 catataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    |||||||| | |||| ||||| |||||||||||| ||| ||||||||||||||||    
T  46499996 catataagtgcttatctataagctatttctataagaaaagataaaataaagtcaa 46499942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 156 - 206
Target Start/End: Complemental strand, 49692064 - 49692014
Alignment:
Q  156 tatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaa 206  Q
    ||||||||||||||||||| ||| || ||||||||||||||| | ||||||    
T  49692064 tatggacatgtcataagctattttcataagttctctcaaacagtctcacaa 49692014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 106
Target Start/End: Complemental strand, 4202302 - 4202217
Alignment:
Q  21 gtttggataaacaacttaactaaacagttaccatataagagattatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    |||||||||| |||||||| ||| |  ||| |||||||| | ||| ||||||  ||||||||||||||| ||||||  ||||||||    
T  4202302 gtttggataagcaacttaattaagcgtttatcatataagtgcttaagtataagttatttctataacaaaagataaaccaaagtcaa 4202217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 261
Target Start/End: Original strand, 6292549 - 6292652
Alignment:
Q  154 cttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaacaagtgtttatgtcagtagataagcttaaataaaccagtccaaacag 253  Q
    |||||| ||||||||||||||||||  | || ||||| |||||||| ||   | ||||| ||||||||||||||||||| ||||||  || ||||||||     
T  6292549 cttatgaacatgtcataagctgttt-taaaaattctcccaaacaatctc---aaaagtgcttatgtcagtagataagctcaaataagtcaatccaaacaa 6292644  T
Q  254 accttaag 261  Q
    ||| ||||    
T  6292645 accataag 6292652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 195
Target Start/End: Original strand, 16980823 - 16980900
Alignment:
Q  118 aagctacaagttgttttcataagctattctggagaacttatggacatgtcataagctgtttccacaagttctctcaaa 195  Q
    |||||| ||| ||||||||| |||||||||||| |  ||||| | ||||| |||| |||||||| ||| |||||||||    
T  16980823 aagctataagctgttttcattagctattctggaaagtttatgaaaatgtcgtaagttgtttccataagctctctcaaa 16980900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 104
Target Start/End: Original strand, 17420142 - 17420183
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagtc 104  Q
    ||||||||||||||||| ||||| ||| ||||||||||||||    
T  17420142 ttatgtataaactatttttataagaaaagataaaataaagtc 17420183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 26179382 - 26179451
Alignment:
Q  13 taagctatgtttggataaacaacttaactaaacagttaccatataagagattatgtataaactatttcta 82  Q
    |||| ||||||||||||| ||| ||||||| ||  |||  ||||||| | ||||||||||||||||||||    
T  26179382 taaggtatgtttggataaccaaattaactacacgcttataatataagtgcttatgtataaactatttcta 26179451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 181
Target Start/End: Original strand, 27145975 - 27146004
Alignment:
Q  152 aacttatggacatgtcataagctgtttcca 181  Q
    ||||||||||||||||||||||||||||||    
T  27145975 aacttatggacatgtcataagctgtttcca 27146004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 239
Target Start/End: Complemental strand, 29793663 - 29793630
Alignment:
Q  206 acaagtgtttatgtcagtagataagcttaaataa 239  Q
    ||||||||||||||||||||||||||| ||||||    
T  29793663 acaagtgtttatgtcagtagataagctcaaataa 29793630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 103
Target Start/End: Complemental strand, 33339588 - 33339511
Alignment:
Q  26 gataaacaacttaactaaacagttaccatataagagattatgtataaactatttctataacaaatgataaaataaagt 103  Q
    |||||||||||||| |||   |||| |||||| | | |||||||||| ||||||||||| |||| |||||||| ||||    
T  33339588 gataaacaacttaattaagtggttatcatataggtgtttatgtataagctatttctataccaaaagataaaatgaagt 33339511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 106
Target Start/End: Complemental strand, 45999417 - 45999376
Alignment:
Q  65 atgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    |||||||| |||||||||||||||| ||||| ||||||||||    
T  45999417 atgtataagctatttctataacaaaagataagataaagtcaa 45999376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 63 - 103
Target Start/End: Complemental strand, 172708 - 172668
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagt 103  Q
    |||||||||| |||||||||||||||| ||||| |||||||    
T  172708 ttatgtataagctatttctataacaaaagataacataaagt 172668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 64 - 100
Target Start/End: Complemental strand, 1725241 - 1725205
Alignment:
Q  64 tatgtataaactatttctataacaaatgataaaataa 100  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  1725241 tatgtataaactatttctataataaaagataaaataa 1725205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 63 - 103
Target Start/End: Original strand, 4549805 - 4549845
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagt 103  Q
    ||||||| || |||||||||||||||| |||||||||||||    
T  4549805 ttatgtacaagctatttctataacaaaagataaaataaagt 4549845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 63 - 103
Target Start/End: Complemental strand, 4700197 - 4700157
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagt 103  Q
    ||||||| || |||||||||||||||| |||||||||||||    
T  4700197 ttatgtacaagctatttctataacaaaagataaaataaagt 4700157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 52 - 96
Target Start/End: Original strand, 13037792 - 13037836
Alignment:
Q  52 catataagagattatgtataaactatttctataacaaatgataaa 96  Q
    |||||||| | |||||||||| |||||||||||||||| ||||||    
T  13037792 catataagtgcttatgtataagctatttctataacaaaagataaa 13037836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 118 - 158
Target Start/End: Complemental strand, 25005871 - 25005831
Alignment:
Q  118 aagctacaagttgttttcataagctattctggagaacttat 158  Q
    |||||| |||||||||||||||||||| ||||||| |||||    
T  25005871 aagctataagttgttttcataagctatcctggagagcttat 25005831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 152 - 180
Target Start/End: Original strand, 27140532 - 27140560
Alignment:
Q  152 aacttatggacatgtcataagctgtttcc 180  Q
    |||||||||||||||||||||||||||||    
T  27140532 aacttatggacatgtcataagctgtttcc 27140560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 32515457 - 32515374
Alignment:
Q  152 aacttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaacaagtgtttatgtcagtagataagcttaaata 238  Q
    ||||||| ||||||||||| |||||||||| ||| |||| |||||| | ||   ||||||| |||||| ||||||||| || |||||    
T  32515457 aacttattgacatgtcatacgctgtttccataagctctcccaaacagtctc---acaagtgcttatgttagtagataaactcaaata 32515374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 39777605 - 39777645
Alignment:
Q  66 tgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    |||||| ||||||||||||||||| |||| |||||||||||    
T  39777605 tgtatatactatttctataacaaaagatagaataaagtcaa 39777645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 62 - 106
Target Start/End: Original strand, 43420019 - 43420063
Alignment:
Q  62 attatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    ||||||||||| ||||||| ||||| || ||||||||||||||||    
T  43420019 attatgtataagctatttccataacgaaagataaaataaagtcaa 43420063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 117 - 161
Target Start/End: Complemental strand, 49282949 - 49282905
Alignment:
Q  117 gaagctacaagttgttttcataagctattctggagaacttatgga 161  Q
    |||||||||||||||||||||||||| |||| ||||  |||||||    
T  49282949 gaagctacaagttgttttcataagctgttcttgagagattatgga 49282905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 66 - 106
Target Start/End: Original strand, 49517012 - 49517052
Alignment:
Q  66 tgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    |||||||  ||||||||||||||| ||||||||||||||||    
T  49517012 tgtataagttatttctataacaaaagataaaataaagtcaa 49517052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 127 - 195
Target Start/End: Complemental strand, 9840 - 9772
Alignment:
Q  127 gttgttttcataagctattctggagaacttatggacatgtcataagctgtttccacaagttctctcaaa 195  Q
    ||||||||||||| |||| | ||| |||||||||||||||||||| |||||| || ||  |||||||||    
T  9840 gttgttttcataatctatcccggacaacttatggacatgtcataaactgttttcataaactctctcaaa 9772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 104
Target Start/End: Original strand, 5936 - 5999
Alignment:
Q  41 taaacagttaccatataagagattatgtataaactatttctataacaaatgataaaataaagtc 104  Q
    |||||| ||| |||||||| | |||||||||||| ||||| |||||||| |||||||| |||||    
T  5936 taaacatttatcatataagtgtttatgtataaacaatttcaataacaaaagataaaatcaagtc 5999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 20118 - 20161
Alignment:
Q  63 ttatgtataaactatttctataacaaatgataaaataaagtcaa 106  Q
    ||||||||| |||||||||||||| || ||||||||||||||||    
T  20118 ttatgtatatactatttctataaccaaagataaaataaagtcaa 20161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 132 - 174
Target Start/End: Complemental strand, 35855 - 35813
Alignment:
Q  132 tttcataagctattctggagaacttatggacatgtcataagct 174  Q
    |||||||| |||| ||||||| |||||||||||||||||||||    
T  35855 tttcataaactatcctggagagcttatggacatgtcataagct 35813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 253
Target Start/End: Complemental strand, 159987 - 159891
Alignment:
Q  154 cttatggacatgtcataagctgtttccacaagttctctcaaacaatatcacaacaagtgtttatgtcagtagataagcttaaataaaccagtccaaacag 253  Q
    ||||| |||||||||||| |||||||||  |||||||  ||| | | ||   |||||||||||| | |||||||||||| |||||| ||| |||||||||    
T  159987 cttatagacatgtcataaactgtttccattagttctccaaaatagtttc---acaagtgtttatattagtagataagctcaaataagccaatccaaacag 159891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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