View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19367_high_3 (Length: 287)
Name: NF19367_high_3
Description: NF19367
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19367_high_3 |
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Alignment Details
Target: chr8 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 4 - 272
Target Start/End: Original strand, 42015735 - 42016003
Alignment:
| Q |
4 |
aacggttgtcttagccattacaatttgattttgacgatgaagcacatatttgtgtacactgtaacagttggtgagagtggtcctttagttgagagatgga |
103 |
Q |
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| T |
42015735 |
aacggttgtcttcgccattacaatttgattttgacgatgaagcacatatttgtgtacactgtaacagttggtgagagtggtcctttagttgagagatgga |
42015834 |
T |
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| Q |
104 |
agtggtcgaggccaaatgcacgtgtttatacattgttgattcagggtttggctgcatctttgagggtttcggatgctcttagtgtggttaaatatatatg |
203 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42015835 |
agtggtcgaggccaaatgcacgtgtttatacattgttgattcagggtttggctgcatctttgagggtttcggatgctcttagtgtggttaaatatatatg |
42015934 |
T |
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| Q |
204 |
tgaggtgggcgtctctccttctgaggaggtagggttaaataattttcttgtttctcttgagttcttcat |
272 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42015935 |
tgaggtgggcgtctctccttctgaggaggtagggttaaataattttcttgtttctcttgagttcttcat |
42016003 |
T |
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