View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19367_high_2 (Length: 529)

Name: NF19367_high_2
Description: NF19367
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19367_high_2
NF19367_high_2
[»] chr8 (51 HSPs)
chr8 (77-529)||(34878916-34879369)
chr8 (1-84)||(54665-54748)
chr8 (1-81)||(2890215-2890295)
chr8 (1-80)||(7785831-7785910)
chr8 (1-80)||(7805752-7805831)
chr8 (1-84)||(43199407-43199490)
chr8 (1-78)||(3304331-3304408)
chr8 (1-78)||(6552655-6552732)
chr8 (1-78)||(12343193-12343270)
chr8 (1-78)||(32114528-32114605)
chr8 (1-78)||(44498240-44498317)
chr8 (1-79)||(12763707-12763785)
chr8 (1-79)||(25601053-25601131)
chr8 (1-79)||(32211416-32211494)
chr8 (1-78)||(15888405-15888482)
chr8 (1-78)||(31654613-31654690)
chr8 (1-78)||(39571256-39571333)
chr8 (1-81)||(33289314-33289394)
chr8 (1-78)||(7012171-7012248)
chr8 (16-80)||(4245649-4245713)
chr8 (1-79)||(13578856-13578934)
chr8 (1-84)||(8587164-8587247)
chr8 (1-75)||(28463614-28463688)
chr8 (24-84)||(27422266-27422326)
chr8 (24-79)||(25600999-25601054)
chr8 (32-81)||(7785775-7785824)
chr8 (45-85)||(6899412-6899452)
chr8 (32-80)||(39571201-39571249)
chr8 (32-79)||(54611-54658)
chr8 (32-79)||(2890161-2890208)
chr8 (32-79)||(43199353-43199400)
chr8 (32-78)||(6552739-6552785)
chr8 (21-71)||(13246801-13246851)
chr8 (7-73)||(17006916-17006982)
chr8 (7-73)||(17570265-17570331)
chr8 (10-80)||(24692040-24692110)
chr8 (34-80)||(32211361-32211407)
chr8 (32-78)||(33289261-33289307)
chr8 (32-82)||(44498183-44498233)
chr8 (32-81)||(7805696-7805745)
chr8 (88-141)||(26925761-26925814)
chr8 (32-80)||(7012255-7012303)
chr8 (32-72)||(12343146-12343186)
chr8 (32-80)||(12763652-12763700)
chr8 (34-86)||(33057586-33057638)
chr8 (32-78)||(3304278-3304324)
chr8 (32-78)||(31654697-31654743)
chr8 (34-80)||(32114473-32114519)
chr8 (21-66)||(24203046-24203091)
chr8 (53-82)||(35011207-35011236)
chr8 (32-80)||(15888350-15888398)
[»] chr4 (55 HSPs)
chr4 (1-85)||(47833604-47833688)
chr4 (1-82)||(48336259-48336340)
chr4 (1-81)||(3372118-3372198)
chr4 (1-78)||(20538739-20538816)
chr4 (1-78)||(24704370-24704447)
chr4 (1-78)||(53337370-53337447)
chr4 (1-81)||(3992973-3993053)
chr4 (1-81)||(42797729-42797809)
chr4 (1-79)||(26231576-26231654)
chr4 (1-79)||(33551200-33551278)
chr4 (1-78)||(6121946-6122023)
chr4 (1-78)||(46797725-46797802)
chr4 (4-79)||(3904739-3904814)
chr4 (1-80)||(43900547-43900626)
chr4 (1-79)||(7579309-7579387)
chr4 (1-79)||(47838670-47838748)
chr4 (1-82)||(51894635-51894716)
chr4 (1-78)||(52756675-52756752)
chr4 (1-79)||(33621795-33621873)
chr4 (5-79)||(40913246-40913320)
chr4 (1-80)||(41469819-41469898)
chr4 (4-78)||(5986876-5986950)
chr4 (1-66)||(3422073-3422137)
chr4 (4-66)||(41615732-41615794)
chr4 (6-79)||(25855082-25855155)
chr4 (4-67)||(29845656-29845719)
chr4 (24-78)||(4780371-4780425)
chr4 (32-85)||(47838610-47838663)
chr4 (32-83)||(3422144-3422195)
chr4 (6-72)||(17236845-17236912)
chr4 (32-78)||(42797816-42797862)
chr4 (32-81)||(41469763-41469812)
chr4 (32-84)||(48336347-48336399)
chr4 (32-84)||(51894576-51894628)
chr4 (22-81)||(5986950-5987009)
chr4 (24-79)||(24704446-24704501)
chr4 (32-78)||(6121893-6121939)
chr4 (32-78)||(46797809-46797855)
chr4 (32-78)||(47833695-47833741)
chr4 (1-63)||(50430471-50430533)
chr4 (34-79)||(3904682-3904727)
chr4 (7-72)||(17344219-17344284)
chr4 (32-81)||(33621880-33621929)
chr4 (32-73)||(40913194-40913235)
chr4 (34-78)||(20538686-20538730)
chr4 (32-79)||(3993060-3993107)
chr4 (32-79)||(53337454-53337501)
chr4 (32-78)||(3372205-3372251)
chr4 (32-78)||(7579394-7579440)
chr4 (32-78)||(43900633-43900679)
chr4 (32-78)||(44900080-44900126)
chr4 (10-67)||(6924746-6924802)
chr4 (22-71)||(41615683-41615732)
chr4 (46-83)||(48361046-48361083)
chr4 (24-64)||(32822285-32822325)
[»] chr5 (40 HSPs)
chr5 (1-84)||(37149008-37149091)
chr5 (1-85)||(582982-583066)
chr5 (1-85)||(9395343-9395427)
chr5 (1-81)||(20848071-20848151)
chr5 (1-80)||(36563591-36563670)
chr5 (1-79)||(23359941-23360019)
chr5 (1-79)||(41989460-41989538)
chr5 (1-78)||(11795168-11795245)
chr5 (1-79)||(13033050-13033128)
chr5 (1-79)||(13103023-13103101)
chr5 (1-78)||(26350403-26350480)
chr5 (1-84)||(37641947-37642031)
chr5 (1-80)||(17025622-17025701)
chr5 (1-80)||(4443958-4444037)
chr5 (1-79)||(38361744-38361822)
chr5 (1-54)||(21575970-21576023)
chr5 (1-57)||(6126845-6126901)
chr5 (1-71)||(13539920-13539986)
chr5 (32-84)||(9395434-9395486)
chr5 (32-84)||(13103108-13103160)
chr5 (32-78)||(23360026-23360072)
chr5 (32-84)||(13033135-13033187)
chr5 (32-84)||(36563532-36563584)
chr5 (32-80)||(41989405-41989453)
chr5 (32-79)||(17025708-17025755)
chr5 (32-78)||(6126908-6126954)
chr5 (34-72)||(11574166-11574204)
chr5 (24-73)||(966224-966273)
chr5 (24-79)||(2629620-2629675)
chr5 (32-79)||(11795252-11795299)
chr5 (32-79)||(21576030-21576077)
chr5 (32-79)||(37642038-37642085)
chr5 (32-78)||(37148955-37149001)
chr5 (23-72)||(3549553-3549602)
chr5 (32-73)||(4444044-4444085)
chr5 (22-71)||(27081014-27081063)
chr5 (1-78)||(39290775-39290851)
chr5 (20-64)||(2366352-2366396)
chr5 (46-82)||(36417042-36417078)
chr5 (34-70)||(36595782-36595818)
[»] chr3 (57 HSPs)
chr3 (1-84)||(4238588-4238671)
chr3 (1-82)||(22721927-22722008)
chr3 (1-85)||(38964385-38964469)
chr3 (1-84)||(2787885-2787968)
chr3 (1-80)||(44785449-44785528)
chr3 (1-79)||(19557105-19557183)
chr3 (1-79)||(49823434-49823512)
chr3 (1-78)||(10297979-10298056)
chr3 (1-81)||(8437422-8437502)
chr3 (1-85)||(8817439-8817523)
chr3 (1-81)||(21295379-21295459)
chr3 (1-81)||(34080083-34080163)
chr3 (1-78)||(17653712-17653789)
chr3 (1-78)||(37508921-37508998)
chr3 (1-78)||(48340397-48340474)
chr3 (1-78)||(51406673-51406750)
chr3 (1-81)||(40691049-40691129)
chr3 (1-81)||(42507408-42507488)
chr3 (1-80)||(9111547-9111626)
chr3 (1-79)||(36095733-36095811)
chr3 (1-79)||(46208029-46208107)
chr3 (1-78)||(35513473-35513550)
chr3 (1-81)||(42170399-42170479)
chr3 (1-73)||(6013389-6013461)
chr3 (1-71)||(33942985-33943055)
chr3 (32-80)||(17653796-17653844)
chr3 (32-79)||(4238678-4238725)
chr3 (32-79)||(37509005-37509052)
chr3 (32-79)||(46208114-46208161)
chr3 (32-78)||(21295326-21295372)
chr3 (32-85)||(6013329-6013382)
chr3 (23-72)||(33128212-33128261)
chr3 (32-80)||(10298063-10298111)
chr3 (32-80)||(40690994-40691042)
chr3 (32-83)||(8817381-8817432)
chr3 (32-79)||(49823380-49823427)
chr3 (20-78)||(9213588-9213646)
chr3 (32-78)||(19557052-19557098)
chr3 (32-78)||(34080030-34080076)
chr3 (32-78)||(38964476-38964522)
chr3 (32-78)||(48340481-48340527)
chr3 (32-73)||(9111499-9111540)
chr3 (32-73)||(42507360-42507401)
chr3 (34-79)||(51406759-51406804)
chr3 (32-80)||(9027140-9027188)
chr3 (6-66)||(43323072-43323132)
chr3 (32-79)||(8437509-8437556)
chr3 (6-61)||(8951954-8952009)
chr3 (17-80)||(9213514-9213577)
chr3 (32-71)||(22722015-22722054)
chr3 (25-68)||(26001141-26001184)
chr3 (28-63)||(29285838-29285873)
chr3 (32-78)||(2787832-2787878)
chr3 (32-78)||(44785396-44785442)
chr3 (24-81)||(45652066-45652123)
chr3 (10-78)||(2131734-2131802)
chr3 (32-68)||(42170356-42170392)
[»] chr7 (42 HSPs)
chr7 (1-83)||(1738500-1738582)
chr7 (1-82)||(7240745-7240826)
chr7 (1-80)||(1565782-1565861)
chr7 (1-80)||(46840858-46840937)
chr7 (1-79)||(38063966-38064044)
chr7 (1-82)||(9268752-9268833)
chr7 (1-78)||(23314192-23314269)
chr7 (1-78)||(31319452-31319529)
chr7 (1-85)||(7482218-7482302)
chr7 (1-79)||(28536804-28536882)
chr7 (1-82)||(22285695-22285776)
chr7 (1-78)||(36583395-36583472)
chr7 (1-78)||(94371-94448)
chr7 (1-78)||(36016249-36016326)
chr7 (1-78)||(38441460-38441537)
chr7 (1-79)||(4790247-4790325)
chr7 (1-62)||(33418392-33418453)
chr7 (1-80)||(9575407-9575486)
chr7 (4-72)||(40840175-40840243)
chr7 (32-90)||(7482309-7482367)
chr7 (32-85)||(7240833-7240886)
chr7 (86-137)||(260175-260226)
chr7 (32-81)||(1738444-1738493)
chr7 (32-79)||(9268840-9268887)
chr7 (32-78)||(22285783-22285829)
chr7 (32-78)||(23314139-23314185)
chr7 (32-78)||(38441544-38441590)
chr7 (32-78)||(46840944-46840990)
chr7 (32-81)||(36583479-36583528)
chr7 (32-81)||(38063910-38063959)
chr7 (32-72)||(33418460-33418500)
chr7 (32-79)||(4790332-4790379)
chr7 (32-71)||(40840126-40840165)
chr7 (24-71)||(46877666-46877713)
chr7 (32-78)||(94318-94364)
chr7 (46-84)||(3411449-3411487)
chr7 (32-78)||(31319399-31319445)
chr7 (77-135)||(39226137-39226195)
chr7 (1-78)||(7269458-7269535)
chr7 (34-78)||(9575495-9575539)
chr7 (32-84)||(28536745-28536797)
chr7 (32-68)||(36016206-36016242)
[»] scaffold0204 (2 HSPs)
scaffold0204 (1-82)||(23781-23862)
scaffold0204 (32-84)||(23869-23921)
[»] chr1 (53 HSPs)
chr1 (1-82)||(27159411-27159492)
chr1 (1-82)||(44668146-44668227)
chr1 (1-81)||(26471118-26471198)
chr1 (1-79)||(9981646-9981724)
chr1 (1-78)||(31842848-31842925)
chr1 (1-78)||(39402019-39402096)
chr1 (1-78)||(47216752-47216829)
chr1 (1-80)||(11795931-11796010)
chr1 (1-80)||(14984835-14984914)
chr1 (1-79)||(34042695-34042773)
chr1 (1-78)||(1050888-1050965)
chr1 (1-78)||(23278054-23278131)
chr1 (1-78)||(44955259-44955336)
chr1 (4-81)||(12483684-12483761)
chr1 (1-78)||(47777534-47777611)
chr1 (1-81)||(47588390-47588470)
chr1 (1-82)||(25694315-25694396)
chr1 (1-72)||(47969700-47969772)
chr1 (1-79)||(17556751-17556830)
chr1 (6-84)||(11897048-11897126)
chr1 (1-79)||(16448161-16448239)
chr1 (77-141)||(43182286-43182350)
chr1 (32-80)||(11897138-11897186)
chr1 (4-79)||(12213530-12213605)
chr1 (22-81)||(12483625-12483684)
chr1 (24-79)||(37552217-37552272)
chr1 (32-85)||(9981731-9981784)
chr1 (32-81)||(14984921-14984970)
chr1 (1-78)||(37552141-37552218)
chr1 (77-141)||(38503734-38503798)
chr1 (32-72)||(44955212-44955252)
chr1 (32-79)||(17556837-17556884)
chr1 (32-79)||(25694403-25694450)
chr1 (32-78)||(11796017-11796063)
chr1 (32-78)||(27159358-27159404)
chr1 (32-78)||(31842795-31842841)
chr1 (32-78)||(39401966-39402012)
chr1 (32-78)||(44668093-44668139)
chr1 (32-78)||(47777481-47777527)
chr1 (20-85)||(5392218-5392283)
chr1 (6-63)||(11989796-11989853)
chr1 (32-80)||(1050972-1051020)
chr1 (32-80)||(34042780-34042828)
chr1 (32-79)||(47216698-47216745)
chr1 (51-85)||(14281582-14281616)
chr1 (51-85)||(23398072-23398106)
chr1 (32-78)||(26471065-26471111)
chr1 (45-79)||(47678371-47678405)
chr1 (51-80)||(9302041-9302070)
chr1 (42-79)||(39720779-39720816)
chr1 (32-85)||(47969779-47969832)
chr1 (24-68)||(12062635-12062679)
chr1 (22-78)||(19391948-19392004)
[»] chr6 (38 HSPs)
chr6 (1-81)||(8383022-8383102)
chr6 (1-85)||(13853646-13853730)
chr6 (1-80)||(33052847-33052926)
chr6 (1-79)||(2830334-2830412)
chr6 (1-79)||(11572198-11572276)
chr6 (1-78)||(6330115-6330192)
chr6 (1-78)||(26602323-26602400)
chr6 (1-79)||(8099529-8099607)
chr6 (1-79)||(35031054-35031132)
chr6 (1-85)||(9644689-9644773)
chr6 (1-85)||(9650706-9650790)
chr6 (1-79)||(6143553-6143631)
chr6 (1-82)||(6068562-6068643)
chr6 (1-83)||(8417846-8417928)
chr6 (1-78)||(13043758-13043835)
chr6 (1-62)||(28747187-28747248)
chr6 (5-70)||(6068997-6069062)
chr6 (1-48)||(17992018-17992065)
chr6 (22-79)||(3788111-3788168)
chr6 (32-85)||(8099614-8099667)
chr6 (1-78)||(22896471-22896539)
chr6 (32-81)||(26602407-26602456)
chr6 (32-80)||(9644780-9644828)
chr6 (32-80)||(9650797-9650845)
chr6 (32-79)||(6330199-6330246)
chr6 (32-79)||(11572144-11572191)
chr6 (32-79)||(13853592-13853639)
chr6 (32-78)||(2830419-2830465)
chr6 (21-59)||(6549902-6549940)
chr6 (32-78)||(8382969-8383015)
chr6 (34-79)||(35031000-35031045)
chr6 (1-73)||(14936510-14936582)
chr6 (32-79)||(6068650-6068697)
chr6 (32-78)||(8417793-8417839)
chr6 (80-109)||(1243841-1243870)
chr6 (34-67)||(12473651-12473684)
chr6 (34-78)||(17992074-17992118)
chr6 (32-80)||(33052792-33052840)
[»] chr2 (52 HSPs)
chr2 (1-85)||(41478692-41478776)
chr2 (1-84)||(15896836-15896919)
chr2 (1-80)||(37990066-37990145)
chr2 (1-79)||(3055557-3055635)
chr2 (1-79)||(4683985-4684063)
chr2 (1-79)||(44397546-44397624)
chr2 (1-79)||(44398685-44398763)
chr2 (1-78)||(13197763-13197840)
chr2 (1-78)||(16044370-16044447)
chr2 (1-78)||(37666663-37666740)
chr2 (1-80)||(13344482-13344561)
chr2 (1-84)||(15372220-15372303)
chr2 (1-79)||(16243836-16243914)
chr2 (1-79)||(38917575-38917653)
chr2 (1-78)||(6648572-6648649)
chr2 (1-79)||(9047808-9047886)
chr2 (1-78)||(12337990-12338067)
chr2 (1-76)||(30099235-30099310)
chr2 (1-67)||(41492949-41493015)
chr2 (4-78)||(12170455-12170529)
chr2 (1-72)||(31150659-31150730)
chr2 (32-86)||(6648511-6648565)
chr2 (32-81)||(41492893-41492942)
chr2 (1-50)||(44804631-44804680)
chr2 (32-81)||(9047752-9047801)
chr2 (32-85)||(13197703-13197756)
chr2 (20-85)||(23227344-23227409)
chr2 (32-81)||(41478636-41478685)
chr2 (32-80)||(3055642-3055690)
chr2 (32-84)||(16243777-16243829)
chr2 (32-80)||(37990011-37990059)
chr2 (81-141)||(8912395-8912457)
chr2 (32-79)||(38917521-38917568)
chr2 (32-79)||(44398770-44398817)
chr2 (32-78)||(12337937-12337983)
chr2 (20-78)||(13724102-13724160)
chr2 (32-78)||(15372310-15372356)
chr2 (32-78)||(15896926-15896972)
chr2 (6-59)||(16734802-16734855)
chr2 (32-81)||(37666607-37666656)
chr2 (6-47)||(41453090-41453131)
chr2 (7-63)||(4553069-4553125)
chr2 (22-85)||(12170392-12170455)
chr2 (32-79)||(13344568-13344615)
chr2 (32-79)||(30099181-30099228)
chr2 (32-79)||(44397631-44397678)
chr2 (32-78)||(16044317-16044363)
chr2 (13-79)||(30852682-30852748)
chr2 (24-81)||(10069283-10069340)
chr2 (49-82)||(13775831-13775864)
chr2 (32-73)||(44804583-44804624)
chr2 (32-64)||(36089457-36089489)
[»] scaffold0482 (2 HSPs)
scaffold0482 (1-80)||(12858-12937)
scaffold0482 (32-81)||(12944-12993)
[»] scaffold0009 (2 HSPs)
scaffold0009 (4-80)||(49503-49579)
scaffold0009 (22-78)||(49579-49635)
[»] scaffold1707 (1 HSPs)
scaffold1707 (1-79)||(1334-1412)
[»] scaffold0464 (2 HSPs)
scaffold0464 (1-78)||(6184-6261)
scaffold0464 (32-85)||(6124-6177)
[»] scaffold0415 (1 HSPs)
scaffold0415 (4-67)||(13782-13845)
[»] scaffold0011 (2 HSPs)
scaffold0011 (3-78)||(231358-231433)
scaffold0011 (32-80)||(231301-231349)
[»] scaffold0650 (1 HSPs)
scaffold0650 (6-79)||(43-115)
[»] scaffold0171 (1 HSPs)
scaffold0171 (32-73)||(12437-12478)


Alignment Details
Target: chr8 (Bit Score: 438; Significance: 0; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 438; E-Value: 0
Query Start/End: Original strand, 77 - 529
Target Start/End: Original strand, 34878916 - 34879369
Alignment:
Q  77 tattattttcatttcacttttctatatttttctatcaactatgaattctatcaagaattgtaatagttgtggacggcctaaaacatttgaaactgtcata 176  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  34878916 tattattttcatttcacttttctatatttttctatcaactatgaattctatcaagaattgtaatagttgtggacggcctaaaacatttgaaattgtcata 34879015  T
Q  177 ttacagaatgtatatgatgatgtataagaatgttggaggcctcagtttatttgttatataacaccttctccaccactagtggttcccaccaactttattc 276  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34879016 ttacagaatgtatatgatgatgtataagaatgttggaggcctcagtttatttgttatataacaccttctccaccactagtggttcccaccaactttattc 34879115  T
Q  277 caaccgtttt-ttgttaccatttcatatctaggcccacattcacattcgtgctactgatctctaatctttaattgctctattccatacaatattgcatta 375  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  34879116 caaccgtttttttgttaccatttcatatctaggcccacattcacattcgtgctactgttctctaatctttaattgctctattccatacaatattgcatta 34879215  T
Q  376 ccaagggatataggaagcaaaaactgtcctctaaatttgacatgtctgctgctgtaggagctgtgtctacaaccaaagatgtttccttcaatgctcattt 475  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34879216 ccaagggatataggaagcaaaaactgtcctctaaatttgacatgtctgctgctgtaggagctgtgtctacaaccaaagatgtttccttcaatgctcattt 34879315  T
Q  476 ggaggaagagcacaaaaacaaaggaaccaacaaggttggtgtcaactatgatga 529  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34879316 ggaggaagagcacaaaaacaaaggaaccaacaaggttggtgtcaactatgatga 34879369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 54665 - 54748
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattattt 84  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54665 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattattt 54748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 2890215 - 2890295
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatta 81  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2890215 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatta 2890295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 7785831 - 7785910
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7785831 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 7785910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 7805752 - 7805831
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7805752 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 7805831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 43199407 - 43199490
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattattt 84  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  43199407 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtataattt 43199490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 3304331 - 3304408
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3304331 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 3304408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 6552732 - 6552655
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6552732 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 6552655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 12343193 - 12343270
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12343193 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 12343270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 32114528 - 32114605
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32114528 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 32114605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 44498240 - 44498317
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44498240 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 44498317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 12763707 - 12763785
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  12763707 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtat 12763785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 25601053 - 25601131
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  25601053 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggatcggaggtagtat 25601131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 32211416 - 32211494
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  32211416 atctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagtat 32211494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 15888405 - 15888482
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15888405 atctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 15888482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 31654690 - 31654613
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  31654690 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 31654613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 39571256 - 39571333
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  39571256 atctagttaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaataggaccggaggtagta 39571333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 33289314 - 33289394
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatta 81  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  33289314 atctagttaaaaattcagtccaaatacattcacttatgttgatctaaatttctcttataaataggaccggaggtagtatta 33289394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 7012248 - 7012171
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  7012248 atctagttaaaaattcagtccaaatatattcacttttgttgatctaaatttctcttataaataggaccggaggtagta 7012171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 4245649 - 4245713
Alignment:
Q  16 cagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4245649 cagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 4245713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 13578934 - 13578856
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||    
T  13578934 atctagttaaaaattcagttcaaatacattcacttttattgacctaaatttctcttataaatagaactggaggtagtat 13578856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 8587247 - 8587164
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattattt 84  Q
    ||||||||||||||| |||| ||||||||  ||||||||||||| || ||||||||||||||||||||||||| |||| |||||    
T  8587247 atctagttaaaaatttagtcaaaatacatcaacttttgttgaccaaactttctcttataaataggaccggagggagtactattt 8587164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 28463688 - 28463614
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggta 75  Q
    |||| ||| ||||||||||||||||||||  ||||||||||||| || |||||||||||||||||||||||||||    
T  28463688 atctggttcaaaattcagtccaaatacatcaacttttgttgacccaactttctcttataaataggaccggaggta 28463614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 24 - 84
Target Start/End: Original strand, 27422266 - 27422326
Alignment:
Q  24 atacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattattt 84  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||| ||| ||||||||||    
T  27422266 atacattcatttttgttgacccaaatttctcttataaataggaccgaagggagtattattt 27422326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 25601054 - 25600999
Alignment:
Q  24 atacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||| ||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  25601054 atacattaacttttgttgacccaaaattctcttataaataggaccggagggagtat 25600999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 7785824 - 7785775
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtatta 81  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  7785824 acttttgttgacccaaaattctcttataaataggaccggagggagtatta 7785775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 6899452 - 6899412
Alignment:
Q  45 taaatttctcttataaataggaccggaggtagtattatttt 85  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  6899452 taaatttttcttataaataggaccggaggtagtattatttt 6899412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 39571249 - 39571201
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  39571249 acttttgttgacccaaaattctcttataaataggaccggagggagtatt 39571201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 54658 - 54611
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  54658 acttttgttgacccaaaattctcttataaataggaccggagggagtat 54611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 2890208 - 2890161
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  2890208 acttttgttgacccaaaattctcttataaataggaccggagggagtat 2890161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 43199400 - 43199353
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  43199400 acttttgttgaccaaaaattctcttataaataggaccggagggagtat 43199353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 6552739 - 6552785
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  6552739 acttttgttgacccaaaattctcttataaataggaccggagggagta 6552785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 71
Target Start/End: Complemental strand, 13246851 - 13246801
Alignment:
Q  21 caaatacattcacttttgttgacctaaatttctcttataaataggaccgga 71  Q
    |||||||||||| ||||||||| | ||||||||||||||||||||| ||||    
T  13246851 caaatacattcatttttgttgatccaaatttctcttataaataggatcgga 13246801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 17006982 - 17006916
Alignment:
Q  7 ttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 73  Q
    |||| ||||||||||| || |||  ||||||||||||| || |||||||||||||||||| ||||||    
T  17006982 ttaacaattcagtccagatccatcaacttttgttgacccaactttctcttataaataggatcggagg 17006916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 17570265 - 17570331
Alignment:
Q  7 ttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 73  Q
    |||| ||||||||||| || |||  ||||||||||||| || |||||||||||||||||| ||||||    
T  17570265 ttaacaattcagtccagatccatcaacttttgttgacccaactttctcttataaataggatcggagg 17570331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 24692040 - 24692110
Alignment:
Q  10 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    |||||||||| || ||||||  |||||||||||||||| ||| |||||||||||||| || ||| ||||||    
T  24692040 aaaattcagttcagatacatcaacttttgttgacctaactttttcttataaataggatcgaagggagtatt 24692110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 34 - 80
Target Start/End: Complemental strand, 32211407 - 32211361
Alignment:
Q  34 ttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  32211407 ttttgttgacccaaaattctcttataaataggaccggagggagtatt 32211361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 33289307 - 33289261
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  33289307 acttttgttgacccaaaattctcttataaataggaccggagggagta 33289261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 82
Target Start/End: Complemental strand, 44498233 - 44498183
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtattat 82  Q
    |||||| |||||| ||| |||||||||||||||||||||||| ||||||||    
T  44498233 acttttattgacccaaaattctcttataaataggaccggagggagtattat 44498183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 7805745 - 7805696
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtatta 81  Q
    ||||||| ||||| ||| |||||||||||||||||||||||| |||||||    
T  7805745 acttttgctgacccaaaattctcttataaataggaccggagggagtatta 7805696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 88 - 141
Target Start/End: Complemental strand, 26925814 - 26925761
Alignment:
Q  88 tttcacttttctatatttttctatcaactatgaattctatcaagaattgtaata 141  Q
    |||||||||||||| ||||||| |||  |||||||||||| |||||||||||||    
T  26925814 tttcacttttctatgtttttctctcatatatgaattctataaagaattgtaata 26925761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 7012255 - 7012303
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||| | ||| |||||||||||||||||||||||| ||||||    
T  7012255 acttttgttgatccaaaattctcttataaataggaccggaggaagtatt 7012303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 72
Target Start/End: Complemental strand, 12343186 - 12343146
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggag 72  Q
    ||||||||||||| ||| |||||||||||||||||||||||    
T  12343186 acttttgttgaccaaaaattctcttataaataggaccggag 12343146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 12763700 - 12763652
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||||| ||| || ||||||||||||||||||||| ||||||    
T  12763700 acttttgttgacccaaaattatcttataaataggaccggagggagtatt 12763652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 34 - 86
Target Start/End: Complemental strand, 33057638 - 33057586
Alignment:
Q  34 ttttgttgacctaaatttctcttataaataggaccggaggtagtattattttc 86  Q
    ||||||||| | || ||| ||||||||||||||||||||| ||||||||||||    
T  33057638 ttttgttgatccaactttgtcttataaataggaccggagggagtattattttc 33057586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 3304324 - 3304278
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||| ||| || ||||||||||||||||||||| ||||    
T  3304324 acttttgttgacccaaaattttcttataaataggaccggagggagta 3304278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 31654697 - 31654743
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  31654697 acttttgttgacccaaaattcttttataaataggaccggaggaagta 31654743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 34 - 80
Target Start/End: Complemental strand, 32114519 - 32114473
Alignment:
Q  34 ttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||| ||| || ||||||||||||||||||||| ||||||    
T  32114519 ttttgttgacccaaaattttcttataaataggaccggagggagtatt 32114473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 21 - 66
Target Start/End: Original strand, 24203046 - 24203091
Alignment:
Q  21 caaatacattcacttttgttgacctaaatttctcttataaatagga 66  Q
    |||||| || ||||||| ||||| ||||||||||||||||||||||    
T  24203046 caaatatatccacttttattgacataaatttctcttataaatagga 24203091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 82
Target Start/End: Complemental strand, 35011236 - 35011207
Alignment:
Q  53 tcttataaataggaccggaggtagtattat 82  Q
    ||||||||||||||||||||||||||||||    
T  35011236 tcttataaataggaccggaggtagtattat 35011207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 15888398 - 15888350
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||||| ||| ||||||||||||||| || ||||| ||||||    
T  15888398 acttttgttgacccaaaattctcttataaatagaactggagggagtatt 15888350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 85; Significance: 3e-40; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 47833688 - 47833604
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattatttt 85  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47833688 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattatttt 47833604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 48336340 - 48336259
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattat 82  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48336340 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattat 48336259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 3372198 - 3372118
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatta 81  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3372198 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatta 3372118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 20538739 - 20538816
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20538739 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 20538816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 24704447 - 24704370
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24704447 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 24704370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 53337447 - 53337370
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53337447 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 53337370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 3993053 - 3992973
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatta 81  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  3993053 atctagttaaaaattcagtccaaatacattcacttttgttgaccgaaatttctcttataaataggaccggaggtagtatta 3992973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 42797809 - 42797729
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatta 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  42797809 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttatatataggaccggaggtagtatta 42797729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 26231654 - 26231576
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  26231654 atctagttaaaaattcagtccaaatacattcgcttttgttgacctaaatttctcttataaataggaccggaggtagtat 26231576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 33551278 - 33551200
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33551278 atctagttaaaaattcagtcaaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 33551200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 6121946 - 6122023
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  6121946 atctagttaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaataggaccggaggtagta 6122023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 46797802 - 46797725
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  46797802 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatagaaccggaggtagta 46797725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 4 - 79
Target Start/End: Original strand, 3904739 - 3904814
Alignment:
Q  4 tagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  3904739 tagttaaaaattcagtccaaatacattcacttttgttgacctaaatttcttttataaataggaccggaggtagtat 3904814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 43900626 - 43900547
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  43900626 atctagttaaaaattcagtccaaatacatttacttttgttgacctaaatttctcttataaataggaccggagggagtatt 43900547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 7579387 - 7579309
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  7579387 atctagttaaaaattcaatccaaatacattcacttttgttaacctaaatttctcttataaataggaccggaggtagtat 7579309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 47838670 - 47838748
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  47838670 atctagttaaaaattcagtccaaatacattcacttttgttgaccgaaatttctcttataaataggatcggaggtagtat 47838748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 51894635 - 51894716
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattat 82  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  51894635 atctggttaaaaattcagtccaaaaacattcacttttgttgacctaaatttttcttataaataggaccggaggtagtattat 51894716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 52756752 - 52756675
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  52756752 atctagttaaaaattcagtccaaatacattcacttatgttgacctaaatttctcttataaataggaccggagatagta 52756675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 33621873 - 33621795
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||    
T  33621873 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatagaaccgaaagtagtat 33621795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 40913246 - 40913320
Alignment:
Q  5 agttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  40913246 agttaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaataggaccggagggagtat 40913320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 41469819 - 41469898
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||    
T  41469819 atctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttcttttataaataggaccgaaggaagtatt 41469898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 5986950 - 5986876
Alignment:
Q  4 tagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||    
T  5986950 tagttaaaaattcagtccaaatacattcacttttgttgacctatatttctcttataaatagaatcggaggtagta 5986876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 3422137 - 3422073
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatagga 66  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  3422137 atctagttaaaaattcagttcaaatacattca-ttttgttgacctaaatttctcttataaatagga 3422073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 41615732 - 41615794
Alignment:
Q  4 tagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatagga 66  Q
    |||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  41615732 tagttaaaaattaagtccaaatacattaacttttgttgacctaattttctcttataaatagga 41615794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 6 - 79
Target Start/End: Complemental strand, 25855155 - 25855082
Alignment:
Q  6 gttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||||||||||||||| ||||||||||||  || ||||||| |||||||||||| |||| |||||    
T  25855155 gttaaaaattcagtccaaatacattaacttttgttgactcaactttctctcataaataggacctgagggagtat 25855082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 29845719 - 29845656
Alignment:
Q  4 tagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggac 67  Q
    |||||||||||||||| |||||| ||| | ||||||||||||||||||||||||||| ||||||    
T  29845719 tagttaaaaattcagttcaaatatattaatttttgttgacctaaatttctcttataagtaggac 29845656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 4780371 - 4780425
Alignment:
Q  24 atacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||||| ||||    
T  4780371 atacattaacttttgttgaccaaaatttctcttataaataggaccggagggagta 4780425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 47838663 - 47838610
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtattatttt 85  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||||||||    
T  47838663 acttttgttgaccaaaaattctcttataaataggaccggagggagtattatttt 47838610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 32 - 83
Target Start/End: Original strand, 3422144 - 3422195
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtattatt 83  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||||||    
T  3422144 acttttgttgacccaaaattctcttataaataggaccggagggagtattatt 3422195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 6 - 72
Target Start/End: Original strand, 17236845 - 17236912
Alignment:
Q  6 gttaaaaattcagtccaaa-tacattcacttttgttgacctaaatttctcttataaataggaccggag 72  Q
    ||||||||||||||| ||| |||||  ||||||||||||| |||||| ||||||||||||||||||||    
T  17236845 gttaaaaattcagtctaaaatacatcaacttttgttgacccaaatttttcttataaataggaccggag 17236912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 42797816 - 42797862
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||    
T  42797816 acttttgttgacctaaaattctcttataaataggaccggagggagta 42797862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 41469812 - 41469763
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtatta 81  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  41469812 acttttgttgaccaaaaattctcttataaataggaccggagggagtatta 41469763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 32 - 84
Target Start/End: Original strand, 48336347 - 48336399
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtattattt 84  Q
    ||||||||||||| ||| || ||||||||||||||||||||| ||||||||||    
T  48336347 acttttgttgacccaaaattttcttataaataggaccggagggagtattattt 48336399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 32 - 84
Target Start/End: Complemental strand, 51894628 - 51894576
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtattattt 84  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||| |||||    
T  51894628 acttttgttgacccaaaattctcttataaataggaccggagggagtaatattt 51894576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 5986950 - 5987009
Alignment:
Q  22 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatta 81  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||  |||||||    
T  5986950 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagagagtatta 5987009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 24704446 - 24704501
Alignment:
Q  24 atacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||| ||||||||||||| ||| ||||||||||||||||| |||||| |||||    
T  24704446 atacattaacttttgttgacccaaaattctcttataaataggatcggagggagtat 24704501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 6121939 - 6121893
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  6121939 acttttgttgacccaaaattctcttataaataggaccggagggagta 6121893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 46797809 - 46797855
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  46797809 acttttgttgacccaaaattctcttataaataggaccggagggagta 46797855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 47833695 - 47833741
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  47833695 acttttgttgacccaaaattctcttataaataggaccggagggagta 47833741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 50430471 - 50430533
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 63  Q
    |||| |||||||||||| |||||||||||  ||||||||||||| || || ||||||||||||    
T  50430471 atctggttaaaaattcaatccaaatacatcaacttttgttgacccaacttgctcttataaata 50430533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 34 - 79
Target Start/End: Complemental strand, 3904727 - 3904682
Alignment:
Q  34 ttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||| ||| |||||||||||||||||||||||| |||||    
T  3904727 ttttgttgacccaaaattctcttataaataggaccggagggagtat 3904682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 17344284 - 17344219
Alignment:
Q  7 ttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 72  Q
    ||||||||||||| || ||||||  |||||||||||  ||| |||||||||||||||| |||||||    
T  17344284 ttaaaaattcagttcagatacatcaacttttgttgatttaactttctcttataaatagaaccggag 17344219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 33621880 - 33621929
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtatta 81  Q
    ||||||||||||| ||| || ||||||||||||||||||||| |||||||    
T  33621880 acttttgttgacccaaaattatcttataaataggaccggagggagtatta 33621929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 32 - 73
Target Start/End: Complemental strand, 40913235 - 40913194
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagg 73  Q
    ||||||||||| | ||||||||||||||||||||||||||||    
T  40913235 acttttgttgatccaaatttctcttataaataggaccggagg 40913194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 20538730 - 20538686
Alignment:
Q  34 ttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||    
T  20538730 ttttgttgacccaaaattctcttataaataggaccggagggagta 20538686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 3993060 - 3993107
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||| ||| |||||||||||||| ||||||||| |||||    
T  3993060 acttttgttgacccaaaattctcttataaataagaccggagggagtat 3993107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 53337454 - 53337501
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    |||||| |||||| ||| |||||||||||||||||||||||| |||||    
T  53337454 acttttattgacccaaaattctcttataaataggaccggagggagtat 53337501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 3372205 - 3372251
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||| ||| || ||||||||||||||||||||| ||||    
T  3372205 acttttgttgacccaaaattatcttataaataggaccggagggagta 3372251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 7579394 - 7579440
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||| ||| ||||||||||||||| |||||||| ||||    
T  7579394 acttttgttgacccaaaattctcttataaatagaaccggaggaagta 7579440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 43900633 - 43900679
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||| ||| ||| |||||||||||||||||||||||| ||||    
T  43900633 acttttgttaacccaaaattctcttataaataggaccggaggaagta 43900679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 44900126 - 44900080
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||  ||| ||||||||||||||||||||||| ||||    
T  44900126 acttttgttgaccagaatatctcttataaataggaccggagggagta 44900080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 67
Target Start/End: Original strand, 6924746 - 6924802
Alignment:
Q  10 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggac 67  Q
    |||||| || ||||||||||| |||||||||||||||| ||| ||||||| |||||||    
T  6924746 aaaatttagaccaaatacattaacttttgttgacctaacttt-tcttatatataggac 6924802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 41615732 - 41615683
Alignment:
Q  22 aaatacattcacttttgttgacctaaatttctcttataaataggaccgga 71  Q
    ||||||||  ||||||||||| | || |||||||||||||||||||||||    
T  41615732 aaatacatcaacttttgttgatccaattttctcttataaataggaccgga 41615683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 83
Target Start/End: Complemental strand, 48361083 - 48361046
Alignment:
Q  46 aaatttctcttataaataggaccggaggtagtattatt 83  Q
    |||||| ||||||||||||||||||||| |||||||||    
T  48361083 aaatttttcttataaataggaccggagggagtattatt 48361046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 32822285 - 32822325
Alignment:
Q  24 atacattcacttttgttgacctaaatttctcttataaatag 64  Q
    |||||| || |||||||||||||||||| ||||||||||||    
T  32822285 atacatccatttttgttgacctaaatttttcttataaatag 32822325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 84; Significance: 1e-39; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 37149008 - 37149091
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattattt 84  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37149008 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattattt 37149091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 583066 - 582982
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattatttt 85  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  583066 atctagttaaaaattcagtccaaatacattcacttatgttgacctaaatttctcttataaataggaccggaggtagtattatttt 582982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 9395427 - 9395343
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattatttt 85  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  9395427 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtaatatttt 9395343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 20848151 - 20848071
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatta 81  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  20848151 atctagttaaaaattcagtccaaatacattcacttttattgacctaaatttctcttataaataggaccggaggtagtatta 20848071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 36563591 - 36563670
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  36563591 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggatcggaggtagtatt 36563670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 23360019 - 23359941
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  23360019 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccagaggtagtat 23359941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 41989460 - 41989538
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  41989460 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttacaaataggaccggaggtagtat 41989538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 11795245 - 11795168
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  11795245 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggatcggaggtagta 11795168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 13033128 - 13033050
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  13033128 atctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggaagtat 13033050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 13103101 - 13103023
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  13103101 atctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggaagtat 13103023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 26350403 - 26350480
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  26350403 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggatcggagggagta 26350480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 37642031 - 37641947
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttg-ttgacctaaatttctcttataaataggaccggaggtagtattattt 84  Q
    |||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  37642031 atctagttaaaaattcagtccacatacattcactttttattgacctaaatttctcttataaataggaccggaggtagtattattt 37641947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 17025701 - 17025622
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    |||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  17025701 atctagttaaaaattcagtttaaatacattcacttttgtggacctaaatttctcttataaataggaccggaggtagtatt 17025622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 4444037 - 4443958
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  4444037 atctatttaaaaattcagtctaaatacattcacttttgttgacctaaatttctcttataaataggaccgaaggaagtatt 4443958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 38361744 - 38361822
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||| |||||    
T  38361744 atctatttaaaaattcagtccaaatacattcacttttattgacctaaatttatcttataaataggatcggaggaagtat 38361822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 21576023 - 21575970
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 54  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21576023 atctaattaaaaattcagtccaaatacattcacttttgttgacctaaatttctc 21575970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 6126901 - 6126845
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctctta 57  Q
    ||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||    
T  6126901 atctagttaaaaatttagtccaaatacattcatttttgttgatctaaatttctctta 6126845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 13539920 - 13539986
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgga 71  Q
    |||||||||||||||||||| ||||  |||    |||||||||||||||||||||||||||||||||||||    
T  13539920 atctagttaaaaattcagtctaaatttatt----tttgttgacctaaatttctcttataaataggaccgga 13539986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 32 - 84
Target Start/End: Original strand, 9395434 - 9395486
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtattattt 84  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||||||||    
T  9395434 acttttgttgacccaaaattctcttataaataggaccggagggagtattattt 9395486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 32 - 84
Target Start/End: Original strand, 13103108 - 13103160
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtattattt 84  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||||||||    
T  13103108 acttttgttgacccaaaattctcttataaataggaccggagggagtattattt 13103160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 23360026 - 23360072
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||    
T  23360026 acttttgttgacccaaaattctcttataaataggaccggaggtagta 23360072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 32 - 84
Target Start/End: Original strand, 13033135 - 13033187
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtattattt 84  Q
    ||||||||||||| ||| ||||||||||||||||| |||||| ||||||||||    
T  13033135 acttttgttgacccaaaattctcttataaataggatcggagggagtattattt 13033187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 32 - 84
Target Start/End: Complemental strand, 36563584 - 36563532
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtattattt 84  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||| ||||    
T  36563584 acttttgttgacccaaaattctcttataaataggaccggagggagtatgattt 36563532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 41989453 - 41989405
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  41989453 acttttgttgacccaaaattctcttataaataggaccggagggagtatt 41989405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 17025708 - 17025755
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  17025708 acttttgttgacccaaaattctcttataaataggaccggagggagtat 17025755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 6126908 - 6126954
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  6126908 acttttgttgacccaaaattctcttataaataggaccggagggagta 6126954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 34 - 72
Target Start/End: Original strand, 11574166 - 11574204
Alignment:
Q  34 ttttgttgacctaaatttctcttataaataggaccggag 72  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  11574166 ttttgttgacctaaatgtctcttataaataggaccggag 11574204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 966224 - 966273
Alignment:
Q  24 atacattcacttttgttgacctaaatttctcttataaataggaccggagg 73  Q
    ||||||||| ||||||||| | |||||||||||||||||||||| |||||    
T  966224 atacattcatttttgttgatccaaatttctcttataaataggactggagg 966273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 2629620 - 2629675
Alignment:
Q  24 atacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||| |||||||||||||||||| | ||||||||| | ||||||||| |||||    
T  2629620 atacattaacttttgttgacctaaatatttcttataaacaagaccggaggaagtat 2629675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 11795252 - 11795299
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||| ||| |||||||||||||||||| ||||| |||||    
T  11795252 acttttgttgacccaaaattctcttataaataggactggagggagtat 11795299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 21576030 - 21576077
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||| | ||| |||||||||||||||||||||||| |||||    
T  21576030 acttttgttgatccaaaattctcttataaataggaccggagggagtat 21576077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 37642038 - 37642085
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    |||||| |||||| ||| |||||||||||||||||||||||| |||||    
T  37642038 acttttattgacccaaaattctcttataaataggaccggagggagtat 37642085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 37149001 - 37148955
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||| ||| |||| ||||||||||||||||||| ||||    
T  37149001 acttttgttgacccaaaattctattataaataggaccggagggagta 37148955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 72
Target Start/End: Complemental strand, 3549602 - 3549553
Alignment:
Q  23 aatacattcacttttgttgacctaaatttctcttataaataggaccggag 72  Q
    |||||||  ||||||||| |  ||||||||||||||||||||||||||||    
T  3549602 aatacatcaacttttgttaatataaatttctcttataaataggaccggag 3549553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 73
Target Start/End: Original strand, 4444044 - 4444085
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagg 73  Q
    ||||||||||| ||||| |||||||||||||| |||||||||    
T  4444044 acttttgttgatctaaaattctcttataaataagaccggagg 4444085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 27081014 - 27081063
Alignment:
Q  22 aaatacattcacttttgttgacctaaatttctcttataaataggaccgga 71  Q
    ||||||||  |||||||||||||||||| |||||| ||||||||| ||||    
T  27081014 aaatacatcaacttttgttgacctaaatgtctcttgtaaataggatcgga 27081063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 39290851 - 39290775
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||| ||||||||| | |||||||||||  | |||||||||||| |  ||||||||| |||||||||||||| ||||    
T  39290851 atctaattaaaaatttaatccaaatacatcaatttttgttgacctgatattctcttat-aataggaccggagggagta 39290775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 2366396 - 2366352
Alignment:
Q  20 ccaaatacattcacttttgttgacctaaatttctcttataaatag 64  Q
    ||||||||||  ||| ||||||||| |||||||||||||||||||    
T  2366396 ccaaatacatgaactcttgttgacccaaatttctcttataaatag 2366352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 82
Target Start/End: Complemental strand, 36417078 - 36417042
Alignment:
Q  46 aaatttctcttataaataggaccggaggtagtattat 82  Q
    ||||||||||| |||||||||||||||| ||||||||    
T  36417078 aaatttctcttgtaaataggaccggagggagtattat 36417042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 70
Target Start/End: Complemental strand, 36595818 - 36595782
Alignment:
Q  34 ttttgttgacctaaatttctcttataaataggaccgg 70  Q
    |||||||||||||| ||||||||||||||| ||||||    
T  36595818 ttttgttgacctaactttctcttataaataagaccgg 36595782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 84; Significance: 1e-39; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 4238671 - 4238588
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattattt 84  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4238671 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattattt 4238588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 22722008 - 22721927
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattat 82  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22722008 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattat 22721927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 38964469 - 38964385
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattatttt 85  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  38964469 atctagttaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaataggaccggaggtagtattatttt 38964385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 2787885 - 2787968
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattattt 84  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  2787885 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagatagtattattt 2787968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 44785449 - 44785528
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44785449 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 44785528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 19557105 - 19557183
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19557105 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 19557183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 49823434 - 49823512
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49823434 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 49823512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 10298056 - 10297979
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10298056 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 10297979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 8437502 - 8437422
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatta 81  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  8437502 atctagttaaaaattcagtccaaatacattcacttttattgacctaaatttctcttataaataggaccggaggtagtatta 8437422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 8817439 - 8817523
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattatttt 85  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  8817439 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgaaggtagtattttttt 8817523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 21295379 - 21295459
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatta 81  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21295379 atctaattaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatta 21295459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 34080083 - 34080163
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatta 81  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34080083 atcttgttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatta 34080163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 17653789 - 17653712
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  17653789 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 17653712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 37508998 - 37508921
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  37508998 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 37508921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 48340474 - 48340397
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  48340474 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttgtaaataggaccggaggtagta 48340397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 51406750 - 51406673
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  51406750 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagta 51406673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 40691049 - 40691129
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatta 81  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  40691049 atctagttaaaaattcagtccaaatacattcacttttgttaacctaaatttctcttataaataggaccggagttagtatta 40691129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 42507408 - 42507488
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatta 81  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  42507408 atctagttcaaaattcagtccaaatacattcacttttgttgacctaaatttctattataaataggaccggaggtagtatta 42507488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 9111547 - 9111626
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  9111547 atctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttctcttataaataggaccgaaggtagtatt 9111626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 36095733 - 36095811
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  36095733 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttatcttataaataggaccggagggagtat 36095811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 46208107 - 46208029
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  46208107 atctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtat 46208029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 35513550 - 35513473
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  35513550 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgaagggagta 35513473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 42170399 - 42170479
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatta 81  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  42170399 atctggttaaaaattcactccaaatacattcacttttgttgacctaaatttctcttataaataagaccggaggtagtatta 42170479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 6013389 - 6013461
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 73  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  6013389 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaattggactggagg 6013461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 33942985 - 33943055
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgga 71  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||||| ||||    
T  33942985 atctagttaaaaattcagtccaaatacattaacttttgttgacctaactttcttttataaataggatcgga 33943055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 17653796 - 17653844
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  17653796 acttttgttgacccaaaattctcttataaataggaccggaggtagtatt 17653844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 4238678 - 4238725
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  4238678 acttttgttgaccaaaaattctcttataaataggaccggaggtagtat 4238725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 37509005 - 37509052
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  37509005 acttttgttgacccaaaattctcttataaataggaccggaggtagtat 37509052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 46208114 - 46208161
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||    
T  46208114 acttttgttgacctaaaattctcttataaataggaccggagggagtat 46208161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 21295372 - 21295326
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||    
T  21295372 acttttgttgacctaaaattctcttataaataggaccggagggagta 21295326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 6013382 - 6013329
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtattatttt 85  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||| ||||||    
T  6013382 acttttgttgacccaaaattctcttataaataggaccggagggagtaatatttt 6013329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 23 - 72
Target Start/End: Complemental strand, 33128261 - 33128212
Alignment:
Q  23 aatacattcacttttgttgacctaaatttctcttataaataggaccggag 72  Q
    |||||||| ||||||||||||||||||||||||||||| |||||| ||||    
T  33128261 aatacattaacttttgttgacctaaatttctcttataattaggactggag 33128212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 10298063 - 10298111
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  10298063 acttttgttgacccaaaattctcttataaataggaccggagggagtatt 10298111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 40691042 - 40690994
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  40691042 acttttgttgacccaaaattctcttataaataggaccggagggagtatt 40690994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 32 - 83
Target Start/End: Complemental strand, 8817432 - 8817381
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtattatt 83  Q
    ||||||||||||| ||| |||||||||||||||||||||| | |||||||||    
T  8817432 acttttgttgacccaaaattctcttataaataggaccggaaggagtattatt 8817381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 49823427 - 49823380
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  49823427 acttttgttgacccaaaattctcttataaataggaccggagggagtat 49823380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 78
Target Start/End: Original strand, 9213588 - 9213646
Alignment:
Q  20 ccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||  | |||||||||||||||||||||| ||||||||||| ||||| ||||    
T  9213588 ccaaatacatcaatttttgttgacctaaatttctctaataaataggacgggagggagta 9213646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 19557098 - 19557052
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  19557098 acttttgttgacccaaaattctcttataaataggaccggagggagta 19557052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 34080076 - 34080030
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  34080076 acttttgttgacccaaaattctcttataaataggaccggagggagta 34080030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 38964476 - 38964522
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  38964476 acttttgttgaccaaaaattctcttataaataggaccggagggagta 38964522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 48340481 - 48340527
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  48340481 acttttgttgacccaaaattctcttataaataggaccggagggagta 48340527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 32 - 73
Target Start/End: Complemental strand, 9111540 - 9111499
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagg 73  Q
    ||||||||||||| ||| ||||||||||||||||||||||||    
T  9111540 acttttgttgacccaaaattctcttataaataggaccggagg 9111499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 32 - 73
Target Start/End: Complemental strand, 42507401 - 42507360
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagg 73  Q
    ||||||||||||| ||| ||||||||||||||||||||||||    
T  42507401 acttttgttgacccaaaattctcttataaataggaccggagg 42507360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 34 - 79
Target Start/End: Original strand, 51406759 - 51406804
Alignment:
Q  34 ttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||| ||| |||||||||||||||||||||||| |||||    
T  51406759 ttttgttgacccaaaattctcttataaataggaccggagggagtat 51406804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 9027188 - 9027140
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||||| || ||| ||||||||||||||||||||| ||||||    
T  9027188 acttttgttgacccaactttatcttataaataggaccggagggagtatt 9027140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 6 - 66
Target Start/End: Complemental strand, 43323132 - 43323072
Alignment:
Q  6 gttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaatagga 66  Q
    |||||||||| | |||||||||||  ||||||||||||| || ||| ||||||||||||||    
T  43323132 gttaaaaatttaatccaaatacatcaacttttgttgacccaattttttcttataaatagga 43323072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 8437509 - 8437556
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||  ||| |||||||||||||||||||||||| |||||    
T  8437509 acttttgttgactcaaaattctcttataaataggaccggagggagtat 8437556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 61
Target Start/End: Original strand, 8951954 - 8952009
Alignment:
Q  6 gttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaa 61  Q
    ||||||||||||||||||||||||| |||||||| ||   || |||||||||||||    
T  8951954 gttaaaaattcagtccaaatacattaacttttgtcgattcaactttctcttataaa 8952009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 80
Target Start/End: Complemental strand, 9213577 - 9213514
Alignment:
Q  17 agtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    |||||| ||||||  ||||||||||||  |||| ||| ||||||||||||||||||| ||||||    
T  9213577 agtccagatacatcaacttttgttgactaaaatgtcttttataaataggaccggagggagtatt 9213514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 71
Target Start/End: Original strand, 22722015 - 22722054
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccgga 71  Q
    ||||||||||||| ||| ||||||||||||||||||||||    
T  22722015 acttttgttgacccaaaattctcttataaataggaccgga 22722054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 68
Target Start/End: Original strand, 26001141 - 26001184
Alignment:
Q  25 tacattcacttttgttgacctaaatttctcttataaataggacc 68  Q
    |||||| |||||||||||| ||||||||||||||||||| ||||    
T  26001141 tacattaacttttgttgacttaaatttctcttataaatatgacc 26001184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 63
Target Start/End: Original strand, 29285838 - 29285873
Alignment:
Q  28 attcacttttgttgacctaaatttctcttataaata 63  Q
    |||||||||||||||||||||||| |||||||||||    
T  29285838 attcacttttgttgacctaaatttatcttataaata 29285873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 2787878 - 2787832
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||| ||||| ||| |||||||||||||||||||||||| ||||    
T  2787878 acttttgctgacccaaaattctcttataaataggaccggagggagta 2787832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 44785442 - 44785396
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||| ||| ||||||||||||||| |||||||| ||||    
T  44785442 acttttgttgacccaaaattctcttataaatagaaccggaggaagta 44785396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 45652123 - 45652066
Alignment:
Q  24 atacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatta 81  Q
    |||||| || ||||||||||  |||| ||||||||||||||||| ||||| |||||||    
T  45652123 atacatccatttttgttgactcaaatgtctcttataaataggactggagggagtatta 45652066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 78
Target Start/End: Original strand, 2131734 - 2131802
Alignment:
Q  10 aaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| || ||| ||||||  ||||||||||||| |||| ||||| |||| |||||||||||| ||||    
T  2131734 aaaatttagaccagatacatcaacttttgttgacccaaatgtctctcataagtaggaccggagggagta 2131802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 32 - 68
Target Start/End: Complemental strand, 42170392 - 42170356
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggacc 68  Q
    ||||||||||||| ||| |||||||||||||||||||    
T  42170392 acttttgttgacccaaaattctcttataaataggacc 42170356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 83; Significance: 4e-39; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 1738500 - 1738582
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattatt 83  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1738500 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattatt 1738582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 7240826 - 7240745
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattat 82  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7240826 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattat 7240745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 1565782 - 1565861
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1565782 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 1565861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 46840937 - 46840858
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46840937 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 46840858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 38063966 - 38064044
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38063966 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 38064044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 9268833 - 9268752
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattat 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  9268833 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccagaggtagtattat 9268752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 23314192 - 23314269
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23314192 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 23314269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 31319452 - 31319529
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31319452 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 31319529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 7482302 - 7482218
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattatttt 85  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  7482302 atctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtataatttt 7482218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 28536804 - 28536882
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28536804 atctagttaaaaattcattccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 28536882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 22285776 - 22285695
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattat 82  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  22285776 atctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagtattat 22285695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 36583472 - 36583395
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36583472 atctagttaaaaattaagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 36583395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 94371 - 94448
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  94371 atctagttaaaaattctgtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagatagta 94448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 36016249 - 36016326
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  36016249 atctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagggagta 36016326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 38441537 - 38441460
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  38441537 atctagttaaaaattcagttcaaatacattcacttttgttgacataaatttctcttataaataggaccggaggtagta 38441460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 4790325 - 4790247
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  4790325 atctagttaaaaatttagtccaaatacattcatttttgttgacctaaatttttcttataaataggaccggaggtagtat 4790247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 33418453 - 33418392
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 62  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  33418453 atctatttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttaaaaat 33418392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 9575486 - 9575407
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    |||||||||||||||||||| |||||| || ||||||||||||| || ||||||||| |||||||||| |||| ||||||    
T  9575486 atctagttaaaaattcagtctaaatacgttaacttttgttgacccaactttctcttacaaataggaccagagggagtatt 9575407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 40840175 - 40840243
Alignment:
Q  4 tagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 72  Q
    ||||||||||||||||||||||||||| | ||||||| || ||| |||||||| |||||||||||||||    
T  40840175 tagttaaaaattcagtccaaatacattgatttttgttaacttaactttctcttctaaataggaccggag 40840243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 32 - 90
Target Start/End: Original strand, 7482309 - 7482367
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtattattttcattt 90  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||||||||| ||||    
T  7482309 acttttgttgacccaaaattctcttataaataggaccggagggagtattattttgattt 7482367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 7240833 - 7240886
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtattatttt 85  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||||||||    
T  7240833 acttttgttgacccaaaattctcttataaataggaccggagggagtattatttt 7240886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 86 - 137
Target Start/End: Original strand, 260175 - 260226
Alignment:
Q  86 catttcacttttctatatttttctatcaactatgaattctatcaagaattgt 137  Q
    |||||||||||||||||||||||| |||| ||||| ||||||||||||||||    
T  260175 catttcacttttctatatttttctctcaattatgagttctatcaagaattgt 260226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 1738493 - 1738444
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtatta 81  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  1738493 acttttgttgacccaaaattctcttataaataggaccggagggagtatta 1738444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 9268840 - 9268887
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  9268840 acttttgttgacccaaaattctcttataaataggaccggagggagtat 9268887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 22285783 - 22285829
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  22285783 acttttgttgacccaaaattctcttataaataggaccggagggagta 22285829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 23314185 - 23314139
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  23314185 acttttgttgacccaaaattctcttataaataggaccggagggagta 23314139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 38441544 - 38441590
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  38441544 acttttgttgacccaaaattctcttataaataggaccggaggaagta 38441590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 46840944 - 46840990
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  46840944 acttttgttgacccaaaattctcttataaataggaccggagggagta 46840990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 36583479 - 36583528
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtatta 81  Q
    ||||||||||||| ||| ||||||||||||||||| |||||| |||||||    
T  36583479 acttttgttgacccaaaattctcttataaataggatcggagggagtatta 36583528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 38063959 - 38063910
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtatta 81  Q
    ||||||||||||| ||| ||||||||||||||||||| |||| |||||||    
T  38063959 acttttgttgacccaaaattctcttataaataggaccagagggagtatta 38063910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 72
Target Start/End: Original strand, 33418460 - 33418500
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggag 72  Q
    ||||||||||||| ||| |||||||||||||||||||||||    
T  33418460 acttttgttgacccaaaattctcttataaataggaccggag 33418500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 4790332 - 4790379
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    |||||| |||||| ||| |||||||||||||||||||||||| |||||    
T  4790332 acttttattgacccaaaattctcttataaataggaccggaggaagtat 4790379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 71
Target Start/End: Complemental strand, 40840165 - 40840126
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccgga 71  Q
    ||||||||||||  ||||||||||||||||||||||||||    
T  40840165 acttttgttgacaaaaatttctcttataaataggaccgga 40840126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 71
Target Start/End: Original strand, 46877666 - 46877713
Alignment:
Q  24 atacattcacttttgttgacctaaatttctcttataaataggaccgga 71  Q
    ||||||| ||||||||||||| || ||||||||||| |||||||||||    
T  46877666 atacattaacttttgttgacccaactttctcttatatataggaccgga 46877713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 94364 - 94318
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||| ||| ||||||||||||||||| |||||| ||||    
T  94364 acttttgttgacccaaaattctcttataaataggatcggagggagta 94318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 46 - 84
Target Start/End: Original strand, 3411449 - 3411487
Alignment:
Q  46 aaatttctcttataaataggaccggaggtagtattattt 84  Q
    ||||||||||||||||||||| |||||| ||||||||||    
T  3411449 aaatttctcttataaataggatcggagggagtattattt 3411487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 31319445 - 31319399
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||| ||| ||||||||||||||| |||||||| ||||    
T  31319445 acttttgttgacccaaaattctcttataaatagaaccggagggagta 31319399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 77 - 135
Target Start/End: Original strand, 39226137 - 39226195
Alignment:
Q  77 tattattttcatttcacttttctatatttttctatcaactatgaattctatcaagaatt 135  Q
    ||||||||||||||||||||| ||| ||||| | || | ||| ||||||||||||||||    
T  39226137 tattattttcatttcacttttgtatttttttttctcgattataaattctatcaagaatt 39226195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 7269458 - 7269535
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||| ||||||||||||||  | ||||||  | ||||||||||| || ||| ||||||||||| ||||||||| ||||    
T  7269458 atctggttaaaaattcagtttagatacatcaatttttgttgacccaactttttcttataaataagaccggagggagta 7269535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 9575495 - 9575539
Alignment:
Q  34 ttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||| || ||||||||||||||||||||| ||| ||||    
T  9575495 ttttgttgaccaaactttctcttataaataggaccgaagggagta 9575539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 32 - 84
Target Start/End: Complemental strand, 28536797 - 28536745
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtattattt 84  Q
    |||||| |||| | ||| |||||||||||||||||||||||| ||||| ||||    
T  28536797 acttttattgatccaaaattctcttataaataggaccggagggagtatcattt 28536745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 32 - 68
Target Start/End: Complemental strand, 36016242 - 36016206
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggacc 68  Q
    ||||||||||||| ||| |||||||||||||||||||    
T  36016242 acttttgttgacccaaaattctcttataaataggacc 36016206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 82; Significance: 2e-38; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 23862 - 23781
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattat 82  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23862 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattat 23781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 32 - 84
Target Start/End: Original strand, 23869 - 23921
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtattattt 84  Q
    ||||||||||||| ||| || ||||||||||||||||||||| ||||||||||    
T  23869 acttttgttgacccaaaattttcttataaataggaccggagggagtattattt 23921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 82; Significance: 2e-38; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 27159411 - 27159492
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattat 82  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27159411 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattat 27159492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 44668146 - 44668227
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattat 82  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44668146 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattat 44668227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 26471118 - 26471198
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatta 81  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26471118 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatta 26471198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 9981724 - 9981646
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9981724 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 9981646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 31842848 - 31842925
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31842848 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 31842925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 39402019 - 39402096
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39402019 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 39402096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 47216752 - 47216829
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47216752 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 47216829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 11796010 - 11795931
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11796010 atctagttaaaaattcagtccaaatgcattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 11795931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 14984914 - 14984835
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  14984914 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagatagtatt 14984835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 34042773 - 34042695
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  34042773 atctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagtat 34042695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 1050965 - 1050888
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1050965 atctagttaaaaattcagtccaaatgcattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 1050888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 23278054 - 23278131
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  23278054 atctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaataggaccggaggtagta 23278131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 44955259 - 44955336
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  44955259 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttttcttataaataggaccggaggtagta 44955336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 4 - 81
Target Start/End: Original strand, 12483684 - 12483761
Alignment:
Q  4 tagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatta 81  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12483684 tagttcaaaattcagtctaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatta 12483761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 47777534 - 47777611
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  47777534 atctagttcaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgggggtagta 47777611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 47588390 - 47588470
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatta 81  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  47588390 atctaattaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataagaccagaggtagtatta 47588470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 25694396 - 25694315
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattat 82  Q
    ||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||| | |||| ||||||||    
T  25694396 atctagttaaaaattcaatccaaatacattcacttttattgatctaaatttctcttataaataggatcagagggagtattat 25694315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 47969772 - 47969700
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctc-ttataaataggaccggag 72  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  47969772 atctagttaaaaattcagtctaaatacatttacttttgttgacctaaatttctctttataaataggaccggag 47969700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 17556830 - 17556751
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattca-cttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||| |||| |||||    
T  17556830 atctagttaaaaattcagtccaaatacatttaacttttgttgacctaactttctcttataaataggaccagagggagtat 17556751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 6 - 84
Target Start/End: Complemental strand, 11897126 - 11897048
Alignment:
Q  6 gttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattattt 84  Q
    |||||||||||||| || ||||||  |||||||||||||||| ||||||||||||||||||||||||| ||||| ||||    
T  11897126 gttaaaaattcagttcagatacatcaacttttgttgacctaactttctcttataaataggaccggagggagtatcattt 11897048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 16448161 - 16448239
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    |||| ||| ||||||||||||| ||||||  ||||||||||||| || ||||||||||||||||||||||||| |||||    
T  16448161 atctggttcaaaattcagtccagatacatcaacttttgttgacccaactttctcttataaataggaccggagggagtat 16448239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 77 - 141
Target Start/End: Original strand, 43182286 - 43182350
Alignment:
Q  77 tattattttcatttcacttttctatatttttctatcaactatgaattctatcaagaattgtaata 141  Q
    |||||||| ||||||||||||||||| |||||| |||| ||||| ||||||||||||||||||||    
T  43182286 tattatttccatttcacttttctatacttttctctcaattatgagttctatcaagaattgtaata 43182350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 11897138 - 11897186
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  11897138 acttttgttgacccaaatttctcttataaataggaccggagggagtatt 11897186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 79
Target Start/End: Original strand, 12213530 - 12213605
Alignment:
Q  4 tagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    |||||||||||||| || ||||||||| | ||||||||||||||  |||||||||||||| ||| ||||| |||||    
T  12213530 tagttaaaaattcaatctaaatacattaatttttgttgacctaacattctcttataaataagactggagggagtat 12213605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 12483684 - 12483625
Alignment:
Q  22 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatta 81  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  12483684 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagtatta 12483625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 37552217 - 37552272
Alignment:
Q  24 atacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||| || |||||    
T  37552217 atacattcatttttgttgacccaaatttctcttataaataggaccggggggagtat 37552272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 9981731 - 9981784
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtattatttt 85  Q
    ||||||||||||| ||| |||||||||||||||||||||||| | |||||||||    
T  9981731 acttttgttgacccaaaattctcttataaataggaccggagggaatattatttt 9981784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 14984921 - 14984970
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtatta 81  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  14984921 acttttgttgacccaaaattctcttataaataggaccggagggagtatta 14984970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 37552218 - 37552141
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||| ||||||||||||||||| ||||||  ||| ||||||||  || ||| ||||||||||||||||||||| ||||    
T  37552218 atctggttaaaaattcagtccagatacatgaactgttgttgactcaactttatcttataaataggaccggagggagta 37552141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 77 - 141
Target Start/End: Complemental strand, 38503798 - 38503734
Alignment:
Q  77 tattattttcatttcacttttctatatttttctatcaactatgaattctatcaagaattgtaata 141  Q
    |||||||||||||||||||||| ||| |||||| |||| ||||| || ||||||||||| |||||    
T  38503798 tattattttcatttcacttttcgatacttttctctcaattatgagttatatcaagaattataata 38503734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 32 - 72
Target Start/End: Complemental strand, 44955252 - 44955212
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggag 72  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  44955252 acttttgttgacctaaaattctcttataaataggaccggag 44955212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 17556837 - 17556884
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||| || ||||||||||||||||||||||||| |||||    
T  17556837 acttttgttgacccaagtttctcttataaataggaccggagggagtat 17556884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 25694403 - 25694450
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  25694403 acttttgttgacccaaaattctcttataaataggaccggagggagtat 25694450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 11796017 - 11796063
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  11796017 acttttgttgacccaaaattctcttataaataggaccggagggagta 11796063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 27159404 - 27159358
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  27159404 acttttgttgacccaaaattctcttataaataggaccggagggagta 27159358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 31842841 - 31842795
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  31842841 acttttgttgacccaaaattctcttataaataggaccggagggagta 31842795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 39402012 - 39401966
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  39402012 acttttgttgacccaaaattctcttataaataggaccggagggagta 39401966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 44668139 - 44668093
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  44668139 acttttgttgacccaaaattctcttataaataggaccggagggagta 44668093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 47777527 - 47777481
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  47777527 acttttgttgacccaaaattctcttataaataggaccggagggagta 47777481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 5392218 - 5392283
Alignment:
Q  20 ccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattatttt 85  Q
    ||||||||||  |||||| ||||||||||||||||||||| || |||||| ||  |||||||||||    
T  5392218 ccaaatacatcaacttttattgacctaaatttctcttatatattggaccgaagagagtattatttt 5392283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 11989853 - 11989796
Alignment:
Q  6 gttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 63  Q
    ||||||||||||||||||||| |||   ||||||||||| || |||||||||||||||    
T  11989853 gttaaaaattcagtccaaatatattagtttttgttgacccaactttctcttataaata 11989796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 1050972 - 1051020
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||| ||||||| ||| |||||||||||||||||||||||| ||||||    
T  1050972 actttagttgacccaaaattctcttataaataggaccggagggagtatt 1051020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 34042780 - 34042828
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||||| ||| ||||||||||||||| |||||||| ||||||    
T  34042780 acttttgttgacccaaaattctcttataaatagaaccggagggagtatt 34042828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 47216745 - 47216698
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||| ||| ||||||||||||||| |||||||| |||||    
T  47216745 acttttgttgacccaaaattctcttataaatagtaccggagggagtat 47216698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 51 - 85
Target Start/End: Complemental strand, 14281616 - 14281582
Alignment:
Q  51 tctcttataaataggaccggaggtagtattatttt 85  Q
    |||||| ||||||||||||||||||||||||||||    
T  14281616 tctcttgtaaataggaccggaggtagtattatttt 14281582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 51 - 85
Target Start/End: Complemental strand, 23398106 - 23398072
Alignment:
Q  51 tctcttataaataggaccggaggtagtattatttt 85  Q
    |||||| ||||||||||||||||||||||||||||    
T  23398106 tctcttgtaaataggaccggaggtagtattatttt 23398072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 26471111 - 26471065
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||| | ||| |||||||||||||||||||||||| ||||    
T  26471111 acttttgttgatccaaaattctcttataaataggaccggagggagta 26471065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 45 - 79
Target Start/End: Original strand, 47678371 - 47678405
Alignment:
Q  45 taaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||| |||||||||||||||||||||||||||    
T  47678371 taaatttttcttataaataggaccggaggtagtat 47678405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 80
Target Start/End: Original strand, 9302041 - 9302070
Alignment:
Q  51 tctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||||||||||||||||||||||    
T  9302041 tctcttataaataggaccggaggtagtatt 9302070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 42 - 79
Target Start/End: Original strand, 39720779 - 39720816
Alignment:
Q  42 acctaaatttctcttataaataggaccggaggtagtat 79  Q
    |||||| | |||||||||||||||||||||||||||||    
T  39720779 acctaattgtctcttataaataggaccggaggtagtat 39720816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 47969779 - 47969832
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtattatttt 85  Q
    ||||||||||| | ||| || | ||||||||||||||||||| |||||||||||    
T  47969779 acttttgttgatccaaaattattttataaataggaccggagggagtattatttt 47969832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 24 - 68
Target Start/End: Original strand, 12062635 - 12062679
Alignment:
Q  24 atacattcacttttgttgacctaaatttctcttataaataggacc 68  Q
    ||||||| | |||||||||  ||||||||||||||||||||||||    
T  12062635 atacattaatttttgttgatttaaatttctcttataaataggacc 12062679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 19391948 - 19392004
Alignment:
Q  22 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||| ||||||||| ||  || ||||||||||| ||||||| ||||||||||    
T  19391948 aaatacattaacttttgttcactcaactttctcttatatataggactggaggtagta 19392004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 81; Significance: 7e-38; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 8383022 - 8383102
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatta 81  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8383022 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatta 8383102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 13853646 - 13853730
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattatttt 85  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  13853646 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgaaggtagtattatttt 13853730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 33052847 - 33052926
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33052847 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 33052926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 2830412 - 2830334
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2830412 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 2830334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 11572198 - 11572276
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11572198 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 11572276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 6330192 - 6330115
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6330192 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 6330115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 26602400 - 26602323
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26602400 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 26602323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 8099607 - 8099529
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8099607 atctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 8099529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 35031054 - 35031132
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  35031054 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttttcttataaataggaccggaggtagtat 35031132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 9644773 - 9644689
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattatttt 85  Q
    |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  9644773 atctagttaaaaattcagtccaaatacattcatttatgttgacctaaatttctcttataaataggaccggaggtagtaatatttt 9644689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 9650790 - 9650706
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattatttt 85  Q
    |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  9650790 atctagttaaaaattcagtccaaatacattcatttatgttgacctaaatttctcttataaataggaccggaggtagtaatatttt 9650706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 6143631 - 6143553
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  6143631 atctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctcttataaataggatcggaggtagtat 6143553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 6068643 - 6068562
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattat 82  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  6068643 atctagttaaaaattcaatccaaatacattcacttttattgacctaaatttttcttataaataggaccggaggtagtattat 6068562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 8417846 - 8417928
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattatt 83  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||||    
T  8417846 atctagttaaaaattcaatccaaatacattcacttttgttgacctaaatttctcttataaataagaccagagggagtattatt 8417928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 13043835 - 13043758
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  13043835 atctagttaaaaattcaattcaaatacattcatttttgttgacctaaatttctcttataaatagaaccggaggtagta 13043758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 28747187 - 28747248
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaat 62  Q
    ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  28747187 atctaattaaaaattcagtccaaatacattcacttttgttgatctaaatttctcttataaat 28747248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 6068997 - 6069062
Alignment:
Q  5 agttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccgg 70  Q
    ||||||||||| || ||||||||||| |||||||||||||||||| ||| ||||||||||||||||    
T  6068997 agttaaaaatttagaccaaatacattaacttttgttgacctaaatatcttttataaataggaccgg 6069062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 17992065 - 17992018
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaa 48  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  17992065 atctagttaaaaattcaatccaaatacattcacttttattgacctaaa 17992018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 22 - 79
Target Start/End: Original strand, 3788111 - 3788168
Alignment:
Q  22 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||  |||||||||||||||||||| ||||||||||| ||||||||| |||||    
T  3788111 aaatacatcaacttttgttgacctaaatttatcttataaataagaccggagggagtat 3788168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 8099614 - 8099667
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtattatttt 85  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||| ||||    
T  8099614 acttttgttgacccaaaattctcttataaataggaccggagggagtattttttt 8099667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 22896539 - 22896471
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||         |||||||||||| |||||||||||||||||||||||| ||||    
T  22896539 atctagttaaaaattcagtccaaatac---------tgttgacctaaacttctcttataaataggaccggagggagta 22896471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 26602407 - 26602456
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtatta 81  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  26602407 acttttgttgacccaaaattctcttataaataggaccggagggagtatta 26602456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 9644780 - 9644828
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  9644780 acttttgttgacccaaaattctcttataaataggaccggagggagtatt 9644828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 9650797 - 9650845
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  9650797 acttttgttgacccaaaattctcttataaataggaccggagggagtatt 9650845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 6330199 - 6330246
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  6330199 acttttgttgacccaaaattctcttataaataggaccggagggagtat 6330246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 11572191 - 11572144
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  11572191 acttttgttgacccaaaattctcttataaataggaccggagggagtat 11572144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 13853639 - 13853592
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  13853639 acttttgttgacccaaaattctcttataaataggaccggagggagtat 13853592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 2830419 - 2830465
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  2830419 acttttgttgacccaaaattctcttataaataggaccggagggagta 2830465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 6549940 - 6549902
Alignment:
Q  21 caaatacattcacttttgttgacctaaatttctcttata 59  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  6549940 caaatacattaacttttgttgacctaaatttctcttata 6549902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 8383015 - 8382969
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  8383015 acttttgttgacccaaaattctcttataaataggaccggagggagta 8382969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 34 - 79
Target Start/End: Complemental strand, 35031045 - 35031000
Alignment:
Q  34 ttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||| ||| |||||||||||||||||||||||| |||||    
T  35031045 ttttgttgacccaaaattctcttataaataggaccggaggaagtat 35031000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 14936510 - 14936582
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggagg 73  Q
    |||||||||| ||||   |||||||||||  ||| ||||||||| |||| |||||||||||||||||| ||||    
T  14936510 atctagttaagaatttgttccaaatacatcaactattgttgacccaaatatctcttataaataggaccagagg 14936582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 6068650 - 6068697
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||  ||| |||||||||||||||||||||||| |||||    
T  6068650 acttttgttgactcaaaattctcttataaataggaccggagggagtat 6068697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 8417839 - 8417793
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||| ||| ||||    
T  8417839 acttttgttgacccaaaattctcttataaataggaccgaagggagta 8417793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 109
Target Start/End: Original strand, 1243841 - 1243870
Alignment:
Q  80 tattttcatttcacttttctatatttttct 109  Q
    ||||||||||||||||||||||||||||||    
T  1243841 tattttcatttcacttttctatatttttct 1243870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 67
Target Start/End: Complemental strand, 12473684 - 12473651
Alignment:
Q  34 ttttgttgacctaaatttctcttataaataggac 67  Q
    |||| |||||||||||||||||||||||||||||    
T  12473684 ttttattgacctaaatttctcttataaataggac 12473651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 17992074 - 17992118
Alignment:
Q  34 ttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||| ||| |||||||||||||||||||| ||| ||||    
T  17992074 ttttgttgacccaaaattctcttataaataggaccgaagggagta 17992118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 33052840 - 33052792
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    |||||| |||||| ||| |||||||||||||||||||||| | ||||||    
T  33052840 acttttattgacccaaaattctcttataaataggaccggatggagtatt 33052792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 7e-38; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 41478692 - 41478776
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattatttt 85  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  41478692 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattttttt 41478776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 15896919 - 15896836
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattattt 84  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  15896919 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtataattt 15896836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 37990066 - 37990145
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37990066 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 37990145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 3055635 - 3055557
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3055635 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 3055557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 4683985 - 4684063
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4683985 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 4684063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 44397624 - 44397546
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44397624 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 44397546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 44398763 - 44398685
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44398763 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 44398685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 13197763 - 13197840
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13197763 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 13197840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 16044370 - 16044447
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16044370 atctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 16044447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 37666663 - 37666740
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37666663 atctagttaaaaattcagttcaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 37666740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 13344561 - 13344482
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  13344561 atctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttctcttataaatagaaccggaggtagtatt 13344482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 15372303 - 15372220
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattattt 84  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  15372303 atctcgttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggactggagggagtattattt 15372220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 16243836 - 16243914
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  16243836 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttttcttataaataggaccggagatagtat 16243914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 38917575 - 38917653
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  38917575 atctagttaaaaattcagtccaaatacattcacttttattgacctaaatttatcttataaataggaccggaggtagtat 38917653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 6648572 - 6648649
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  6648572 atctagttaaaaattcagtccaaatacattcatttatgttgacctaaatttctcttataaataggaccggaggtagta 6648649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 9047808 - 9047886
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||    
T  9047808 atctagttaaaaattcagtccaaatacattcactttttttgacctaaatttctcttataaatatgaccggagatagtat 9047886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 12337990 - 12338067
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| |||||||||||||    
T  12337990 atctagttaaaaattcagtccaaatacattcatttttgttgacctaaatttttcttataaatagaaccggaggtagta 12338067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 30099235 - 30099310
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtag 76  Q
    ||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  30099235 atctaattaaaaattcaatccaaatacattcatttttgttgacctaaatttctcttataaataggatcggaggtag 30099310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 41492949 - 41493015
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggac 67  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  41492949 atctagttaaaaattctgtccaaatacattcacttttgttgacctaaatttcttttataaataggac 41493015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 12170455 - 12170529
Alignment:
Q  4 tagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||||||||||||||||| |||||| ||||||||| |||||||| ||||||||| |||||| ||||    
T  12170455 tagttaaaaattcagtccaaatacattaacttttattgacctaattttctcttgtaaataggatcggagggagta 12170529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 31150730 - 31150659
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggag 72  Q
    ||||||||||||||| |||||||||||||  ||||||||||||  || |||||||||||||||||| |||||    
T  31150730 atctagttaaaaatttagtccaaatacataaacttttgttgacgcaactttctcttataaataggatcggag 31150659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 32 - 86
Target Start/End: Complemental strand, 6648565 - 6648511
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtattattttc 86  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||    
T  6648565 acttttgttgacccaaaattctcttataaataggaccggagggagtattattttc 6648511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 41492942 - 41492893
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtatta 81  Q
    ||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  41492942 acttttgttgacccaaatttctcttataaataggaccggagggagtatta 41492893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 44804631 - 44804680
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatt 50  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||    
T  44804631 atctagttaaaaattcagtccaaatacattcatttatgttgacctaaatt 44804680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 9047801 - 9047752
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtatta 81  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  9047801 acttttgttgacccaaaattctcttataaataggaccggagggagtatta 9047752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 13197756 - 13197703
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtattatttt 85  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||| ||||||    
T  13197756 acttttgttgacccaaaattctcttataaataggaccggagggagtagtatttt 13197703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 85
Target Start/End: Original strand, 23227344 - 23227409
Alignment:
Q  20 ccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattatttt 85  Q
    ||||||||||  ||||||||||||| |||| ||||||||||||||||| | ||| |||||||||||    
T  23227344 ccaaatacatcaacttttgttgaccaaaatgtctcttataaataggactgaaggaagtattatttt 23227409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 41478685 - 41478636
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtatta 81  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||||    
T  41478685 acttttgttgacccaaaattctcttataaataggaccggagggagtatta 41478636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 3055642 - 3055690
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  3055642 acttttgttgacccaaaattctcttataaataggaccggagggagtatt 3055690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 32 - 84
Target Start/End: Complemental strand, 16243829 - 16243777
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtattattt 84  Q
    ||||||||||||| ||| |||||||||||||||||||||| | ||||||||||    
T  16243829 acttttgttgacccaaaattctcttataaataggaccggatggagtattattt 16243777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 37990059 - 37990011
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  37990059 acttttgttgacccaaaattctcttataaataggaccggagggagtatt 37990011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 81 - 141
Target Start/End: Complemental strand, 8912457 - 8912395
Alignment:
Q  81 attttcatttcacttttctatatttttctatcaactatgaattc--tatcaagaattgtaata 141  Q
    |||| |||||||||||||||||||||||| |||| ||||| |||  |||||||||||||||||    
T  8912457 atttccatttcacttttctatatttttctctcaattatgagttctatatcaagaattgtaata 8912395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 38917568 - 38917521
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  38917568 acttttgttgacccaaaattctcttataaataggaccggagggagtat 38917521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 44398770 - 44398817
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  44398770 acttttgttgacccaaaattctcttataaataggaccggagggagtat 44398817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 12337983 - 12337937
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  12337983 acttttgttgacccaaaattctcttataaataggaccggagggagta 12337937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 13724160 - 13724102
Alignment:
Q  20 ccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||  ||||||||||||||| || |||||| |||||||||||||||| ||||    
T  13724160 ccaaatacatcaacttttgttgacctagatgtctcttgtaaataggaccggagggagta 13724102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 15372310 - 15372356
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  15372310 acttttgttgacccaaaattctcttataaataggaccggagggagta 15372356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 15896926 - 15896972
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  15896926 acttttgttgacccaaaattctcttataaataggaccggagggagta 15896972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 16734855 - 16734802
Alignment:
Q  6 gttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttata 59  Q
    ||||||||||||||||| ||||||  ||||||||||||| || |||||||||||    
T  16734855 gttaaaaattcagtccagatacatcaacttttgttgaccaaactttctcttata 16734802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 37666656 - 37666607
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtatta 81  Q
    ||||| ||||||| ||| |||||||||||||||||||||||| |||||||    
T  37666656 actttagttgacccaaaattctcttataaataggaccggagggagtatta 37666607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 41453131 - 41453090
Alignment:
Q  6 gttaaaaattcagtccaaatacattcacttttgttgacctaa 47  Q
    ||||||||||||||||||||||||| |||||| |||||||||    
T  41453131 gttaaaaattcagtccaaatacattaacttttattgacctaa 41453090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 4553069 - 4553125
Alignment:
Q  7 ttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaata 63  Q
    ||||||||||| |||||||||||  | ||||||||||| || |||||||||||||||    
T  4553069 ttaaaaattcaatccaaatacatctatttttgttgaccaaactttctcttataaata 4553125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 12170455 - 12170392
Alignment:
Q  22 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtattatttt 85  Q
    ||||||||  ||||||||||||| || ||||||||||||||| || |||| | |||||||||||    
T  12170455 aaatacatcaacttttgttgacccaagtttctcttataaataagatcggatgaagtattatttt 12170392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 13344568 - 13344615
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||| | ||| |||||||||||||||||||||||| |||||    
T  13344568 acttttgttgatccaaaattctcttataaataggaccggagggagtat 13344615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 30099228 - 30099181
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||| ||| |||||| ||||||||||||||||| |||||    
T  30099228 acttttgttgacccaaaattctctaataaataggaccggagggagtat 30099181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 44397631 - 44397678
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||| ||| ||||||||||||||||||||| || |||||    
T  44397631 acttttgttgacccaaaattctcttataaataggaccggggggagtat 44397678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 16044363 - 16044317
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||| ||||||| ||| |||||||||||||||||||||||| ||||    
T  16044363 actttagttgacccaaaattctcttataaataggaccggagggagta 16044317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 13 - 79
Target Start/End: Original strand, 30852682 - 30852748
Alignment:
Q  13 attcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    |||||||| | ||||||  |||||| || | |||| ||||||||||||||||||||||||| |||||    
T  30852682 attcagtctagatacataaacttttattaatctaactttctcttataaataggaccggagggagtat 30852748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 10069283 - 10069340
Alignment:
Q  24 atacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatta 81  Q
    ||||||| |||||||||||||||||| | ||||| |||||| ||| |||| |||||||    
T  10069283 atacattaacttttgttgacctaaatatttcttaaaaatagtaccagaggaagtatta 10069340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 82
Target Start/End: Original strand, 13775831 - 13775864
Alignment:
Q  49 tttctcttataaataggaccggaggtagtattat 82  Q
    ||||||||||||||||||||||||| ||||||||    
T  13775831 tttctcttataaataggaccggagggagtattat 13775864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 73
Target Start/End: Complemental strand, 44804624 - 44804583
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagg 73  Q
    ||||||||| || |||| ||||||||||||||||||||||||    
T  44804624 acttttgttaacttaaaattctcttataaataggaccggagg 44804583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 32 - 64
Target Start/End: Complemental strand, 36089489 - 36089457
Alignment:
Q  32 acttttgttgacctaaatttctcttataaatag 64  Q
    |||||||||||||||||| ||||||||||||||    
T  36089489 acttttgttgacctaaatatctcttataaatag 36089457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482 (Bit Score: 80; Significance: 3e-37; HSPs: 2)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 12937 - 12858
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12937 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 12858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 12944 - 12993
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtatta 81  Q
    ||||||| ||||| ||| |||||||||||||||||||||||| |||||||    
T  12944 acttttgctgacccaaaattctcttataaataggaccggagggagtatta 12993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 77; Significance: 2e-35; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 49579 - 49503
Alignment:
Q  4 tagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49579 tagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtatt 49503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 49579 - 49635
Alignment:
Q  22 aaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    ||||||||  ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  49579 aaatacatcaacttttgttgacccaaaattctcttataaataggaccggagggagta 49635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1707 (Bit Score: 75; Significance: 3e-34; HSPs: 1)
Name: scaffold1707
Description:

Target: scaffold1707; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 1412 - 1334
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  1412 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggatgtagtat 1334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 74; Significance: 1e-33; HSPs: 2)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 6184 - 6261
Alignment:
Q  1 atctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6184 atctagttaaaaattcagtccacatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 6261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 6177 - 6124
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtattatttt 85  Q
    ||||||||||||| ||| || ||||||||||||||||||||| |||||||||||    
T  6177 acttttgttgacccaaaattttcttataaataggaccggagggagtattatttt 6124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0415 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 13782 - 13845
Alignment:
Q  4 tagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggac 67  Q
    |||||||||||||||| |||||| ||| | ||||||||||||||||||||||||||| ||||||    
T  13782 tagttaaaaattcagttcaaatatattaatttttgttgacctaaatttctcttataagtaggac 13845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 3 - 78
Target Start/End: Original strand, 231358 - 231433
Alignment:
Q  3 ctagttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagta 78  Q
    |||||| ||||||||||||| ||||||  ||||||||||| | || |||||||||||| ||||| |||||| ||||    
T  231358 ctagttcaaaattcagtccagatacataaacttttgttgatccaactttctcttataattaggatcggagggagta 231433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 231349 - 231301
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggaggtagtatt 80  Q
    ||||||||||||||||  ||||| |||||||||||||||||| ||||||    
T  231349 acttttgttgacctaatattctcctataaataggaccggagggagtatt 231301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 6 - 79
Target Start/End: Original strand, 43 - 115
Alignment:
Q  6 gttaaaaattcagtccaaatacattcacttttgttgacctaaatttctcttataaataggaccggaggtagtat 79  Q
    |||||||||| |||||||||||||  ||||||||||||| |  |||||| ||||||||| |||||||| |||||    
T  43 gttaaaaatttagtccaaatacatcaacttttgttgaccaatctttctc-tataaatagaaccggagggagtat 115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 73
Target Start/End: Original strand, 12437 - 12478
Alignment:
Q  32 acttttgttgacctaaatttctcttataaataggaccggagg 73  Q
    |||||| |||||| |||| |||||||||||||||||||||||    
T  12437 actttttttgaccaaaatatctcttataaataggaccggagg 12478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University