View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19368_high_19 (Length: 446)

Name: NF19368_high_19
Description: NF19368
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19368_high_19
NF19368_high_19
[»] chr1 (90 HSPs)
chr1 (18-179)||(50883916-50884077)
chr1 (179-338)||(34756427-34756586)
chr1 (177-339)||(50005077-50005239)
chr1 (175-339)||(38277411-38277574)
chr1 (177-336)||(15034657-15034816)
chr1 (217-339)||(40264068-40264190)
chr1 (179-336)||(4038077-4038234)
chr1 (174-336)||(44410306-44410468)
chr1 (177-334)||(27804269-27804426)
chr1 (217-336)||(32572960-32573079)
chr1 (182-300)||(45565397-45565515)
chr1 (179-336)||(15034661-15034818)
chr1 (177-336)||(4038073-4038232)
chr1 (181-333)||(28745799-28745950)
chr1 (217-336)||(23536069-23536188)
chr1 (217-336)||(27935523-27935642)
chr1 (184-338)||(28745797-28745950)
chr1 (217-314)||(37214843-37214939)
chr1 (181-333)||(34756432-34756584)
chr1 (211-300)||(5474437-5474526)
chr1 (183-336)||(27804269-27804422)
chr1 (177-254)||(23536065-23536142)
chr1 (177-266)||(31166308-31166397)
chr1 (249-336)||(30190206-30190293)
chr1 (179-254)||(30190220-30190295)
chr1 (181-336)||(38277417-38277571)
chr1 (181-336)||(50005081-50005236)
chr1 (179-263)||(24273209-24273293)
chr1 (179-266)||(6470672-6470759)
chr1 (176-263)||(8224765-8224852)
chr1 (177-263)||(26501068-26501154)
chr1 (217-335)||(45565397-45565515)
chr1 (182-261)||(37036940-37037019)
chr1 (176-336)||(44410313-44410473)
chr1 (176-263)||(28632575-28632661)
chr1 (188-263)||(37448390-37448465)
chr1 (181-300)||(40264068-40264187)
chr1 (176-258)||(29446747-29446828)
chr1 (252-336)||(25889160-25889243)
chr1 (180-300)||(32572960-32573080)
chr1 (179-263)||(47165201-47165285)
chr1 (176-263)||(49659214-49659300)
chr1 (176-254)||(27935569-27935647)
chr1 (176-266)||(43622964-43623054)
chr1 (263-336)||(24273218-24273291)
chr1 (217-296)||(17502222-17502301)
chr1 (188-263)||(44570687-44570762)
chr1 (263-336)||(6470684-6470757)
chr1 (263-336)||(8224770-8224843)
chr1 (217-266)||(15245480-15245529)
chr1 (263-336)||(26501077-26501150)
chr1 (178-251)||(32287934-32288007)
chr1 (263-336)||(47165210-47165283)
chr1 (178-266)||(10166498-10166586)
chr1 (175-263)||(39887123-39887211)
chr1 (268-336)||(43622981-43623049)
chr1 (263-318)||(31195476-31195531)
chr1 (272-335)||(37036956-37037019)
chr1 (179-253)||(49216337-49216412)
chr1 (197-263)||(31195474-31195540)
chr1 (186-263)||(37447891-37447968)
chr1 (263-336)||(49659219-49659291)
chr1 (195-263)||(946929-946997)
chr1 (263-338)||(28632584-28632658)
chr1 (172-214)||(17502191-17502233)
chr1 (263-329)||(37448399-37448465)
chr1 (275-336)||(29446752-29446813)
chr1 (303-336)||(34007360-34007393)
chr1 (303-336)||(34007441-34007474)
chr1 (179-263)||(946376-946458)
chr1 (284-336)||(32287952-32288004)
chr1 (202-254)||(37214842-37214894)
chr1 (263-331)||(37447900-37447968)
chr1 (281-336)||(946378-946432)
chr1 (176-219)||(5474414-5474457)
chr1 (179-254)||(25889158-25889232)
chr1 (176-214)||(15245457-15245495)
chr1 (263-329)||(44570687-44570753)
chr1 (217-263)||(44571239-44571285)
chr1 (217-263)||(48953607-48953652)
chr1 (217-263)||(52135614-52135660)
chr1 (206-263)||(15467952-15468009)
chr1 (271-336)||(31166312-31166377)
chr1 (217-262)||(32128068-32128113)
chr1 (182-263)||(51847855-51847935)
chr1 (281-314)||(52280969-52281002)
chr1 (179-263)||(32647301-32647385)
chr1 (174-214)||(37447379-37447419)
chr1 (176-208)||(41823186-41823218)
chr1 (172-208)||(48953580-48953616)
[»] chr2 (79 HSPs)
chr2 (174-338)||(41461515-41461679)
chr2 (177-296)||(27033488-27033607)
chr2 (179-336)||(784795-784952)
chr2 (179-336)||(14365702-14365858)
chr2 (172-336)||(41461508-41461672)
chr2 (217-336)||(14537201-14537320)
chr2 (187-336)||(11716410-11716550)
chr2 (177-336)||(14365698-14365856)
chr2 (176-336)||(784790-784950)
chr2 (177-256)||(17180295-17180374)
chr2 (176-300)||(11684596-11684711)
chr2 (178-300)||(14537198-14537320)
chr2 (176-263)||(10480116-10480203)
chr2 (179-330)||(11716408-11716550)
chr2 (172-263)||(13017772-13017863)
chr2 (176-254)||(17905651-17905729)
chr2 (253-339)||(44256181-44256266)
chr2 (179-300)||(10244177-10244298)
chr2 (175-263)||(33189246-33189334)
chr2 (172-263)||(1583798-1583889)
chr2 (177-263)||(769034-769120)
chr2 (181-263)||(11532242-11532324)
chr2 (181-263)||(11793897-11793979)
chr2 (263-339)||(11793894-11793970)
chr2 (217-300)||(11824718-11824801)
chr2 (221-336)||(27033492-27033607)
chr2 (177-263)||(11141303-11141389)
chr2 (263-336)||(11532251-11532324)
chr2 (212-336)||(14954268-14954393)
chr2 (171-263)||(3092274-3092366)
chr2 (217-300)||(3345783-3345867)
chr2 (179-263)||(45094460-45094544)
chr2 (177-263)||(7228001-7228087)
chr2 (177-263)||(39630223-39630308)
chr2 (271-336)||(17180299-17180364)
chr2 (182-262)||(28740599-28740679)
chr2 (187-263)||(30698289-30698365)
chr2 (179-263)||(35047668-35047752)
chr2 (281-336)||(7228028-7228083)
chr2 (284-335)||(28740599-28740650)
chr2 (284-334)||(11684603-11684653)
chr2 (263-336)||(10480121-10480194)
chr2 (263-336)||(13017781-13017854)
chr2 (180-261)||(30751338-30751418)
chr2 (185-266)||(40026070-40026151)
chr2 (181-254)||(44256191-44256263)
chr2 (217-336)||(10244179-10244298)
chr2 (215-262)||(11595355-11595402)
chr2 (263-336)||(769038-769111)
chr2 (263-336)||(1583807-1583880)
chr2 (217-266)||(21504488-21504537)
chr2 (206-263)||(32839637-32839694)
chr2 (263-336)||(33189255-33189328)
chr2 (275-336)||(39630227-39630288)
chr2 (263-332)||(40026070-40026139)
chr2 (284-336)||(11141307-11141359)
chr2 (199-266)||(740724-740791)
chr2 (215-262)||(11607257-11607304)
chr2 (281-336)||(45094487-45094542)
chr2 (205-263)||(7167656-7167714)
chr2 (217-263)||(8736430-8736476)
chr2 (177-239)||(14954264-14954326)
chr2 (284-330)||(30698289-30698335)
chr2 (217-254)||(11684674-11684711)
chr2 (263-336)||(17905656-17905729)
chr2 (263-336)||(35047677-35047750)
chr2 (268-336)||(8735846-8735914)
chr2 (175-263)||(11606709-11606797)
chr2 (179-249)||(8735844-8735914)
chr2 (217-263)||(20935744-20935790)
chr2 (217-254)||(11824718-11824755)
chr2 (275-336)||(30751356-30751417)
chr2 (184-225)||(39477976-39478017)
chr2 (303-336)||(44205678-44205711)
chr2 (175-263)||(2274777-2274865)
chr2 (284-336)||(3092284-3092336)
chr2 (268-312)||(7167670-7167714)
chr2 (263-311)||(32839646-32839694)
chr2 (219-263)||(44255674-44255718)
[»] chr8 (83 HSPs)
chr8 (179-338)||(3853616-3853775)
chr8 (179-338)||(3858074-3858233)
chr8 (196-339)||(13404826-13404969)
chr8 (179-336)||(17110871-17111028)
chr8 (176-336)||(17110866-17111026)
chr8 (179-336)||(33902667-33902823)
chr8 (181-336)||(3853618-3853773)
chr8 (181-336)||(3858076-3858231)
chr8 (258-336)||(37268086-37268164)
chr8 (179-300)||(14799999-14800119)
chr8 (217-334)||(30435250-30435365)
chr8 (176-314)||(40046801-40046925)
chr8 (181-277)||(4156228-4156324)
chr8 (181-328)||(13404829-13404976)
chr8 (217-296)||(42739969-42740048)
chr8 (177-254)||(42711364-42711441)
chr8 (179-263)||(24044960-24045044)
chr8 (176-263)||(33377296-33377383)
chr8 (177-263)||(23011732-23011818)
chr8 (179-263)||(29257350-29257434)
chr8 (179-263)||(44889354-44889438)
chr8 (177-264)||(11744717-11744804)
chr8 (176-336)||(33902669-33902828)
chr8 (177-263)||(1088276-1088362)
chr8 (181-263)||(29482806-29482888)
chr8 (171-263)||(28324661-28324753)
chr8 (179-255)||(31807409-31807484)
chr8 (217-336)||(42711324-42711437)
chr8 (183-263)||(44346677-44346757)
chr8 (175-262)||(33986000-33986087)
chr8 (176-263)||(36103098-36103185)
chr8 (176-262)||(14236-14321)
chr8 (284-338)||(4156272-4156326)
chr8 (195-336)||(40046806-40046933)
chr8 (182-263)||(35979003-35979084)
chr8 (211-300)||(38573433-38573522)
chr8 (284-336)||(14800065-14800117)
chr8 (177-236)||(14991690-14991749)
chr8 (179-254)||(37268091-37268166)
chr8 (179-263)||(515531-515615)
chr8 (199-263)||(15186816-15186880)
chr8 (171-227)||(32626069-32626125)
chr8 (196-263)||(8049271-8049338)
chr8 (179-262)||(9982637-9982719)
chr8 (176-263)||(28190702-28190788)
chr8 (284-338)||(8689132-8689186)
chr8 (263-337)||(29482815-29482889)
chr8 (263-336)||(23011736-23011809)
chr8 (263-336)||(24044962-24045035)
chr8 (263-336)||(29257359-29257432)
chr8 (263-336)||(33377305-33377378)
chr8 (263-336)||(44889356-44889429)
chr8 (284-336)||(14991694-14991746)
chr8 (284-336)||(28324691-28324743)
chr8 (172-239)||(8689125-8689192)
chr8 (212-263)||(13144616-13144667)
chr8 (177-224)||(27322687-27322734)
chr8 (183-242)||(30435250-30435309)
chr8 (263-334)||(44346686-44346757)
chr8 (263-333)||(9982642-9982711)
chr8 (217-263)||(26520438-26520484)
chr8 (217-263)||(30444932-30444978)
chr8 (290-336)||(32626069-32626115)
chr8 (217-263)||(34008819-34008865)
chr8 (284-336)||(14241-14292)
chr8 (217-253)||(7202885-7202921)
chr8 (268-336)||(33986006-33986074)
chr8 (263-335)||(35979012-35979084)
chr8 (284-336)||(36103103-36103155)
chr8 (303-339)||(42740037-42740073)
chr8 (293-336)||(27322687-27322730)
chr8 (211-254)||(32626023-32626066)
chr8 (269-323)||(8049269-8049323)
chr8 (176-214)||(14799976-14800014)
chr8 (217-263)||(29611408-29611454)
chr8 (287-336)||(515564-515613)
chr8 (263-336)||(11744727-11744800)
chr8 (217-266)||(24510273-24510322)
chr8 (303-336)||(30435350-30435383)
chr8 (275-336)||(31807411-31807471)
chr8 (212-253)||(31980492-31980533)
chr8 (174-214)||(30444963-30445003)
chr8 (195-263)||(35404741-35404809)
[»] chr4 (85 HSPs)
chr4 (179-338)||(10127974-10128133)
chr4 (179-336)||(15660185-15660342)
chr4 (177-339)||(42844541-42844703)
chr4 (181-336)||(7352814-7352969)
chr4 (175-336)||(28845867-28846028)
chr4 (179-336)||(41498489-41498647)
chr4 (206-336)||(857266-857396)
chr4 (217-338)||(26250909-26251030)
chr4 (176-336)||(7352814-7352974)
chr4 (179-336)||(1107053-1107211)
chr4 (172-336)||(4896650-4896798)
chr4 (217-336)||(11040970-11041088)
chr4 (174-336)||(15660178-15660340)
chr4 (179-276)||(36455907-36456004)
chr4 (172-311)||(857266-857405)
chr4 (179-338)||(4896648-4896791)
chr4 (179-333)||(28845876-28846030)
chr4 (249-336)||(49111382-49111469)
chr4 (179-254)||(49111396-49111471)
chr4 (179-296)||(14982280-14982396)
chr4 (181-336)||(10127976-10128131)
chr4 (176-336)||(1107048-1107209)
chr4 (179-263)||(31473849-31473933)
chr4 (176-253)||(1112602-1112679)
chr4 (180-300)||(4441338-4441449)
chr4 (176-300)||(26250906-26251030)
chr4 (173-257)||(36456007-36456091)
chr4 (181-336)||(42844545-42844700)
chr4 (182-263)||(10633035-10633116)
chr4 (179-263)||(2125857-2125941)
chr4 (177-253)||(41498575-41498651)
chr4 (221-336)||(14982282-14982396)
chr4 (174-252)||(11040963-11041040)
chr4 (179-256)||(1112704-1112781)
chr4 (187-263)||(1539649-1539725)
chr4 (179-250)||(5715744-5715815)
chr4 (263-336)||(2125859-2125932)
chr4 (179-248)||(11348327-11348396)
chr4 (217-285)||(12914051-12914119)
chr4 (179-263)||(16516171-16516255)
chr4 (268-336)||(31473851-31473919)
chr4 (269-337)||(31742777-31742845)
chr4 (179-263)||(35470122-35470206)
chr4 (268-335)||(10633035-10633102)
chr4 (177-263)||(41139473-41139557)
chr4 (250-296)||(46724195-46724241)
chr4 (179-261)||(55266852-55266934)
chr4 (206-263)||(29091164-29091221)
chr4 (171-228)||(31742874-31742931)
chr4 (268-336)||(1112607-1112675)
chr4 (284-336)||(4441339-4441391)
chr4 (272-336)||(16516173-16516237)
chr4 (284-336)||(36455909-36455961)
chr4 (268-330)||(1539649-1539711)
chr4 (284-338)||(19461755-19461809)
chr4 (217-263)||(53760779-53760825)
chr4 (263-336)||(35470124-35470197)
chr4 (284-336)||(11348342-11348394)
chr4 (197-265)||(12169037-12169104)
chr4 (211-263)||(26534525-26534577)
chr4 (303-339)||(46724230-46724266)
chr4 (177-253)||(52493924-52493998)
chr4 (179-254)||(467887-467960)
chr4 (181-248)||(31742778-31742845)
chr4 (289-336)||(31742874-31742921)
chr4 (291-337)||(42542979-42543025)
chr4 (217-263)||(42775643-42775689)
chr4 (217-262)||(21012566-21012611)
chr4 (181-226)||(42542979-42543024)
chr4 (284-336)||(36456031-36456083)
chr4 (211-262)||(16300209-16300260)
chr4 (181-263)||(19461725-19461807)
chr4 (177-263)||(42776635-42776721)
chr4 (255-336)||(467879-467958)
chr4 (263-332)||(1112706-1112775)
chr4 (217-254)||(4441412-4441449)
chr4 (198-255)||(10354361-10354418)
chr4 (212-253)||(21012494-21012535)
chr4 (263-300)||(21012574-21012611)
chr4 (181-214)||(46243115-46243148)
chr4 (284-336)||(5715746-5715798)
chr4 (263-311)||(29091164-29091212)
chr4 (177-263)||(31947588-31947675)
chr4 (199-263)||(46242533-46242597)
chr4 (268-336)||(52493928-52493994)
[»] chr7 (78 HSPs)
chr7 (174-336)||(5644672-5644834)
chr7 (177-336)||(29065817-29065976)
chr7 (177-336)||(40110735-40110895)
chr7 (185-336)||(21635887-21636038)
chr7 (171-336)||(2057397-2057562)
chr7 (176-339)||(43955514-43955674)
chr7 (211-339)||(46069423-46069548)
chr7 (176-336)||(2057392-2057552)
chr7 (176-336)||(40110739-40110900)
chr7 (181-336)||(43955519-43955671)
chr7 (183-336)||(49052788-49052937)
chr7 (179-336)||(5644679-5644836)
chr7 (179-336)||(29065821-29065978)
chr7 (175-336)||(34388261-34388422)
chr7 (217-336)||(40854007-40854127)
chr7 (177-332)||(21635883-21636038)
chr7 (179-336)||(34388267-34388424)
chr7 (211-336)||(44915197-44915322)
chr7 (175-266)||(31632718-31632809)
chr7 (174-336)||(46481941-46482102)
chr7 (174-263)||(35776930-35777019)
chr7 (179-263)||(26162112-26162196)
chr7 (174-263)||(28539143-28539232)
chr7 (172-263)||(29639190-29639281)
chr7 (177-263)||(25189201-25189287)
chr7 (177-263)||(39342617-39342703)
chr7 (177-307)||(49052784-49052913)
chr7 (174-263)||(6498740-6498829)
chr7 (174-263)||(14603237-14603326)
chr7 (183-263)||(23455222-23455302)
chr7 (176-308)||(44915192-44915324)
chr7 (179-248)||(34398938-34399008)
chr7 (179-263)||(18789221-18789305)
chr7 (179-263)||(23548586-23548670)
chr7 (179-263)||(35455804-35455888)
chr7 (180-263)||(9784906-9784989)
chr7 (174-336)||(46481948-46482109)
chr7 (263-336)||(26162121-26162194)
chr7 (263-336)||(31632724-31632797)
chr7 (176-300)||(40854007-40854132)
chr7 (181-263)||(22391562-22391644)
chr7 (263-336)||(28539152-28539225)
chr7 (263-336)||(35776939-35777012)
chr7 (284-336)||(6498770-6498822)
chr7 (268-336)||(22391576-22391644)
chr7 (269-336)||(34398938-34399006)
chr7 (181-308)||(46069421-46069545)
chr7 (177-263)||(30524253-30524339)
chr7 (205-263)||(43791116-43791174)
chr7 (263-336)||(29639199-29639272)
chr7 (263-336)||(39342626-39342699)
chr7 (284-336)||(9784936-9784988)
chr7 (284-336)||(14603267-14603319)
chr7 (206-262)||(18789544-18789600)
chr7 (183-263)||(30629061-30629141)
chr7 (284-336)||(35455806-35455858)
chr7 (263-334)||(23455231-23455302)
chr7 (281-336)||(29195711-29195766)
chr7 (268-334)||(30629061-30629127)
chr7 (217-263)||(32650611-32650657)
chr7 (217-263)||(40495755-40495801)
chr7 (198-263)||(3905634-3905699)
chr7 (263-336)||(18789230-18789303)
chr7 (263-336)||(23548595-23548668)
chr7 (217-277)||(31913256-31913316)
chr7 (284-336)||(25189231-25189283)
chr7 (284-336)||(30524257-30524309)
chr7 (268-312)||(43791116-43791160)
chr7 (217-263)||(14790151-14790197)
chr7 (217-263)||(45984378-45984424)
chr7 (217-263)||(45988738-45988784)
chr7 (287-336)||(18926812-18926861)
chr7 (172-209)||(19865565-19865602)
chr7 (177-226)||(29195707-29195756)
chr7 (176-209)||(30080812-30080845)
chr7 (177-214)||(31913234-31913271)
chr7 (188-236)||(22351874-22351922)
chr7 (174-214)||(30587909-30587949)
[»] chr6 (36 HSPs)
chr6 (181-336)||(9763014-9763169)
chr6 (176-337)||(6919709-6919869)
chr6 (179-300)||(9285647-9285768)
chr6 (176-336)||(776082-776242)
chr6 (177-339)||(9763011-9763173)
chr6 (181-336)||(6919710-6919864)
chr6 (179-263)||(1368477-1368561)
chr6 (217-336)||(9285649-9285768)
chr6 (179-336)||(776080-776237)
chr6 (179-263)||(34244969-34245053)
chr6 (176-239)||(8574764-8574827)
chr6 (176-263)||(28918162-28918249)
chr6 (183-253)||(15299510-15299579)
chr6 (179-239)||(8574695-8574755)
chr6 (179-263)||(13487275-13487359)
chr6 (179-263)||(29889423-29889507)
chr6 (284-336)||(8574697-8574749)
chr6 (284-336)||(8574770-8574822)
chr6 (197-251)||(15299417-15299471)
chr6 (284-336)||(34244999-34245051)
chr6 (268-334)||(15299514-15299579)
chr6 (263-336)||(29889432-29889505)
chr6 (268-336)||(13487277-13487345)
chr6 (183-263)||(15832470-15832550)
chr6 (268-336)||(28918167-28918235)
chr6 (263-336)||(1368479-1368552)
chr6 (201-266)||(6358237-6358302)
chr6 (206-263)||(34364770-34364827)
chr6 (179-219)||(33733432-33733472)
chr6 (263-311)||(34364770-34364818)
chr6 (208-239)||(15299471-15299502)
chr6 (224-263)||(15616350-15616389)
chr6 (298-336)||(33733434-33733472)
chr6 (176-209)||(1195348-1195381)
chr6 (217-262)||(1195371-1195416)
chr6 (303-336)||(8475181-8475214)
[»] chr5 (91 HSPs)
chr5 (180-336)||(20523135-20523291)
chr5 (177-336)||(15373962-15374121)
chr5 (176-336)||(9764335-9764495)
chr5 (177-336)||(2316376-2316535)
chr5 (179-336)||(40809343-40809500)
chr5 (181-336)||(32389974-32390129)
chr5 (217-339)||(28828387-28828507)
chr5 (179-336)||(9764340-9764497)
chr5 (176-336)||(32470879-32471037)
chr5 (182-336)||(6634017-6634170)
chr5 (176-300)||(40643856-40643979)
chr5 (179-336)||(15373960-15374117)
chr5 (179-336)||(20523133-20523290)
chr5 (174-336)||(32389974-32390136)
chr5 (176-336)||(40809338-40809498)
chr5 (179-336)||(32470884-32471039)
chr5 (179-336)||(23091963-23092119)
chr5 (179-336)||(2316380-2316537)
chr5 (177-336)||(23091965-23092123)
chr5 (180-266)||(3563278-3563364)
chr5 (174-339)||(16515004-16515182)
chr5 (179-263)||(22766952-22767036)
chr5 (175-263)||(25935276-25935364)
chr5 (179-263)||(37722880-37722964)
chr5 (175-263)||(40090400-40090488)
chr5 (181-252)||(2721557-2721628)
chr5 (174-335)||(6634010-6634170)
chr5 (179-256)||(26281262-26281339)
chr5 (175-263)||(927298-927386)
chr5 (179-254)||(15804322-15804397)
chr5 (176-263)||(41762201-41762288)
chr5 (263-336)||(37722889-37722962)
chr5 (179-263)||(22303856-22303940)
chr5 (283-338)||(15804398-15804453)
chr5 (217-336)||(40643856-40643974)
chr5 (268-338)||(2721560-2721630)
chr5 (181-263)||(19533893-19533975)
chr5 (177-263)||(32250084-32250169)
chr5 (183-263)||(9894308-9894388)
chr5 (179-259)||(35379344-35379423)
chr5 (181-263)||(37145487-37145569)
chr5 (263-336)||(927304-927377)
chr5 (183-256)||(16515009-16515081)
chr5 (181-234)||(28828369-28828422)
chr5 (181-254)||(28828431-28828504)
chr5 (260-336)||(15804324-15804400)
chr5 (284-336)||(28828369-28828421)
chr5 (176-252)||(34982213-34982288)
chr5 (176-263)||(10314646-10314733)
chr5 (268-339)||(19533907-19533978)
chr5 (180-255)||(33245366-33245441)
chr5 (289-339)||(13243514-13243564)
chr5 (263-336)||(3563279-3563352)
chr5 (176-234)||(13243454-13243514)
chr5 (172-233)||(15804399-15804460)
chr5 (263-336)||(22766954-22767027)
chr5 (263-336)||(25935285-25935358)
chr5 (263-336)||(26281264-26281337)
chr5 (263-336)||(40090409-40090482)
chr5 (284-336)||(22303886-22303938)
chr5 (181-263)||(14834826-14834908)
chr5 (217-263)||(22305132-22305178)
chr5 (217-266)||(15270837-15270886)
chr5 (217-266)||(17542344-17542393)
chr5 (263-336)||(41762210-41762283)
chr5 (284-336)||(32250114-32250165)
chr5 (211-263)||(35111258-35111310)
chr5 (268-336)||(37145501-37145569)
chr5 (293-336)||(5658778-5658821)
chr5 (263-334)||(9894317-9894388)
chr5 (181-263)||(20320634-20320716)
chr5 (172-214)||(22305105-22305147)
chr5 (217-263)||(33146211-33146257)
chr5 (290-336)||(33245394-33245440)
chr5 (263-336)||(16515102-16515175)
chr5 (218-263)||(17492634-17492679)
chr5 (218-263)||(28490031-28490076)
chr5 (217-253)||(2550348-2550384)
chr5 (176-224)||(5658773-5658821)
chr5 (284-328)||(13243469-13243513)
chr5 (284-336)||(34982218-34982269)
chr5 (284-336)||(35379346-35379397)
chr5 (212-263)||(8255060-8255110)
chr5 (181-228)||(13243514-13243561)
chr5 (180-263)||(37090282-37090365)
chr5 (176-214)||(2550325-2550363)
chr5 (211-253)||(30519036-30519078)
chr5 (211-253)||(30559376-30559418)
chr5 (211-253)||(37241598-37241640)
chr5 (263-332)||(10314655-10314724)
chr5 (268-336)||(14834826-14834894)
[»] chr3 (86 HSPs)
chr3 (187-318)||(31070415-31070545)
chr3 (179-336)||(44692822-44692979)
chr3 (176-305)||(44436255-44436384)
chr3 (177-336)||(9129342-9129501)
chr3 (177-336)||(9137449-9137608)
chr3 (179-336)||(5415785-5415942)
chr3 (217-336)||(46429434-46429553)
chr3 (176-336)||(44692824-44692984)
chr3 (177-336)||(9129346-9129505)
chr3 (177-336)||(9137453-9137612)
chr3 (217-332)||(28092220-28092335)
chr3 (221-336)||(47284268-47284383)
chr3 (217-336)||(27251932-27252051)
chr3 (211-338)||(42130692-42130819)
chr3 (178-336)||(5415782-5415940)
chr3 (221-339)||(39215880-39215998)
chr3 (212-336)||(44436260-44436384)
chr3 (179-255)||(46672799-46672875)
chr3 (176-259)||(49457340-49457423)
chr3 (176-254)||(27251978-27252056)
chr3 (198-330)||(31070415-31070546)
chr3 (177-263)||(7302344-7302430)
chr3 (183-263)||(21307520-21307600)
chr3 (172-300)||(28092207-28092335)
chr3 (175-263)||(53129831-53129919)
chr3 (179-261)||(36397979-36398061)
chr3 (227-336)||(46672770-46672873)
chr3 (217-300)||(332012-332096)
chr3 (176-276)||(40929605-40929704)
chr3 (179-263)||(47767432-47767516)
chr3 (176-263)||(42005941-42006028)
chr3 (176-261)||(34088568-34088653)
chr3 (247-336)||(39110396-39110485)
chr3 (179-300)||(46429434-46429555)
chr3 (175-263)||(671607-671695)
chr3 (179-263)||(37054394-37054478)
chr3 (179-254)||(39110394-39110469)
chr3 (179-248)||(47284316-47284385)
chr3 (187-263)||(19475824-19475900)
chr3 (268-336)||(42005955-42006023)
chr3 (179-263)||(48947605-48947689)
chr3 (284-336)||(49457345-49457397)
chr3 (179-263)||(53470417-53470501)
chr3 (263-334)||(21307529-21307600)
chr3 (217-300)||(25655335-25655418)
chr3 (197-263)||(30766571-30766637)
chr3 (263-336)||(34088573-34088646)
chr3 (176-233)||(35279920-35279977)
chr3 (263-336)||(36397986-36398059)
chr3 (176-263)||(7976544-7976632)
chr3 (179-263)||(31189385-31189469)
chr3 (176-308)||(42130689-42130821)
chr3 (284-336)||(47767434-47767486)
chr3 (179-254)||(37321550-37321625)
chr3 (284-334)||(35279920-35279970)
chr3 (217-266)||(38506861-38506910)
chr3 (182-263)||(52527039-52527120)
chr3 (284-336)||(37054396-37054448)
chr3 (284-336)||(46001366-46001418)
chr3 (284-336)||(53470447-53470499)
chr3 (175-266)||(21730898-21730988)
chr3 (176-235)||(46001361-46001420)
chr3 (217-254)||(332012-332049)
chr3 (206-263)||(8762153-8762210)
chr3 (263-336)||(37321552-37321625)
chr3 (181-254)||(39215922-39215995)
chr3 (179-236)||(46635857-46635914)
chr3 (263-336)||(53129840-53129913)
chr3 (284-336)||(671637-671689)
chr3 (284-336)||(7302348-7302400)
chr3 (195-263)||(50168598-50168666)
chr3 (263-330)||(19475824-19475891)
chr3 (263-334)||(47336885-47336956)
chr3 (217-263)||(2104772-2104818)
chr3 (294-336)||(2732641-2732683)
chr3 (213-263)||(13176550-13176600)
chr3 (174-236)||(30767099-30767161)
chr3 (303-336)||(25655317-25655350)
chr3 (217-254)||(25655335-25655372)
chr3 (272-321)||(34936658-34936707)
chr3 (263-336)||(48947607-48947680)
chr3 (91-139)||(21264008-21264056)
chr3 (172-208)||(25655409-25655445)
chr3 (284-336)||(30767106-30767158)
chr3 (284-336)||(46635859-46635911)
chr3 (183-263)||(47336885-47336965)
[»] scaffold1562 (2 HSPs)
scaffold1562 (175-339)||(401-565)
scaffold1562 (181-336)||(407-562)
[»] scaffold1158 (2 HSPs)
scaffold1158 (175-339)||(2028-2192)
scaffold1158 (181-336)||(2031-2186)
[»] scaffold0044 (2 HSPs)
scaffold0044 (183-308)||(56304-56429)
scaffold0044 (211-334)||(56306-56429)
[»] scaffold0169 (2 HSPs)
scaffold0169 (176-263)||(4072-4159)
scaffold0169 (263-336)||(4077-4150)
[»] scaffold0048 (2 HSPs)
scaffold0048 (181-261)||(82945-83025)
scaffold0048 (263-336)||(82945-83018)
[»] scaffold0009 (4 HSPs)
scaffold0009 (179-258)||(41997-42076)
scaffold0009 (177-236)||(42080-42139)
scaffold0009 (263-336)||(41999-42072)
scaffold0009 (284-336)||(42083-42135)
[»] scaffold0318 (2 HSPs)
scaffold0318 (179-263)||(2867-2950)
scaffold0318 (275-336)||(2869-2930)
[»] scaffold0400 (2 HSPs)
scaffold0400 (180-263)||(4487-4570)
scaffold0400 (263-336)||(4496-4569)
[»] scaffold0365 (2 HSPs)
scaffold0365 (180-263)||(5131-5214)
scaffold0365 (263-336)||(5140-5213)
[»] scaffold0129 (4 HSPs)
scaffold0129 (176-262)||(19195-19280)
scaffold0129 (263-336)||(19200-19272)
scaffold0129 (181-253)||(19784-19855)
scaffold0129 (268-337)||(19788-19856)
[»] scaffold0027 (2 HSPs)
scaffold0027 (180-263)||(10887-10970)
scaffold0027 (263-336)||(10888-10961)
[»] scaffold0301 (2 HSPs)
scaffold0301 (181-263)||(7153-7235)
scaffold0301 (284-336)||(7153-7205)
[»] scaffold0240 (1 HSPs)
scaffold0240 (217-276)||(17561-17620)
[»] scaffold0337 (1 HSPs)
scaffold0337 (172-263)||(15855-15943)
[»] scaffold0065 (1 HSPs)
scaffold0065 (172-263)||(2897-2985)
[»] scaffold0002 (1 HSPs)
scaffold0002 (213-263)||(130388-130438)
[»] scaffold0014 (1 HSPs)
scaffold0014 (212-253)||(221195-221236)


Alignment Details
Target: chr1 (Bit Score: 150; Significance: 4e-79; HSPs: 90)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 18 - 179
Target Start/End: Original strand, 50883916 - 50884077
Alignment:
Q  18 gattgctttgtttgtttgatcgatcatgtctctattgacttctttatgtttgattgctcatctccgtgttgatttcttatgtttaattgatcatctccat 117  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  50883916 gattgctttgtttgtttgatcgatcatgtctctattggcttctttatgtttgattgctcatctccctattgatttcttatgtttaattgatcatctccat 50884015  T
Q  118 atttattctttagtttgattgattttctctatattgattgttctatttgaatgtttctctaa 179  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50884016 atttattctttagtttgattgattttctctatattgattgttctatttgaatgtttctctaa 50884077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 179 - 338
Target Start/End: Original strand, 34756427 - 34756586
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaat 278  Q
    |||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  34756427 agagagtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattctattgtttgaatccacctcaaaat 34756526  T
Q  279 aattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacactat 338  Q
    |||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  34756527 aattgaattccctcaaaacattatattacctcaaaatatttccccatccaaacacactat 34756586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 177 - 339
Target Start/End: Original strand, 50005077 - 50005239
Alignment:
Q  177 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaa 276  Q
    ||||||||||||||||||  ||||| ||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||    
T  50005077 taagagtgtgtttggatgacggaatattttgagagaatgtaatgttttgagcgaattcaacttctttgaggtgaattctattgtttgaatccacctcaaa 50005176  T
Q  277 ataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacactata 339  Q
    |||||| |||||||||||||||||||||| |||||||||||| | ||||||||||||||||||    
T  50005177 ataattgaattccctcaaaacattacattacctcaaaatattcctccatccaaacacactata 50005239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 175 - 339
Target Start/End: Original strand, 38277411 - 38277574
Alignment:
Q  175 tctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctca 274  Q
    |||||||||||||||||||| | |||| ||||||| |||||||||||||||| |||||||||||| ||||||||||||| |||||||| |||||||||||    
T  38277411 tctaagagtgtgtttggatgagagaatattttgagggaatgtaatgttttgaaggaattcaactactttgaggtgaattatattgtttaaatccacctca 38277510  T
Q  275 aaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacactata 339  Q
    |||||||| |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  38277511 aaataattgaattccctcaaaacattacattacctcaaaata-ttccccatccaaacacactata 38277574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 177 - 336
Target Start/End: Original strand, 15034657 - 15034816
Alignment:
Q  177 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaa 276  Q
    ||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| |||||||||    
T  15034657 taagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcacctcaaa 15034756  T
Q  277 ataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
     || || ||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  15034757 gtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacact 15034816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 217 - 339
Target Start/End: Original strand, 40264068 - 40264190
Alignment:
Q  217 aatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaata 316  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  40264068 aatgttttgagggaattcaactactttgagatgaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattacctcaaaata 40264167  T
Q  317 tttccccatccaaacacactata 339  Q
    || ||||||||||||||||||||    
T  40264168 ttcccccatccaaacacactata 40264190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 179 - 336
Target Start/End: Complemental strand, 4038234 - 4038077
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaat 278  Q
    |||||||||||||||| |||||| ||||||| ||| ||||||||||||||||||||||||| ||| |||||||||||||||||||||  ||||||||| |    
T  4038234 agagtgtgtttggatgggggaatattttgagggaaagtaatgttttgagggaattcaactactttaaggtgaattctattgtttgaactcacctcaaagt 4038135  T
Q  279 aattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    | || ||||||||||||||||||||||||||||||| ||| ||||| |||||||||||    
T  4038134 agttgaattccctcaaaacattacattccctcaaaacattcccccacccaaacacact 4038077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 174 - 336
Target Start/End: Original strand, 44410306 - 44410468
Alignment:
Q  174 ctctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctc 273  Q
    |||| ||||||| |||||||| | |||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||| |||||||||       
T  44410306 ctcttagagtgtatttggatgggagaatgttttgagggaatgtaatgttttaagcgaattcaactattttgaggtgaattctattgtctgaatccactca 44410405  T
Q  274 aaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    ||||||||| |||||||||||||| ||||||| |||||||||||| ||| |||||||||||||    
T  44410406 aaaataattgaattccctcaaaactttacattacctcaaaatattccccaatccaaacacact 44410468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 177 - 334
Target Start/End: Complemental strand, 27804426 - 27804269
Alignment:
Q  177 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaa 276  Q
    ||||||||||||||||||  |||||||||||||  |||||||||||| || |||||||||||| ||| || ||||||||||||||||||| |||||||||    
T  27804426 taagagtgtgtttggatggaggaatgttttgaggaaatgtaatgtttagaaggaattcaactactttaagttgaattctattgtttgaattcacctcaaa 27804327  T
Q  277 ataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacaca 334  Q
    ||| || ||||||||||||| ||||||||||||||||| ||| |||||||||||||||    
T  27804326 atagttgaattccctcaaaatattacattccctcaaaacattcccccatccaaacaca 27804269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 217 - 336
Target Start/End: Original strand, 32572960 - 32573079
Alignment:
Q  217 aatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaata 316  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| ||||||||||    
T  32572960 aatgttttgagggaattcaactactttgaggtgaattctattgtttgaatccacctcaaaagaattgaattccctcaaaacattacattacctcaaaata 32573059  T
Q  317 tttccccatccaaacacact 336  Q
    || |||||||||| ||||||    
T  32573060 ttcccccatccaatcacact 32573079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 182 - 300
Target Start/End: Original strand, 45565397 - 45565515
Alignment:
Q  182 gtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataat 281  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||||||||| || |    
T  45565397 gtgtgtttggatgggggaatgttttgagagaatgtaatgttttgagggaattcaactattttaaggtgaattctattgtttaaattcacctcaaagtagt 45565496  T
Q  282 taaattccctcaaaacatt 300  Q
    | |||||||||||||||||    
T  45565497 tgaattccctcaaaacatt 45565515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 179 - 336
Target Start/End: Complemental strand, 15034818 - 15034661
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaat 278  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |    | |||| ||||| ||| |    
T  15034818 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaccttaaagt 15034719  T
Q  279 aattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    | || ||||||||||||||||||||||||||||||| ||| | |||||||||||||||    
T  15034718 agttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacact 15034661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 177 - 336
Target Start/End: Original strand, 4038073 - 4038232
Alignment:
Q  177 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaa 276  Q
    ||||||||||||||| || |||||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||| |    | |||| ||||| |||    
T  4038073 taagagtgtgtttgggtgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgagttcaaacaatagaattcaccttaaa 4038172  T
Q  277 ataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
     || || ||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  4038173 gtagttgaattccctcaaaacattactttccctcaaaatattcccccatccaaacacact 4038232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 181 - 333
Target Start/End: Original strand, 28745799 - 28745950
Alignment:
Q  181 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataa 280  Q
    ||||| |||||||| |||||| ||||||| |||||||||| ||||||||||||||| |||||  |||||||||||||||||||||| ||||||||||||     
T  28745799 agtgtatttggatgggggaatattttgagggaatgtaatggtttgagggaattcaattattta-aggtgaattctattgtttgaattcacctcaaaatag 28745897  T
Q  281 ttaaattccctcaaaacattacattccctcaaaatatttccccatccaaacac 333  Q
    || ||||||||||||| |||||||||||| ||||||||  | |||||||||||    
T  28745898 ttgaattccctcaaaatattacattcccttaaaatattctctcatccaaacac 28745950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 217 - 336
Target Start/End: Complemental strand, 23536188 - 23536069
Alignment:
Q  217 aatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaata 316  Q
    ||||||||||||||||||||||| ||| ||||||||| |||||||||||| ||||||||| || || ||||||||||||||||||||||||||||||| |    
T  23536188 aatgttttgagggaattcaactactttaaggtgaattatattgtttgaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaaca 23536089  T
Q  317 tttccccatccaaacacact 336  Q
    || |||||||||||||||||    
T  23536088 ttcccccatccaaacacact 23536069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 217 - 336
Target Start/End: Original strand, 27935523 - 27935642
Alignment:
Q  217 aatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaata 316  Q
    |||||||||||  |||||||||| ||| |||||||||||||||||||||| || |||||| || || |||| ||||||||||||||||||||||||||||    
T  27935523 aatgttttgagaaaattcaactactttcaggtgaattctattgtttgaattcaactcaaagtagttgaatttcctcaaaacattacattccctcaaaata 27935622  T
Q  317 tttccccatccaaacacact 336  Q
    |||| |||||||||||||||    
T  27935623 tttctccatccaaacacact 27935642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 184 - 338
Target Start/End: Complemental strand, 28745950 - 28745797
Alignment:
Q  184 gtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataatta 283  Q
    ||||||||||| | |||| |||| || ||||||||| |||||||||||||||||||||||||||||||||| |    | |||| ||||| ||| |||||     
T  28745950 gtgtttggatgagagaatattttaagggaatgtaatattttgagggaattcaactattttgaggtgaattcaaacaatagaattcaccttaaa-taattg 28745852  T
Q  284 aattccctcaaaacattacattccctcaaaatatttccccatccaaacacactat 338  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||| |||||||    
T  28745851 aattccctcaaaccattacattccctcaaaatattcccccatccaaatacactat 28745797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 217 - 314
Target Start/End: Complemental strand, 37214939 - 37214843
Alignment:
Q  217 aatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaa 314  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||    
T  37214939 aatgttttgagggaattcaactactt-gaggtgaattctattgtttgaatccacctcaaaataattgaattctctcaaaacattacattacctcaaaa 37214843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 181 - 333
Target Start/End: Complemental strand, 34756584 - 34756432
Alignment:
Q  181 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataa 280  Q
    |||||||||||||| || ||| |||||||  ||| ||||||||||||||||||||| |||||||||||| |||| |    | |||| ||||||||| ||     
T  34756584 agtgtgtttggatggggaaatattttgaggtaatataatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtag 34756485  T
Q  281 ttaaattccctcaaaacattacattccctcaaaatatttccccatccaaacac 333  Q
    || ||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  34756484 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacac 34756432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 211 - 300
Target Start/End: Complemental strand, 5474526 - 5474437
Alignment:
Q  211 gaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacatt 300  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||| ||||| |||||||||||||||||||||||    
T  5474526 gaatgtaatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcacttcaaagtaattaaattccctcaaaacatt 5474437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 183 - 336
Target Start/End: Original strand, 27804269 - 27804422
Alignment:
Q  183 tgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataatt 282  Q
    |||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |    | |||| || || ||| || ||    
T  27804269 tgtgtttggatgggggaatgttttgagggaatgtaatattttgagggaattcaactattttgaggtgaattcaaacaatagaattcaacttaaagtagtt 27804368  T
Q  283 aaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
     |||||| || |||||||||||| |||||||| ||| | |||||||||||||||    
T  27804369 gaattccttctaaacattacatttcctcaaaacattcctccatccaaacacact 27804422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 177 - 254
Target Start/End: Original strand, 23536065 - 23536142
Alignment:
Q  177 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattc 254  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  23536065 taagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattc 23536142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 177 - 266
Target Start/End: Original strand, 31166308 - 31166397
Alignment:
Q  177 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaat 266  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||| ||| ||||||||| |||||||||||||||||||    
T  31166308 taagagtgtgtttggatgagggaatgttttgagataatgtaatgttttgatggaatgcaaatattttgagatgaattctattgtttgaat 31166397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 249 - 336
Target Start/End: Original strand, 30190206 - 30190293
Alignment:
Q  249 gaattctattgtttgaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||||||||||||||||| |||||||||||| || |||| |||||||||||||||||||||||||| ||| |||||||||||||||||    
T  30190206 gaattctattgtttgaattcacctcaaaatagttgaattacctcaaaacattacattccctcaaaacattcccccatccaaacacact 30190293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 179 - 254
Target Start/End: Complemental strand, 30190295 - 30190220
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattc 254  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  30190295 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaggtaattcaactattttgaggtgaattc 30190220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 181 - 336
Target Start/End: Complemental strand, 38277571 - 38277417
Alignment:
Q  181 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataa 280  Q
    |||||||||||||| |||||| |||||||  ||||||||||||||||||||||||| |||||||||||| |||  |    |  ||| ||||||||| ||     
T  38277571 agtgtgtttggatg-gggaatattttgaggtaatgtaatgttttgagggaattcaattattttgaggtggatttaaacaatataattcacctcaaagtag 38277473  T
Q  281 ttaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    || |||||| ||||||||||||||||||||||||||||  | ||||||||||||||    
T  38277472 ttgaattccttcaaaacattacattccctcaaaatattctctcatccaaacacact 38277417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 181 - 336
Target Start/End: Complemental strand, 50005236 - 50005081
Alignment:
Q  181 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataa 280  Q
    ||||||||||||||  ||||| |||||||  ||||||||||||||||||||||||| |||||||||||| |||| |    | |||| |||||||||  |     
T  50005236 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagaag 50005137  T
Q  281 ttaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    || ||||| ||||||||||||||||| ||||||||||| |  ||||||||||||||    
T  50005136 ttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaacacact 50005081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 179 - 263
Target Start/End: Complemental strand, 24273293 - 24273209
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||| || |||||||||||||| ||||||||    
T  24273293 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtgaattccattgtttg 24273209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 179 - 266
Target Start/End: Complemental strand, 6470759 - 6470672
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaat 266  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |  ||||||||| |||| |||||||||||    
T  6470759 agagtgtgtttggatggcggaatgttttgagagaatgtaatgttttgagggaattcaaattctttgaggtggattccattgtttgaat 6470672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 176 - 263
Target Start/End: Original strand, 8224765 - 8224852
Alignment:
Q  176 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| || || ||||| |||||||| ||||||||    
T  8224765 ctaagagtgtgtttggatgagggaatgttttgagggaatgtaatgttttgagggaattgaaatactttgatgtgaattccattgtttg 8224852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 177 - 263
Target Start/End: Complemental strand, 26501154 - 26501068
Alignment:
Q  177 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    ||||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||| || ||||| |||||||| ||||||||    
T  26501154 taagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaaatactttgatgtgaattccattgtttg 26501068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 217 - 335
Target Start/End: Complemental strand, 45565515 - 45565397
Alignment:
Q  217 aatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaata 316  Q
    ||||||||||||||||||||||| |||||||||||||  |    | |||| ||||| |||||| || ||||||||||||||||||||||| ||||||| |    
T  45565515 aatgttttgagggaattcaactactttgaggtgaatttaaacaatagaattcaccttaaaatagttgaattccctcaaaacattacattctctcaaaaca 45565416  T
Q  317 tttccccatccaaacacac 335  Q
    || ||||||||||||||||    
T  45565415 ttcccccatccaaacacac 45565397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 182 - 261
Target Start/End: Complemental strand, 37037019 - 37036940
Alignment:
Q  182 gtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtt 261  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||| || ||||| ||||||    
T  37037019 gtgtgtttggatgagggaatgttttgagtgaatgtaatgttttgagggaattcaaatattttgatgtaaattccattgtt 37036940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 176 - 336
Target Start/End: Complemental strand, 44410473 - 44410313
Alignment:
Q  176 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaa 275  Q
    ||||||||||||||||||  |||||| |||||||  ||||||| ||||||||||||||||| ||||||   ||| ||||      | |||| ||||||||    
T  44410473 ctaagagtgtgtttggattggggaatattttgaggtaatgtaaagttttgagggaattcaattatttttgagtggattcagacaatagaattcacctcaa 44410374  T
Q  276 aataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||| || ||||| || |||||||||||||||||||||| |||  |||||||||| |||||    
T  44410373 aatagttgaattcgcttaaaacattacattccctcaaaacattctcccatccaaatacact 44410313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 176 - 263
Target Start/End: Complemental strand, 28632661 - 28632575
Alignment:
Q  176 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||| |||||||||||||| |||||||||| ||| ||||||||||||||||| |||||||| || |||||||||||||| ||||||||    
T  28632661 ctaatagtgtgtttggatgagggaatgtttggagggaatgtaatgttttgagagaattcaa-tactttgaggtgaattccattgtttg 28632575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 188 - 263
Target Start/End: Complemental strand, 37448465 - 37448390
Alignment:
Q  188 ttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| || || ||||| |||||||| ||||||||    
T  37448465 ttggatgagggaatgttttgagagaatgtaatgttttgagggaatttaaatactttgatgtgaattccattgtttg 37448390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 181 - 300
Target Start/End: Complemental strand, 40264187 - 40264068
Alignment:
Q  181 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataa 280  Q
    |||||||||||||| |||||| |||||||  ||||||||||||||||||||||||| |||||||||||| |||| |    | |||| || |||||| ||     
T  40264187 agtgtgtttggatgggggaatattttgaggtaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcatctcaaagtag 40264088  T
Q  281 ttaaattccctcaaaacatt 300  Q
    || |||||||||||||||||    
T  40264087 ttgaattccctcaaaacatt 40264068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 176 - 258
Target Start/End: Original strand, 29446747 - 29446828
Alignment:
Q  176 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctatt 258  Q
    ||||||||||||||| | | |||||||||||||  ||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  29446747 ctaagagtgtgtttgaacgggggaatgttttgaaggaatgtaatgttttgagggaattcaacta-tttaaggtgaattctatt 29446828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 252 - 336
Target Start/End: Complemental strand, 25889243 - 25889160
Alignment:
Q  252 ttctattgtttgaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||||| ||| |||||||||||| || ||||| || |||||    
T  25889243 ttctattgtttgaatccacctcaaaataattgaattccttcaaaacatta-attacctcaaaatattccctcatcccaatacact 25889160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 180 - 300
Target Start/End: Complemental strand, 32573080 - 32572960
Alignment:
Q  180 gagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaata 279  Q
    ||||||| ||||||| |||||| |||||||  ||||||||||||||||||||||||| | |||||||||| |||| |    | |||| ||||||||| ||    
T  32573080 gagtgtgattggatgggggaatattttgaggtaatgtaatgttttgagggaattcaattcttttgaggtggattcaaacaatagaattcacctcaaagta 32572981  T
Q  280 attaaattccctcaaaacatt 300  Q
     || |||||||||||||||||    
T  32572980 gttgaattccctcaaaacatt 32572960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 179 - 263
Target Start/End: Complemental strand, 47165285 - 47165201
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    ||||||||||||||||  | |||||||||||  ||||||||||||||||||||||||| || ||| |||||||||| ||||||||    
T  47165285 agagtgtgtttggatggagaaatgttttgaggaaatgtaatgttttgagggaattcaaatactttaaggtgaattccattgtttg 47165201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 176 - 263
Target Start/End: Original strand, 49659214 - 49659300
Alignment:
Q  176 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    ||||||||||||||||||| |||||||| ||||| ||||||||||||  ||||||||| || || |||||||||||||| ||||||||    
T  49659214 ctaagagtgtgtttggatg-gggaatgtattgagggaatgtaatgttacgagggaatttaaatactttgaggtgaattccattgtttg 49659300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 176 - 254
Target Start/End: Complemental strand, 27935647 - 27935569
Alignment:
Q  176 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattc 254  Q
    |||||||||||||||||||  | ||| ||||||| |||||||||||||||||| |||||||||| |||||| |||||||    
T  27935647 ctaagagtgtgtttggatggagaaatattttgagggaatgtaatgttttgaggaaattcaactactttgagttgaattc 27935569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 176 - 266
Target Start/End: Complemental strand, 43623054 - 43622964
Alignment:
Q  176 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaat 266  Q
    ||||||||||||||||||| |||||||||||||  |||||||||||||||||  |||| || || |||||||||||||  ||| |||||||    
T  43623054 ctaagagtgtgtttggatgggggaatgttttgatggaatgtaatgttttgagaaaatttaaatactttgaggtgaatttcattatttgaat 43622964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 263 - 336
Target Start/End: Original strand, 24273218 - 24273291
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||| ||||||||| || || |||||||||| |||||||||||||||||||| ||| |||||||||||||||||    
T  24273218 gaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacacact 24273291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 217 - 296
Target Start/End: Complemental strand, 17502301 - 17502222
Alignment:
Q  217 aatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaa 296  Q
    ||||||||||||||||||||||| ||| || ||||||||||| ||||||| ||||||||| || || ||||| |||||||    
T  17502301 aatgttttgagggaattcaactactttaagttgaattctattatttgaattcacctcaaagtagttgaattctctcaaaa 17502222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 188 - 263
Target Start/End: Original strand, 44570687 - 44570762
Alignment:
Q  188 ttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    ||||||| | |||||||||||| |||||||||||||||| ||||||||| ||  ||||||||||||| ||||||||    
T  44570687 ttggatgggagaatgttttgagggaatgtaatgttttgaaggaattcaaataccttgaggtgaattccattgtttg 44570762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 263 - 336
Target Start/End: Original strand, 6470684 - 6470757
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    ||||||||||||||  | || ||||||||||||||||||||||| ||||||| ||| | |||||||||||||||    
T  6470684 gaatccacctcaaagaatttgaattccctcaaaacattacattctctcaaaacattccgccatccaaacacact 6470757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 263 - 336
Target Start/End: Complemental strand, 8224843 - 8224770
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||| ||| ||||| || || ||||||||||||||||||||||||||||||| ||| || ||||||||||||||    
T  8224843 gaattcacatcaaagtatttcaattccctcaaaacattacattccctcaaaacattccctcatccaaacacact 8224770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 217 - 266
Target Start/End: Original strand, 15245480 - 15245529
Alignment:
Q  217 aatgttttgagggaattcaactattttgaggtgaattctattgtttgaat 266  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  15245480 aatgttttgagggaattcaactactttaaggtgaattctattgtttgaat 15245529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 263 - 336
Target Start/End: Original strand, 26501077 - 26501150
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||| ||| ||||| || || ||||||||||||||||||||||||||||||| ||| | |||||||||||||||    
T  26501077 gaattcacatcaaagtatttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacact 26501150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 178 - 251
Target Start/End: Complemental strand, 32288007 - 32287934
Alignment:
Q  178 aagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaa 251  Q
    |||||||||||||||||  |||| |||||||| |||||||||||||||||| ||||||| || ||||| |||||    
T  32288007 aagagtgtgtttggatggaggaaagttttgagggaatgtaatgttttgaggaaattcaaatactttgaagtgaa 32287934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 263 - 336
Target Start/End: Original strand, 47165210 - 47165283
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||| ||||| ||| || || |||||||||||||||||||||| |||||||| ||||| |||||||||||||||    
T  47165210 gaattcaccttaaagtatttgaattccctcaaaacattacatttcctcaaaacatttctccatccaaacacact 47165283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 10166498 - 10166586
Alignment:
Q  178 aagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaat 266  Q
    ||||||||||||||||| | |||||||||| |  ||||||||||||||| |||| |||| ||| || |||||||||  |||||||||||    
T  10166498 aagagtgtgtttggatgagagaatgttttgtggtaatgtaatgttttgaaggaactcaaatatatttaggtgaatttcattgtttgaat 10166586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 175 - 263
Target Start/End: Original strand, 39887123 - 39887211
Alignment:
Q  175 tctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    ||||||||||||||| |||| ||||||||||| || |||| | ||||||||| | ||||||| || ||||| |||||||| ||||||||    
T  39887123 tctaagagtgtgtttagatgagggaatgttttaagggaatatgatgttttgaagaaattcaaatactttgatgtgaattccattgtttg 39887211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 268 - 336
Target Start/End: Original strand, 43622981 - 43623049
Alignment:
Q  268 cacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    ||||||||| || |||||||  |||||||||||||||||| |||||| ||| |||||||||||||||||    
T  43622981 cacctcaaagtatttaaattttctcaaaacattacattccatcaaaacattcccccatccaaacacact 43623049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 263 - 318
Target Start/End: Complemental strand, 31195531 - 31195476
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatt 318  Q
    |||| |||||||||||| ||||||| ||||| ||||||||||||||||||||||||    
T  31195531 gaattcacctcaaaatatttaaatttcctcagaacattacattccctcaaaatatt 31195476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 272 - 335
Target Start/End: Original strand, 37036956 - 37037019
Alignment:
Q  272 tcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacac 335  Q
    |||||||| || ||||||||||||||||||||||| ||||||| ||| || |||||||||||||    
T  37036956 tcaaaatatttgaattccctcaaaacattacattcactcaaaacattccctcatccaaacacac 37037019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 179 - 253
Target Start/End: Complemental strand, 49216412 - 49216337
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgt-aatgttttgagggaattcaactattttgaggtgaatt 253  Q
    ||||||||||||||||||| |||||||||| |||| || ||||||| |||||||||||| || |||||||| ||||    
T  49216412 agagtgtgtttggatgtggaaatgttttgaaagaacgtaaatgtttcgagggaattcaaatactttgaggtaaatt 49216337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 197 - 263
Target Start/End: Original strand, 31195474 - 31195540
Alignment:
Q  197 ggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    ||||| ||||||| |||||||||||| ||||| |||| || ||||||||||||||||| ||||||||    
T  31195474 ggaatattttgagggaatgtaatgttctgaggaaatttaaatattttgaggtgaattccattgtttg 31195540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 186 - 263
Target Start/End: Complemental strand, 37447968 - 37447891
Alignment:
Q  186 gtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    ||||||||  |||||| ||| ||| |||||||||||||||| ||||||||| ||  ||||||||||||| ||||||||    
T  37447968 gtttggataggggaatatttggagggaatgtaatgttttgaaggaattcaaataccttgaggtgaattccattgtttg 37447891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 263 - 336
Target Start/End: Complemental strand, 49659291 - 49659219
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||| ||||||||| || ||||||||||||  |||||||||||||||||| | | |||||||||||||||||||    
T  49659291 gaattcacctcaaagtatttaaattccctcgtaacattacattccctcaataca-ttccccatccaaacacact 49659219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 195 - 263
Target Start/End: Original strand, 946929 - 946997
Alignment:
Q  195 tgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    ||||||||||||||| ||||||| | |||||||| ||||||| || | |||||||||||| ||||||||    
T  946929 tgggaatgttttgagggaatgtattattttgaggaaattcaaatactatgaggtgaattccattgtttg 946997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 263 - 338
Target Start/End: Original strand, 28632584 - 28632658
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacactat 338  Q
    |||| ||||||||| || || ||||| ||||||||||||||||||||| ||| ||| || ||||||||||||||||    
T  28632584 gaattcacctcaaagta-ttgaattctctcaaaacattacattccctccaaacattccctcatccaaacacactat 28632658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 172 - 214
Target Start/End: Original strand, 17502191 - 17502233
Alignment:
Q  172 ttctctaagagtgtgtttggatgtgggaatgttttgagagaat 214  Q
    ||||||||||||||||||||||| |||||| ||||||||||||    
T  17502191 ttctctaagagtgtgtttggatgagggaatattttgagagaat 17502233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 263 - 329
Target Start/End: Original strand, 37448399 - 37448465
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaa 329  Q
    |||| ||| ||||| || |||||||||||||||||||||||||| ||||||| ||| || |||||||    
T  37448399 gaattcacatcaaagtatttaaattccctcaaaacattacattctctcaaaacattccctcatccaa 37448465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 275 - 336
Target Start/End: Complemental strand, 29446813 - 29446752
Alignment:
Q  275 aaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    ||||| || |||||||||||||||||||||||| |||||| ||| |||| | ||||||||||    
T  29446813 aaatagttgaattccctcaaaacattacattccttcaaaacattcccccgttcaaacacact 29446752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 34007393 - 34007360
Alignment:
Q  303 attccctcaaaatatttccccatccaaacacact 336  Q
    ||||||||||||||||||||||||||||||||||    
T  34007393 attccctcaaaatatttccccatccaaacacact 34007360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 303 - 336
Target Start/End: Original strand, 34007441 - 34007474
Alignment:
Q  303 attccctcaaaatatttccccatccaaacacact 336  Q
    ||||||||||||||||||||||||||||||||||    
T  34007441 attccctcaaaatatttccccatccaaacacact 34007474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 179 - 263
Target Start/End: Original strand, 946376 - 946458
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||||||||||| |  |||| |||||| ||||||| ||||||||||||||| || || |||| | ||||||||||||||||    
T  946376 agagtgtgtttggatgaga-aatgctttgagggaatgtattgttttgagggaatttaaatactttg-gatgaattctattgtttg 946458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 284 - 336
Target Start/End: Original strand, 32287952 - 32288004
Alignment:
Q  284 aattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||| ||||||||||||||||||||||||||  || | |||||||||||||||    
T  32287952 aatttcctcaaaacattacattccctcaaaactttcctccatccaaacacact 32288004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 202 - 254
Target Start/End: Original strand, 37214842 - 37214894
Alignment:
Q  202 gttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattc 254  Q
    ||||||||  |||||||||||||||| |||||||| |||||||||||| ||||    
T  37214842 gttttgaggtaatgtaatgttttgagagaattcaattattttgaggtggattc 37214894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 263 - 331
Target Start/End: Original strand, 37447900 - 37447968
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaac 331  Q
    |||| ||||||||  || || |||||| |||||||||||||||||||| ||||||| ||| ||||||||    
T  37447900 gaattcacctcaaggtatttgaattccttcaaaacattacattccctccaaatattcccctatccaaac 37447968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 281 - 336
Target Start/End: Complemental strand, 946432 - 946378
Alignment:
Q  281 ttaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||||||||||||||||| ||||||||||||||  |||| | ||||||||||||||    
T  946432 ttaaattccctcaaaacaatacattccctcaaagcattt-ctcatccaaacacact 946378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 219
Target Start/End: Original strand, 5474414 - 5474457
Alignment:
Q  176 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaat 219  Q
    ||||||||||||||||||| |||||||||||||| |||| ||||    
T  5474414 ctaagagtgtgtttggatgggggaatgttttgagggaatttaat 5474457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 179 - 254
Target Start/End: Original strand, 25889158 - 25889232
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattc 254  Q
    ||||||| || ||||| |||||| |||||||  ||| ||||||||||| ||||||||| |||||||||||| ||||    
T  25889158 agagtgtattgggatgagggaatattttgaggtaat-taatgttttgaaggaattcaattattttgaggtggattc 25889232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 214
Target Start/End: Original strand, 15245457 - 15245495
Alignment:
Q  176 ctaagagtgtgtttggatgtgggaatgttttgagagaat 214  Q
    ||||||||||||||||||| |||||||||||||| ||||    
T  15245457 ctaagagtgtgtttggatgggggaatgttttgagggaat 15245495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 329
Target Start/End: Complemental strand, 44570753 - 44570687
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaa 329  Q
    |||| ||||||||  || || |||||| |||||||||||||||||||||||| |||  |||||||||    
T  44570753 gaattcacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattctcccatccaa 44570687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 263
Target Start/End: Original strand, 44571239 - 44571285
Alignment:
Q  217 aatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||||||||||||||| || ||||| |||||||| ||||||||    
T  44571239 aatgttttgagggaattcaaatactttgaagtgaattccattgtttg 44571285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 263
Target Start/End: Original strand, 48953607 - 48953652
Alignment:
Q  217 aatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||||| ||||||||| ||||| ||||||||||||||||||||    
T  48953607 aatgttttgaaggaattcaaatattt-gaggtgaattctattgtttg 48953652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 263
Target Start/End: Complemental strand, 52135660 - 52135614
Alignment:
Q  217 aatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||||||||||||||| |||||| |||| |||| |||||||||    
T  52135660 aatgttttgagggaattcaaatatttttaggtaaattttattgtttg 52135614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 263
Target Start/End: Complemental strand, 15468009 - 15467952
Alignment:
Q  206 tgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||| ||||||| |||||| ||||||||||| || |||| ||||||||| ||||||||    
T  15468009 tgagggaatgtattgttttaagggaattcaaatactttggggtgaattccattgtttg 15467952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 336
Target Start/End: Complemental strand, 31166377 - 31166312
Alignment:
Q  271 ctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    ||||||||| ||  ||||| |||||||||||||||  ||||||| ||| || ||||||||||||||    
T  31166377 ctcaaaatatttgcattccatcaaaacattacattatctcaaaacattccctcatccaaacacact 31166312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 262
Target Start/End: Original strand, 32128068 - 32128113
Alignment:
Q  217 aatgttttgagggaattcaactattttgaggtgaattctattgttt 262  Q
    |||||||||||||||||||| || |||| ||||||||| |||||||    
T  32128068 aatgttttgagggaattcaaatactttgtggtgaattccattgttt 32128113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 263
Target Start/End: Original strand, 51847855 - 51847935
Alignment:
Q  182 gtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||||||||  |||||||||||||  ||||||||||||| | | ||||||| || ||| |||||||||| || |||||    
T  51847855 gtgtgtttggatggaggaatgttttgaggtaatgtaatgttttaaagaaattcaaatacttt-aggtgaattccatcgtttg 51847935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 281 - 314
Target Start/End: Original strand, 52280969 - 52281002
Alignment:
Q  281 ttaaattccctcaaaacattacattccctcaaaa 314  Q
    |||||||||||||||||||||| |||||||||||    
T  52280969 ttaaattccctcaaaacattactttccctcaaaa 52281002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 179 - 263
Target Start/End: Original strand, 32647301 - 32647385
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    ||||||| |||||| |  ||||||||||||   |||||| |||||||||| ||||||| || |||| ||||||| | ||||||||    
T  32647301 agagtgtatttggacggaggaatgttttgaagaaatgtattgttttgaggaaattcaaatactttggggtgaataccattgtttg 32647385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 214
Target Start/End: Complemental strand, 37447419 - 37447379
Alignment:
Q  174 ctctaagagtgtgtttggatgtgggaatgttttgagagaat 214  Q
    ||||||||| ||||||||||  |||||||||||||||||||    
T  37447419 ctctaagagcgtgtttggataggggaatgttttgagagaat 37447379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 41823218 - 41823186
Alignment:
Q  176 ctaagagtgtgtttggatgtgggaatgttttga 208  Q
    ||||||||||||||||||| |||||||||||||    
T  41823218 ctaagagtgtgtttggatgggggaatgttttga 41823186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 208
Target Start/End: Original strand, 48953580 - 48953616
Alignment:
Q  172 ttctctaagagtgtgtttggatgtgggaatgttttga 208  Q
    |||||| |||||||||||||||| |||||||||||||    
T  48953580 ttctcttagagtgtgtttggatgggggaatgttttga 48953616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 149; Significance: 2e-78; HSPs: 79)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 174 - 338
Target Start/End: Complemental strand, 41461679 - 41461515
Alignment:
Q  174 ctctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctc 273  Q
    |||| |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41461679 ctcttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctc 41461580  T
Q  274 aaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacactat 338  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  41461579 aaaataattaaattccctcaaaacattacattacctcaaaatatttccccatccaaacacactat 41461515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 177 - 296
Target Start/End: Original strand, 27033488 - 27033607
Alignment:
Q  177 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaa 276  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  27033488 taagagtgtgtttggatgggggaatgttttgagagaatgtaatgttttgagggaattcaactactttgaggtgaattctattgtttgaatccacctcaaa 27033587  T
Q  277 ataattaaattccctcaaaa 296  Q
    | |||| |||||||||||||    
T  27033588 agaattgaattccctcaaaa 27033607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 179 - 336
Target Start/End: Complemental strand, 784952 - 784795
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaat 278  Q
    |||||||||||||||| |||||| ||||||  ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| || |||||| |    
T  784952 agagtgtgtttggatgggggaatattttgatggaatgtaatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcaactcaaagt 784853  T
Q  279 aattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    | ||||||||| |||||||||||||||||||||||| ||||  |||||||||||||||    
T  784852 agttaaattccttcaaaacattacattccctcaaaacatttttccatccaaacacact 784795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 179 - 336
Target Start/End: Complemental strand, 14365858 - 14365702
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgttt-gaatccacctcaaaa 277  Q
    ||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||||| ||||  |||||||||||||||| |||| |||||||||     
T  14365858 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaactactttg--gtgaattctattgttttgaattcacctcaaag 14365761  T
Q  278 taattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    || || ||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  14365760 tagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacact 14365702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 172 - 336
Target Start/End: Original strand, 41461508 - 41461672
Alignment:
Q  172 ttctctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacc 271  Q
    |||||||| |||||||||||||| || ||| |||||||  |||||||||||||||||||||| || |||||||||||| |||| |    | |||| ||||    
T  41461508 ttctctaatagtgtgtttggatggggaaatattttgaggtaatgtaatgttttgagggaatttaattattttgaggtggattcaaacaatagaattcacc 41461607  T
Q  272 tcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||||||| || ||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  41461608 tcaaaatagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacact 41461672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 217 - 336
Target Start/End: Complemental strand, 14537320 - 14537201
Alignment:
Q  217 aatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaata 316  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||||||| || || |||| |||||||||||||||||||||||||| |    
T  14537320 aatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcacctcaaagtagttgaattacctcaaaacattacattccctcaaaaca 14537221  T
Q  317 tttccccatccaaacacact 336  Q
    || |||||||||||||||||    
T  14537220 ttcccccatccaaacacact 14537201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 187 - 336
Target Start/End: Complemental strand, 11716550 - 11716410
Alignment:
Q  187 tttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaat 286  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||         ||||||||||||||||||||| ||||||||| || || |||    
T  11716550 tttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaa---------ggtgaattctattgtttgaattcacctcaaagtagttgaat 11716460  T
Q  287 tccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||||||||||||||||||||||||||| |||   |||||||||||||||    
T  11716459 tccctcaaaacattacattccctcaaaacattcttccatccaaacacact 11716410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 177 - 336
Target Start/End: Original strand, 14365698 - 14365856
Alignment:
Q  177 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattc-tattgtttgaatccacctcaa 275  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||  |    | |||| |||  |||    
T  14365698 taagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattcaaaacaatagaattcac--caa 14365795  T
Q  276 aataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    | || || ||||||||||||||||||||||||||||||| ||| | |||||||||||||||    
T  14365796 agtagttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacact 14365856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 176 - 336
Target Start/End: Original strand, 784790 - 784950
Alignment:
Q  176 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaa 275  Q
    |||||||||||||||||||    ||||||||||| |||||||||||||||| |||||| ||||| |||||| ||||||| |    | |||| ||||| ||    
T  784790 ctaagagtgtgtttggatggaaaaatgttttgagggaatgtaatgttttgaaggaatttaactactttgagttgaattcaaacaatagaattcaccttaa 784889  T
Q  276 aataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    | || || |||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  784890 agtagttgaattccctcaaaacattacattccatcaaaatattcccccatccaaacacact 784950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 177 - 256
Target Start/End: Original strand, 17180295 - 17180374
Alignment:
Q  177 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattcta 256  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  17180295 taagagtgtgtttggatgagggaatgttttgagggaatgtaatgttttgagggaattcaactattttgagatgaattcta 17180374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 176 - 300
Target Start/End: Original strand, 11684596 - 11684711
Alignment:
Q  176 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaa 275  Q
    |||||| |||||||||||| |||||||||||||| |||||||||||||||||||||||||         |||||||||||||||||||||| ||||||||    
T  11684596 ctaagaatgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattca---------aggtgaattctattgtttgaattcacctcaa 11684686  T
Q  276 aataattaaattccctcaaaacatt 300  Q
    | || || |||||||||||||||||    
T  11684687 agtagttgaattccctcaaaacatt 11684711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 178 - 300
Target Start/End: Original strand, 14537198 - 14537320
Alignment:
Q  178 aagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaa 277  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||| |    | |||| ||||| |||     
T  14537198 aagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaggtaattcaactactttgaggtgaattcaaacaatagaattcaccttaaag 14537297  T
Q  278 taattaaattccctcaaaacatt 300  Q
    || || |||||||||||||||||    
T  14537298 tagttgaattccctcaaaacatt 14537320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 176 - 263
Target Start/End: Original strand, 10480116 - 10480203
Alignment:
Q  176 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||  |||||||||||| || |||||||||||||| ||||||||    
T  10480116 ctaagagtgtgtttggatgggggaatgttttgagggaatgtaatgttacgagggaattcaaatactttgaggtgaattccattgtttg 10480203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 179 - 330
Target Start/End: Original strand, 11716408 - 11716550
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaat 278  Q
    ||||||||||||||||   |||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |    | |||| ||||           
T  11716408 agagtgtgtttggatggaagaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcacc------- 11716500  T
Q  279 aattaaattccctcaaaacattacattccctcaaaatatttccccatccaaa 330  Q
      || ||||||||||||||||||||||||||||||| ||| |||||||||||    
T  11716501 --ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaa 11716550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 172 - 263
Target Start/End: Original strand, 13017772 - 13017863
Alignment:
Q  172 ttctctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||| ||||||||||||||||||| ||||||||||| ||||||||| |||| ||||||||||| || |||||||||||||| ||||||||    
T  13017772 ttctcttagagtgtgtttggatgtggaaatgttttgagggaatgtaatattttaagggaattcaaatactttgaggtgaattccattgtttg 13017863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 176 - 254
Target Start/End: Original strand, 17905651 - 17905729
Alignment:
Q  176 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattc 254  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||| | ||||||||| |||||||||||||||||    
T  17905651 ctaagagtgtgttaggatgagggaatgttttgagagaatgtaatgttttaaaggaattcaaatattttgaggtgaattc 17905729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 253 - 339
Target Start/End: Original strand, 44256181 - 44256266
Alignment:
Q  253 tctattgtttgaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacactata 339  Q
    |||||||||||||| ||||||||||||||  |||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||    
T  44256181 tctattgtttgaattcacctcaaaataatcgaattccctcaaaacattacattacctc-aaatattcccccatccaaacacactata 44256266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 179 - 300
Target Start/End: Original strand, 10244177 - 10244298
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaat 278  Q
    |||||||||||||||| | |||| || |||| ||| ||||||||||||||||||||||||| ||  ||||||||| |||||||||||  ||||||||| |    
T  10244177 agagtgtgtttggatgggagaatattctgagggaaagtaatgttttgagggaattcaactacttcaaggtgaattttattgtttgaactcacctcaaagt 10244276  T
Q  279 aattaaattccctcaaaacatt 300  Q
    | || |||||||| ||||||||    
T  10244277 agttgaattcccttaaaacatt 10244298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 175 - 263
Target Start/End: Complemental strand, 33189334 - 33189246
Alignment:
Q  175 tctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||||||||||||||| |||||||||||||| ||||||| |||||| ||||||||||| || |||| ||||||||| ||||||||    
T  33189334 tctaagagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttggggtgaattccattgtttg 33189246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 172 - 263
Target Start/End: Complemental strand, 1583889 - 1583798
Alignment:
Q  172 ttctctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||| |||||||||||||||| |||||||||||||| ||||||| |||||| ||||||||||| || |||| ||||||||| ||||||||    
T  1583889 ttctcttagagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttggggtgaattccattgtttg 1583798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 177 - 263
Target Start/End: Original strand, 769034 - 769120
Alignment:
Q  177 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||||||||||||| |||||||||||||| ||||||| |||||| ||||||||||| || |||| ||||||||| ||||||||    
T  769034 taagagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttggggtgaattccattgtttg 769120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 181 - 263
Target Start/End: Complemental strand, 11532324 - 11532242
Alignment:
Q  181 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||||||||| |||||| ||| ||| |||||||||||||||||||||||||| || |||||||||||||| ||||||||    
T  11532324 agtgtgtttggatgggggaatatttggagggaatgtaatgttttgagggaattcaaatactttgaggtgaattccattgtttg 11532242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 181 - 263
Target Start/End: Original strand, 11793897 - 11793979
Alignment:
Q  181 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||||||||| |||||| ||||||| |||||||||||| ||||||||||||| || |||||||||||||| ||||||||    
T  11793897 agtgtgtttggatgggggaatattttgagggaatgtaatgttatgagggaattcaaatactttgaggtgaattccattgtttg 11793979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 263 - 339
Target Start/End: Complemental strand, 11793970 - 11793894
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacactata 339  Q
    |||| ||||||||| || || |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  11793970 gaattcacctcaaagtatttgaattccctcataacattacattccctcaaaatattcccccatccaaacacactata 11793894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 217 - 300
Target Start/End: Complemental strand, 11824801 - 11824718
Alignment:
Q  217 aatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacatt 300  Q
    ||||||||||||||||||||||| ||| ||||||||| |||||||||||| || |||||| || || |||||||||||||||||    
T  11824801 aatgttttgagggaattcaactactttaaggtgaattatattgtttgaattcatctcaaagtagttgaattccctcaaaacatt 11824718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 221 - 336
Target Start/End: Complemental strand, 27033607 - 27033492
Alignment:
Q  221 ttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttc 320  Q
    |||||||||||||||| | |||||||||| |||| |    | |||| ||||||||| || || ||||||||||||||||||||||| ||||||| ||| |    
T  27033607 ttttgagggaattcaattcttttgaggtggattcaaacaatagaattcacctcaaagtagttgaattccctcaaaacattacattctctcaaaacattcc 27033508  T
Q  321 cccatccaaacacact 336  Q
    ||||||||||||||||    
T  27033507 cccatccaaacacact 27033492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 177 - 263
Target Start/End: Original strand, 11141303 - 11141389
Alignment:
Q  177 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||||||||||||| |||||||||||||| ||||||| |||||| ||||||||||| || |||| ||||||||  ||||||||    
T  11141303 taagagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttggggtgaattacattgtttg 11141389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 263 - 336
Target Start/End: Original strand, 11532251 - 11532324
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||| ||||||||| || || ||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  11532251 gaattcacctcaaagtatttgaattccctcaaaacattacattccctccaaatattcccccatccaaacacact 11532324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 212 - 336
Target Start/End: Complemental strand, 14954393 - 14954268
Alignment:
Q  212 aatgtaatgttttgagggaattcaactattttgaggtgaattctattg-tttgaatccacctcaaaataattaaattccctcaaaacattacattccctc 310  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||  || | ||| || || ||||| || |||| ||||||||| |||    
T  14954393 aatgtaatgttttgagggaattcaactactttaaggtgaattctattgttttgaatttactttaaagtagttgaattctcttaaaagattacattcactc 14954294  T
Q  311 aaaatatttccccatccaaacacact 336  Q
    |||| ||| | | |||||||||||||    
T  14954293 aaaacattcctctatccaaacacact 14954268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 171 - 263
Target Start/End: Original strand, 3092274 - 3092366
Alignment:
Q  171 tttctctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    ||||||||||||||| ||||||||  ||||||||||||| ||||||| |||||||||| ||||||| || |||| ||| ||||| ||||||||    
T  3092274 tttctctaagagtgtatttggatggaggaatgttttgagggaatgtattgttttgaggaaattcaaatactttggggtaaattccattgtttg 3092366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 217 - 300
Target Start/End: Original strand, 3345783 - 3345867
Alignment:
Q  217 aatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaata-attaaattccctcaaaacatt 300  Q
    ||||||||||||||||||||||| ||| |||| ||||||||||||||||| ||||||||| ||  || |||||||||||||||||    
T  3345783 aatgttttgagggaattcaactactttaaggtaaattctattgtttgaattcacctcaaagtacgttgaattccctcaaaacatt 3345867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 179 - 263
Target Start/End: Complemental strand, 45094544 - 45094460
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||||||| ||| |||||||||||||| |||| |||||||||||||||||| ||||| ||| | |||||||| ||||||||    
T  45094544 agagtgtgtttgaatgagggaatgttttgagggaatataatgttttgagggaatttaactactttaaagtgaattccattgtttg 45094460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 177 - 263
Target Start/End: Complemental strand, 7228087 - 7228001
Alignment:
Q  177 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||| |||||| || ||  ||||||| ||||  ||||||||    
T  7228087 taagagtgtgtttggatggggaaatgttttgagagaatgtaatgttttgaaggaatttaaataccttgaggtaaatttcattgtttg 7228001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 177 - 263
Target Start/End: Original strand, 39630223 - 39630308
Alignment:
Q  177 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||||||||| |||  | ||||||||||| ||||||| |||||||||||||||||| || ||||||| |||||||||||||||    
T  39630223 taagagtgtgtttgaatggagaaatgttttgagggaatgtattgttttgagggaattcaaata-tttgaggggaattctattgtttg 39630308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 271 - 336
Target Start/End: Complemental strand, 17180364 - 17180299
Alignment:
Q  271 ctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    ||||||||| || ||||||||||||||||||||||||||||||| ||| || ||||||||||||||    
T  17180364 ctcaaaatagttgaattccctcaaaacattacattccctcaaaacattccctcatccaaacacact 17180299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 182 - 262
Target Start/End: Original strand, 28740599 - 28740679
Alignment:
Q  182 gtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgttt 262  Q
    ||||||||| ||| || ||||||||||| |||||||||||||||||||||||||| || ||||| || ||||| |||||||    
T  28740599 gtgtgtttgaatggggaaatgttttgagggaatgtaatgttttgagggaattcaaatactttgatgtaaattccattgttt 28740679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 187 - 263
Target Start/End: Original strand, 30698289 - 30698365
Alignment:
Q  187 tttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||| |||||||||||||| |||||||||||||||| ||||||||| ||  ||||||||||||  ||||||||    
T  30698289 tttggatgggggaatgttttgagggaatgtaatgttttgaaggaattcaaataccttgaggtgaatttcattgtttg 30698365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 179 - 263
Target Start/End: Complemental strand, 35047752 - 35047668
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||||||||||| ||||||||||||||  |||||| |||||| ||||||||||| || |||| ||||||||| | ||||||    
T  35047752 agagtgtgtttggatgggggaatgttttgaggaaatgtattgttttaagggaattcaaatactttggggtgaattccaatgtttg 35047668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 281 - 336
Target Start/End: Original strand, 7228028 - 7228083
Alignment:
Q  281 ttaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    ||||||||| |||||||||||||||| ||||||| |||||||||||||||||||||    
T  7228028 ttaaattccttcaaaacattacattctctcaaaacatttccccatccaaacacact 7228083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 284 - 335
Target Start/End: Complemental strand, 28740650 - 28740599
Alignment:
Q  284 aattccctcaaaacattacattccctcaaaatatttccccatccaaacacac 335  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  28740650 aattccctcaaaacattacattccctcaaaacatttccccattcaaacacac 28740599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 284 - 334
Target Start/End: Complemental strand, 11684653 - 11684603
Alignment:
Q  284 aattccctcaaaacattacattccctcaaaatatttccccatccaaacaca 334  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  11684653 aattccctcaaaacattacattccctcaaaacattcccccatccaaacaca 11684603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 263 - 336
Target Start/End: Complemental strand, 10480194 - 10480121
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||| ||||||||| || || |||||||||  |||||||||||||||||||| ||| |||||||||||||||||    
T  10480194 gaattcacctcaaagtatttgaattccctcgtaacattacattccctcaaaacattcccccatccaaacacact 10480121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 263 - 336
Target Start/End: Complemental strand, 13017854 - 13017781
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||| ||||||||| || || |||||||| |||| ||||||||||||||||| |||||| ||||||||||||||    
T  13017854 gaattcacctcaaagtatttgaattcccttaaaatattacattccctcaaaacatttccacatccaaacacact 13017781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 180 - 261
Target Start/End: Complemental strand, 30751418 - 30751338
Alignment:
Q  180 gagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtt 261  Q
    ||||||||||||||| | ||||||||||||| |||||||||||||||| ||||| || || ||| || ||||||||||||||    
T  30751418 gagtgtgtttggatgagagaatgttttgagataatgtaatgttttgagtgaatttaaata-tttaagatgaattctattgtt 30751338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 185 - 266
Target Start/End: Original strand, 40026070 - 40026151
Alignment:
Q  185 tgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaat 266  Q
    |||||| ||| |||||| |||||||  ||| ||||||||||||| |||| || || ||||||||||||||||||||||||||    
T  40026070 tgtttgaatgggggaatattttgaggtaatataatgttttgaggaaatttaaatactttgaggtgaattctattgtttgaat 40026151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 181 - 254
Target Start/End: Complemental strand, 44256263 - 44256191
Alignment:
Q  181 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattc 254  Q
    |||||||||||||| |||||| ||| |||  ||||||||||||||||||||||| | |||||||||||||||||    
T  44256263 agtgtgtttggatgggggaatattt-gaggtaatgtaatgttttgagggaattcgattattttgaggtgaattc 44256191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 217 - 336
Target Start/End: Complemental strand, 10244298 - 10244179
Alignment:
Q  217 aatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaata 316  Q
    |||||||| |||||||||||||| |||||||||| ||| |    |  ||| |||||  || || || ||||||||||||||||||| |||||||| ||||    
T  10244298 aatgttttaagggaattcaactactttgaggtgagttcaaacaataaaattcaccttgaagtagttgaattccctcaaaacattactttccctcagaata 10244199  T
Q  317 tttccccatccaaacacact 336  Q
    ||  ||||||||||||||||    
T  10244198 ttctcccatccaaacacact 10244179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 215 - 262
Target Start/End: Original strand, 11595355 - 11595402
Alignment:
Q  215 gtaatgttttgagggaattcaactattttgaggtgaattctattgttt 262  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||||    
T  11595355 gtaatgttttgagggaattcaaatattttgaggtgaattccattgttt 11595402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 263 - 336
Target Start/End: Complemental strand, 769111 - 769038
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||| |||| |||| || || |||||||| |||||| ||||||||||||||| ||| |||||||||||||||||    
T  769111 gaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacact 769038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 263 - 336
Target Start/End: Original strand, 1583807 - 1583880
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||| |||| |||| || || |||||||| |||||| ||||||||||||||| ||| |||||||||||||||||    
T  1583807 gaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacact 1583880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 217 - 266
Target Start/End: Original strand, 21504488 - 21504537
Alignment:
Q  217 aatgttttgagggaattcaactattttgaggtgaattctattgtttgaat 266  Q
    |||||||||||||||||||| ||||||||| ||||||| |||||||||||    
T  21504488 aatgttttgagggaattcaaatattttgagatgaattccattgtttgaat 21504537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 206 - 263
Target Start/End: Complemental strand, 32839694 - 32839637
Alignment:
Q  206 tgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||| |||||||||||||||||||||||||| || ||||| |||||||| ||||||||    
T  32839694 tgagggaatgtaatgttttgagggaattcaaatactttgacgtgaattccattgtttg 32839637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 263 - 336
Target Start/End: Original strand, 33189255 - 33189328
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||| |||| |||| || || |||||||| |||||| ||||||||||||||| ||| |||||||||||||||||    
T  33189255 gaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacact 33189328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 275 - 336
Target Start/End: Complemental strand, 39630288 - 39630227
Alignment:
Q  275 aaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    ||||| || ||||||||||||||| ||||||||||||||| ||||| |||| ||||||||||    
T  39630288 aaatatttgaattccctcaaaacaatacattccctcaaaacatttctccattcaaacacact 39630227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 263 - 332
Target Start/End: Complemental strand, 40026139 - 40026070
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaaca 332  Q
    |||| ||||||||| || ||||||| ||||||||||||| ||| |||||||||||| |||||| ||||||    
T  40026139 gaattcacctcaaagtatttaaatttcctcaaaacattatattacctcaaaatattcccccattcaaaca 40026070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 11141359 - 11141307
Alignment:
Q  284 aattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||||||| |||||| ||||||||||||||| ||| |||||||||||||||||    
T  11141359 aattcccttaaaacaatacattccctcaaaacattcccccatccaaacacact 11141307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 199 - 266
Target Start/End: Original strand, 740724 - 740791
Alignment:
Q  199 aatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaat 266  Q
    |||||||||||| |||||||||||||| | |||||||  |  ||||||||||||| ||||||||||||    
T  740724 aatgttttgagataatgtaatgttttgtgagaattcatatcatttgaggtgaattttattgtttgaat 740791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 262
Target Start/End: Original strand, 11607257 - 11607304
Alignment:
Q  215 gtaatgttttgagggaattcaactattttgaggtgaattctattgttt 262  Q
    |||||||||||||||||||||| || |||||||||||||| |||||||    
T  11607257 gtaatgttttgagggaattcaaatactttgaggtgaattccattgttt 11607304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 281 - 336
Target Start/End: Original strand, 45094487 - 45094542
Alignment:
Q  281 ttaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    ||||||||||||||||||||| |||||||||||| ||| || ||| ||||||||||    
T  45094487 ttaaattccctcaaaacattatattccctcaaaacattccctcattcaaacacact 45094542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 205 - 263
Target Start/End: Complemental strand, 7167714 - 7167656
Alignment:
Q  205 ttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    ||||| |||||||||||||||| ||||||||| || |||||||||||||  ||||||||    
T  7167714 ttgagggaatgtaatgttttgaaggaattcaaatactttgaggtgaatttcattgtttg 7167656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 263
Target Start/End: Complemental strand, 8736476 - 8736430
Alignment:
Q  217 aatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||||||||||||||| || |||||||||||||| ||||||||    
T  8736476 aatgttttgagggaattcaaatactttgaggtgaattccattgtttg 8736430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 177 - 239
Target Start/End: Original strand, 14954264 - 14954326
Alignment:
Q  177 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaacta 239  Q
    |||||||||||||||||   ||||||||||||| ||||||||| |||| || |||||||||||    
T  14954264 taagagtgtgtttggatagaggaatgttttgagtgaatgtaatcttttaagagaattcaacta 14954326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 284 - 330
Target Start/End: Complemental strand, 30698335 - 30698289
Alignment:
Q  284 aattccctcaaaacattacattccctcaaaatatttccccatccaaa 330  Q
    |||||| |||||||||||||||||||||||| ||| |||||||||||    
T  30698335 aattccttcaaaacattacattccctcaaaacattcccccatccaaa 30698289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 217 - 254
Target Start/End: Complemental strand, 11684711 - 11684674
Alignment:
Q  217 aatgttttgagggaattcaactattttgaggtgaattc 254  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  11684711 aatgttttgagggaattcaactactttgaggtgaattc 11684674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 263 - 336
Target Start/End: Complemental strand, 17905729 - 17905656
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||| |||||||||||| || |||||| | |||||||||||||| ||||||| ||| || ||||| ||||||||    
T  17905729 gaattcacctcaaaatatttgaattcctttaaaacattacattctctcaaaacattccctcatcctaacacact 17905656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 263 - 336
Target Start/End: Original strand, 35047677 - 35047750
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||| |||| |||| || || |||||||| |||||| |||||| |||||||| ||| |||||||||||||||||    
T  35047677 gaattcaccccaaagtatttgaattcccttaaaacaatacatttcctcaaaacattcccccatccaaacacact 35047750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 268 - 336
Target Start/End: Complemental strand, 8735914 - 8735846
Alignment:
Q  268 cacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    ||||||||| || || |||||||||  ||||||| |||||||||||| || | ||||||||||||||||    
T  8735914 cacctcaaagtatttgaattccctcgtaacattatattccctcaaaacatgttcccatccaaacacact 8735846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 175 - 263
Target Start/End: Original strand, 11606709 - 11606797
Alignment:
Q  175 tctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    ||||||| | |||| ||||| |||||||||||||  ||||||||| |||| | ||||| ||| || |||||||||||||  ||||||||    
T  11606709 tctaagaatttgttaggatgagggaatgttttgaaggaatgtaatattttcaaggaatacaaatactttgaggtgaatttaattgtttg 11606797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 179 - 249
Target Start/End: Original strand, 8735844 - 8735914
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtg 249  Q
    |||||||||||||||| |   |||||||||| |||| |||||||  |||||||||||| || |||||||||    
T  8735844 agagtgtgtttggatgggaacatgttttgagggaatataatgttacgagggaattcaaatactttgaggtg 8735914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 263
Target Start/End: Original strand, 20935744 - 20935790
Alignment:
Q  217 aatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||||||||||||||| || ||||| |||||||| ||||||||    
T  20935744 aatgttttgagggaattcaaatactttgatgtgaattccattgtttg 20935790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 254
Target Start/End: Original strand, 11824718 - 11824755
Alignment:
Q  217 aatgttttgagggaattcaactattttgaggtgaattc 254  Q
    ||||||||||||||||||||||| |||||| |||||||    
T  11824718 aatgttttgagggaattcaactactttgagatgaattc 11824755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 275 - 336
Target Start/End: Original strand, 30751356 - 30751417
Alignment:
Q  275 aaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    ||||| |||||||| ||||||||||||||||  ||||||| |||  | ||||||||||||||    
T  30751356 aaatatttaaattcactcaaaacattacattatctcaaaacattctctcatccaaacacact 30751417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 184 - 225
Target Start/End: Complemental strand, 39478017 - 39477976
Alignment:
Q  184 gtgtttggatgtgggaatgttttgagagaatgtaatgttttg 225  Q
    ||||||||||||| ||||||||||||  ||||||||||||||    
T  39478017 gtgtttggatgtgagaatgttttgaggtaatgtaatgttttg 39477976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 336
Target Start/End: Original strand, 44205678 - 44205711
Alignment:
Q  303 attccctcaaaatatttccccatccaaacacact 336  Q
    |||||||||||| |||||||||||||||||||||    
T  44205678 attccctcaaaacatttccccatccaaacacact 44205711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 263
Target Start/End: Complemental strand, 2274865 - 2274777
Alignment:
Q  175 tctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    ||||| ||||||||||||||  ||||||||| |||  |||  ||| |||| ||||||||||| |||||| || | ||||| ||||||||    
T  2274865 tctaatagtgtgtttggatgaaggaatgtttcgaggtaatacaatattttaagggaattcaaatatttttagatcaattccattgtttg 2274777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 3092336 - 3092284
Alignment:
Q  284 aattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||| |||||||||| ||||||||||||||| ||| | ||||||||| |||||    
T  3092336 aatttcctcaaaacaatacattccctcaaaacattcctccatccaaatacact 3092284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 268 - 312
Target Start/End: Original strand, 7167670 - 7167714
Alignment:
Q  268 cacctcaaaataattaaattccctcaaaacattacattccctcaa 312  Q
    ||||||||| || || |||||| ||||||||||||||||||||||    
T  7167670 cacctcaaagtatttgaattccttcaaaacattacattccctcaa 7167714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 263 - 311
Target Start/End: Original strand, 32839646 - 32839694
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctca 311  Q
    |||| ||| ||||| || || ||||||||||||||||||||||||||||    
T  32839646 gaattcacgtcaaagtatttgaattccctcaaaacattacattccctca 32839694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 44255674 - 44255718
Alignment:
Q  219 tgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    ||||||||| |||||||| || |||| ||||||||||||||||||    
T  44255674 tgttttgagagaattcaaatactttggggtgaattctattgtttg 44255718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 132; Significance: 2e-68; HSPs: 83)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 179 - 338
Target Start/End: Original strand, 3853616 - 3853775
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaat 278  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  3853616 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgaggtgaattctattgtttgaatccacctcaaaat 3853715  T
Q  279 aattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacactat 338  Q
    |||| ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  3853716 aattgaattccctccaaacattacattacctcaaaatatttccccatccaaacacactat 3853775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 179 - 338
Target Start/End: Original strand, 3858074 - 3858233
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaat 278  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  3858074 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaggaaattcaactactttgaggtgaattctattgtttgaatccacctcaaaat 3858173  T
Q  279 aattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacactat 338  Q
    |||| ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  3858174 aattgaattccctccaaacattacattacctcaaaatatttccccatccaaacacactat 3858233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 196 - 339
Target Start/End: Complemental strand, 13404969 - 13404826
Alignment:
Q  196 gggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaa 295  Q
    |||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||| |||||||||||||||||||||||||||| ||||||||||||    
T  13404969 gggaatgttttgagggaatgtaatgttttgagggaattcaactactttgagatgaattttattgtttgaatccacctcaaaataattgaattccctcaaa 13404870  T
Q  296 acattacattccctcaaaatatttccccatccaaacacactata 339  Q
    |||||||||| |||||||||||||||||||||||||||||||||    
T  13404869 acattacattacctcaaaatatttccccatccaaacacactata 13404826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 179 - 336
Target Start/End: Complemental strand, 17111028 - 17110871
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaat 278  Q
    ||||||||||||||||  | ||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| || |||||| |    
T  17111028 agagtgtgtttggatggagaaatgttttgagggaatgtaatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcaactcaaagt 17110929  T
Q  279 aattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    | || ||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  17110928 agttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacacact 17110871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 176 - 336
Target Start/End: Original strand, 17110866 - 17111026
Alignment:
Q  176 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaa 275  Q
    ||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||| |    | |||| ||||| ||    
T  17110866 ctaagagtgtgtttggatggggaaatgttttgagggaatgtaatgttttgagggaattcaactactttgagttgaattcaaacaatagaattcaccttaa 17110965  T
Q  276 aataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    | || || ||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  17110966 agtagttgaattccctcaaaacattacattccctcaaaacatttctccatccaaacacact 17111026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 179 - 336
Target Start/End: Original strand, 33902667 - 33902823
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattg-tttgaatccacctcaaaa 277  Q
    ||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||||| |||  |||||||||||||| ||||||| |||||||||     
T  33902667 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaactacttt--ggtgaattctattgttttgaattcacctcaaag 33902764  T
Q  278 ta-attaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    ||  || |||||||||||||||  |||||||||| ||| ||| |||||||| ||||||||    
T  33902765 tagtttgaattccctcaaaacaaaacattccctc-aaacattcccccatcccaacacact 33902823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 181 - 336
Target Start/End: Complemental strand, 3853773 - 3853618
Alignment:
Q  181 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataa 280  Q
    |||||||||||||| || ||| |||||||  |||||||||||| |||||||||||| |||||||||||| |||| |    | |||| ||||||||| ||     
T  3853773 agtgtgtttggatggggaaatattttgaggtaatgtaatgtttggagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtag 3853674  T
Q  281 ttaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    || |||| |||||||||||||||||||||||||| ||| |||||||||||||||||    
T  3853673 ttgaatttcctcaaaacattacattccctcaaaacattcccccatccaaacacact 3853618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 181 - 336
Target Start/End: Complemental strand, 3858231 - 3858076
Alignment:
Q  181 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataa 280  Q
    |||||||||||||| || ||| |||||||  |||||||||||| |||||||||||| |||||||||||| |||| |    | |||| ||||||||| ||     
T  3858231 agtgtgtttggatggggaaatattttgaggtaatgtaatgtttggagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtag 3858132  T
Q  281 ttaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    || |||| |||||||||||||||||||||||||| ||| |||||||||||||||||    
T  3858131 ttgaatttcctcaaaacattacattccctcaaaacattcccccatccaaacacact 3858076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 258 - 336
Target Start/End: Original strand, 37268086 - 37268164
Alignment:
Q  258 tgtttgaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||    
T  37268086 tgtttgaatccacctcaaaataattaaattccctcaaaacattacattacctcaaaatattcccctatccaaacacact 37268164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 179 - 300
Target Start/End: Complemental strand, 14800119 - 14799999
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaat 278  Q
    |||||||||||||||| |||||| ||||||| ||| ||||||||||||||||||||||||| ||  ||||||||| |||||||||||  |||||| ||||    
T  14800119 agagtgtgtttggatgggggaatattttgagggaaagtaatgttttgagggaattcaactacttcaaggtgaattttattgtttgaactcacctc-aaat 14800021  T
Q  279 aattaaattccctcaaaacatt 300  Q
    | || |||||||||||||||||    
T  14800020 agtttaattccctcaaaacatt 14799999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 217 - 334
Target Start/End: Complemental strand, 30435365 - 30435250
Alignment:
Q  217 aatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaata 316  Q
    ||||||||||||||||||||||||||  |||| ||||||||||||| ||| || |||||| || |||||||||||| ||||||||||||||||||||| |    
T  30435365 aatgttttgagggaattcaactattta-aggtaaattctattgtttaaattcaactcaaa-tagttaaattccctccaaacattacattccctcaaaaca 30435268  T
Q  317 tttccccatccaaacaca 334  Q
    |||| |||||||||||||    
T  30435267 tttctccatccaaacaca 30435250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 176 - 314
Target Start/End: Original strand, 40046801 - 40046925
Alignment:
Q  176 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaa 275  Q
    |||||||||||||||||||   |||||||||||| ||||||||||||||||||||||||||||| ||||||              |||||||||||||||    
T  40046801 ctaagagtgtgtttggatggatgaatgttttgagggaatgtaatgttttgagggaattcaactactttgag--------------ttgaatccacctcaa 40046886  T
Q  276 aataattaaattccctcaaaacattacattccctcaaaa 314  Q
    ||||||| |||||||||||||||||||||| ||||||||    
T  40046887 aataattgaattccctcaaaacattacattacctcaaaa 40046925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 181 - 277
Target Start/End: Complemental strand, 4156324 - 4156228
Alignment:
Q  181 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaa 277  Q
    |||||||||||||| | |||| ||||||| ||||||||||||||||||||||||||||| ||| || ||||||||||||||||||| || |||||||    
T  4156324 agtgtgtttggatgggagaatattttgagggaatgtaatgttttgagggaattcaactactttaagatgaattctattgtttgaattcaactcaaaa 4156228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 181 - 328
Target Start/End: Original strand, 13404829 - 13404976
Alignment:
Q  181 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataa 280  Q
    |||||||||||||| || ||| |||||||  ||||||||||||||||||||||||| |||||||||||| |||| |    |  ||| || |||||| ||     
T  13404829 agtgtgtttggatggggaaatattttgaggtaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaataaaattcatctcaaagtag 13404928  T
Q  281 ttaaattccctcaaaacattacattccctcaaaatatttccccatcca 328  Q
    || ||||||||||||||||||||||||||||||| ||| ||| |||||    
T  13404929 ttgaattccctcaaaacattacattccctcaaaacattcccctatcca 13404976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 217 - 296
Target Start/End: Original strand, 42739969 - 42740048
Alignment:
Q  217 aatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaa 296  Q
    ||||||||||||||||||||||| |||||| |||||| ||||||| |||||||||||||||||||| |||||||||||||    
T  42739969 aatgttttgagggaattcaactactttgagatgaattttattgttagaatccacctcaaaataattgaattccctcaaaa 42740048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 177 - 254
Target Start/End: Complemental strand, 42711441 - 42711364
Alignment:
Q  177 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattc 254  Q
    |||||||||||||||||  |||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||    
T  42711441 taagagtgtgtttggattggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgagttgaattc 42711364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 179 - 263
Target Start/End: Original strand, 24044960 - 24045044
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||| ||  ||||||||||||| ||||||||    
T  24044960 agagtgtgtttggatgagggaatgttttgagggaatgtaatgttttgaaggaattcaaataccttgaggtgaattccattgtttg 24045044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 176 - 263
Target Start/End: Complemental strand, 33377383 - 33377296
Alignment:
Q  176 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    ||||||||||||||||||| |||||||||||||| |||| || |||||||||||||||||| || |||| ||||||||| ||||||||    
T  33377383 ctaagagtgtgtttggatgggggaatgttttgagggaatatattgttttgagggaattcaaatactttggggtgaattccattgtttg 33377296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 177 - 263
Target Start/End: Original strand, 23011732 - 23011818
Alignment:
Q  177 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||||||||||| | | |||||||||||| |||||||||||| ||||||||||||| || |||||||||||||| ||||||||    
T  23011732 taagagtgtgtttggacgggagaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtgaattccattgtttg 23011818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 179 - 263
Target Start/End: Complemental strand, 29257434 - 29257350
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||||||||||| |||||||||||||| ||||||| |||||| ||||||||||| || |||| ||||||||| ||||||||    
T  29257434 agagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttggggtgaattccattgtttg 29257350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 179 - 263
Target Start/End: Original strand, 44889354 - 44889438
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    ||||||||||||||||  ||||||||||||| |||| ||||||||||||||||||||| || ||||| |||||||| ||||||||    
T  44889354 agagtgtgtttggatggaggaatgttttgagggaatataatgttttgagggaattcaaatactttgatgtgaattccattgtttg 44889438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 177 - 264
Target Start/End: Complemental strand, 11744804 - 11744717
Alignment:
Q  177 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttga 264  Q
    |||||||||||||||||| | |||| ||| ||| |||||||||||| ||| |||||||||||| ||| ||||||||||||||||||||    
T  11744804 taagagtgtgtttggatgagagaatatttagagggaatgtaatgttgtgaaggaattcaactagtttaaggtgaattctattgtttga 11744717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 176 - 336
Target Start/End: Complemental strand, 33902828 - 33902669
Alignment:
Q  176 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaa-ctattttgaggtgaattctattgttt-gaatccacctc 273  Q
    ||||||||||||| ||||| |||||||||| ||| ||||||  |||||||||||||||||| ||| |||||||||||||| |     | |||| ||||      
T  33902828 ctaagagtgtgttgggatgggggaatgttt-gagggaatgttttgttttgagggaattcaaactactttgaggtgaattcaaaacaatagaattcacc-- 33902732  T
Q  274 aaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    ||| || || ||||||||||||||||||||||||||||||| ||| | |||||||||||||||    
T  33902731 aaagtagttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacact 33902669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 177 - 263
Target Start/End: Complemental strand, 1088362 - 1088276
Alignment:
Q  177 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    ||||||||||||||| ||  ||||||||||||||||||||| |||||||||| ||||||| ||||||| ||| ||||| ||||||||    
T  1088362 taagagtgtgtttgggtggaggaatgttttgagagaatgtattgttttgaggaaattcaaatattttggggtaaattccattgtttg 1088276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 181 - 263
Target Start/End: Complemental strand, 29482888 - 29482806
Alignment:
Q  181 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||||||||| |||||||||||||| ||| ||| |||||||||||||||||| || |||| ||||||||| ||||||||    
T  29482888 agtgtgtttggatgggggaatgttttgagggaacgtattgttttgagggaattcaaatactttggggtgaattccattgtttg 29482806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 171 - 263
Target Start/End: Complemental strand, 28324753 - 28324661
Alignment:
Q  171 tttctctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    ||||||| ||||||||||||||||  ||||||||||||| |||||||||||||||| ||||||||| ||  ||||| ||||||  ||||||||    
T  28324753 tttctcttagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaaggaattcaaataccttgagctgaattacattgtttg 28324661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 179 - 255
Target Start/End: Original strand, 31807409 - 31807484
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattct 255  Q
    |||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||  || ||||||||    
T  31807409 agagtgtgtttggatgagagaatgttttgag-gaatgtaatgttttgagggaattcaactatttaaagttgaattct 31807484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 217 - 336
Target Start/End: Original strand, 42711324 - 42711437
Alignment:
Q  217 aatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaata 316  Q
    |||||||||||| |||||||||| |||||| ||||| ||      ||||| || |||||| || || ||||||||||||||||||||||||||||||| |    
T  42711324 aatgttttgaggaaattcaactactttgagttgaatact------tgaattcaactcaaagtagttgaattccctcaaaacattacattccctcaaaaca 42711417  T
Q  317 tttccccatccaaacacact 336  Q
    || ||| |||||||||||||    
T  42711418 ttccccaatccaaacacact 42711437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 183 - 263
Target Start/End: Complemental strand, 44346757 - 44346677
Alignment:
Q  183 tgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||||||| |||||||||||||| ||||||| |||||| ||||||||||| || |||| ||||||||| ||||||||    
T  44346757 tgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttggggtgaattccattgtttg 44346677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 175 - 262
Target Start/End: Original strand, 33986000 - 33986087
Alignment:
Q  175 tctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgttt 262  Q
    |||||||||||||||||||| |||||||| ||||   |||||||||||||||| |||||||| || |||||||||||||  |||||||    
T  33986000 tctaagagtgtgtttggatgggggaatgtcttgaagtaatgtaatgttttgagagaattcaaatactttgaggtgaatttcattgttt 33986087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 176 - 263
Target Start/End: Original strand, 36103098 - 36103185
Alignment:
Q  176 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||||||||||||||  ||||||||||||| |||||||||||||| ||| ||||||| || ||||| |||||||  ||||||||    
T  36103098 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttaaggaaattcaaatactttgatgtgaattgcattgtttg 36103185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 176 - 262
Target Start/End: Original strand, 14236 - 14321
Alignment:
Q  176 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgttt 262  Q
    ||||||||||||||||||| |||||||||| ||| |||||||||||||| ||||||||||| || |||| ||||||||  |||||||    
T  14236 ctaagagtgtgtttggatg-gggaatgtttggagggaatgtaatgttttaagggaattcaaatactttggggtgaatttcattgttt 14321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 284 - 338
Target Start/End: Original strand, 4156272 - 4156326
Alignment:
Q  284 aattccctcaaaacattacattccctcaaaatatttccccatccaaacacactat 338  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  4156272 aattccctcaaaacattacattccctcaaaatattctcccatccaaacacactat 4156326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 195 - 336
Target Start/End: Complemental strand, 40046933 - 40046806
Alignment:
Q  195 tgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaa 294  Q
    |||||||||||||||  ||||||||||||||||||||||||| |||||||||||| |||              || |||||| || || |||||||||||    
T  40046933 tgggaatgttttgaggtaatgtaatgttttgagggaattcaattattttgaggtggatt--------------caactcaaagtagttgaattccctcaa 40046848  T
Q  295 aacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||||||||||||||||||| |||   |||||||||||||||    
T  40046847 aacattacattccctcaaaacattcatccatccaaacacact 40046806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 182 - 263
Target Start/End: Complemental strand, 35979084 - 35979003
Alignment:
Q  182 gtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||||||||  ||||||||||||| ||||||||| ||  |||||||||||| || |||||||||||||| ||||||||    
T  35979084 gtgtgtttggatggaggaatgttttgagggaatgtaatcttaagagggaattcaaatactttgaggtgaattccattgtttg 35979003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 211 - 300
Target Start/End: Complemental strand, 38573522 - 38573433
Alignment:
Q  211 gaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacatt 300  Q
    ||||||| |||||||||| |||||||||| |||||| ||||||||||||||||||| || || ||| || || |||| ||||||||||||    
T  38573522 gaatgtagtgttttgaggaaattcaactactttgagttgaattctattgtttgaattcaactaaaagtagttgaatttcctcaaaacatt 38573433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 284 - 336
Target Start/End: Original strand, 14800065 - 14800117
Alignment:
Q  284 aattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  14800065 aattccctcaaaacattactttccctcaaaatattcccccatccaaacacact 14800117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 177 - 236
Target Start/End: Original strand, 14991690 - 14991749
Alignment:
Q  177 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaa 236  Q
    |||||||||||||||||| ||||||||||||||  ||||||||||||||||| |||||||    
T  14991690 taagagtgtgtttggatgggggaatgttttgaggtaatgtaatgttttgaggcaattcaa 14991749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 179 - 254
Target Start/End: Complemental strand, 37268166 - 37268091
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattc 254  Q
    |||||||||||||||  |||||| |||||||  |||||||||||||||||||||| || |||||||||||| ||||    
T  37268166 agagtgtgtttggataggggaatattttgaggtaatgtaatgttttgagggaatttaattattttgaggtggattc 37268091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 179 - 263
Target Start/End: Complemental strand, 515615 - 515531
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||| ||||| ||||| || ||||| |||||||  ||||||||    
T  515615 agagtgtgtttggatggaggaatgttttgaaggaatgtaatgttttaagggagttcaaatactttgatgtgaatttcattgtttg 515531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 199 - 263
Target Start/End: Complemental strand, 15186880 - 15186816
Alignment:
Q  199 aatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||||||| ||||||||||||||||  ||||||| || ||| |||||||||||||||||||    
T  15186880 aatgttttgagataatgtaatgttttgagtaaattcaaatagtttaaggtgaattctattgtttg 15186816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 171 - 227
Target Start/End: Complemental strand, 32626125 - 32626069
Alignment:
Q  171 tttctctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgag 227  Q
    |||||||||||||||| ||||||| |||||| ||||||| |||||||||||||||||    
T  32626125 tttctctaagagtgtgcttggatgggggaatcttttgagggaatgtaatgttttgag 32626069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 196 - 263
Target Start/End: Original strand, 8049271 - 8049338
Alignment:
Q  196 gggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||||||||| |||| ||||||||||||||||||||| || |||||||| ||||  ||||||||    
T  8049271 gggaatgttttgagggaatataatgttttgagggaattcaaatactttgaggtaaatttcattgtttg 8049338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 179 - 262
Target Start/End: Original strand, 9982637 - 9982719
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgttt 262  Q
    |||| ||||||||||| | ||||||||| ||  |||||||||||||||| ||||| || ||||||||||||||||| |||||||    
T  9982637 agagcgtgtttggatg-gagaatgttttaaggtaatgtaatgttttgagagaatttaaatattttgaggtgaattccattgttt 9982719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 176 - 263
Target Start/End: Complemental strand, 28190788 - 28190702
Alignment:
Q  176 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||||||||||||||||||||||||| ||| || ||||||  ||  |  |||||||| ||||||||||||||||| ||||||||    
T  28190788 ctaagagtgtgtttggatgtgggaatgtttcgagtgattgtaat-attgaaatgaattcaaatattttgaggtgaattcaattgtttg 28190702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 284 - 338
Target Start/End: Complemental strand, 8689186 - 8689132
Alignment:
Q  284 aattccctcaaaacattacattccctcaaaatatttccccatccaaacacactat 338  Q
    |||||||||||||||||||||||| |||||| ||||| ||||||||||| |||||    
T  8689186 aattccctcaaaacattacattccttcaaaacatttctccatccaaacatactat 8689132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 263 - 337
Target Start/End: Original strand, 29482815 - 29482889
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacacta 337  Q
    |||| |||| |||| || || ||||||||||||||| ||| ||||||||||| ||| ||||||||||||||||||    
T  29482815 gaattcaccccaaagtatttgaattccctcaaaacaatacgttccctcaaaacattcccccatccaaacacacta 29482889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 263 - 336
Target Start/End: Complemental strand, 23011809 - 23011736
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||| ||||||||| || || |||||||||| |||||||||||||||||||| |||  ||| ||||||||||||    
T  23011809 gaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattctcccgtccaaacacact 23011736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 263 - 336
Target Start/End: Complemental strand, 24045035 - 24044962
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||| ||||||||  || || |||||| |||||||||||||||||||||||| ||| || ||||||||||||||    
T  24045035 gaattcacctcaaggtatttgaattccttcaaaacattacattccctcaaaacattccctcatccaaacacact 24044962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 263 - 336
Target Start/End: Original strand, 29257359 - 29257432
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||| |||| |||| || || |||||||| |||||| ||||||||||||||| ||| |||||||||||||||||    
T  29257359 gaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacact 29257432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 263 - 336
Target Start/End: Original strand, 33377305 - 33377378
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||| |||| |||| || || ||||||||||||||| || |||||||||||| ||| |||||||||||||||||    
T  33377305 gaattcaccccaaagtatttgaattccctcaaaacaatatattccctcaaaacattcccccatccaaacacact 33377378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 263 - 336
Target Start/End: Complemental strand, 44889429 - 44889356
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||| ||| ||||| || || |||||||||||||||||| |||||||||||| ||| | |||||||||||||||    
T  44889429 gaattcacatcaaagtatttgaattccctcaaaacattatattccctcaaaacattcctccatccaaacacact 44889356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 14991746 - 14991694
Alignment:
Q  284 aattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||| ||||||||||||||||| |||||||| ||| |||||||||||||||||    
T  14991746 aattgcctcaaaacattacattacctcaaaacattcccccatccaaacacact 14991694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 284 - 336
Target Start/End: Original strand, 28324691 - 28324743
Alignment:
Q  284 aattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||||| |||||||||||||||||||||||| ||| | |||||||||||||||    
T  28324691 aattccttcaaaacattacattccctcaaaacattcctccatccaaacacact 28324743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 172 - 239
Target Start/End: Original strand, 8689125 - 8689192
Alignment:
Q  172 ttctctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaacta 239  Q
    |||| ||| ||| ||||||||||  | ||||||||||  |||||||||||||||||||||||||||||    
T  8689125 ttctttaatagtatgtttggatggagaaatgttttgaaggaatgtaatgttttgagggaattcaacta 8689192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 212 - 263
Target Start/End: Original strand, 13144616 - 13144667
Alignment:
Q  212 aatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    ||||||||||| ||||||||||||| || |||||||||||||| ||||||||    
T  13144616 aatgtaatgttatgagggaattcaaatactttgaggtgaattccattgtttg 13144667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 27322734 - 27322687
Alignment:
Q  177 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgtttt 224  Q
    |||||||||||||||||| | |||||||||||| ||||||||||||||    
T  27322734 taagagtgtgtttggatgggagaatgttttgagggaatgtaatgtttt 27322687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 183 - 242
Target Start/End: Original strand, 30435250 - 30435309
Alignment:
Q  183 tgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattt 242  Q
    ||||||||||||  | ||||||||||| ||||||||||||| ||||||||| ||||||||    
T  30435250 tgtgtttggatggagaaatgttttgagggaatgtaatgtttggagggaatttaactattt 30435309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 263 - 334
Target Start/End: Original strand, 44346686 - 44346757
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacaca 334  Q
    |||| |||| |||| || || |||||||| |||||| ||||||||||||||| ||| |||||||||||||||    
T  44346686 gaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacaca 44346757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 263 - 333
Target Start/End: Complemental strand, 9982711 - 9982642
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacac 333  Q
    |||| |||||||||||| |||||||| |||||||||||||||| ||| |||| | ||| ||||||||||||    
T  9982711 gaattcacctcaaaatatttaaattctctcaaaacattacattaccttaaaaca-ttctccatccaaacac 9982642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 263
Target Start/End: Complemental strand, 26520484 - 26520438
Alignment:
Q  217 aatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||||||||||||||| || |||||||||||||| ||||||||    
T  26520484 aatgttttgagggaattcaaatactttgaggtgaattccattgtttg 26520438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 263
Target Start/End: Complemental strand, 30444978 - 30444932
Alignment:
Q  217 aatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||||||||||||||| || |||||||||||||| ||||||||    
T  30444978 aatgttttgagggaattcaaatactttgaggtgaattccattgtttg 30444932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 290 - 336
Target Start/End: Original strand, 32626069 - 32626115
Alignment:
Q  290 ctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    ||||||||||||||||||||||||| ||| |||||||||| ||||||    
T  32626069 ctcaaaacattacattccctcaaaagattcccccatccaagcacact 32626115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 263
Target Start/End: Original strand, 34008819 - 34008865
Alignment:
Q  217 aatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||||||||||||||| || |||||||||||||| ||||||||    
T  34008819 aatgttttgagggaattcaaatactttgaggtgaattccattgtttg 34008865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 14292 - 14241
Alignment:
Q  284 aattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||||||| |||||||||||||||||| ||| | |||||||||||||||||||    
T  14292 aattcccttaaaacattacattccctccaaaca-ttccccatccaaacacact 14241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 217 - 253
Target Start/End: Original strand, 7202885 - 7202921
Alignment:
Q  217 aatgttttgagggaattcaactattttgaggtgaatt 253  Q
    ||||||||||||||||||||||| |||||||||||||    
T  7202885 aatgttttgagggaattcaactactttgaggtgaatt 7202921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 268 - 336
Target Start/End: Complemental strand, 33986074 - 33986006
Alignment:
Q  268 cacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    ||||||||| || || ||||| |||||||||||||||| | |||| | ||| |||||||||||||||||    
T  33986074 cacctcaaagtatttgaattctctcaaaacattacattacttcaagacattcccccatccaaacacact 33986006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 263 - 335
Target Start/End: Original strand, 35979012 - 35979084
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacac 335  Q
    |||| ||||||||| || || |||||||||  || ||||||||||||||||| ||| | ||||||||||||||    
T  35979012 gaattcacctcaaagtatttgaattccctcttaagattacattccctcaaaacattcctccatccaaacacac 35979084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 36103155 - 36103103
Alignment:
Q  284 aattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||| ||| |||||||||||||||||||||| ||| | |||||||||||||||    
T  36103155 aatttccttaaaacattacattccctcaaaacattcctccatccaaacacact 36103103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 303 - 339
Target Start/End: Original strand, 42740037 - 42740073
Alignment:
Q  303 attccctcaaaatatttccccatccaaacacactata 339  Q
    |||||||||||||||||||||||||||||||| ||||    
T  42740037 attccctcaaaatatttccccatccaaacacattata 42740073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 293 - 336
Target Start/End: Original strand, 27322687 - 27322730
Alignment:
Q  293 aaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||||||||||||||||||||| |||  ||||||||||||||||    
T  27322687 aaaacattacattccctcaaaacattctcccatccaaacacact 27322730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 211 - 254
Target Start/End: Original strand, 32626023 - 32626066
Alignment:
Q  211 gaatgtaatgttttgagggaattcaactattttgaggtgaattc 254  Q
    |||| |||||||||||||||||||||||| ||| ||||||||||    
T  32626023 gaatataatgttttgagggaattcaactactttaaggtgaattc 32626066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 269 - 323
Target Start/End: Complemental strand, 8049323 - 8049269
Alignment:
Q  269 acctcaaaataattaaattccctcaaaacattacattccctcaaaatatttcccc 323  Q
    |||||||| || || |||||||||||||||||| |||||||||||| ||| ||||    
T  8049323 acctcaaagtatttgaattccctcaaaacattatattccctcaaaacattccccc 8049269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 214
Target Start/End: Original strand, 14799976 - 14800014
Alignment:
Q  176 ctaagagtgtgtttggatgtgggaatgttttgagagaat 214  Q
    ||||||||||||||||||| |||||||||||||| ||||    
T  14799976 ctaagagtgtgtttggatgggggaatgttttgagggaat 14800014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 263
Target Start/End: Original strand, 29611408 - 29611454
Alignment:
Q  217 aatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||||||||||||||| || |||||||||||||  ||||||||    
T  29611408 aatgttttgagggaattcaaatactttgaggtgaatttcattgtttg 29611454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 287 - 336
Target Start/End: Original strand, 515564 - 515613
Alignment:
Q  287 tccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    ||||| ||||||||||||||| |||||| ||| | |||||||||||||||    
T  515564 tcccttaaaacattacattccttcaaaacattcctccatccaaacacact 515613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 336
Target Start/End: Original strand, 11744727 - 11744800
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||| ||||| ||| || || |||||| ||| |||||||||||||||| |||||||  | ||||||||||||||    
T  11744727 gaattcaccttaaactagttgaattccttcacaacattacattccctctaaatattctctcatccaaacacact 11744800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 266
Target Start/End: Complemental strand, 24510322 - 24510273
Alignment:
Q  217 aatgttttgagggaattcaactattttgaggtgaattctattgtttgaat 266  Q
    ||||||||||||| ||| || |||||||||||||| || |||||||||||    
T  24510322 aatgttttgaggggatttaagtattttgaggtgaactccattgtttgaat 24510273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 336
Target Start/End: Original strand, 30435350 - 30435383
Alignment:
Q  303 attccctcaaaatatttccccatccaaacacact 336  Q
    |||||||||||| |||||||||||||||||||||    
T  30435350 attccctcaaaacatttccccatccaaacacact 30435383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 275 - 336
Target Start/End: Complemental strand, 31807471 - 31807411
Alignment:
Q  275 aaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    ||||| || |||||||||||||||||||||| |||||||| |||  | ||||||||||||||    
T  31807471 aaatagttgaattccctcaaaacattacatt-cctcaaaacattctctcatccaaacacact 31807411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Complemental strand, 31980533 - 31980492
Alignment:
Q  212 aatgtaatgttttgagggaattcaactattttgaggtgaatt 253  Q
    ||||||||||||| ||||||||||| ||||||| ||||||||    
T  31980533 aatgtaatgttttaagggaattcaaatattttggggtgaatt 31980492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 214
Target Start/End: Complemental strand, 30445003 - 30444963
Alignment:
Q  174 ctctaagagtgtgtttggatgtgggaatgttttgagagaat 214  Q
    |||||||||||||||||||||  ||||||||||||| ||||    
T  30445003 ctctaagagtgtgtttggatggaggaatgttttgagggaat 30444963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #83
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 263
Target Start/End: Complemental strand, 35404809 - 35404741
Alignment:
Q  195 tgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    ||||||||||  |||  |||||||| |||||||| ||||||| || ||||||||||||| || ||||||    
T  35404809 tgggaatgttacgaggtaatgtaatattttgaggaaattcaaatactttgaggtgaattttactgtttg 35404741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 124; Significance: 1e-63; HSPs: 85)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 179 - 338
Target Start/End: Complemental strand, 10128133 - 10127974
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaat 278  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  10128133 agagtgtatttggatgggggaatgttttgagagaatgtaatgttttgagggaattcaactactttgagatgaattctattgtttgaatccacctcaaaat 10128034  T
Q  279 aattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacactat 338  Q
    |||| |||||| ||||||||||||||| | |||||||||| |||||||||||||||||||    
T  10128033 aattgaattccttcaaaacattacattacttcaaaatattcccccatccaaacacactat 10127974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 179 - 336
Target Start/End: Complemental strand, 15660342 - 15660185
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaat 278  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| ||||||||    
T  15660342 agagtgtgtttggatgagggaatgttttgagggaatgtaatgttttgagggaattcaactactttgagctgaattctattgtttgaatccatctcaaaat 15660243  T
Q  279 aattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||| |||||||||||||||||||||| |||||||||||| ||| |||||||||||||    
T  15660242 aattgaattccctcaaaacattacattacctcaaaatattcccctatccaaacacact 15660185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 177 - 339
Target Start/End: Original strand, 42844541 - 42844703
Alignment:
Q  177 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaa 276  Q
    ||||||||||| | |||| |||||||||||||| ||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||||| |||||    
T  42844541 taagagtgtgtatagatgggggaatgttttgagggaatgtaatattttgaaggaattcaactactttgaggtgaattctattgtttgaatccacttcaaa 42844640  T
Q  277 ataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacactata 339  Q
    |||||| | |||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  42844641 ataattgatttccctcaaaacattacattacctcaaaatatttccccatccaaacacactata 42844703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 181 - 336
Target Start/End: Original strand, 7352814 - 7352969
Alignment:
Q  181 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataa 280  Q
    |||||||||||||| |||||||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||| ||  ||||| ||     
T  7352814 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgatggaattcaactattttaaggtgaattctattgtttgaattcaattcaaagtag 7352913  T
Q  281 ttaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    || ||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  7352914 ttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacacact 7352969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 175 - 336
Target Start/End: Original strand, 28845867 - 28846028
Alignment:
Q  175 tctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctca 274  Q
    |||||||  |||||||||||  ||||||||||||| ||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||| || ||||    
T  28845867 tctaagaaagtgtttggatggaggaatgttttgagggaatgtaatgtttcgagggaattcaactactttaaggtgaattctattgtttgaattcaactca 28845966  T
Q  275 aaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    || || || |||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  28845967 aagtagttgaattccctcaaaacattatattccctcaaaacatttccccatccaaacacact 28846028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 179 - 336
Target Start/End: Original strand, 41498489 - 41498647
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgtttt-gagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaa 277  Q
    |||||||||||||||| |||| |||||||||||||  ||||||||| ||||||||||||| | ||| |||||||||||||||||| ||| ||||||||||    
T  41498489 agagtgtgtttggatgggggattgttttgagagaaaataatgtttttgagggaattcaaccactttaaggtgaattctattgtttaaattcacctcaaaa 41498588  T
Q  278 taattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    ||||| |||||| |||||||||||||||||||||||||||| | |||||||||||||||    
T  41498589 taattgaattccttcaaaacattacattccctcaaaatattcctccatccaaacacact 41498647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 206 - 336
Target Start/End: Original strand, 857266 - 857396
Alignment:
Q  206 tgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacattacatt 305  Q
    |||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| || |||||| || || ||||||||||||||||||||||    
T  857266 tgagggaatgtaatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcaactcaaagtagttgaattccctcaaaacattacatt 857365  T
Q  306 ccctcaaaatatttccccatccaaacacact 336  Q
    ||||||||| |||||||||||||||||||||    
T  857366 ccctcaaaacatttccccatccaaacacact 857396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 217 - 338
Target Start/End: Complemental strand, 26251030 - 26250909
Alignment:
Q  217 aatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaata 316  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||    
T  26251030 aatgttttgagggaattcaactactttgaggtgaattctattatttgaatccacctcaaaataattgaatttcctcaaaacattacattacctcaaaata 26250931  T
Q  317 tttccccatccaaacacactat 338  Q
    || || ||||||||||||||||    
T  26250930 ttccctcatccaaacacactat 26250909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 176 - 336
Target Start/End: Complemental strand, 7352974 - 7352814
Alignment:
Q  176 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaa 275  Q
    ||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||| |||||  ||||||| |    | |||| ||||| ||    
T  7352974 ctaagagtgtgtttggatggggaaatgttttgagggaatgtaatgttttgagggaattcaactactttgaattgaattcaaacaatagaattcaccttaa 7352875  T
Q  276 aataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||| || |||||| |||||||||||||||||||||||| ||| |||||||||||||||||    
T  7352874 aatagttgaattccatcaaaacattacattccctcaaaacattcccccatccaaacacact 7352814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 179 - 336
Target Start/End: Complemental strand, 1107211 - 1107053
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaat 278  Q
    ||||||| |||||||| |||||| ||||||| |||| |||||||||||||||||||||||| | | |||||||||||||||||||||| || |||||| |    
T  1107211 agagtgtatttggatgggggaatattttgagggaatataatgttttgagggaattcaactactctaaggtgaattctattgtttgaattcatctcaaagt 1107112  T
Q  279 aattaaattccctcaaaacattacattccc-tcaaaatatttccccatccaaacacact 336  Q
    | || |||||| |||||||||||||||||| | |||| |||||| ||||||||||||||    
T  1107111 agttgaattccttcaaaacattacattcccttaaaaaaatttcctcatccaaacacact 1107053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 172 - 336
Target Start/End: Complemental strand, 4896798 - 4896650
Alignment:
Q  172 ttctctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacc 271  Q
    |||||||| |||||||||||||| || ||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||                ||    
T  4896798 ttctctaatagtgtgtttggatggggaaatattttgagggaatgtaatgttttgagggaattcaactactttgaggtgaatt----------------cc 4896715  T
Q  272 tcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    ||||||||||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  4896714 tcaaaataattgaattccctcaaaacattacattacctcaaaatattcccccatccaaacacact 4896650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 217 - 336
Target Start/End: Complemental strand, 11041088 - 11040970
Alignment:
Q  217 aatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaata 316  Q
    ||||||||||||||||||||||| |||  |||||||||||||||||| || ||||||||| || || ||||| |||||||||||||||||||||||||||    
T  11041088 aatgttttgagggaattcaactactttatggtgaattctattgtttggattcacctcaaagtagttgaattctctcaaaacattacattccctcaaaata 11040989  T
Q  317 tttccccatccaaacacact 336  Q
     |||||||||||||||||||    
T  11040988 -ttccccatccaaacacact 11040970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 174 - 336
Target Start/End: Original strand, 15660178 - 15660340
Alignment:
Q  174 ctctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctc 273  Q
    ||||||||||||||||||||  |||||| |||||||  ||||||||||||||||||||||||| ||||||||| || |||| |    | |||| || |||    
T  15660178 ctctaagagtgtgtttggataggggaatattttgaggtaatgtaatgttttgagggaattcaattattttgagatggattcaaacaatagaattcagctc 15660277  T
Q  274 aaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    ||| || || ||||||||||||||||||||||||||||||| ||| || ||||||||||||||    
T  15660278 aaagtagttgaattccctcaaaacattacattccctcaaaacattccctcatccaaacacact 15660340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 179 - 276
Target Start/End: Original strand, 36455907 - 36456004
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaa 276  Q
    |||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||||| ||| |||||||||||||||||||||| |||||||||    
T  36455907 agagtgtgtttggatgggggaatgttttgagggaatctaatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcacctcaaa 36456004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 172 - 311
Target Start/End: Complemental strand, 857405 - 857266
Alignment:
Q  172 ttctctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacc 271  Q
    |||||| |||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||| |    | |||| ||||    
T  857405 ttctcttagagtgtgtttggatggggaaatgttttgagggaatgtaatgttttgagggaattcaactactttgagttgaattcaaacaatagaattcacc 857306  T
Q  272 tcaaaataattaaattccctcaaaacattacattccctca 311  Q
    | ||| || || ||||||||||||||||||||||||||||    
T  857305 ttaaagtagttgaattccctcaaaacattacattccctca 857266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 179 - 338
Target Start/End: Original strand, 4896648 - 4896791
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaat 278  Q
    |||||||||||||||| |||||| |||||||  ||||||||||||||||||||||||| ||||||||||                ||| ||||||||| |    
T  4896648 agagtgtgtttggatgggggaatattttgaggtaatgtaatgttttgagggaattcaattattttgagg----------------aattcacctcaaagt 4896731  T
Q  279 aattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacactat 338  Q
    | || |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4896732 agttgaattccctcaaaacattacattccctcaaaatatttccccatccaaacacactat 4896791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 179 - 333
Target Start/End: Complemental strand, 28846030 - 28845876
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaat 278  Q
    |||||||||||||||| || ||||||||||| |||| |||||||||||||||||||||||| |||||| ||||||| |    | |||| ||||| ||| |    
T  28846030 agagtgtgtttggatggggaaatgttttgagggaatataatgttttgagggaattcaactactttgagttgaattcaaacaatagaattcaccttaaagt 28845931  T
Q  279 aattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacac 333  Q
    | || ||||||||| ||||||||||||||||||||| ||| | ||||||||||||    
T  28845930 agttgaattccctcgaaacattacattccctcaaaacattcctccatccaaacac 28845876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 249 - 336
Target Start/End: Original strand, 49111382 - 49111469
Alignment:
Q  249 gaattctattgtttgaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  49111382 gaattctattgtttgaattcacctcaaaatagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacact 49111469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 179 - 254
Target Start/End: Complemental strand, 49111471 - 49111396
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattc 254  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  49111471 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactattttgaggtgaattc 49111396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 179 - 296
Target Start/End: Original strand, 14982280 - 14982396
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaat 278  Q
    ||||||||||||||||  ||||||||||||| ||||||||||||||||||||||| ||||| ||| ||||||||| |||| ||||||| ||||||||| |    
T  14982280 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaatttaactactttaaggtgaattttatt-tttgaattcacctcaaagt 14982378  T
Q  279 aattaaattccctcaaaa 296  Q
    | || |||||||||||||    
T  14982379 agttgaattccctcaaaa 14982396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 181 - 336
Target Start/End: Original strand, 10127976 - 10128131
Alignment:
Q  181 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataa 280  Q
    |||||||||||||| |||||| ||||||   ||||||||||||||| ||||||||| |||||||||||| |||| |    | |||| || |||||| ||     
T  10127976 agtgtgtttggatgggggaatattttgaagtaatgtaatgttttgaaggaattcaattattttgaggtggattcaaacaatagaattcatctcaaagtag 10128075  T
Q  281 ttaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    || ||||||||||||||||||||||| ||||||| ||| ||||||||||| |||||    
T  10128076 ttgaattccctcaaaacattacattctctcaaaacattcccccatccaaatacact 10128131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 176 - 336
Target Start/End: Original strand, 1107048 - 1107209
Alignment:
Q  176 ctaagagtgtgtttggatgtgggaatgttttga-gagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctca 274  Q
    ||||||||||||||||||| || ||| |||| | | |||||||||||||||| |||||||||||| |||||| ||||||| |    | |||| ||||| |    
T  1107048 ctaagagtgtgtttggatgaggaaatttttttaagggaatgtaatgttttgaaggaattcaactactttgagatgaattcaaacaatagaattcacctta 1107147  T
Q  275 aaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
     | || || |||||||||||||||||| |||||||||||||||| ||||||||||| |||||    
T  1107148 gagtagttgaattccctcaaaacattatattccctcaaaatattcccccatccaaatacact 1107209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 179 - 263
Target Start/End: Original strand, 31473849 - 31473933
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||| || ||||||||||||| |||||||||    
T  31473849 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtgaattttattgtttg 31473933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 176 - 253
Target Start/End: Original strand, 1112602 - 1112679
Alignment:
Q  176 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaatt 253  Q
    ||||||||||||||||||| ||||||||||||||  |||||||||||| ||||||||||||||| |||||||||||||    
T  1112602 ctaagagtgtgtttggatgggggaatgttttgaggaaatgtaatgtttcgagggaattcaactactttgaggtgaatt 1112679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 180 - 300
Target Start/End: Original strand, 4441338 - 4441449
Alignment:
Q  180 gagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaata 279  Q
    |||||||||||||||  ||||||||||||| |||||||||||||||||||||||||||         |||||||||||||||||||| ||||||||| ||    
T  4441338 gagtgtgtttggatggtggaatgttttgagggaatgtaatgttttgagggaattcaac---------gtgaattctattgtttgaattcacctcaaagta 4441428  T
Q  280 attaaattccctcaaaacatt 300  Q
     || |||| ||||||||||||    
T  4441429 gttgaatttcctcaaaacatt 4441449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 176 - 300
Target Start/End: Original strand, 26250906 - 26251030
Alignment:
Q  176 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaa 275  Q
    |||| |||||||||||||| |||||| |||||||  ||||||||||||||||| ||||||| |||||||||||| |||| | |  | |||| ||||||||    
T  26250906 ctaatagtgtgtttggatgagggaatattttgaggtaatgtaatgttttgaggaaattcaattattttgaggtggattcaaataatagaattcacctcaa 26251005  T
Q  276 aataattaaattccctcaaaacatt 300  Q
    | || || |||||||||||||||||    
T  26251006 agtagttgaattccctcaaaacatt 26251030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 173 - 257
Target Start/End: Complemental strand, 36456091 - 36456007
Alignment:
Q  173 tctctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctat 257  Q
    ||||||||||||||||||||||  ||||||||||||| ||||||||| |||||||| |||||||||| ||| |||||||||||||    
T  36456091 tctctaagagtgtgtttggatggaggaatgttttgagggaatgtaatattttgaggaaattcaactactttaaggtgaattctat 36456007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 181 - 336
Target Start/End: Complemental strand, 42844700 - 42844545
Alignment:
Q  181 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataa 280  Q
    |||||||||||||| || ||| |||||||  |||||||||||||||||||| |||| |||||||| ||| |||| |    | |||| ||||||||| ||     
T  42844700 agtgtgtttggatggggaaatattttgaggtaatgtaatgttttgagggaaatcaattattttgaagtggattcaaacaatagaattcacctcaaagtag 42844601  T
Q  281 ttaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    || |||||| |||||| ||||||||||||||||| ||| ||||||| | |||||||    
T  42844600 ttgaattccttcaaaatattacattccctcaaaacattcccccatctatacacact 42844545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 182 - 263
Target Start/End: Original strand, 10633035 - 10633116
Alignment:
Q  182 gtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    ||||||||||||| |||||||||||||| |||||||||||| ||||||||||||| || |||||||||||||  ||||||||    
T  10633035 gtgtgtttggatgggggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtgaatttcattgtttg 10633116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 179 - 263
Target Start/End: Original strand, 2125857 - 2125941
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||||||||||| |||||| ||||||| ||||||| |||||||||||||||||| || |||| ||||||||| ||||||||    
T  2125857 agagtgtgtttggatgggggaatattttgagggaatgtattgttttgagggaattcaaatactttggggtgaattccattgtttg 2125941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 177 - 253
Target Start/End: Complemental strand, 41498651 - 41498575
Alignment:
Q  177 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaatt 253  Q
    ||||||||||||||||||  ||||| ||||||| |||||||||||||||| ||||||||| ||||||||||||||||    
T  41498651 taagagtgtgtttggatggaggaatattttgagggaatgtaatgttttgaaggaattcaattattttgaggtgaatt 41498575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 221 - 336
Target Start/End: Complemental strand, 14982396 - 14982282
Alignment:
Q  221 ttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttc 320  Q
    ||||||||||||||||||| |||||||||||||| |   |   ||| ||||| ||| || |||||||||||||||||||||||||||||||||| ||| |    
T  14982396 ttttgagggaattcaactactttgaggtgaattcaaaaataa-aattcaccttaaagtagttaaattccctcaaaacattacattccctcaaaacattcc 14982298  T
Q  321 cccatccaaacacact 336  Q
     |||||||||||||||    
T  14982297 tccatccaaacacact 14982282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 174 - 252
Target Start/End: Original strand, 11040963 - 11041040
Alignment:
Q  174 ctctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaat 252  Q
    |||| |||||||||||||||| |||||| ||||||| ||||||||||||||||| ||||||||||| ||||||||||||    
T  11040963 ctcttagagtgtgtttggatg-gggaatattttgagggaatgtaatgttttgagagaattcaactactttgaggtgaat 11041040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 179 - 256
Target Start/End: Complemental strand, 1112781 - 1112704
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattcta 256  Q
    ||||| |||||||||| ||| ||||||||||  |||||||||||| ||||||||||||||| ||||||||||||||||    
T  1112781 agagtttgtttggatggggggatgttttgagcaaatgtaatgtttcgagggaattcaactactttgaggtgaattcta 1112704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 187 - 263
Target Start/End: Original strand, 1539649 - 1539725
Alignment:
Q  187 tttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    ||||||||  ||||||||||||| |||||||||||||||||||||||||| || |||||||||||||  ||||||||    
T  1539649 tttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaaatactttgaggtgaatttcattgtttg 1539725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 179 - 250
Target Start/End: Original strand, 5715744 - 5715815
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtga 250  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||| || ||||| ||||    
T  5715744 agagtgtgtttggatgagggaatgttttgagataatgtaatgttttgaggtaattcaaatactttgatgtga 5715815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 263 - 336
Target Start/End: Complemental strand, 2125932 - 2125859
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||| |||| |||| || || ||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  2125932 gaattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaatattcccccatccaaacacact 2125859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 179 - 248
Target Start/End: Complemental strand, 11348396 - 11348327
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggt 248  Q
    ||||||| |||||||| ||||||||||| || ||||||||||||||||||||||||||| | ||||||||    
T  11348396 agagtgtatttggatgggggaatgttttaagggaatgtaatgttttgagggaattcaacaactttgaggt 11348327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 217 - 285
Target Start/End: Complemental strand, 12914119 - 12914051
Alignment:
Q  217 aatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaa 285  Q
    ||||||||||||||||||||||||||| || |||||| |||||||||||| ||||||||| || |||||    
T  12914119 aatgttttgagggaattcaactattttaagatgaattttattgtttgaattcacctcaaagtagttaaa 12914051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 179 - 263
Target Start/End: Original strand, 16516171 - 16516255
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||||||||||| |||||||||||||  |||||||||||||||| |||||| || || ||||| ||||| || ||||||||    
T  16516171 agagtgtgtttggatgggggaatgttttgacggaatgtaatgttttgaaggaatttaaatactttgatgtgaactccattgtttg 16516255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 268 - 336
Target Start/End: Complemental strand, 31473919 - 31473851
Alignment:
Q  268 cacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    ||||||||| || || |||||||||| |||||||||||||||||||| ||| |||||||||||||||||    
T  31473919 cacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacacact 31473851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 269 - 337
Target Start/End: Complemental strand, 31742845 - 31742777
Alignment:
Q  269 acctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacacta 337  Q
    |||||||||||||| |||||||||||||||||||| | ||| |||||||| | ||||||||||||||||    
T  31742845 acctcaaaataattgaattccctcaaaacattacactaccttaaaatattcctccatccaaacacacta 31742777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 179 - 263
Target Start/End: Original strand, 35470122 - 35470206
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    ||||||||||| ||||  | ||||||||||| ||||||| |||||||||||||||||| || |||| ||||||||| ||||||||    
T  35470122 agagtgtgtttagatggtgaaatgttttgagggaatgtattgttttgagggaattcaaatactttggggtgaattccattgtttg 35470206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 268 - 335
Target Start/End: Complemental strand, 10633102 - 10633035
Alignment:
Q  268 cacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacac 335  Q
    ||||||||| || || |||||||||| |||||||||||||||||||| ||| ||||||||||||||||    
T  10633102 cacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacacac 10633035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 177 - 263
Target Start/End: Original strand, 41139473 - 41139557
Alignment:
Q  177 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||||||||||||| ||||| | ||||||  ||||||||||||||||| ||||||| || ||| |||||||||||||||||||    
T  41139473 taagagtgtgtttggatg-gggaa-gctttgaggtaatgtaatgttttgaggaaattcaaatacttttaggtgaattctattgtttg 41139557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 250 - 296
Target Start/End: Original strand, 46724195 - 46724241
Alignment:
Q  250 aattctattgtttgaatccacctcaaaataattaaattccctcaaaa 296  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||    
T  46724195 aattctattgtttgaatccacctcaaaataattgaattccctcaaaa 46724241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 179 - 261
Target Start/End: Complemental strand, 55266934 - 55266852
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtt 261  Q
    ||||||||||||||||   ||||||||||||  ||| |||| ||||||||||||||||||| ||| ||||||||| |||||||    
T  55266934 agagtgtgtttggatggatgaatgttttgaggaaatataatattttgagggaattcaactactttaaggtgaattttattgtt 55266852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 206 - 263
Target Start/End: Original strand, 29091164 - 29091221
Alignment:
Q  206 tgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||| |||||||||||||||||||||||||| || ||||| |||||||||||||||||    
T  29091164 tgagggaatgtaatgttttgagggaattcaaatactttgatgtgaattctattgtttg 29091221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 171 - 228
Target Start/End: Complemental strand, 31742931 - 31742874
Alignment:
Q  171 tttctctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagg 228  Q
    |||||| |||||||||||||||||  ||||||||||||| ||||||||||||||||||    
T  31742931 tttctcaaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagg 31742874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 268 - 336
Target Start/End: Complemental strand, 1112675 - 1112607
Alignment:
Q  268 cacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    ||||||||| || || ||||||||| |||||||||||| |||||||| ||| |||||||||||||||||    
T  1112675 cacctcaaagtagttgaattccctcgaaacattacatttcctcaaaacattcccccatccaaacacact 1112607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 4441391 - 4441339
Alignment:
Q  284 aattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    ||||||||||||||||||||||||||||||| ||| | |||||||||||||||    
T  4441391 aattccctcaaaacattacattccctcaaaacattccaccatccaaacacact 4441339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 272 - 336
Target Start/End: Complemental strand, 16516237 - 16516173
Alignment:
Q  272 tcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    ||||| || ||||||||| ||||||||||||||||| |||||| ||| |||||||||||||||||    
T  16516237 tcaaagtatttaaattccttcaaaacattacattccgtcaaaacattcccccatccaaacacact 16516173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 36455961 - 36455909
Alignment:
Q  284 aattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||||||||||||||||| |||||||||||| ||| |||||||||||||||||    
T  36455961 aattccctcaaaacattagattccctcaaaacattcccccatccaaacacact 36455909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 268 - 330
Target Start/End: Complemental strand, 1539711 - 1539649
Alignment:
Q  268 cacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaa 330  Q
    ||||||||| || || ||||||||||||||||||||||||||||||| ||| | |||||||||    
T  1539711 cacctcaaagtatttgaattccctcaaaacattacattccctcaaaacattcctccatccaaa 1539649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 284 - 338
Target Start/End: Original strand, 19461755 - 19461809
Alignment:
Q  284 aattccctcaaaacattacattccctcaaaatatttccccatccaaacacactat 338  Q
    ||||| |||||||||||||||| | |||||||||||||||||||||| |||||||    
T  19461755 aattcgctcaaaacattacattacttcaaaatatttccccatccaaaaacactat 19461809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 217 - 263
Target Start/End: Complemental strand, 53760825 - 53760779
Alignment:
Q  217 aatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||    
T  53760825 aatgttttgagggaattcaaatattttgatgtgaattctattgtttg 53760779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 263 - 336
Target Start/End: Complemental strand, 35470197 - 35470124
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||| |||| |||| || || ||||||||||||||| ||||||||||||||| ||||| ||||| |||||||||    
T  35470197 gaattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaacatttcaccatctaaacacact 35470124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 284 - 336
Target Start/End: Original strand, 11348342 - 11348394
Alignment:
Q  284 aattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||||||||||||||||||||||||| |||| ||| ||||||||||| |||||    
T  11348342 aattccctcaaaacattacattcccttaaaacattcccccatccaaatacact 11348394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 197 - 265
Target Start/End: Original strand, 12169037 - 12169104
Alignment:
Q  197 ggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaa 265  Q
    ||||||||||||| ||| |||||||||||||  |||||||||||||| | ||||||||| |||||||||    
T  12169037 ggaatgttttgagggaaagtaatgttttgaga-aattcaactattttaaagtgaattctgttgtttgaa 12169104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 211 - 263
Target Start/End: Original strand, 26534525 - 26534577
Alignment:
Q  211 gaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||||||||||||||||||||| || ||||  |||||||||||||||||    
T  26534525 gaatgtaatgttttgagggaattcaaatactttgttgtgaattctattgtttg 26534577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 303 - 339
Target Start/End: Original strand, 46724230 - 46724266
Alignment:
Q  303 attccctcaaaatatttccccatccaaacacactata 339  Q
    |||||||||||||||||||||||||||||||||||||    
T  46724230 attccctcaaaatatttccccatccaaacacactata 46724266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 177 - 253
Target Start/End: Original strand, 52493924 - 52493998
Alignment:
Q  177 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaatt 253  Q
    |||||||||||||||||| |||||||||||||   |||||||||||| ||||||||| || |||||| |||||||||    
T  52493924 taagagtgtgtttggatg-gggaatgttttgaagtaatgtaatgttt-gagggaattaaaatatttttaggtgaatt 52493998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 179 - 254
Target Start/End: Complemental strand, 467960 - 467887
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattc 254  Q
    |||||||||||||||| | |||||||||||  |||||||||||||||| |||||||||| | ||||| ||||||||    
T  467960 agagtgtgtttggatg-gagaatgttttgatggaatgtaatgttttga-ggaattcaaccactttgaagtgaattc 467887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 181 - 248
Target Start/End: Original strand, 31742778 - 31742845
Alignment:
Q  181 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggt 248  Q
    ||||||||||||||  ||||| |||| ||  | ||||||||||||||||||||||| |||||||||||    
T  31742778 agtgtgtttggatggaggaatattttaaggtagtgtaatgttttgagggaattcaattattttgaggt 31742845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 289 - 336
Target Start/End: Original strand, 31742874 - 31742921
Alignment:
Q  289 cctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||||||||||||||||||||||||| ||| | |||||||||||||||    
T  31742874 cctcaaaacattacattccctcaaaacattcctccatccaaacacact 31742921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 291 - 337
Target Start/End: Original strand, 42542979 - 42543025
Alignment:
Q  291 tcaaaacattacattccctcaaaatatttccccatccaaacacacta 337  Q
    |||||||||||||||||||||||| ||| | ||||||||||||||||    
T  42542979 tcaaaacattacattccctcaaaacattccaccatccaaacacacta 42543025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 263
Target Start/End: Original strand, 42775643 - 42775689
Alignment:
Q  217 aatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||||||||||||||| || |||||||||||||| ||||||||    
T  42775643 aatgttttgagggaattcaaatactttgaggtgaattccattgtttg 42775689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 217 - 262
Target Start/End: Complemental strand, 21012611 - 21012566
Alignment:
Q  217 aatgttttgagggaattcaactattttgaggtgaattctattgttt 262  Q
    ||||||||||||||||| || ||||||||||||||||| |||||||    
T  21012611 aatgttttgagggaatttaaatattttgaggtgaattccattgttt 21012566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 181 - 226
Target Start/End: Complemental strand, 42543024 - 42542979
Alignment:
Q  181 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttga 226  Q
    ||||||||||||||  ||||||||||||| ||||||||||||||||    
T  42543024 agtgtgtttggatggtggaatgttttgagggaatgtaatgttttga 42542979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 284 - 336
Target Start/End: Original strand, 36456031 - 36456083
Alignment:
Q  284 aattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||| |||||||| ||||||||||||||||| ||| | |||||||||||||||    
T  36456031 aatttcctcaaaatattacattccctcaaaacattcctccatccaaacacact 36456083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 211 - 262
Target Start/End: Complemental strand, 16300260 - 16300209
Alignment:
Q  211 gaatgtaatgttttgagggaattcaactattttgaggtgaattctattgttt 262  Q
    |||||||||||||||||  ||||||| || |||||||||||||| |||||||    
T  16300260 gaatgtaatgttttgagaaaattcaaatactttgaggtgaattccattgttt 16300209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 181 - 263
Target Start/End: Complemental strand, 19461807 - 19461725
Alignment:
Q  181 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    ||||| |||||||| || ||| ||||||   |||||||||||||||| |||||||| || |||||  | ||||||||||||||    
T  19461807 agtgtttttggatggggaaatattttgaagtaatgtaatgttttgagcgaattcaaataatttgatataaattctattgtttg 19461725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 263
Target Start/End: Original strand, 42776635 - 42776721
Alignment:
Q  177 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    ||||||||||||||||||   ||||||||| ||   |||||||||||||||  ||||||| || ||| |||||||||  ||||||||    
T  42776635 taagagtgtgtttggatggaagaatgtttttaggttatgtaatgttttgagtaaattcaaatacttttaggtgaatttcattgtttg 42776721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 336
Target Start/End: Original strand, 467879 - 467958
Alignment:
Q  255 tattgtttgaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||||||||||| ||| ||||| |  || |||||| ||||||||||||||||| |||||| | ||| |||||||||||||||    
T  467879 tattgtttgaattcacttcaaagtggttgaattcc-tcaaaacattacattccatcaaaaca-ttctccatccaaacacact 467958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 332
Target Start/End: Original strand, 1112706 - 1112775
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaaca 332  Q
    |||| ||||||||| || || ||||||||| ||||||||||||  ||||||| ||  |||||||||||||    
T  1112706 gaattcacctcaaagtagttgaattccctcgaaacattacatttgctcaaaacatccccccatccaaaca 1112775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 254
Target Start/End: Complemental strand, 4441449 - 4441412
Alignment:
Q  217 aatgttttgagggaattcaactattttgaggtgaattc 254  Q
    |||||||||||| |||||||||| ||||||||||||||    
T  4441449 aatgttttgaggaaattcaactactttgaggtgaattc 4441412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 198 - 255
Target Start/End: Original strand, 10354361 - 10354418
Alignment:
Q  198 gaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattct 255  Q
    ||||||||||||  ||||||||||||||||  |||| || ||||| ||||||||||||    
T  10354361 gaatgttttgaggtaatgtaatgttttgagaaaattgaaatatttggaggtgaattct 10354418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Complemental strand, 21012535 - 21012494
Alignment:
Q  212 aatgtaatgttttgagggaattcaactattttgaggtgaatt 253  Q
    ||||||||||| ||||||||||||| ||||||||||| ||||    
T  21012535 aatgtaatgttatgagggaattcaaatattttgaggtaaatt 21012494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 300
Target Start/End: Original strand, 21012574 - 21012611
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacatt 300  Q
    |||| |||||||||||| ||||||||||||||||||||    
T  21012574 gaattcacctcaaaatatttaaattccctcaaaacatt 21012611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 214
Target Start/End: Complemental strand, 46243148 - 46243115
Alignment:
Q  181 agtgtgtttggatgtgggaatgttttgagagaat 214  Q
    |||||||||||||| |||||||||||||||||||    
T  46243148 agtgtgtttggatgggggaatgttttgagagaat 46243115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 5715798 - 5715746
Alignment:
Q  284 aattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||| |||||||||||||||||  ||||||| ||| || ||||||||||||||    
T  5715798 aattacctcaaaacattacattatctcaaaacattccctcatccaaacacact 5715746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 263 - 311
Target Start/End: Complemental strand, 29091212 - 29091164
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctca 311  Q
    |||| ||| ||||| || || ||||||||||||||||||||||||||||    
T  29091212 gaattcacatcaaagtatttgaattccctcaaaacattacattccctca 29091164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 177 - 263
Target Start/End: Original strand, 31947588 - 31947675
Alignment:
Q  177 taagagtgtgtttggatgtgggaatgttttgagagaa---tgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    ||||||| |||||||||| | |||||||||||| |||   |||||||||  ||||||||||||  ||  |||||||||||| ||||||||    
T  31947588 taagagtatgtttggatgggagaatgttttgagggaatattgtaatgttacgagggaattcaa--atactgaggtgaattccattgtttg 31947675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 199 - 263
Target Start/End: Complemental strand, 46242597 - 46242533
Alignment:
Q  199 aatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||||||  ||| ||||||||||| |||||  || || |||||||||||||| ||||||||    
T  46242597 aatgttttgaggaaatataatgttttgaaggaatcaaaatactttgaggtgaattccattgtttg 46242533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 268 - 336
Target Start/End: Complemental strand, 52493994 - 52493928
Alignment:
Q  268 cacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    ||||| |||||| || |||||||||||| ||||||||| | |||||| ||| |||||||||||||||||    
T  52493994 cacctaaaaatattttaattccctcaaa-cattacattacttcaaaacatt-ccccatccaaacacact 52493928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 119; Significance: 1e-60; HSPs: 78)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 174 - 336
Target Start/End: Original strand, 5644672 - 5644834
Alignment:
Q  174 ctctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctc 273  Q
    ||||||||||||||||| |||  ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  5644672 ctctaagagtgtgtttgaatggaggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattctattgtttgaacccacctc 5644771  T
Q  274 aaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    ||||||||| |||||||||||||||||||||| ||||||||  || |||||||||||||||||    
T  5644772 aaaataattgaattccctcaaaacattacattacctcaaaacgttcccccatccaaacacact 5644834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 177 - 336
Target Start/End: Original strand, 29065817 - 29065976
Alignment:
Q  177 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaa 276  Q
    ||||||||||||||||||   |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  29065817 taagagtgtgtttggatggatgaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattctattgtttgaatccacctcaaa 29065916  T
Q  277 ataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||||| |||||||||||||||||||||| ||| |||| ||| | |||||||||||||||    
T  29065917 ataattgaattccctcaaaacattacattaccttaaaacattcctccatccaaacacact 29065976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 177 - 336
Target Start/End: Original strand, 40110735 - 40110895
Alignment:
Q  177 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattg-tttgaatccacctcaa 275  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||| ||||||||    
T  40110735 taagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttaaggtgaattctattgttttgaattcacctcaa 40110834  T
Q  276 aataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    | || || ||||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  40110835 agtagttgaattccctcaaaacattacattccctcgaaacatttccccatccaaacacact 40110895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 185 - 336
Target Start/End: Complemental strand, 21636038 - 21635887
Alignment:
Q  185 tgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaa 284  Q
    |||||||||| || ||||||||||| |||||||||||||||| |||||| ||||| |||||| ||||||||||||||||||||||||||||||||||| |    
T  21636038 tgtttggatggggaaatgttttgagggaatgtaatgttttgaaggaatttaactactttgagatgaattctattgtttgaatccacctcaaaataattga 21635939  T
Q  285 attccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    || |||||||||||||||||| ||||||||||||  ||||||||| ||||||    
T  21635938 atcccctcaaaacattacattacctcaaaatattctcccatccaagcacact 21635887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 171 - 336
Target Start/End: Complemental strand, 2057562 - 2057397
Alignment:
Q  171 tttctctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccac 270  Q
    ||||||| |||||||||||||||| |||||| ||||||| ||| ||||||||||||||||||||||||| ||  ||||||||| |||||||||||  |||    
T  2057562 tttctcttagagtgtgtttggatgggggaatattttgagggaaagtaatgttttgagggaattcaactacttcaaggtgaattttattgtttgaactcac 2057463  T
Q  271 ctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||||| || || ||||||||||||||||||||||| ||||||| ||| |||||||||||||||||    
T  2057462 ctcaaagtagttgaattccctcaaaacattacattcgctcaaaacattcccccatccaaacacact 2057397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 176 - 339
Target Start/End: Original strand, 43955514 - 43955674
Alignment:
Q  176 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaa 275  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||| || |||||||||   || |||| ||||| ||    
T  43955514 ctaagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttaagatgaattcta---ttagaatgcaccttaa 43955610  T
Q  276 aataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacactata 339  Q
    | || || ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  43955611 agtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactata 43955674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 211 - 339
Target Start/End: Original strand, 46069423 - 46069548
Alignment:
Q  211 gaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacattacattccctc 310  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||  ||||||||||| ||||    
T  46069423 gaatgtaatgttttgagggaattcaactactttgaggtgaattctattgtttgaatccatctcaaaataattgaattccctc--aacattacattacctc 46069520  T
Q  311 aaaatatttccccatccaaacacactata 339  Q
     ||||||| ||||||||||||||||||||    
T  46069521 -aaatattcccccatccaaacacactata 46069548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 176 - 336
Target Start/End: Original strand, 2057392 - 2057552
Alignment:
Q  176 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaa 275  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||| |    |  ||| |||||  |    
T  2057392 ctaagagtgtgtttggatgggggaatgttttgagcgaatgtaatgttttgagggaattcaactactttgaggtgagttcaaacaataaaattcaccttga 2057491  T
Q  276 aataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    | || || ||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  2057492 agtagttgaattccctcaaaacattactttccctcaaaatattcccccatccaaacacact 2057552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 176 - 336
Target Start/End: Complemental strand, 40110900 - 40110739
Alignment:
Q  176 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattc-tattgtttgaatccacctca 274  Q
    ||||||||||||||||||| || ||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||  |    | |||| ||||| |    
T  40110900 ctaagagtgtgtttggatggggaaatgtttcgagggaatgtaatgttttgagggaattcaactactttgaggtgaattcaaaacaatagaattcacctta 40110801  T
Q  275 aaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    || || || ||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  40110800 aagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacact 40110739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 181 - 336
Target Start/End: Complemental strand, 43955671 - 43955519
Alignment:
Q  181 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataa 280  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||| ||||| ||||||    | |||| || || ||| ||     
T  43955671 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttaaggtgcattcta---atagaattcatcttaaagtag 43955575  T
Q  281 ttaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    || ||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  43955574 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacact 43955519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 183 - 336
Target Start/End: Complemental strand, 49052937 - 49052788
Alignment:
Q  183 tgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataatt 282  Q
    |||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| || |||||| || ||    
T  49052937 tgtgtttggatg-gggaatgttt-gag-gaatgtaatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcaactcaaagtagtt 49052841  T
Q  283 aaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
     ||||| |||||||||||||||| |||||||| |||| | ||||||||||||||    
T  49052840 gaattcactcaaaacattacatt-cctcaaaacattttctcatccaaacacact 49052788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 179 - 336
Target Start/End: Complemental strand, 5644836 - 5644679
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaat 278  Q
    |||||||||||||||| ||||| ||||||||  ||||||||||||||||||||||||| ||||||||||||  ||| |    | |||| ||||||||| |    
T  5644836 agagtgtgtttggatgggggaacgttttgaggtaatgtaatgttttgagggaattcaattattttgaggtgggttcaaacaatagaattcacctcaaagt 5644737  T
Q  279 aattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    | || ||||||||||||||||||||||||||||||| ||| | |||| ||||||||||    
T  5644736 agttgaattccctcaaaacattacattccctcaaaacattcctccattcaaacacact 5644679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 179 - 336
Target Start/End: Complemental strand, 29065978 - 29065821
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaat 278  Q
    ||||||||||||||||  |||||||||| ||  ||||||||||||||||||||||||| |||||||||||| |||| |    | |||| ||||||||| |    
T  29065978 agagtgtgtttggatggaggaatgttttaaggtaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagt 29065879  T
Q  279 aattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    | || ||||||||||||||||||||||||||||||| |||   |||||||||||||||    
T  29065878 agttgaattccctcaaaacattacattccctcaaaacattcatccatccaaacacact 29065821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 175 - 336
Target Start/End: Original strand, 34388261 - 34388422
Alignment:
Q  175 tctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctca 274  Q
    |||||||||||||||||||| || ||| |||||||  || |||||||| |||| ||||||||||| ||| |||||||||| ||||||||||  |||||||    
T  34388261 tctaagagtgtgtttggatggggaaatattttgaggaaaagtaatgttctgagagaattcaactactttaaggtgaattccattgtttgaactcacctca 34388360  T
Q  275 aaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    || || || ||||||||||||| ||||||||||||||||| ||| |  ||| ||||||||||    
T  34388361 aagtagttgaattccctcaaaatattacattccctcaaaacattccatcattcaaacacact 34388422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 217 - 336
Target Start/End: Original strand, 40854007 - 40854127
Alignment:
Q  217 aatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaatt-ccctcaaaacattacattccctcaaaat 315  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||| || |||||| || || |||| ||||||||| |||||||||||||| ||     
T  40854007 aatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcaactcaaagtagttgaattcccctcaaaatattacattccctcagaac 40854106  T
Q  316 atttccccatccaaacacact 336  Q
    |||||||||||||||||||||    
T  40854107 atttccccatccaaacacact 40854127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 177 - 332
Target Start/End: Original strand, 21635883 - 21636038
Alignment:
Q  177 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaa 276  Q
    |||||||||| ||||||| | |||| |||||||  |||||||||||||||||| |||||| |||||||||||| |||| |    | |||| || ||||||    
T  21635883 taagagtgtgcttggatgggagaatattttgaggtaatgtaatgttttgaggggattcaattattttgaggtggattcaaacaatagaattcatctcaaa 21635982  T
Q  277 ataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaaca 332  Q
     || ||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  21635983 gtagttaaattccttcaaaacattacattccctcaaaacatttccccatccaaaca 21636038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 179 - 336
Target Start/End: Complemental strand, 34388424 - 34388267
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaat 278  Q
    |||||||||||| |||  ||||||||||||| ||||||||| ||||||||||||||||||| |||||||||| ||| |    | |||| ||||| ||| |    
T  34388424 agagtgtgtttgaatgatggaatgttttgagggaatgtaatattttgagggaattcaactactttgaggtgagttcaaacaatggaattcaccttaaagt 34388325  T
Q  279 aattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    | || ||||| |||| |||||||| || ||||||||||||||||||||||||||||||    
T  34388324 agttgaattctctcagaacattacttttcctcaaaatatttccccatccaaacacact 34388267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 211 - 336
Target Start/End: Complemental strand, 44915322 - 44915197
Alignment:
Q  211 gaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacattacattccctc 310  Q
    |||| |||||||||||||||||||||||| | | |||||||||||||||||||||| ||||||||| || || |||||| |||||||||||| |||||||    
T  44915322 gaatttaatgttttgagggaattcaactactctaaggtgaattctattgtttgaattcacctcaaagtagttgaattccttcaaaacattacgttccctc 44915223  T
Q  311 aaaatatttccccatccaaacacact 336  Q
    |||| |||  | ||||||||||||||    
T  44915222 aaaaaattctctcatccaaacacact 44915197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 175 - 266
Target Start/End: Original strand, 31632718 - 31632809
Alignment:
Q  175 tctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaat 266  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||| || |||||||||||||| |||||||||||    
T  31632718 tctaagagtgtgtttggatgggggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtgaattccattgtttgaat 31632809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 174 - 336
Target Start/End: Original strand, 46481941 - 46482102
Alignment:
Q  174 ctctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctc 273  Q
    ||||||||||||||||||||| |  ||| ||| || ||||||||||||||||||| |||| ||||||||  || ||||||||||||||||||| || |||    
T  46481941 ctctaagagtgtgtttggatgggaaaatatttcgaaagaatgtaatgttttgaggaaatttaactatttgaagatgaattctattgtttgaattcaactc 46482040  T
Q  274 aaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
     ||||| || ||||  |||||||||||||||||| |||| | ||||| |||| ||||||||||    
T  46482041 -aaatagttgaattttctcaaaacattacattccttcaacacatttctccattcaaacacact 46482102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 174 - 263
Target Start/End: Complemental strand, 35777019 - 35776930
Alignment:
Q  174 ctctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||| || |||||||||||||| ||| ||||    
T  35777019 ctctaagagtgtgtttggatgagggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtgaattccattatttg 35776930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 179 - 263
Target Start/End: Complemental strand, 26162196 - 26162112
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||| || |||||||||||||| ||||||||    
T  26162196 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtgaattccattgtttg 26162112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 174 - 263
Target Start/End: Complemental strand, 28539232 - 28539143
Alignment:
Q  174 ctctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||| |||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||| || |||| ||||||||| ||||||||    
T  28539232 ctcttagagtgtgtttggatgggggaatgttttgagggaatgtattgttttgagggaattcaaatactttggggtgaattccattgtttg 28539143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 172 - 263
Target Start/End: Complemental strand, 29639281 - 29639190
Alignment:
Q  172 ttctctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||| ||||||||||| |||||| ||||||||||| || |||||||||||| ||||| ||||||| ||||||||||||||||| ||||||||    
T  29639281 ttctttaagagtgtgtatggatgggggaatgttttcagggaatgtaatgttatgaggaaattcaaatattttgaggtgaattccattgtttg 29639190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 177 - 263
Target Start/End: Complemental strand, 25189287 - 25189201
Alignment:
Q  177 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||||||||||||||||||||||||||||  |||| |||||||||||||||||||| || ||||| |||||||  ||||||||    
T  25189287 taagagtgtgtttggatgtgggaatgttttgaggtaatgcaatgttttgagggaattcaaatactttgaagtgaatttcattgtttg 25189201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 177 - 263
Target Start/End: Complemental strand, 39342703 - 39342617
Alignment:
Q  177 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||||||||||||| |||||||||||||| ||||||| |||||| ||||||||||| || |||| ||||||||| ||||||||    
T  39342703 taagagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttggggtgaattccattgtttg 39342617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 177 - 307
Target Start/End: Original strand, 49052784 - 49052913
Alignment:
Q  177 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaa 276  Q
    |||||||||||||||||| |  ||||||||||| ||||||||||||||||| ||||||||||| |||||| ||||||| |    | |||| ||||| |||    
T  49052784 taagagtgtgtttggatgagaaaatgttttgag-gaatgtaatgttttgagtgaattcaactactttgagttgaattcaaacaatagaattcaccttaaa 49052882  T
Q  277 ataattaaattccctcaaaacattacattcc 307  Q
     || || ||||||||||||||||||||||||    
T  49052883 gtagttgaattccctcaaaacattacattcc 49052913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 174 - 263
Target Start/End: Complemental strand, 6498829 - 6498740
Alignment:
Q  174 ctctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||| ||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||| || ||||| |||||| | ||||||||    
T  6498829 ctcttagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaaatactttgatgtgaataccattgtttg 6498740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 174 - 263
Target Start/End: Complemental strand, 14603326 - 14603237
Alignment:
Q  174 ctctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    ||||||||||||||||||||| |||||||||||||| ||||||| |||||| ||||||||||| || |||| ||| ||||| ||||||||    
T  14603326 ctctaagagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttggggtaaattccattgtttg 14603237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 183 - 263
Target Start/End: Complemental strand, 23455302 - 23455222
Alignment:
Q  183 tgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||||||| |||||||||||||| ||||||| |||||||||||||||||| || |||| ||||||||| ||||||||    
T  23455302 tgtgtttggatgagggaatgttttgagggaatgtattgttttgagggaattcaaatactttggggtgaattccattgtttg 23455222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 176 - 308
Target Start/End: Original strand, 44915192 - 44915324
Alignment:
Q  176 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaa 275  Q
    ||||||||||||||||||| | |||| ||||||| ||| |||||||||||| |||||||||||| |||||||||||||| |    | |||| ||||| |     
T  44915192 ctaagagtgtgtttggatgagagaattttttgagggaacgtaatgttttgaaggaattcaactactttgaggtgaattcaaacaatagaattcaccttag 44915291  T
Q  276 aataattaaattccctcaaaacattacattccc 308  Q
    | || || |||||||||||||||||| ||||||    
T  44915292 agtagttgaattccctcaaaacattaaattccc 44915324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 179 - 248
Target Start/End: Complemental strand, 34399008 - 34398938
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagg-gaattcaactattttgaggt 248  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||| ||||||||    
T  34399008 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaggtgaattcaactactttgaggt 34398938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 179 - 263
Target Start/End: Complemental strand, 18789305 - 18789221
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    ||||||||||||||||  ||||| |||||||||||| ||||||| ||||||||||||| || ||| |||||||||| ||||||||    
T  18789305 agagtgtgtttggatggaggaatattttgagagaatataatgttatgagggaattcaaatactttaaggtgaattccattgtttg 18789221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 179 - 263
Target Start/End: Complemental strand, 23548670 - 23548586
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    ||||||||||||||||  ||||||||||||| ||||||| |||||||||| ||||||| || |||| ||||||||| ||||||||    
T  23548670 agagtgtgtttggatggaggaatgttttgagggaatgtattgttttgaggaaattcaaatactttggggtgaattccattgtttg 23548586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 179 - 263
Target Start/End: Original strand, 35455804 - 35455888
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||||||||||| |||||||||||||| ||||||| |||||| ||||||||||| || |||| ||| ||||| ||||||||    
T  35455804 agagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttggggtaaattccattgtttg 35455888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 180 - 263
Target Start/End: Complemental strand, 9784989 - 9784906
Alignment:
Q  180 gagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||||||||||  ||||||||||||| ||||||| |||||||||||||||||| || |||| |||||| || ||||||||    
T  9784989 gagtgtgtttggatggaggaatgttttgagggaatgtattgttttgagggaattcaaatactttggggtgaaatccattgtttg 9784906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 174 - 336
Target Start/End: Complemental strand, 46482109 - 46481948
Alignment:
Q  174 ctctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctc 273  Q
    |||| |||||||||||| |||  | ||||| ||||  |||||||||||||||||  ||||||||||||| ||| ||||||| |    | |||| || ||     
T  46482109 ctcttagagtgtgtttgaatggagaaatgtgttgaaggaatgtaatgttttgagaaaattcaactattt-gagttgaattcaaacaatagaattcatctt 46482011  T
Q  274 aaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
     ||||| ||||||| ||||||||||||||||||  || |||||||| ||||||||||||||||    
T  46482010 caaatagttaaatttcctcaaaacattacattctttcgaaatattttcccatccaaacacact 46481948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 263 - 336
Target Start/End: Original strand, 26162121 - 26162194
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||| ||||||||| || || |||||||||| |||||||||||||||||||| ||| |||||||||||||||||    
T  26162121 gaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacacact 26162194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 263 - 336
Target Start/End: Complemental strand, 31632797 - 31632724
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||| ||||||||| || || |||||||||| |||||||||||||||||||| ||| |||||||||||||||||    
T  31632797 gaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacacact 31632724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 176 - 300
Target Start/End: Complemental strand, 40854132 - 40854007
Alignment:
Q  176 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttga-gggaattcaactattttgaggtgaattctattgtttgaatccacctca 274  Q
    ||||||||||||||||||| || |||||| |||| ||||||||| |||||| ||||||||||||| |||||| ||||||| |    | |||| ||||| |    
T  40854132 ctaagagtgtgtttggatggggaaatgttctgagggaatgtaatattttgaggggaattcaactactttgagttgaattcaaacaatagaattcacctta 40854033  T
Q  275 aaataattaaattccctcaaaacatt 300  Q
    || || || |||||||||||||||||    
T  40854032 aagtagttgaattccctcaaaacatt 40854007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 181 - 263
Target Start/End: Complemental strand, 22391644 - 22391562
Alignment:
Q  181 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||||| ||| |  ||||||||||| ||||||||||||||||| ||||| || ||||||||||||||||  ||||||||    
T  22391644 agtgtgtttgaatgagataatgttttgagggaatgtaatgttttgagagaatttaaatattttgaggtgaatttcattgtttg 22391562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 263 - 336
Target Start/End: Original strand, 28539152 - 28539225
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||| |||| |||| || || ||||||||||||||| ||||||||||||||| ||| |||||||||||||||||    
T  28539152 gaattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaacattcccccatccaaacacact 28539225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 263 - 336
Target Start/End: Original strand, 35776939 - 35777012
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||| ||||||||| || || |||||||||| |||||||||||||||||||| ||| || ||||||||||||||    
T  35776939 gaattcacctcaaagtatttgaattccctcataacattacattccctcaaaacattccctcatccaaacacact 35777012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 284 - 336
Target Start/End: Original strand, 6498770 - 6498822
Alignment:
Q  284 aattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    ||||||||||||||||||||||||||||||| ||| | |||||||||||||||    
T  6498770 aattccctcaaaacattacattccctcaaaacattcctccatccaaacacact 6498822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 268 - 336
Target Start/End: Original strand, 22391576 - 22391644
Alignment:
Q  268 cacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||| |||  | ||| ||||||||||    
T  22391576 cacctcaaaatatttaaattctctcaaaacattacattccctcaaaacattatctcattcaaacacact 22391644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 269 - 336
Target Start/End: Original strand, 34398938 - 34399006
Alignment:
Q  269 acctcaaaataattaaattc-cctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||||||| || || ||||| |||||||||||||||||||||||||| ||| |||||||||||||||||    
T  34398938 acctcaaagtagttgaattcacctcaaaacattacattccctcaaaacattcccccatccaaacacact 34399006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 181 - 308
Target Start/End: Complemental strand, 46069545 - 46069421
Alignment:
Q  181 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataa 280  Q
    |||||||||||||| |||||| ||| |||  |||||||||||  |||||||||||| ||||||||| || |||| |    | |||| ||||||||| ||     
T  46069545 agtgtgtttggatgggggaatattt-gaggtaatgtaatgtt--gagggaattcaattattttgagatggattcaaacaatagaattcacctcaaagtag 46069449  T
Q  281 ttaaattccctcaaaacattacattccc 308  Q
    || |||||||||||||||||||||||||    
T  46069448 ttgaattccctcaaaacattacattccc 46069421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 177 - 263
Target Start/End: Original strand, 30524253 - 30524339
Alignment:
Q  177 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    ||||||||||| ||||||  | ||||||||||  |||||||||||||||||||||||||| || |||| | ||||||  ||||||||    
T  30524253 taagagtgtgtatggatggagtaatgttttgaaggaatgtaatgttttgagggaattcaaatactttgggatgaatttcattgtttg 30524339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 205 - 263
Target Start/End: Original strand, 43791116 - 43791174
Alignment:
Q  205 ttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    ||||| |||||||||||||||||||||||||| || ||||||||||| || ||||||||    
T  43791116 ttgagggaatgtaatgttttgagggaattcaaatactttgaggtgaactccattgtttg 43791174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 263 - 336
Target Start/End: Original strand, 29639199 - 29639272
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||| |||||||||||| || |||| ||||| ||||||||||||||| |||| ||| ||||||||| |||||||    
T  29639199 gaattcacctcaaaatatttgaatttcctcataacattacattccctgaaaacattcccccatccatacacact 29639272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 263 - 336
Target Start/End: Original strand, 39342626 - 39342699
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||| |||| |||| || || |||||||| |||||| ||||||||||||||| ||| |||||||||||||||||    
T  39342626 gaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacact 39342699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 284 - 336
Target Start/End: Original strand, 9784936 - 9784988
Alignment:
Q  284 aattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    ||||||||||||||| ||||||||||||||| ||| | |||||||||||||||    
T  9784936 aattccctcaaaacaatacattccctcaaaacattcctccatccaaacacact 9784988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 284 - 336
Target Start/End: Original strand, 14603267 - 14603319
Alignment:
Q  284 aattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||||||| |||||| ||||||||||||||| ||| |||||||||||||||||    
T  14603267 aattcccttaaaacaatacattccctcaaaacattcccccatccaaacacact 14603319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 206 - 262
Target Start/End: Original strand, 18789544 - 18789600
Alignment:
Q  206 tgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgttt 262  Q
    |||||||||||||||||  |||||||||||| || |||||||||||||| |||||||    
T  18789544 tgagagaatgtaatgttacgagggaattcaaatactttgaggtgaattccattgttt 18789600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 183 - 263
Target Start/End: Original strand, 30629061 - 30629141
Alignment:
Q  183 tgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||||||| |||||||||||||| ||||||| |||||| || ||||| || || |||| ||||||||  ||||||||    
T  30629061 tgtgtttggatgggggaatgttttgagggaatgtattgttttaagagaatttaaatactttggggtgaatttcattgtttg 30629141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 35455858 - 35455806
Alignment:
Q  284 aattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||||||| |||||| ||||||||||||||| ||| |||||||||||||||||    
T  35455858 aattcccttaaaacaatacattccctcaaaacattcccccatccaaacacact 35455806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 263 - 334
Target Start/End: Original strand, 23455231 - 23455302
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacaca 334  Q
    |||| |||| |||| || || ||||||||||||||| ||||||||||||||| ||| || ||||||||||||    
T  23455231 gaattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaacattccctcatccaaacaca 23455302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 281 - 336
Target Start/End: Complemental strand, 29195766 - 29195711
Alignment:
Q  281 ttaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    ||||||||  ||||||||||||||| |||||||||||| | |||||||||||||||    
T  29195766 ttaaattctttcaaaacattacattacctcaaaatattcctccatccaaacacact 29195711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 334
Target Start/End: Complemental strand, 30629127 - 30629061
Alignment:
Q  268 cacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacaca 334  Q
    |||| |||| || |||||||| || |||||| ||||||||||||||| ||| |||||||||||||||    
T  30629127 caccccaaagtatttaaattctcttaaaacaatacattccctcaaaacattcccccatccaaacaca 30629061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 263
Target Start/End: Original strand, 32650611 - 32650657
Alignment:
Q  217 aatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||||||||||||||| || ||||||||||||| |||||||||    
T  32650611 aatgttttgagggaattcaaatactttgaggtgaattttattgtttg 32650657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 263
Target Start/End: Original strand, 40495755 - 40495801
Alignment:
Q  217 aatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||||||||||||||| ||||||| ||||||||| ||||||||    
T  40495755 aatgttttgagggaattcaaatattttggggtgaattccattgtttg 40495801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 198 - 263
Target Start/End: Complemental strand, 3905699 - 3905634
Alignment:
Q  198 gaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    ||||||||||||  ||  ||||||||| | ||||||||| || |||||||||||||||||||||||    
T  3905699 gaatgttttgaggaaaaataatgttttcaaggaattcaaatactttgaggtgaattctattgtttg 3905634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 263 - 336
Target Start/End: Original strand, 18789230 - 18789303
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||| ||||| ||| || || |||||||||| ||||||| |||| ||||||||||| | |||||||||||||||    
T  18789230 gaattcaccttaaagtatttgaattccctcataacattatattctctcaaaatattcctccatccaaacacact 18789303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 263 - 336
Target Start/End: Original strand, 23548595 - 23548668
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||| |||| |||| || || |||| |||||||||| ||||||||||||||| ||| | |||||||||||||||    
T  23548595 gaattcaccccaaagtatttgaatttcctcaaaacaatacattccctcaaaacattcctccatccaaacacact 23548668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 217 - 277
Target Start/End: Original strand, 31913256 - 31913316
Alignment:
Q  217 aatgttttgagggaattcaactattttgaggtg-aattctattgtttgaatccacctcaaaa 277  Q
    ||||||||||||||||||||||| ||| ||||| |||||||||||||||||  |||||||||    
T  31913256 aatgttttgagggaattcaacta-tttaaggtgaaattctattgtttgaatttacctcaaaa 31913316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 284 - 336
Target Start/End: Original strand, 25189231 - 25189283
Alignment:
Q  284 aattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    ||||||||||||||||| |||| |||||||| ||| || ||||||||||||||    
T  25189231 aattccctcaaaacattgcattacctcaaaacattcccacatccaaacacact 25189283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 30524309 - 30524257
Alignment:
Q  284 aattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||||||||||||||||||||||| |||||| ||| | ||||||| |||||||    
T  30524309 aattccctcaaaacattacattccttcaaaacattactccatccatacacact 30524257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 268 - 312
Target Start/End: Complemental strand, 43791160 - 43791116
Alignment:
Q  268 cacctcaaaataattaaattccctcaaaacattacattccctcaa 312  Q
    ||||||||| || || |||||||||||||||||||||||||||||    
T  43791160 cacctcaaagtatttgaattccctcaaaacattacattccctcaa 43791116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 263
Target Start/End: Original strand, 14790151 - 14790197
Alignment:
Q  217 aatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||||||||||||||| || ||||||||||||| |||| ||||    
T  14790151 aatgttttgagggaattcaaatactttgaggtgaattttattatttg 14790197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 263
Target Start/End: Original strand, 45984378 - 45984424
Alignment:
Q  217 aatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||| ||||||||||| || |||||||||||||| ||||||||    
T  45984378 aatgttttaagggaattcaaatactttgaggtgaattcaattgtttg 45984424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 263
Target Start/End: Original strand, 45988738 - 45988784
Alignment:
Q  217 aatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||| ||||||||||| || |||||||||||||| ||||||||    
T  45988738 aatgttttaagggaattcaaatactttgaggtgaattcaattgtttg 45988784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 287 - 336
Target Start/End: Original strand, 18926812 - 18926861
Alignment:
Q  287 tccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    ||||||||||||||||||| ||||||||| |  ||||||| |||||||||    
T  18926812 tccctcaaaacattacattacctcaaaatgtccccccatcaaaacacact 18926861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 19865602 - 19865565
Alignment:
Q  172 ttctctaagagtgtgtttggatgtgggaatgttttgag 209  Q
    |||||| |||||||||||||||| ||||||||||||||    
T  19865602 ttctctgagagtgtgtttggatgagggaatgttttgag 19865565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 29195707 - 29195756
Alignment:
Q  177 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttga 226  Q
    ||||||||||||||||||  ||||| |||||||  |||||||||||||||    
T  29195707 taagagtgtgtttggatggaggaatattttgaggtaatgtaatgttttga 29195756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 176 - 209
Target Start/End: Complemental strand, 30080845 - 30080812
Alignment:
Q  176 ctaagagtgtgtttggatgtgggaatgttttgag 209  Q
    ||||||||||||||||||| ||||||||||||||    
T  30080845 ctaagagtgtgtttggatgggggaatgttttgag 30080812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 214
Target Start/End: Original strand, 31913234 - 31913271
Alignment:
Q  177 taagagtgtgtttggatgtgggaatgttttgagagaat 214  Q
    |||||||||||||||||| |||||||||||||| ||||    
T  31913234 taagagtgtgtttggatgggggaatgttttgagggaat 31913271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 236
Target Start/End: Complemental strand, 22351922 - 22351874
Alignment:
Q  188 ttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaa 236  Q
    ||||||| |||||||||||| |  |||||||||||||||| ||||||||    
T  22351922 ttggatgggggaatgttttggggtaatgtaatgttttgagagaattcaa 22351874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 214
Target Start/End: Complemental strand, 30587949 - 30587909
Alignment:
Q  174 ctctaagagtgtgtttggatgtgggaatgttttgagagaat 214  Q
    ||||| ||||||||||||||| |||||||||||||| ||||    
T  30587949 ctctaggagtgtgtttggatgggggaatgttttgagggaat 30587909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 116; Significance: 7e-59; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 181 - 336
Target Start/End: Original strand, 9763014 - 9763169
Alignment:
Q  181 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataa 280  Q
    |||||||||||| | || ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  9763014 agtgtgtttggaaggggaaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattctattgtttgaatccacctcacaataa 9763113  T
Q  281 ttaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    || |||||||||||||||||||||| |||||||||||| | |||||||||||||||    
T  9763114 ttgaattccctcaaaacattacattacctcaaaatattcctccatccaaacacact 9763169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 176 - 337
Target Start/End: Complemental strand, 6919869 - 6919709
Alignment:
Q  176 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaa 275  Q
    ||||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||| ||||  |||||||||||||||||||||| ||||||||    
T  6919869 ctaagagtgtgtttggatgggggaatgttttgagggaaagtaatgttttgagggaattcaaccattta-aggtgaattctattgtttgaattcacctcaa 6919771  T
Q  276 aataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacacta 337  Q
    | || || ||||||||||||||||||||||||||||||  ||| | ||||||||||||||||    
T  6919770 agtagttgaattccctcaaaacattacattccctcaaaccattcctccatccaaacacacta 6919709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 179 - 300
Target Start/End: Original strand, 9285647 - 9285768
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaat 278  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| || |||||| |    
T  9285647 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgagctgaattctattgtttgaattcatctcaaagt 9285746  T
Q  279 aattaaattccctcaaaacatt 300  Q
    | || |||||||||||||||||    
T  9285747 agttgaattccctcaaaacatt 9285768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 176 - 336
Target Start/End: Complemental strand, 776242 - 776082
Alignment:
Q  176 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaa 275  Q
    ||||||||||||||||||  |  ||||||||||| |||||||||||||||||| |||||||||| ||| ||||||||||||||||||||||  | || ||    
T  776242 ctaagagtgtgtttggataggaaaatgttttgagggaatgtaatgttttgaggaaattcaactactttaaggtgaattctattgtttgaatttaacttaa 776143  T
Q  276 aataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    | || || |||| |||||||||||||||||||||||||| ||||| ||||| |||||||||    
T  776142 agtagttgaatttcctcaaaacattacattccctcaaaacatttctccatctaaacacact 776082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 177 - 339
Target Start/End: Complemental strand, 9763173 - 9763011
Alignment:
Q  177 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaa 276  Q
    ||||||||||||||||||  ||||| |||||||  ||||||||||||||||||||||||| |||| ||||||| |||| |    | |||| |||||||||    
T  9763173 taagagtgtgtttggatggaggaatattttgaggtaatgtaatgttttgagggaattcaattattgtgaggtggattcaaacaatagaattcacctcaaa 9763074  T
Q  277 ataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacactata 339  Q
     || || ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  9763073 gtagttgaattccctcaaaacattacattccctcaaaacatttccccttccaaacacactata 9763011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 181 - 336
Target Start/End: Original strand, 6919710 - 6919864
Alignment:
Q  181 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataa 280  Q
    ||||||||||||||  |||||| |||||| ||||||||||||||||||||||||||||| |||||||||||||| |    | |||| |||||  ||||      
T  6919710 agtgtgtttggatggaggaatggtttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcacct-taaatgg 6919808  T
Q  281 ttaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    || ||||||||||||||||||| ||||||||||| ||| |||||||||||||||||    
T  6919809 ttgaattccctcaaaacattactttccctcaaaacattcccccatccaaacacact 6919864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 179 - 263
Target Start/End: Original strand, 1368477 - 1368561
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    ||||||||||||||||  ||||||||||||||||||||||| |||| ||||||||||| | ||||||||||||||||||||||||    
T  1368477 agagtgtgtttggatggaggaatgttttgagagaatgtaatattttaagggaattcaaatgttttgaggtgaattctattgtttg 1368561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 217 - 336
Target Start/End: Complemental strand, 9285768 - 9285649
Alignment:
Q  217 aatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaata 316  Q
    ||||||||||||||||||||||| |||||| ||||||| |    | |||| || |||||| || || ||||||||||||||||||||||||||||||| |    
T  9285768 aatgttttgagggaattcaactactttgagatgaattcaaacaatagaattcagctcaaagtagttgaattccctcaaaacattacattccctcaaaaca 9285669  T
Q  317 tttccccatccaaacacact 336  Q
    || |||||||||||||||||    
T  9285668 ttcccccatccaaacacact 9285649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 179 - 336
Target Start/End: Original strand, 776080 - 776237
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaat 278  Q
    ||||||||||| ||||  | ||||||||||| |||||||||||||||||| |||||||||| ||| || | ||||| |    | |||| ||||| ||| |    
T  776080 agagtgtgtttagatggagaaatgttttgagggaatgtaatgttttgaggaaattcaactactttaagttaaattcaaacaatagaattcaccttaaagt 776179  T
Q  279 aattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    | || |||| |||||||||||||||||||||||||| |||| || |||||||||||||    
T  776180 agttgaatttcctcaaaacattacattccctcaaaacattttcctatccaaacacact 776237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 179 - 263
Target Start/End: Complemental strand, 34245053 - 34244969
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    ||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||| || ||||| || ||||| ||||||||    
T  34245053 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaaatactttgatgtaaattccattgtttg 34244969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 176 - 239
Target Start/End: Complemental strand, 8574827 - 8574764
Alignment:
Q  176 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaacta 239  Q
    ||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||||||    
T  8574827 ctaagagtgtgtttggatggggaaatgttttgagtgaatgtaatgttttgagggaattcaacta 8574764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 176 - 263
Target Start/End: Original strand, 28918162 - 28918249
Alignment:
Q  176 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||||||||||||||  ||||||||||||| |||||||||||||| ||| ||||||| || |||||||||||||  ||||||||    
T  28918162 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttaaggaaattcaaatactttgaggtgaatttcattgtttg 28918249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 183 - 253
Target Start/End: Complemental strand, 15299579 - 15299510
Alignment:
Q  183 tgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaatt 253  Q
    |||||||||||| |||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||    
T  15299579 tgtgtttggatg-gggaatgttttgagggaatgtaatgttttgaaggaattcaactactttgaggtgaatt 15299510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 179 - 239
Target Start/End: Original strand, 8574695 - 8574755
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaacta 239  Q
    |||||||||||||||| || ||||||||||| |||||||||||||||||||||||||||||    
T  8574695 agagtgtgtttggatggggaaatgttttgagtgaatgtaatgttttgagggaattcaacta 8574755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 179 - 263
Target Start/End: Original strand, 13487275 - 13487359
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    ||||||||||| |||| |||||||||||||| ||||||| |||| ||||||||||||| || |||||||||||||  ||||||||    
T  13487275 agagtgtgtttagatgggggaatgttttgagggaatgtagtgttatgagggaattcaaatactttgaggtgaatttcattgtttg 13487359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 179 - 263
Target Start/End: Complemental strand, 29889507 - 29889423
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    ||||||||||||||||  ||||||||||||  |||||||||||||||||||||||||| || ||||| |||||||| ||| ||||    
T  29889507 agagtgtgtttggatggaggaatgttttgatggaatgtaatgttttgagggaattcaaatactttgatgtgaattccattatttg 29889423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 8574749 - 8574697
Alignment:
Q  284 aattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  8574749 aattccctcaaaacattacattcactcaaaacatttccccatccaaacacact 8574697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 284 - 336
Target Start/End: Original strand, 8574770 - 8574822
Alignment:
Q  284 aattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  8574770 aattccctcaaaacattacattcactcaaaacatttccccatccaaacacact 8574822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 197 - 251
Target Start/End: Original strand, 15299417 - 15299471
Alignment:
Q  197 ggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaa 251  Q
    ||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||    
T  15299417 ggaatgttttgagcgaatgtaatgttttgagagaattcaactactttgaggtgaa 15299471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 284 - 336
Target Start/End: Original strand, 34244999 - 34245051
Alignment:
Q  284 aattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    ||||||||||||||||||||||||||||||| ||| | |||||||||||||||    
T  34244999 aattccctcaaaacattacattccctcaaaacattcctccatccaaacacact 34245051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 268 - 334
Target Start/End: Original strand, 15299514 - 15299579
Alignment:
Q  268 cacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacaca 334  Q
    ||||||||| || || |||||| |||||||||||||||||||||||| | |||||||||||||||||    
T  15299514 cacctcaaagtagttgaattccttcaaaacattacattccctcaaaaca-ttccccatccaaacaca 15299579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 263 - 336
Target Start/End: Original strand, 29889432 - 29889505
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||| ||| ||||| || || |||||||||||||||||||||||| |||||| ||| | |||||||||||||||    
T  29889432 gaattcacatcaaagtatttgaattccctcaaaacattacattccatcaaaacattcctccatccaaacacact 29889505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 268 - 336
Target Start/End: Complemental strand, 13487345 - 13487277
Alignment:
Q  268 cacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    ||||||||| || || |||||||||| |||| ||||||||||||||| ||| ||||||| |||||||||    
T  13487345 cacctcaaagtatttgaattccctcataacactacattccctcaaaacattcccccatctaaacacact 13487277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 183 - 263
Target Start/End: Original strand, 15832470 - 15832550
Alignment:
Q  183 tgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||||||| || ||||||| ||  |||||||||||||| ||||||||||| || |||| ||||||||  ||||||||    
T  15832470 tgtgtttggatgaggtaatgtttcgaaggaatgtaatgttttaagggaattcaaatactttggggtgaatttcattgtttg 15832550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 268 - 336
Target Start/End: Complemental strand, 28918235 - 28918167
Alignment:
Q  268 cacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    ||||||||| || || |||| ||| |||||||||||||||||||||| ||| | |||||||||||||||    
T  28918235 cacctcaaagtatttgaatttccttaaaacattacattccctcaaaacattcctccatccaaacacact 28918167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 263 - 336
Target Start/End: Complemental strand, 1368552 - 1368479
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||| |||||||||| | || |||||||| |||| ||||||||| ||||||| ||| | |||||||||||||||    
T  1368552 gaattcacctcaaaacatttgaattcccttaaaatattacattctctcaaaacattcctccatccaaacacact 1368479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 201 - 266
Target Start/End: Complemental strand, 6358302 - 6358237
Alignment:
Q  201 tgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaat 266  Q
    |||||||||  |||||||||||||||| ||||| || || |||| |||||||||||||||| ||||    
T  6358302 tgttttgaggtaatgtaatgttttgagagaatttaaatactttgtggtgaattctattgttagaat 6358237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 206 - 263
Target Start/End: Original strand, 34364770 - 34364827
Alignment:
Q  206 tgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||| |||||||||||| |||||||||| || || |||||||||||||| ||||||||    
T  34364770 tgagggaatgtaatgttatgagggaatttaaatactttgaggtgaattccattgtttg 34364827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 179 - 219
Target Start/End: Original strand, 33733432 - 33733472
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaat 219  Q
    |||||||||||||||| |||||||||||||| |||||||||    
T  33733432 agagtgtgtttggatgggggaatgttttgagggaatgtaat 33733472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 263 - 311
Target Start/End: Complemental strand, 34364818 - 34364770
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctca 311  Q
    |||| ||||||||| || ||||||||||||| |||||||||||||||||    
T  34364818 gaattcacctcaaagtatttaaattccctcataacattacattccctca 34364770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 208 - 239
Target Start/End: Original strand, 15299471 - 15299502
Alignment:
Q  208 agagaatgtaatgttttgagggaattcaacta 239  Q
    ||||||||||||||||||||||||||||||||    
T  15299471 agagaatgtaatgttttgagggaattcaacta 15299502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 263
Target Start/End: Complemental strand, 15616389 - 15616350
Alignment:
Q  224 tgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||||| || ||||||||||||||||||||||||||    
T  15616389 tgagggaatttaaatattttgaggtgaattctattgtttg 15616350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 298 - 336
Target Start/End: Complemental strand, 33733472 - 33733434
Alignment:
Q  298 attacattccctcaaaatatttccccatccaaacacact 336  Q
    ||||||||||||||||| ||| |||||||||||||||||    
T  33733472 attacattccctcaaaacattcccccatccaaacacact 33733434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 176 - 209
Target Start/End: Original strand, 1195348 - 1195381
Alignment:
Q  176 ctaagagtgtgtttggatgtgggaatgttttgag 209  Q
    ||||||||||||||||||| ||||||||||||||    
T  1195348 ctaagagtgtgtttggatgggggaatgttttgag 1195381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 262
Target Start/End: Original strand, 1195371 - 1195416
Alignment:
Q  217 aatgttttgagggaattcaactattttgaggtgaattctattgttt 262  Q
    |||||||||||||| ||||| || |||||||||||||| |||||||    
T  1195371 aatgttttgagggatttcaaatactttgaggtgaattccattgttt 1195416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 8475214 - 8475181
Alignment:
Q  303 attccctcaaaatatttccccatccaaacacact 336  Q
    |||||||||||| |||||||||||||||||||||    
T  8475214 attccctcaaaacatttccccatccaaacacact 8475181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 109; Significance: 1e-54; HSPs: 91)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 180 - 336
Target Start/End: Complemental strand, 20523291 - 20523135
Alignment:
Q  180 gagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaata 279  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||||||| ||    
T  20523291 gagtgtgtttggatgggggaatgttttgagagaatgtaatgttttgagggaattcaactactttaaggtgaattctattgtttgaattcacctcaaagta 20523192  T
Q  280 attaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
     || |||||||||| || ||||||||||||||||| |||  ||||||||||||||||    
T  20523191 gttgaattccctcagaatattacattccctcaaaacattctcccatccaaacacact 20523135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 177 - 336
Target Start/End: Complemental strand, 15374121 - 15373962
Alignment:
Q  177 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaa 276  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| | | |||||||||||||||||||||| |||||||||    
T  15374121 taagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactctaaggtgaattctattgtttgaattcacctcaaa 15374022  T
Q  277 ataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
     || || ||||||||||||||||||||||||||||||| |||   |||||||||||||||    
T  15374021 gtagttgaattccctcaaaacattacattccctcaaaaaattcttccatccaaacacact 15373962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 176 - 336
Target Start/End: Original strand, 9764335 - 9764495
Alignment:
Q  176 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaa 275  Q
    ||||||||||||||||||| |||||| ||||||| ||| ||||||||||||||||||||||||| ||| |||||||||||||||||||||  ||||||||    
T  9764335 ctaagagtgtgtttggatgggggaatattttgagggaaagtaatgttttgagggaattcaactactttaaggtgaattctattgtttgaactcacctcaa 9764434  T
Q  276 aataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    | || || ||||||||||||||||||||||||||| ||| ||| |||||||||||||||||    
T  9764435 agtagttgaattccctcaaaacattacattccctcgaaacattcccccatccaaacacact 9764495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 177 - 336
Target Start/End: Original strand, 2316376 - 2316535
Alignment:
Q  177 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaacta-ttttgaggtgaattctattgtttgaatccacctcaa 275  Q
    |||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||| |||  |||||||||||||||||||||| ||||||||    
T  2316376 taagagtgtgtttggatgggggaatgttttgagggaatgtaatattttgagggaattcaactactttaaaggtgaattctattgtttgaattcacctcaa 2316475  T
Q  276 aataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    | || || ||||| ||||||||||||||||||||||||| ||||  |||||||||||||||    
T  2316476 agtagttgaattctctcaaaacattacattccctcaaaacattt-tccatccaaacacact 2316535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 179 - 336
Target Start/End: Complemental strand, 40809500 - 40809343
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaat 278  Q
    ||||||||||| |||| || ||||||||||||||||||||||||||||| ||||||| ||| ||| ||||||||| |||||||||||| || |||||| |    
T  40809500 agagtgtgtttagatggggaaatgttttgagagaatgtaatgttttgagtgaattcagctactttaaggtgaattttattgtttgaattcaactcaaagt 40809401  T
Q  279 aattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    | || |||||||||||||||||| |||| ||||||| |||||||||||||||||||||    
T  40809400 agttgaattccctcaaaacattatattctctcaaaacatttccccatccaaacacact 40809343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 181 - 336
Target Start/End: Original strand, 32389974 - 32390129
Alignment:
Q  181 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataa 280  Q
    |||||||||||||| |||||||||||||  ||||||||| ||||||||||||||||||| | | |||||||||||||| ||||||| ||||||||| ||     
T  32389974 agtgtgtttggatgagggaatgttttgaaggaatgtaatattttgagggaattcaactactctaaggtgaattctattatttgaattcacctcaaagtag 32390073  T
Q  281 ttaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    || ||||||||||||||||||||||||||||||| |||  |  |||||||||||||    
T  32390074 ttgaattccctcaaaacattacattccctcaaaaaattctctaatccaaacacact 32390129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 217 - 339
Target Start/End: Original strand, 28828387 - 28828507
Alignment:
Q  217 aatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaata 316  Q
    ||||||||||||||||  || | |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  28828387 aatgttttgagggaatgtaa-tgttttgagg-gaattctattgtttgaatccacctcaaaataattgaattccctcaaaacattacattacctcaaaata 28828484  T
Q  317 tttccccatccaaacacactata 339  Q
    |||||||||||||||||||||||    
T  28828485 tttccccatccaaacacactata 28828507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 179 - 336
Target Start/End: Complemental strand, 9764497 - 9764340
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaat 278  Q
    |||||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||| |||||||||| ||| |    | |||| ||||| ||| |    
T  9764497 agagtgtgtttggatgggggaatgtttcgagggaatgtaatgttttgagggaattcaactactttgaggtgagttcaaacaatagaattcaccttaaagt 9764398  T
Q  279 aattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    | || ||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  9764397 agttgaattccctcaaaacattactttccctcaaaatattcccccatccaaacacact 9764340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 176 - 336
Target Start/End: Original strand, 32470879 - 32471037
Alignment:
Q  176 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaa 275  Q
    |||||||||| ||||||||  | ||||||||||| |||||||||||||||| |||||||||||||||| |||| ||||||||| ||||||| || |||||    
T  32470879 ctaagagtgtatttggatggagaaatgttttgagggaatgtaatgttttgaaggaattcaactattttaaggtaaattctattatttgaattcaactcaa 32470978  T
Q  276 aataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    | || || |||||||||||||||||||||||||||  || |||||| ||||||||||||||    
T  32470979 agtagttgaattccctcaaaacattacattccctc--aagatttccacatccaaacacact 32471037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 182 - 336
Target Start/End: Complemental strand, 6634170 - 6634017
Alignment:
Q  182 gtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataat 281  Q
    ||||||||||||| |||||  ||| ||| ||||||||| |||| | ||| |||||||| |||||||||||||||||||||||||| ||| || |||||||    
T  6634170 gtgtgtttggatgggggaacatttcgagggaatgtaatattttaaaggagttcaactactttgaggtgaattctattgtttgaattcac-tcgaaataat 6634072  T
Q  282 taaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    | |||||||||||||||||||||| |||||||||||  |||||||||||||||||    
T  6634071 tgaattccctcaaaacattacattacctcaaaatatccccccatccaaacacact 6634017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 176 - 300
Target Start/End: Complemental strand, 40643979 - 40643856
Alignment:
Q  176 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaa 275  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||  | |||||    
T  40643979 ctaagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaacta-tttaaggtgaattctattgtttgaatttaactcaa 40643881  T
Q  276 aataattaaattccctcaaaacatt 300  Q
    | || || |||||||||||||||||    
T  40643880 agtagttgaattccctcaaaacatt 40643856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 179 - 336
Target Start/End: Original strand, 15373960 - 15374117
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaat 278  Q
    ||||||||||||||||   |||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||| |    | |||| ||||| | | |    
T  15373960 agagtgtgtttggatggaagaattttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaccttagagt 15374059  T
Q  279 aattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    | || ||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  15374060 agttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacact 15374117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 179 - 336
Target Start/End: Original strand, 20523133 - 20523290
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaat 278  Q
    |||||||||||||||| | |||||||||||| ||||||||| || |||||||||||||||| |||||||||||||| |    | |||| ||||| ||| |    
T  20523133 agagtgtgtttggatgggagaatgttttgagggaatgtaatattctgagggaattcaactactttgaggtgaattcaaacaatagaattcaccttaaagt 20523232  T
Q  279 aattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    | || ||||||||||||||||||||||| ||||||| ||| |||||||||||||||||    
T  20523233 agttgaattccctcaaaacattacattctctcaaaacattcccccatccaaacacact 20523290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 174 - 336
Target Start/End: Complemental strand, 32390136 - 32389974
Alignment:
Q  174 ctctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctc 273  Q
    ||||||||||||||||||||  | |||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||| | |  | |||| |||||     
T  32390136 ctctaagagtgtgtttggattagagaattttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattcaaataatagaattcacctt 32390037  T
Q  274 aaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    | | || || ||||||||||||| |||||||||| |||||| ||| || ||||||||||||||    
T  32390036 agagtagttgaattccctcaaaatattacattccttcaaaacattccctcatccaaacacact 32389974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 176 - 336
Target Start/End: Original strand, 40809338 - 40809498
Alignment:
Q  176 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaa 275  Q
    ||||||||||||||||||| || |||||||||||||||| |||||||||||||||||||||||| |||||| ||||||| |    |  ||| ||||| ||    
T  40809338 ctaagagtgtgtttggatggggaaatgttttgagagaatataatgttttgagggaattcaactactttgagttgaattcaaacaataaaattcaccttaa 40809437  T
Q  276 aataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    | ||  | ||||| ||||||||||||||||| ||||||| ||||||||||| |||||||||    
T  40809438 agtagctgaattcactcaaaacattacattctctcaaaacatttccccatctaaacacact 40809498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 179 - 336
Target Start/End: Complemental strand, 32471039 - 32470884
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaat 278  Q
    ||||||||||||||||||| ||| ||  ||| ||||||||||||||||||||||||||||| |||||| ||||||| | |  | ||||  |||| |||||    
T  32471039 agagtgtgtttggatgtggaaatctt--gagggaatgtaatgttttgagggaattcaactactttgagttgaattcaaataatagaatttaccttaaaat 32470942  T
Q  279 aattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    | || |||||| |||||||||||||||||||||||| ||||| ||||||||| |||||    
T  32470941 agttgaattccttcaaaacattacattccctcaaaacatttctccatccaaatacact 32470884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 179 - 336
Target Start/End: Original strand, 23091963 - 23092119
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaat 278  Q
    ||||||||||| |||| |||||| ||||||| |||||||||||||||| |||||||||||| ||| || ||||||||||| | ||||| || || ||| |    
T  23091963 agagtgtgttttgatg-gggaatattttgagggaatgtaatgttttgaaggaattcaactactttaagttgaattctattttctgaattcatctgaaagt 23092061  T
Q  279 aattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    | || || ||||||||||||||||||||  |||||| ||| |||||||||||||||||    
T  23092062 agttgaactccctcaaaacattacattcgttcaaaacattcccccatccaaacacact 23092119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 179 - 336
Target Start/End: Complemental strand, 2316537 - 2316380
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacc-tcaaaa 277  Q
    |||||||||||||||| |  ||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||| |    | |||| |||| | |||     
T  2316537 agagtgtgtttggatg-gaaaatgttttgagggaatgtaatgttttgagagaattcaactactttgaggtgaattcaaacaatagaattcacctttaaag 2316439  T
Q  278 taattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    || || ||||||||||||| ||||||||||||||||| ||| |||||||||||||||||    
T  2316438 tagttgaattccctcaaaatattacattccctcaaaacattcccccatccaaacacact 2316380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 177 - 336
Target Start/End: Complemental strand, 23092123 - 23091965
Alignment:
Q  177 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaa 276  Q
    |||||||||||||||||| |||||||||||||  |||||||||||||||||||| |||||||| ||| || |||||||      | |||| || || |||    
T  23092123 taagagtgtgtttggatgggggaatgttttgaacgaatgtaatgttttgagggagttcaactactttcagatgaattcagaaaatagaattcaacttaaa 23092024  T
Q  277 ataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
     || || |||||| |||||||||||||||||||||||||| ||||||||| |||||||||    
T  23092023 gtagttgaattccttcaaaacattacattccctcaaaata-ttccccatcaaaacacact 23091965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 180 - 266
Target Start/End: Original strand, 3563278 - 3563364
Alignment:
Q  180 gagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaat 266  Q
    ||||||||||||||  |||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||    
T  3563278 gagtgtgtttggataggggaatgttttgagggaatgtaatgttttgagggaattcaactactttaaggtgaattctattgcttgaat 3563364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 174 - 339
Target Start/End: Complemental strand, 16515182 - 16515004
Alignment:
Q  174 ctctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaatt--------------ctattg 259  Q
    ||||||||||||||||||||| | ||||||||| || ||||||||||||||||||||||||||||  |||||||||||||              ||||||    
T  16515182 ctctaagagtgtgtttggatgagagaatgtttttagggaatgtaatgttttgagggaattcaacttctttgaggtgaattctataaggtgaattctattg 16515083  T
Q  260 tttgaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacactata 339  Q
    || |||| |||||||||  | || |||||||||||||| |||||||||||||||| | ||| ||||||||||||| ||||    
T  16515082 ttagaattcacctcaaagaagttgaattccctcaaaaccttacattccctcaaaaca-ttctccatccaaacacattata 16515004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 179 - 263
Target Start/End: Original strand, 22766952 - 22767036
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||||||||||| |||||||||||||| |||| ||||||||||||||||||||| || ||| |||||||||||||||||||    
T  22766952 agagtgtgtttggatgggggaatgttttgagggaatataatgttttgagggaattcaaatactttaaggtgaattctattgtttg 22767036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 175 - 263
Target Start/End: Complemental strand, 25935364 - 25935276
Alignment:
Q  175 tctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||| ||||| ||||||| || |||||||||||||| ||||||||    
T  25935364 tctaagagtgtgtttggatgggggaatgttttgagggaatgtaatgttatgaggaaattcaaatactttgaggtgaattccattgtttg 25935276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 179 - 263
Target Start/End: Complemental strand, 37722964 - 37722880
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||| || |||||||||||||| ||||||||    
T  37722964 agagtgtgtttggatgggggaatattttgagggaatgtaatgttttgagggaattcaaatactttgaggtgaattccattgtttg 37722880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 175 - 263
Target Start/End: Complemental strand, 40090488 - 40090400
Alignment:
Q  175 tctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||||||||||||||| ||||||||||||||  ||||||||||||||| ||||||||| || |||||||||||||| ||||||||    
T  40090488 tctaagagtgtgtttggatgggggaatgttttgaggaaatgtaatgttttgatggaattcaaatactttgaggtgaattccattgtttg 40090400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 181 - 252
Target Start/End: Complemental strand, 2721628 - 2721557
Alignment:
Q  181 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaat 252  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  2721628 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaat 2721557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 174 - 335
Target Start/End: Original strand, 6634010 - 6634170
Alignment:
Q  174 ctctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctc 273  Q
    ||||||||||||||||||||| ||| || |||||||  ||||||||||||||||||||||||| ||||| || |||||||| |    | |||| ||||||    
T  6634010 ctctaagagtgtgtttggatggggggatattttgaggtaatgtaatgttttgagggaattcaattatttcga-gtgaattcaaacaatagaattcacctc 6634108  T
Q  274 aaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacac 335  Q
    ||| || || || ||| | |||| ||||||||||||| |||| || ||||||||||||||||    
T  6634109 aaagtagttgaactcctttaaaatattacattccctcgaaatgttcccccatccaaacacac 6634170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 179 - 256
Target Start/End: Complemental strand, 26281339 - 26281262
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattcta 256  Q
    |||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||    
T  26281339 agagtgtgtttggatgggggaacgttttgagggaatgtaatgttttgagggaattcaactactttaaggtgaattcta 26281262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 175 - 263
Target Start/End: Original strand, 927298 - 927386
Alignment:
Q  175 tctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||||||||||||||| || ||||||||||| ||||||| |||||||||||||||||| || |||| ||||||||| ||||||||    
T  927298 tctaagagtgtgtttggatggggaaatgttttgagggaatgtattgttttgagggaattcaaatactttggggtgaattccattgtttg 927386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 179 - 254
Target Start/End: Original strand, 15804322 - 15804397
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattc 254  Q
    |||||||||||||||| |||||||||||||| ||||||| ||||||||||||||||||||| |||||| |||||||    
T  15804322 agagtgtgtttggatgggggaatgttttgagggaatgtagtgttttgagggaattcaactactttgagttgaattc 15804397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 176 - 263
Target Start/End: Complemental strand, 41762288 - 41762201
Alignment:
Q  176 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    ||||||||||||||||||| |||||||||||||| ||||||| |||||| ||||||||||| || |||| ||||||||| ||||||||    
T  41762288 ctaagagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattcaaatactttggggtgaattccattgtttg 41762201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 263 - 336
Target Start/End: Original strand, 37722889 - 37722962
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||| ||||||||| || || ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  37722889 gaattcacctcaaagtatttgaattccctcaaaacattacattccctcaaaatattcccccatccaaacacact 37722962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 179 - 263
Target Start/End: Complemental strand, 22303940 - 22303856
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||| ||  ||||||||||||  ||||||||    
T  22303940 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaaggaattcaaataccttgaggtgaatttcattgtttg 22303856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 283 - 338
Target Start/End: Original strand, 15804398 - 15804453
Alignment:
Q  283 aaattccctcaaaacattacattccctcaaaatatttccccatccaaacacactat 338  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  15804398 aaattccctcaaaacattacattccctcaaaacatttccccatccaaacacactat 15804453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 217 - 336
Target Start/End: Original strand, 40643856 - 40643974
Alignment:
Q  217 aatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaata 316  Q
    ||||||||||||||||||||||| |||||| | ||||| |    | |||| ||||| ||| || || ||||||||||||||||||||||||||||||| |    
T  40643856 aatgttttgagggaattcaactactttgagttaaattcaaacaatagaattcaccttaaa-tagttgaattccctcaaaacattacattccctcaaaaca 40643954  T
Q  317 tttccccatccaaacacact 336  Q
    || |||||||||||||||||    
T  40643955 ttcccccatccaaacacact 40643974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 268 - 338
Target Start/End: Original strand, 2721560 - 2721630
Alignment:
Q  268 cacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacactat 338  Q
    ||||||||| || || ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  2721560 cacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactat 2721630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 181 - 263
Target Start/End: Complemental strand, 19533975 - 19533893
Alignment:
Q  181 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    ||||||||||||||  ||||||||||||| |||||||||||| ||||||||||||| || |||||||||||||  ||||||||    
T  19533975 agtgtgtttggatggaggaatgttttgagggaatgtaatgttatgagggaattcaaatactttgaggtgaatttcattgtttg 19533893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 177 - 263
Target Start/End: Complemental strand, 32250169 - 32250084
Alignment:
Q  177 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||| ||  ||||| ||||||| ||||||||    
T  32250169 taagagtgtgtttggatg-gggaatgttttgagggaaagtaatgttttgagggaattcaaataccttgagatgaattccattgtttg 32250084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 183 - 263
Target Start/End: Complemental strand, 9894388 - 9894308
Alignment:
Q  183 tgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||||||| |||||||||||||| ||||||||||||   ||||||||||| || |||||||||||||| ||||||||    
T  9894388 tgtgtttggatgggggaatgttttgagggaatgtaatgttaccagggaattcaaatactttgaggtgaattccattgtttg 9894308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 179 - 259
Target Start/End: Original strand, 35379344 - 35379423
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattg 259  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |  ||||| ||||||| |||||    
T  35379344 agagtgtgtttggatg-gggaatgttttgagataatgtaatgttttgagggaattcaaattctttgaagtgaattttattg 35379423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 181 - 263
Target Start/End: Complemental strand, 37145569 - 37145487
Alignment:
Q  181 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||| ||||||||| |||||||||||||| |||||||||||| |||| |||||||| || |||||||||||||  ||||||||    
T  37145569 agtgggtttggatgggggaatgttttgagggaatgtaatgttatgagagaattcaaatactttgaggtgaatttcattgtttg 37145487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 263 - 336
Target Start/End: Complemental strand, 927377 - 927304
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||| |||| |||| || || ||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  927377 gaattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaacatttccccatccaaacacact 927304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 183 - 256
Target Start/End: Original strand, 16515009 - 16515081
Alignment:
Q  183 tgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattcta 256  Q
    |||||||||||| | |||||||||||| |||||||| |||||||||||||||||||  ||||||||||||||||    
T  16515009 tgtgtttggatg-gagaatgttttgagggaatgtaaggttttgagggaattcaacttctttgaggtgaattcta 16515081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 181 - 234
Target Start/End: Original strand, 28828369 - 28828422
Alignment:
Q  181 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattc 234  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  28828369 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 28828422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 181 - 254
Target Start/End: Complemental strand, 28828504 - 28828431
Alignment:
Q  181 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattc 254  Q
    |||||||||||||| || ||| |||||||  ||||||||||||||||||||||||| |||||||||||| ||||    
T  28828504 agtgtgtttggatggggaaatattttgaggtaatgtaatgttttgagggaattcaattattttgaggtggattc 28828431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 260 - 336
Target Start/End: Complemental strand, 15804400 - 15804324
Alignment:
Q  260 tttgaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    ||||||| || |||||| || || ||||||||||||||| ||||||||||||||| ||| |||||||||||||||||    
T  15804400 tttgaattcaactcaaagtagttgaattccctcaaaacactacattccctcaaaacattcccccatccaaacacact 15804324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 28828421 - 28828369
Alignment:
Q  284 aattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  28828421 aattccctcaaaacattacattccctcaaaacattcccccatccaaacacact 28828369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 176 - 252
Target Start/End: Original strand, 34982213 - 34982288
Alignment:
Q  176 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaat 252  Q
    ||||||||||||||||||  |||||||||||||| |||||| |||||||||||||||||||| | ||| ||||||||    
T  34982213 ctaagagtgtgtttggataggggaatgttttgagggaatgt-atgttttgagggaattcaaccactttaaggtgaat 34982288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 176 - 263
Target Start/End: Original strand, 10314646 - 10314733
Alignment:
Q  176 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||| ||||||||||  | ||||||||||   |||||||| |||| ||||||||||| |||||||| |||||||||||||||||    
T  10314646 ctaagagtatgtttggatggagaaatgttttgaagaaatgtaatattttaagggaattcaaatattttgatgtgaattctattgtttg 10314733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 268 - 339
Target Start/End: Original strand, 19533907 - 19533978
Alignment:
Q  268 cacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacactata 339  Q
    ||||||||| || || |||||||||| |||||||||||||||||||| ||| | ||||||||||||||||||    
T  19533907 cacctcaaagtatttgaattccctcataacattacattccctcaaaacattcctccatccaaacacactata 19533978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 180 - 255
Target Start/End: Complemental strand, 33245441 - 33245366
Alignment:
Q  180 gagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattct 255  Q
    ||||||||||||||| |||||||||||||  |||||||||||||||||  |||||||||| ||| || ||||||||    
T  33245441 gagtgtgtttggatgggggaatgttttgatggaatgtaatgttttgagaaaattcaactactttaagttgaattct 33245366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 289 - 339
Target Start/End: Original strand, 13243514 - 13243564
Alignment:
Q  289 cctcaaaacattacattccctcaaaatatttccccatccaaacacactata 339  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  13243514 cctcaaaacattacattacctcaaaatattcccccatccaaacacactata 13243564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 263 - 336
Target Start/End: Complemental strand, 3563352 - 3563279
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||| ||||| ||| || || ||||||||||||||||||||||||||||||| ||| ||| |||||||||||||    
T  3563352 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacattcccctatccaaacacact 3563279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 176 - 234
Target Start/End: Original strand, 13243454 - 13243514
Alignment:
Q  176 ctaagagtgtgtttg--gatgtgggaatgttttgagagaatgtaatgttttgagggaattc 234  Q
    |||||||||||||||  |||| |||||||||||||| ||||||||||||||||||||||||    
T  13243454 ctaagagtgtgtttgtggatgagggaatgttttgagggaatgtaatgttttgagggaattc 13243514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 172 - 233
Target Start/End: Complemental strand, 15804460 - 15804399
Alignment:
Q  172 ttctctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaatt 233  Q
    |||||| | |||||||||||||| || ||||||||||| |||||||||||||||||||||||    
T  15804460 ttctctcatagtgtgtttggatggggaaatgttttgagggaatgtaatgttttgagggaatt 15804399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 263 - 336
Target Start/End: Complemental strand, 22767027 - 22766954
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||| ||||| ||| || || |||||||||||||||||| |||||||||||| ||| |||||||||||||||||    
T  22767027 gaattcaccttaaagtatttgaattccctcaaaacattatattccctcaaaacattcccccatccaaacacact 22766954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 263 - 336
Target Start/End: Original strand, 25935285 - 25935358
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||| ||||||||| || || |||| ||||| |||||||||||||||||||| ||| |||||||||||||||||    
T  25935285 gaattcacctcaaagtatttgaatttcctcataacattacattccctcaaaacattcccccatccaaacacact 25935358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 263 - 336
Target Start/End: Original strand, 26281264 - 26281337
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||| ||||| ||| || || |||||||||||||||||||||||||||||||  || |||||||||||||||||    
T  26281264 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacgttcccccatccaaacacact 26281337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 263 - 336
Target Start/End: Original strand, 40090409 - 40090482
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||| ||||||||| || || |||||| ||||||||||||||| |||||||| ||| |||||||||||||||||    
T  40090409 gaattcacctcaaagtatttgaattccatcaaaacattacatttcctcaaaacattcccccatccaaacacact 40090482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 284 - 336
Target Start/End: Original strand, 22303886 - 22303938
Alignment:
Q  284 aattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||||| |||||||||||||||||||||||| ||| |||||||||||||||||    
T  22303886 aattccttcaaaacattacattccctcaaaacattcccccatccaaacacact 22303938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 181 - 263
Target Start/End: Original strand, 14834826 - 14834908
Alignment:
Q  181 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||||| ||| | |||||||| ||| |||||||||||||| ||||||| ||| || |||||||||||||  ||||||||    
T  14834826 agtgtgtttgcatgggagaatgtttcgagggaatgtaatgttttaagggaatccaaatactttgaggtgaatttcattgtttg 14834908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 217 - 263
Target Start/End: Original strand, 22305132 - 22305178
Alignment:
Q  217 aatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||    
T  22305132 aatgttttgagggaattcaactactttgaggtgaattccattgtttg 22305178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 217 - 266
Target Start/End: Complemental strand, 15270886 - 15270837
Alignment:
Q  217 aatgttttgagggaattcaactattttgaggtgaattctattgtttgaat 266  Q
    |||||||||||||||||||| || |||||||||||||| |||||||||||    
T  15270886 aatgttttgagggaattcaaatactttgaggtgaattccattgtttgaat 15270837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 217 - 266
Target Start/End: Complemental strand, 17542393 - 17542344
Alignment:
Q  217 aatgttttgagggaattcaactattttgaggtgaattctattgtttgaat 266  Q
    |||||||||||||||||||| || |||||||||||||| |||||||||||    
T  17542393 aatgttttgagggaattcaaatactttgaggtgaattccattgtttgaat 17542344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 263 - 336
Target Start/End: Original strand, 41762210 - 41762283
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||| |||| |||| || || |||||||| |||||| ||||||||||||||| ||| |||||||||||||||||    
T  41762210 gaattcaccccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacact 41762283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 284 - 336
Target Start/End: Original strand, 32250114 - 32250165
Alignment:
Q  284 aattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    ||||||||||||||||||| ||||||||||| | |||||||||||||||||||    
T  32250114 aattccctcaaaacattactttccctcaaaaca-ttccccatccaaacacact 32250165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 211 - 263
Target Start/End: Original strand, 35111258 - 35111310
Alignment:
Q  211 gaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||||||||||| ||||||||| |||||||| |||| ||||||||||||    
T  35111258 gaatgtaatgttttgaaggaattcaaatattttgatgtgagttctattgtttg 35111310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 268 - 336
Target Start/End: Original strand, 37145501 - 37145569
Alignment:
Q  268 cacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    ||||||||| || || ||||| |||| |||||||||||||||||||| ||| |||||||||||| ||||    
T  37145501 cacctcaaagtatttgaattctctcataacattacattccctcaaaacattcccccatccaaacccact 37145569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 293 - 336
Target Start/End: Complemental strand, 5658821 - 5658778
Alignment:
Q  293 aaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||||||||||||||||||||| ||||| |||||||||||||||    
T  5658821 aaaacattacattccctcaaaacatttctccatccaaacacact 5658778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 263 - 334
Target Start/End: Original strand, 9894317 - 9894388
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacaca 334  Q
    |||| ||||||||| || || ||||||||   |||||||||||||||||||| ||| |||||||||||||||    
T  9894317 gaattcacctcaaagtatttgaattccctggtaacattacattccctcaaaacattcccccatccaaacaca 9894388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 181 - 263
Target Start/End: Complemental strand, 20320716 - 20320634
Alignment:
Q  181 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    ||||||||||||||   |||||||||||  ||||||||| |||| ||||||||||| || ||||  |||||||| ||||||||    
T  20320716 agtgtgtttggatgaatgaatgttttgaaggaatgtaatattttaagggaattcaaatactttggtgtgaattccattgtttg 20320634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 172 - 214
Target Start/End: Original strand, 22305105 - 22305147
Alignment:
Q  172 ttctctaagagtgtgtttggatgtgggaatgttttgagagaat 214  Q
    ||||||||||||||||||||||| |||||||||||||| ||||    
T  22305105 ttctctaagagtgtgtttggatgggggaatgttttgagggaat 22305147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 263
Target Start/End: Original strand, 33146211 - 33146257
Alignment:
Q  217 aatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||||||||||||||| || |||||||||||||| ||||||||    
T  33146211 aatgttttgagggaattcaaatactttgaggtgaattccattgtttg 33146257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 290 - 336
Target Start/End: Original strand, 33245394 - 33245440
Alignment:
Q  290 ctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||||||||||||||||| |||||| ||| |||||||||||||||||    
T  33245394 ctcaaaacattacattccatcaaaacattcccccatccaaacacact 33245440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 263 - 336
Target Start/End: Original strand, 16515102 - 16515175
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||| |||||||||  | || |||||||||||||||||||||||||| |||| |||  | ||||||||||||||    
T  16515102 gaattcacctcaaagaagttgaattccctcaaaacattacattccctaaaaacattctctcatccaaacacact 16515175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 218 - 263
Target Start/End: Complemental strand, 17492679 - 17492634
Alignment:
Q  218 atgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    ||||||||||||||||||| || |||||||||||||| ||||||||    
T  17492679 atgttttgagggaattcaaataatttgaggtgaattccattgtttg 17492634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 218 - 263
Target Start/End: Original strand, 28490031 - 28490076
Alignment:
Q  218 atgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    ||||||||||||||||||| || |||||||||||||| ||||||||    
T  28490031 atgttttgagggaattcaaatactttgaggtgaattccattgtttg 28490076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 217 - 253
Target Start/End: Original strand, 2550348 - 2550384
Alignment:
Q  217 aatgttttgagggaattcaactattttgaggtgaatt 253  Q
    ||||||||||||||||||||||| |||||||||||||    
T  2550348 aatgttttgagggaattcaactactttgaggtgaatt 2550384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 176 - 224
Target Start/End: Original strand, 5658773 - 5658821
Alignment:
Q  176 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgtttt 224  Q
    |||||||||||||||||||  | ||||||||||| ||||||||||||||    
T  5658773 ctaagagtgtgtttggatggagaaatgttttgagggaatgtaatgtttt 5658821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 284 - 328
Target Start/End: Complemental strand, 13243513 - 13243469
Alignment:
Q  284 aattccctcaaaacattacattccctcaaaatatttccccatcca 328  Q
    ||||||||||||||||||||||||||||||| ||| || ||||||    
T  13243513 aattccctcaaaacattacattccctcaaaacattccctcatcca 13243469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 34982269 - 34982218
Alignment:
Q  284 aattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||||||||||||||| |||||||||||||| ||| ||| |||||||||||||    
T  34982269 aattccctcaaaacat-acattccctcaaaacattcccctatccaaacacact 34982218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 35379397 - 35379346
Alignment:
Q  284 aattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    ||||||||||||||||||||||  ||||||| | |||||||||||||||||||    
T  35379397 aattccctcaaaacattacattatctcaaaaca-ttccccatccaaacacact 35379346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 212 - 263
Target Start/End: Original strand, 8255060 - 8255110
Alignment:
Q  212 aatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    ||||||||||||||||||||||||| |||||| |||||||||  ||||||||    
T  8255060 aatgtaatgttttgagggaattcaaatatttt-aggtgaatttcattgtttg 8255110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #84
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 228
Target Start/End: Complemental strand, 13243561 - 13243514
Alignment:
Q  181 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagg 228  Q
    |||||||||||||| |||||| |||||||  |||||||||||||||||    
T  13243561 agtgtgtttggatgggggaatattttgaggtaatgtaatgttttgagg 13243514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #85
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 180 - 263
Target Start/End: Original strand, 37090282 - 37090365
Alignment:
Q  180 gagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    ||||||||||||||    ||||||||||||  ||||  ||||||||||| ||||||| |||||| | |||||||| ||||||||    
T  37090282 gagtgtgtttggatagaagaatgttttgaggtaatgcgatgttttgaggaaattcaaatatttttatgtgaattccattgtttg 37090365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #86
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 214
Target Start/End: Original strand, 2550325 - 2550363
Alignment:
Q  176 ctaagagtgtgtttggatgtgggaatgttttgagagaat 214  Q
    ||||||||||||||||||| |||||||||||||| ||||    
T  2550325 ctaagagtgtgtttggatgggggaatgttttgagggaat 2550363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #87
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 211 - 253
Target Start/End: Original strand, 30519036 - 30519078
Alignment:
Q  211 gaatgtaatgttttgagggaattcaactattttgaggtgaatt 253  Q
    |||||||||||| ||||||||||||| ||||||| ||||||||    
T  30519036 gaatgtaatgttatgagggaattcaaatattttgcggtgaatt 30519078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #88
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 211 - 253
Target Start/End: Original strand, 30559376 - 30559418
Alignment:
Q  211 gaatgtaatgttttgagggaattcaactattttgaggtgaatt 253  Q
    |||||||||||| ||||||||||||| ||||||| ||||||||    
T  30559376 gaatgtaatgttatgagggaattcaaatattttgcggtgaatt 30559418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #89
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 211 - 253
Target Start/End: Complemental strand, 37241640 - 37241598
Alignment:
Q  211 gaatgtaatgttttgagggaattcaactattttgaggtgaatt 253  Q
    |||||||||||||||||||||||||| || |||||| ||||||    
T  37241640 gaatgtaatgttttgagggaattcaaatactttgagctgaatt 37241598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #90
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 332
Target Start/End: Complemental strand, 10314724 - 10314655
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaaca 332  Q
    |||| ||| |||||||| || |||||||| |||| |||||||| | |||||| ||||| |||||||||||    
T  10314724 gaattcacatcaaaatatttgaattcccttaaaatattacatttcttcaaaacatttctccatccaaaca 10314655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #91
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 268 - 336
Target Start/End: Complemental strand, 14834894 - 14834826
Alignment:
Q  268 cacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    ||||||||| || ||  ||||||| |||||||||||||||||| ||| |||  ||||| ||||||||||    
T  14834894 cacctcaaagtatttggattcccttaaaacattacattccctcgaaacattctcccatgcaaacacact 14834826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 108; Significance: 4e-54; HSPs: 86)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 187 - 318
Target Start/End: Original strand, 31070415 - 31070545
Alignment:
Q  187 tttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaat 286  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||    
T  31070415 tttggatg-gggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattctattgtttgaatccacctcaaaataattgaat 31070513  T
Q  287 tccctcaaaacattacattccctcaaaatatt 318  Q
    ||||||||||||||||||| ||||||||||||    
T  31070514 tccctcaaaacattacattacctcaaaatatt 31070545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 179 - 336
Target Start/End: Original strand, 44692822 - 44692979
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaat 278  Q
    |||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||| | ||| |||||||||||||||||||||| ||||||||| |    
T  44692822 agagtgtgtttggatgggggaatgttttgagggaaagtaatgttttgagggaattcaaccactttaaggtgaattctattgtttgaattcacctcaaagt 44692921  T
Q  279 aattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    | || ||||||||||||||||||||||||||||||| ||| | |||||||||||||||    
T  44692922 agttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacact 44692979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 176 - 305
Target Start/End: Original strand, 44436255 - 44436384
Alignment:
Q  176 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaa 275  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||||    
T  44436255 ctaagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaggaaattcaactattttaaggtgaattctattgtttgaattcacctcaa 44436354  T
Q  276 aataattaaattccctcaaaacattacatt 305  Q
    | || || ||||||||||||||||||||||    
T  44436355 agtagttgaattccctcaaaacattacatt 44436384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 177 - 336
Target Start/End: Original strand, 9129342 - 9129501
Alignment:
Q  177 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaa 276  Q
    |||||||||||||||||| | || | ||||||| |||||||||||||||| |||||||||||| ||| || ||||||||||||||||||| |||||||||    
T  9129342 taagagtgtgtttggatgggagactattttgagggaatgtaatgttttgatggaattcaactactttaagttgaattctattgtttgaattcacctcaaa 9129441  T
Q  277 ataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
     || || ||||||||||||||||||||||||||||||| ||| || ||||||||||||||    
T  9129442 gtagttgaattccctcaaaacattacattccctcaaaacattccctcatccaaacacact 9129501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 177 - 336
Target Start/End: Original strand, 9137449 - 9137608
Alignment:
Q  177 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaa 276  Q
    |||||||||||||||||| | || | ||||||| |||||||||||||||| |||||||||||| ||| || ||||||||||||||||||| |||||||||    
T  9137449 taagagtgtgtttggatgggagactattttgagggaatgtaatgttttgatggaattcaactactttaagttgaattctattgtttgaattcacctcaaa 9137548  T
Q  277 ataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
     || || ||||||||||||||||||||||||||||||| ||| || ||||||||||||||    
T  9137549 gtagttgaattccctcaaaacattacattccctcaaaacattccctcatccaaacacact 9137608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 179 - 336
Target Start/End: Complemental strand, 5415942 - 5415785
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaat 278  Q
    |||||||||||||||| |||||| ||||||| ||| |||||||||||| |||||||||||| ||| ||||||||||||||||||| |  ||||| ||| |    
T  5415942 agagtgtgtttggatgggggaatattttgagggaaagtaatgttttgatggaattcaactactttaaggtgaattctattgtttgtactcaccttaaagt 5415843  T
Q  279 aattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    | || ||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  5415842 agttgaattccctcaaaacattacattccctcaaaatattcccctatccaaacacact 5415785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 217 - 336
Target Start/End: Original strand, 46429434 - 46429553
Alignment:
Q  217 aatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaata 316  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||    
T  46429434 aatgttttgagggaattcaactactttaaggtgaattctattgtttgaatccacctcaaaataattgaattccttcaaaacattacattacctcaaaata 46429533  T
Q  317 tttccccatccaaacacact 336  Q
    || || ||||||||||||||    
T  46429534 ttccctcatccaaacacact 46429553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 176 - 336
Target Start/End: Complemental strand, 44692984 - 44692824
Alignment:
Q  176 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaa 275  Q
    |||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |    | |||| ||||| ||    
T  44692984 ctaagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaccttaa 44692885  T
Q  276 aataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    | |  || ||||||||||||||||||| ||||||||||| ||| |||||||||||||||||    
T  44692884 agtggttgaattccctcaaaacattactttccctcaaaacattcccccatccaaacacact 44692824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 177 - 336
Target Start/End: Complemental strand, 9129505 - 9129346
Alignment:
Q  177 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaa 276  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |    | |||| || || |||    
T  9129505 taagagtgtgtttggatgagggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaacttaaa 9129406  T
Q  277 ataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
     || || |||||| |||||||||||||||||||||||||| |  ||||||||||||||||    
T  9129405 gtagttgaattccatcaaaacattacattccctcaaaatagtctcccatccaaacacact 9129346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 177 - 336
Target Start/End: Complemental strand, 9137612 - 9137453
Alignment:
Q  177 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaa 276  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |    | |||| || || |||    
T  9137612 taagagtgtgtttggatgagggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaacttaaa 9137513  T
Q  277 ataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
     || || |||||| |||||||||||||||||||||||||| |  ||||||||||||||||    
T  9137512 gtagttgaattccatcaaaacattacattccctcaaaatagtctcccatccaaacacact 9137453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 217 - 332
Target Start/End: Complemental strand, 28092335 - 28092220
Alignment:
Q  217 aatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaata 316  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||| ||||| |||||||| |    
T  28092335 aatgttttgagggaattcaactgttttgaggtgaattctattgtttgaattcacctcaaagtaattgaattccctcaaaacatcacatttcctcaaaaca 28092236  T
Q  317 tttccccatccaaaca 332  Q
    || |||||||||||||    
T  28092235 ttcccccatccaaaca 28092220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 221 - 336
Target Start/End: Original strand, 47284268 - 47284383
Alignment:
Q  221 ttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttc 320  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||||||||      
T  47284268 ttttgagggaattcagctactttgaggtgaattctattgtttgaatcaacctcaaaataattgaattccctcaaaacattacattacctcaaaatattct 47284367  T
Q  321 cccatccaaacacact 336  Q
    | ||||||||||||||    
T  47284368 ctcatccaaacacact 47284383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 217 - 336
Target Start/End: Original strand, 27251932 - 27252051
Alignment:
Q  217 aatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaata 316  Q
    |||||||| |||||||||||||| ||| || ||||||||||||||||||| ||||||||| || || ||||||||||||||||||||||||||||||| |    
T  27251932 aatgttttaagggaattcaactactttaagttgaattctattgtttgaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaaca 27252031  T
Q  317 tttccccatccaaacacact 336  Q
    |  |||||||||||||||||    
T  27252032 tccccccatccaaacacact 27252051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 211 - 338
Target Start/End: Complemental strand, 42130819 - 42130692
Alignment:
Q  211 gaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacattacattccctc 310  Q
    ||||||||| |||| ||||||||||| || |||||||||||||||| | ||||||||||| | || |||||| |||||||||||||||||||||  ||||    
T  42130819 gaatgtaatctttttagggaattcaattactttgaggtgaattctactctttgaatccacttaaagataattgaattccctcaaaacattacatcacctc 42130720  T
Q  311 aaaatatttccccatccaaacacactat 338  Q
    |||||||| ||||| |||||||||||||    
T  42130719 aaaatattcccccacccaaacacactat 42130692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 178 - 336
Target Start/End: Original strand, 5415782 - 5415940
Alignment:
Q  178 aagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaa 277  Q
    ||||||||||||||||  |||||| ||||||| ||||||||||||||||||||||||||||| ||| |||||| | | |    | |||| ||||| |||     
T  5415782 aagagtgtgtttggataggggaatattttgagggaatgtaatgttttgagggaattcaactactttaaggtgagtacaaacaatagaattcaccttaaag 5415881  T
Q  278 taattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    || || |||||| |||||||||||| ||||||||||||||| |||||||||||||||||    
T  5415882 tagttgaattccatcaaaacattactttccctcaaaatattcccccatccaaacacact 5415940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 221 - 339
Target Start/End: Original strand, 39215880 - 39215998
Alignment:
Q  221 ttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttc 320  Q
    |||| ||||||||||| || ||||||||||||| |||||||||||||||||||||||||||| ||||  |||||||||||| ||| ||||||||||||      
T  39215880 tttttagggaattcaattactttgaggtgaattttattgtttgaatccacctcaaaataattgaattttctcaaaacattatattacctcaaaatattct 39215979  T
Q  321 cccatccaaacacactata 339  Q
    | |||||||||||||||||    
T  39215980 ctcatccaaacacactata 39215998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 212 - 336
Target Start/End: Complemental strand, 44436384 - 44436260
Alignment:
Q  212 aatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacattacattccctca 311  Q
    |||||||||||||||||||||||||||| |||||||||||||| |    | |||| ||||| |||||| || |||| |||||||||||||||||||||||    
T  44436384 aatgtaatgttttgagggaattcaactactttgaggtgaattcaaacaatagaattcaccttaaaatagttgaatttcctcaaaacattacattccctca 44436285  T
Q  312 aaatatttccccatccaaacacact 336  Q
    ||| ||| |||||||||||||||||    
T  44436284 aaacattcccccatccaaacacact 44436260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 179 - 255
Target Start/End: Complemental strand, 46672875 - 46672799
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattct 255  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  46672875 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattct 46672799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 176 - 259
Target Start/End: Original strand, 49457340 - 49457423
Alignment:
Q  176 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattg 259  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| | ||| |||||||||||||||    
T  49457340 ctaagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaaccactttaaggtgaattctattg 49457423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 176 - 254
Target Start/End: Complemental strand, 27252056 - 27251978
Alignment:
Q  176 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattc 254  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  27252056 ctaagagtgtgtttggatggggggatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattc 27251978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 198 - 330
Target Start/End: Complemental strand, 31070546 - 31070415
Alignment:
Q  198 gaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaac 297  Q
    |||| |||||||  ||||||||||||||||||||||||| |||||||||||| |||| |    | |||| ||||||||| || || ||||||||||||||    
T  31070546 gaatattttgaggtaatgtaatgttttgagggaattcaattattttgaggtggattcaaacaatagaattcacctcaaagtagttgaattccctcaaaac 31070447  T
Q  298 attacattccctcaaaatatttccccatccaaa 330  Q
    ||||||||||||||||| | |||||||||||||    
T  31070446 attacattccctcaaaaca-ttccccatccaaa 31070415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 177 - 263
Target Start/End: Original strand, 7302344 - 7302430
Alignment:
Q  177 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||  ||  ||||||||||||| ||||||||    
T  7302344 taagagtgtgtttggatgagggaatgttttgagagaatgtaatgttttgaaggaattcagataccttgaggtgaattccattgtttg 7302430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 183 - 263
Target Start/End: Complemental strand, 21307600 - 21307520
Alignment:
Q  183 tgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||||||| |||||||||||| | |||||||||||||||||||||||||| || |||||||||||||| ||||||||    
T  21307600 tgtgtttggatgggggaatgttttgcgggaatgtaatgttttgagggaattcaaatactttgaggtgaattccattgtttg 21307520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 172 - 300
Target Start/End: Original strand, 28092207 - 28092335
Alignment:
Q  172 ttctctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacc 271  Q
    |||||| ||||| |||||||||| ||||||||||||||  ||||| ||||||||||||||||||| || |||||||||||||| |    | |||| ||||    
T  28092207 ttctcttagagtatgtttggatgggggaatgttttgaggaaatgtgatgttttgagggaattcaattactttgaggtgaattcaaacaatagaattcacc 28092306  T
Q  272 tcaaaataattaaattccctcaaaacatt 300  Q
    |||||| | || |||||||||||||||||    
T  28092307 tcaaaacagttgaattccctcaaaacatt 28092335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 175 - 263
Target Start/End: Complemental strand, 53129919 - 53129831
Alignment:
Q  175 tctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||||||||||||||| |||||||||| ||| |||||||||||||| ||||||||||| || |||| ||||||||| ||||||||    
T  53129919 tctaagagtgtgtttggatgagggaatgtttcgagggaatgtaatgttttaagggaattcaaatactttggggtgaattccattgtttg 53129831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 179 - 261
Target Start/End: Complemental strand, 36398061 - 36397979
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtt 261  Q
    |||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||| || |||| ||||||||| ||||||    
T  36398061 agagtgtgtttggatgggggaatgttttgagggaatgtattgttttgagggaattcaaatactttggggtgaattccattgtt 36397979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 227 - 336
Target Start/End: Original strand, 46672770 - 46672873
Alignment:
Q  227 gggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatc 326  Q
    ||||||||||||| |||||||||||||| |      |||| ||||||||| || || ||||||||||||||||||||||||||||||| ||| |||||||    
T  46672770 gggaattcaactactttgaggtgaattcaa------gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatc 46672863  T
Q  327 caaacacact 336  Q
    ||||||||||    
T  46672864 caaacacact 46672873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 217 - 300
Target Start/End: Complemental strand, 332096 - 332012
Alignment:
Q  217 aatgttttgagggaattcaactattttgaggtgaattctattg-tttgaatccacctcaaaataattaaattccctcaaaacatt 300  Q
    ||||||||||||||||||||||| ||| ||||||||||||||| ||||||| ||||||||| || || |||||||||||||||||    
T  332096 aatgttttgagggaattcaactactttaaggtgaattctattgttttgaattcacctcaaagtagttgaattccctcaaaacatt 332012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 176 - 276
Target Start/End: Original strand, 40929605 - 40929704
Alignment:
Q  176 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaa 275  Q
    ||||||||||||||||||| ||||||||||| ||||||| |||||||  |||  |||||||||||||| |  ||||||||||||||||||| ||||||||    
T  40929605 ctaagagtgtgtttggatg-gggaatgttttcagagaatataatgttcggagaaaattcaactattttaatatgaattctattgtttgaattcacctcaa 40929703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 179 - 263
Target Start/End: Original strand, 47767432 - 47767516
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||| ||  ||||||||||||  ||||||||    
T  47767432 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaaggaattcaaataccttgaggtgaattacattgtttg 47767516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 176 - 263
Target Start/End: Complemental strand, 42006028 - 42005941
Alignment:
Q  176 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||||| |||||| || ||  ||||||||||||  ||||||||    
T  42006028 ctaagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaaggaatttaaataccttgaggtgaatttcattgtttg 42005941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 176 - 261
Target Start/End: Original strand, 34088568 - 34088653
Alignment:
Q  176 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtt 261  Q
    |||||||||||||||||||  | ||||||||||| ||||||| |||||||||||||||||| || |||| ||||||||| ||||||    
T  34088568 ctaagagtgtgtttggatggagaaatgttttgagggaatgtattgttttgagggaattcaaatactttggggtgaattccattgtt 34088653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 247 - 336
Target Start/End: Complemental strand, 39110485 - 39110396
Alignment:
Q  247 gtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||||||||||||||||||| || |||||| || || ||||||| ||||||||||||||| ||||||| |||||  ||||||||||||||    
T  39110485 gtgaattctattgtttgaattcaactcaaagtagttgaattcccacaaaacattacattcgctcaaaacatttcttcatccaaacacact 39110396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 179 - 300
Target Start/End: Complemental strand, 46429555 - 46429434
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaat 278  Q
    |||||||||||||||| |||||| |||||||  ||||||||||||||| ||||||||| |||||||||||| |||| |    | |||| ||||| ||| |    
T  46429555 agagtgtgtttggatgagggaatattttgaggtaatgtaatgttttgaaggaattcaattattttgaggtggattcaaacaatagaattcaccttaaagt 46429456  T
Q  279 aattaaattccctcaaaacatt 300  Q
    | || |||||||||||||||||    
T  46429455 agttgaattccctcaaaacatt 46429434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 175 - 263
Target Start/End: Complemental strand, 671695 - 671607
Alignment:
Q  175 tctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    ||||||||||| |||||||  |||||||||||||| ||||||| |||||||||||||||||  || |||| ||||||||| ||||||||    
T  671695 tctaagagtgtttttggataggggaatgttttgagggaatgtattgttttgagggaattcagatactttggggtgaattccattgtttg 671607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 179 - 263
Target Start/End: Original strand, 37054394 - 37054478
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||||||||||| ||||||||||| || |||||||||||||||| ||||||||| ||  ||||||||||||  ||||||||    
T  37054394 agagtgtgtttggatgggggaatgttttaagggaatgtaatgttttgaaggaattcaaataccttgaggtgaatttcattgtttg 37054478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 179 - 254
Target Start/End: Original strand, 39110394 - 39110469
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattc 254  Q
    ||||||||||||||||  | ||||||||||| ||||||||||||||| ||||||||||||| |||||| |||||||    
T  39110394 agagtgtgtttggatgaagaaatgttttgagcgaatgtaatgttttgtgggaattcaactactttgagttgaattc 39110469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 179 - 248
Target Start/End: Complemental strand, 47284385 - 47284316
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggt 248  Q
    |||||||||||||||| | |||| |||||||  ||||||||||||||||||||||||| |||||||||||    
T  47284385 agagtgtgtttggatgagagaatattttgaggtaatgtaatgttttgagggaattcaattattttgaggt 47284316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 187 - 263
Target Start/End: Original strand, 19475824 - 19475900
Alignment:
Q  187 tttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    ||||||||  ||||||||||||| |||||||||||| ||||| ||||||| || |||||||||||||| ||||||||    
T  19475824 tttggatggaggaatgttttgagggaatgtaatgttatgaggtaattcaaatactttgaggtgaattccattgtttg 19475900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 268 - 336
Target Start/End: Original strand, 42005955 - 42006023
Alignment:
Q  268 cacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    ||||||||  || ||||||||| |||||||||||||||||||||||| ||| |||||||||||||||||    
T  42005955 cacctcaaggtatttaaattccttcaaaacattacattccctcaaaacattcccccatccaaacacact 42006023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 179 - 263
Target Start/End: Original strand, 48947605 - 48947689
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    ||||||||||||||||   |||||||||||| ||||||| ||||||||| |||||||| || |||| ||||||||| ||||||||    
T  48947605 agagtgtgtttggatggaagaatgttttgagggaatgtattgttttgagagaattcaaatactttggggtgaattccattgtttg 48947689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 49457397 - 49457345
Alignment:
Q  284 aattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  49457397 aattccctcaaaacattacattccctcaaaacattcccccatccaaacacact 49457345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 179 - 263
Target Start/End: Complemental strand, 53470501 - 53470417
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||||||||||| || ||||||||||| |||| || |||||||||||||||||| || |||| ||||||||  ||||||||    
T  53470501 agagtgtgtttggatgaggaaatgttttgagggaatctattgttttgagggaattcaaatactttggggtgaatttcattgtttg 53470417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 263 - 334
Target Start/End: Original strand, 21307529 - 21307600
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacaca 334  Q
    |||| ||||||||| || || ||||||||||||||||||||||||| ||||| ||| |||||||||||||||    
T  21307529 gaattcacctcaaagtatttgaattccctcaaaacattacattcccgcaaaacattcccccatccaaacaca 21307600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 217 - 300
Target Start/End: Complemental strand, 25655418 - 25655335
Alignment:
Q  217 aatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacatt 300  Q
    |||||||||| |||||||||||| ||| || ||||||||||| ||||||| || |||||| || || |||||||||||||||||    
T  25655418 aatgttttgacggaattcaactactttaagttgaattctattatttgaattcaactcaaagtagttgaattccctcaaaacatt 25655335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 197 - 263
Target Start/End: Original strand, 30766571 - 30766637
Alignment:
Q  197 ggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    ||||||||||||| |||||||||||||||| ||||||||| ||  ||||||||||||| ||||||||    
T  30766571 ggaatgttttgagggaatgtaatgttttgaaggaattcaaataccttgaggtgaattccattgtttg 30766637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 263 - 336
Target Start/End: Complemental strand, 34088646 - 34088573
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||| |||| |||| || || ||||||||||||||| ||||||||||||||| ||||| |||||||||||||||    
T  34088646 gaattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaacatttctccatccaaacacact 34088573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 35279977 - 35279920
Alignment:
Q  176 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaatt 233  Q
    |||||| |||||||||||| |||||||||||||| ||||||||||||||||| |||||    
T  35279977 ctaagaatgtgtttggatgggggaatgttttgagggaatgtaatgttttgagtgaatt 35279920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 263 - 336
Target Start/End: Original strand, 36397986 - 36398059
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||| |||| |||| || || ||||||||||||||| ||||||||||||||| ||| |||||||||||||||||    
T  36397986 gaattcaccccaaagtatttgaattccctcaaaacaatacattccctcaaaacattcccccatccaaacacact 36398059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 176 - 263
Target Start/End: Original strand, 7976544 - 7976632
Alignment:
Q  176 ctaagagtgtgtttg-gatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    ||||||||||||||  |||| | |||||||||||  |||||||||||||||| |||||| || ||  ||||||||||||||||||||||    
T  7976544 ctaagagtgtgttttagatgagagaatgttttgaaggaatgtaatgttttgaaggaatttaaatacattgaggtgaattctattgtttg 7976632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 179 - 263
Target Start/End: Complemental strand, 31189469 - 31189385
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||||||| ||| | ||||||||||||  |||||||||||||||| |||||||| || |||||||| |||| ||| |||||    
T  31189469 agagtgtgtttgaatgagagaatgttttgaggtaatgtaatgttttgagagaattcaaatactttgaggtaaattttatcgtttg 31189385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 176 - 308
Target Start/End: Original strand, 42130689 - 42130821
Alignment:
Q  176 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaa 275  Q
    |||| ||||||||||| || |||||| |||||||   |||||||||||||||||||||||| ||| || | ||| |||| |    | |||| ||||||||    
T  42130689 ctaatagtgtgtttgggtgggggaatattttgaggtgatgtaatgttttgagggaattcaattatctttaagtggattcaaagagtagaattcacctcaa 42130788  T
Q  276 aataattaaattccctcaaaacattacattccc 308  Q
    | ||||| |||||||| |||| |||||||||||    
T  42130789 agtaattgaattccctaaaaagattacattccc 42130821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 47767486 - 47767434
Alignment:
Q  284 aattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||||| |||||||||||||||||||||||| ||| |||||||||||||||||    
T  47767486 aattccttcaaaacattacattccctcaaaacattcccccatccaaacacact 47767434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 179 - 254
Target Start/End: Original strand, 37321550 - 37321625
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattc 254  Q
    ||||||| |||||||| |||||| |||||||  || |||||||||||||| |||||||||| ||| ||||||||||    
T  37321550 agagtgtatttggatgggggaatattttgaggaaaagtaatgttttgaggaaattcaactactttaaggtgaattc 37321625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 284 - 334
Target Start/End: Original strand, 35279920 - 35279970
Alignment:
Q  284 aattccctcaaaacattacattccctcaaaatatttccccatccaaacaca 334  Q
    ||||| ||||||||||||||||||||||||| ||| |||||||||||||||    
T  35279920 aattcactcaaaacattacattccctcaaaacattcccccatccaaacaca 35279970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 217 - 266
Target Start/End: Complemental strand, 38506910 - 38506861
Alignment:
Q  217 aatgttttgagggaattcaactattttgaggtgaattctattgtttgaat 266  Q
    |||||||||||||||||||| || |||||||||||||| |||||||||||    
T  38506910 aatgttttgagggaattcaaataatttgaggtgaattccattgtttgaat 38506861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 182 - 263
Target Start/End: Original strand, 52527039 - 52527120
Alignment:
Q  182 gtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    ||||||||||||| |||||||||||||  | |||||||||| ||  ||||||||| || |||||||| ||||| ||||||||    
T  52527039 gtgtgtttggatgggggaatgttttgaagggatgtaatgttatggaggaattcaaatactttgaggtaaattccattgtttg 52527120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 37054448 - 37054396
Alignment:
Q  284 aattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||||| ||||||||||||||||||| |||| ||| |||||||||||||||||    
T  37054448 aattccttcaaaacattacattcccttaaaacattcccccatccaaacacact 37054396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 46001418 - 46001366
Alignment:
Q  284 aattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    ||||||||| |||||||||||| |||||||||||| | |||||||||||||||    
T  46001418 aattccctcgaaacattacattacctcaaaatattccgccatccaaacacact 46001366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 284 - 336
Target Start/End: Original strand, 53470447 - 53470499
Alignment:
Q  284 aattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    ||||||||||||||| || |||||||||||| |||||| ||||||||||||||    
T  53470447 aattccctcaaaacaatagattccctcaaaacatttcctcatccaaacacact 53470499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 175 - 266
Target Start/End: Original strand, 21730898 - 21730988
Alignment:
Q  175 tctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaat 266  Q
    |||||||||||||||||||| ||||||||  | ||   |||||||||||||| ||||||||| || |||||| ||||||  |||||||||||    
T  21730898 tctaagagtgtgtttggatgagggaatgtcctaaggttatgtaatgttttgaaggaattcaaata-tttgagatgaatttcattgtttgaat 21730988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 176 - 235
Target Start/End: Original strand, 46001361 - 46001420
Alignment:
Q  176 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattca 235  Q
    |||||||||||||||||||  ||||| |||||||  |||||||||||| |||||||||||    
T  46001361 ctaagagtgtgtttggatggcggaatattttgaggtaatgtaatgtttcgagggaattca 46001420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 217 - 254
Target Start/End: Original strand, 332012 - 332049
Alignment:
Q  217 aatgttttgagggaattcaactattttgaggtgaattc 254  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  332012 aatgttttgagggaattcaactactttgaggtgaattc 332049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 206 - 263
Target Start/End: Original strand, 8762153 - 8762210
Alignment:
Q  206 tgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    ||||| ||||||||||| ||||||||||||| || ||||| |||||||| ||||||||    
T  8762153 tgagataatgtaatgttatgagggaattcaaatactttgatgtgaattccattgtttg 8762210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 263 - 336
Target Start/End: Complemental strand, 37321625 - 37321552
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||| ||||| ||| || || |||| |||||||||||||| || |||||||||||| ||||||||||| |||||    
T  37321625 gaattcaccttaaagtagttgaatttcctcaaaacattacttttcctcaaaatattcccccatccaaatacact 37321552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 181 - 254
Target Start/End: Complemental strand, 39215995 - 39215922
Alignment:
Q  181 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattc 254  Q
    |||||||||||||| | |||| |||||||  ||| ||||||||||||  ||||||| |||||||||||| ||||    
T  39215995 agtgtgtttggatgagagaatattttgaggtaatataatgttttgagaaaattcaattattttgaggtggattc 39215922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 46635857 - 46635914
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaa 236  Q
    |||||||||||||||| |  |||||||||||  ||||||||||||||||| |||||||    
T  46635857 agagtgtgtttggatgagaaaatgttttgagctaatgtaatgttttgaggaaattcaa 46635914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 263 - 336
Target Start/End: Original strand, 53129840 - 53129913
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||| |||| |||| || || |||||||| |||||||||||||||||| ||| ||| || ||||||||||||||    
T  53129840 gaattcaccccaaagtatttgaattcccttaaaacattacattccctcgaaacattccctcatccaaacacact 53129913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 284 - 336
Target Start/End: Original strand, 671637 - 671689
Alignment:
Q  284 aattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    ||||||||||||||| ||||||||||||||| ||| ||| ||||||| |||||    
T  671637 aattccctcaaaacaatacattccctcaaaacattcccctatccaaaaacact 671689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 7302400 - 7302348
Alignment:
Q  284 aattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||||| |||||||||||||||| ||||||| ||| || ||||||||||||||    
T  7302400 aattccttcaaaacattacattctctcaaaacattccctcatccaaacacact 7302348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 195 - 263
Target Start/End: Complemental strand, 50168666 - 50168598
Alignment:
Q  195 tgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||||||||||||||  ||||||||||||||||| || |||| || ||| || ||||||| ||||||||    
T  50168666 tgggaatgttttgaggtaatgtaatgttttgaggaaactcaaataattttagctgaattccattgtttg 50168598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 263 - 330
Target Start/End: Complemental strand, 19475891 - 19475824
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaa 330  Q
    |||| ||||||||| || || |||| ||||| |||||||||||||||||||| ||| | |||||||||    
T  19475891 gaattcacctcaaagtatttgaattacctcataacattacattccctcaaaacattcctccatccaaa 19475824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 263 - 334
Target Start/End: Complemental strand, 47336956 - 47336885
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacaca 334  Q
    |||| ||||| || ||| |||||||  |||||||||||||||| ||| |||| ||||||||||||| |||||    
T  47336956 gaattcacctaaacatatttaaattatctcaaaacattacattaccttaaaacatttccccatccacacaca 47336885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 263
Target Start/End: Original strand, 2104772 - 2104818
Alignment:
Q  217 aatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    ||||||| |||||||||||| || ||||| |||||||||||||||||    
T  2104772 aatgtttcgagggaattcaaatactttgatgtgaattctattgtttg 2104818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 294 - 336
Target Start/End: Complemental strand, 2732683 - 2732641
Alignment:
Q  294 aaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||||||| ||| |||||||| |||||||||||||||||||||    
T  2732683 aaacattatattacctcaaaacatttccccatccaaacacact 2732641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 13176600 - 13176550
Alignment:
Q  213 atgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    ||||||||||||||||||||||||  | ||| ||||| |||||||||||||    
T  13176600 atgtaatgttttgagggaattcaaagacttttaggtggattctattgtttg 13176550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 236
Target Start/End: Original strand, 30767099 - 30767161
Alignment:
Q  174 ctctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaa 236  Q
    |||| ||||||| |||||||| || ||||||||||| |||| ||||||| ||| |||||||||    
T  30767099 ctcttagagtgtatttggatggggtaatgttttgagggaatctaatgttatgaaggaattcaa 30767161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 336
Target Start/End: Complemental strand, 25655350 - 25655317
Alignment:
Q  303 attccctcaaaatatttccccatccaaacacact 336  Q
    |||||||||||| |||||||||||||||||||||    
T  25655350 attccctcaaaacatttccccatccaaacacact 25655317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 254
Target Start/End: Original strand, 25655335 - 25655372
Alignment:
Q  217 aatgttttgagggaattcaactattttgaggtgaattc 254  Q
    ||||||||||||||||||||||| |||||| |||||||    
T  25655335 aatgttttgagggaattcaactactttgagttgaattc 25655372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 272 - 321
Target Start/End: Original strand, 34936658 - 34936707
Alignment:
Q  272 tcaaaataattaaattccctcaaaacattacattccctcaaaatatttcc 321  Q
    |||||||| |||||| | |||||||||||||||| || ||||||||||||    
T  34936658 tcaaaatatttaaatactctcaaaacattacattaccgcaaaatatttcc 34936707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 336
Target Start/End: Complemental strand, 48947680 - 48947607
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||| |||| |||| || || ||||| ||||||||| ||||||||||||||| |||   |||||||||||||||    
T  48947680 gaattcaccccaaagtatttgaattctctcaaaacaatacattccctcaaaacattcttccatccaaacacact 48947607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 21264008 - 21264056
Alignment:
Q  91 ttcttatgtttaattgatcatctccatatttattctttagtttgattga 139  Q
    ||||| ||||| ||||||||||||||| || ||||||| ||||||||||    
T  21264008 ttcttttgtttgattgatcatctccatgttgattcttttgtttgattga 21264056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 208
Target Start/End: Complemental strand, 25655445 - 25655409
Alignment:
Q  172 ttctctaagagtgtgtttggatgtgggaatgttttga 208  Q
    ||||||||||||||||||||||| || ||||||||||    
T  25655445 ttctctaagagtgtgtttggatggggaaatgttttga 25655409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 30767158 - 30767106
Alignment:
Q  284 aattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||||| ||| ||||||| |||||||||||| ||| ||||||||||| |||||    
T  30767158 aattccttcataacattagattccctcaaaacattaccccatccaaatacact 30767106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 46635911 - 46635859
Alignment:
Q  284 aattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||| |||||||||||||||||  ||||||| |||| | ||||||||||||||    
T  46635911 aatttcctcaaaacattacattagctcaaaacattttctcatccaaacacact 46635859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 183 - 263
Target Start/End: Original strand, 47336885 - 47336965
Alignment:
Q  183 tgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    ||||| |||||| || |||||||| ||  ||||||||||||||||  |||| || ||| || |||||||||| ||||||||    
T  47336885 tgtgtgtggatggggaaatgttttaaggtaatgtaatgttttgagataatttaaatatgtttaggtgaattccattgtttg 47336965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562 (Bit Score: 101; Significance: 7e-50; HSPs: 2)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 175 - 339
Target Start/End: Original strand, 401 - 565
Alignment:
Q  175 tctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctca 274  Q
    |||||||||||||||||||| |||||| ||||||| |||  |||||||||||||||||||||||| ||   ||||||||||||||||||||  |||||||    
T  401 tctaagagtgtgtttggatgggggaatattttgagggaaaataatgttttgagggaattcaactacttcagggtgaattctattgtttgaactcacctca 500  T
Q  275 aaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacactata 339  Q
    || || || ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  501 aagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactata 565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 181 - 336
Target Start/End: Complemental strand, 562 - 407
Alignment:
Q  181 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataa 280  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||| |    | |||| ||||   || ||     
T  562 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgagttcaaacaatagaattcaccctgaagtag 463  T
Q  281 ttaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    || ||||||||||||||||||  ||||||||||||||| |||||||||||||||||    
T  462 ttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacact 407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158 (Bit Score: 101; Significance: 7e-50; HSPs: 2)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 175 - 339
Target Start/End: Complemental strand, 2192 - 2028
Alignment:
Q  175 tctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctca 274  Q
    |||||||||||||||||||| |||||| ||||||| |||  |||||||||||||||||||||||| ||   ||||||||||||||||||||  |||||||    
T  2192 tctaagagtgtgtttggatgggggaatattttgagggaaaataatgttttgagggaattcaactacttcagggtgaattctattgtttgaactcacctca 2093  T
Q  275 aaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacactata 339  Q
    || || || ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  2092 aagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactata 2028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 181 - 336
Target Start/End: Original strand, 2031 - 2186
Alignment:
Q  181 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataa 280  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||| |    | |||| ||||   || ||     
T  2031 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgagttcaaacaatagaattcaccctgaagtag 2130  T
Q  281 ttaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    || ||||||||||||||||||  ||||||||||||||| |||||||||||||||||    
T  2131 ttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacact 2186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 82; Significance: 1e-38; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 183 - 308
Target Start/End: Complemental strand, 56429 - 56304
Alignment:
Q  183 tgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataatt 282  Q
    |||||||||||| |||||| ||||||| ||| ||||||||||||||||||||||||| ||| |||||||||||||||||||||  ||||||||| || ||    
T  56429 tgtgtttggatgagggaatattttgagggaaagtaatgttttgagggaattcaactactttaaggtgaattctattgtttgaactcacctcaaagtagtt 56330  T
Q  283 aaattccctcaaaacattacattccc 308  Q
     |||||||||||||||||||||||||    
T  56329 gaattccctcaaaacattacattccc 56304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 211 - 334
Target Start/End: Original strand, 56306 - 56429
Alignment:
Q  211 gaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaaataattaaattccctcaaaacattacattccctc 310  Q
    ||||||||||||||||||||||||||||| |||||||||| ||| |    | |||| ||||| ||| || || ||||||||||||||||||| |||||||    
T  56306 gaatgtaatgttttgagggaattcaactactttgaggtgagttcaaacaatagaattcaccttaaagtagttgaattccctcaaaacattactttccctc 56405  T
Q  311 aaaatatttccccatccaaacaca 334  Q
    |||||||| || ||||||||||||    
T  56406 aaaatattccctcatccaaacaca 56429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 68; Significance: 3e-30; HSPs: 2)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 176 - 263
Target Start/End: Original strand, 4072 - 4159
Alignment:
Q  176 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    ||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  4072 ctaagagtgtgtttggataaaggaatgttttgagagaatgtaatgttttgagggaattcaaatactttgaggtgaattctattgtttg 4159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 263 - 336
Target Start/End: Complemental strand, 4150 - 4077
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||| ||||||||| || || ||||||||||||||||||||||| ||||||| ||| |   |||||||||||||    
T  4150 gaattcacctcaaagtatttgaattccctcaaaacattacattctctcaaaacattcctttatccaaacacact 4077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 61; Significance: 5e-26; HSPs: 2)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 181 - 261
Target Start/End: Original strand, 82945 - 83025
Alignment:
Q  181 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtt 261  Q
    |||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  82945 agtgtgtttggatgggtgaatgttttgagggaatgtaatgttttgagggaattcaactactttaaggtgaattctattgtt 83025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 263 - 336
Target Start/End: Complemental strand, 83018 - 82945
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||| ||||| ||| || || ||||||||||||||||||||||||||||||| |||  ||||||||||||||||    
T  83018 gaattcaccttaaagtagttgaattccctcaaaacattacattccctcaaaacattcacccatccaaacacact 82945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 60; Significance: 2e-25; HSPs: 4)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 179 - 258
Target Start/End: Original strand, 41997 - 42076
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctatt 258  Q
    |||||||||||| |||  ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  41997 agagtgtgtttgaatggaggaatgttttgagggaatgtaatgttttgagggaattcaactactttgaggtgaattctatt 42076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 177 - 236
Target Start/End: Complemental strand, 42139 - 42080
Alignment:
Q  177 taagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaa 236  Q
    |||||||||||||||||| ||||| |||||||| ||||||||||||||||| ||||||||    
T  42139 taagagtgtgtttggatgggggaacgttttgagggaatgtaatgttttgagagaattcaa 42080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 263 - 336
Target Start/End: Complemental strand, 42072 - 41999
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||| ||||||||| || || ||||||||||||||||||||||||||||||| ||| | |||| ||||||||||    
T  42072 gaattcacctcaaagtagttgaattccctcaaaacattacattccctcaaaacattcctccattcaaacacact 41999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 284 - 336
Target Start/End: Original strand, 42083 - 42135
Alignment:
Q  284 aattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    ||||| |||||||||||||||||||||||||  || |||||||||||||||||    
T  42083 aattctctcaaaacattacattccctcaaaacgttcccccatccaaacacact 42135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 179 - 263
Target Start/End: Original strand, 2867 - 2950
Alignment:
Q  179 agagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    ||||||||||| |||| |||||||||| |||||||||||||||||||||||||||||| || |||||||||||||| ||||||||    
T  2867 agagtgtgtttagatgggggaatgtttcgagagaatgtaatgttttgagggaattcaaata-tttgaggtgaattccattgtttg 2950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 275 - 336
Target Start/End: Complemental strand, 2930 - 2869
Alignment:
Q  275 aaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    ||||| || ||||||||||||||||||||||| ||| ||| ||| ||||||| |||||||||    
T  2930 aaatatttgaattccctcaaaacattacattctctcgaaacattcccccatctaaacacact 2869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 56; Significance: 5e-23; HSPs: 2)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 180 - 263
Target Start/End: Complemental strand, 4570 - 4487
Alignment:
Q  180 gagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    ||||||||||||||| |||||||||||||| |||| ||||||||||||| ||||||| ||||||| ||||||||| ||||||||    
T  4570 gagtgtgtttggatgagggaatgttttgagggaatataatgttttgaggaaattcaaatattttggggtgaattccattgtttg 4487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 263 - 336
Target Start/End: Original strand, 4496 - 4569
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||| |||| ||||||| || |||| ||||||||||||| |||||||||||| ||| || ||||||||||||||    
T  4496 gaattcaccccaaaatatttgaatttcctcaaaacattatattccctcaaaacattccctcatccaaacacact 4569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 56; Significance: 5e-23; HSPs: 2)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 180 - 263
Target Start/End: Complemental strand, 5214 - 5131
Alignment:
Q  180 gagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    ||||||||||||||| |||||||||||||| |||| ||||||||||||| ||||||| ||||||| ||||||||| ||||||||    
T  5214 gagtgtgtttggatgagggaatgttttgagggaatataatgttttgaggaaattcaaatattttggggtgaattccattgtttg 5131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 263 - 336
Target Start/End: Original strand, 5140 - 5213
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||| |||| ||||||| || |||| ||||||||||||| |||||||||||| ||| || ||||||||||||||    
T  5140 gaattcaccccaaaatatttgaatttcctcaaaacattatattccctcaaaacattccctcatccaaacacact 5213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 51; Significance: 5e-20; HSPs: 4)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 176 - 262
Target Start/End: Original strand, 19195 - 19280
Alignment:
Q  176 ctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgttt 262  Q
    |||| |||||||||||||| |||| | ||||||| |||||||||||||||| ||||||||| ||||||||||||||||| |||||||    
T  19195 ctaaaagtgtgtttggatgggggagtattttgagggaatgtaatgttttga-ggaattcaaatattttgaggtgaattccattgttt 19280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 263 - 336
Target Start/End: Complemental strand, 19272 - 19200
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||| |||||||||||| || |||||| |||||||||||||||||||||||||| | |||||||||||||||||    
T  19272 gaattcacctcaaaatatttgaattcc-tcaaaacattacattccctcaaaatactcccccatccaaacacact 19200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 181 - 253
Target Start/End: Complemental strand, 19855 - 19784
Alignment:
Q  181 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaatt 253  Q
    |||||||||||||| |||| ||||||||| |||||||||||||| ||  ||||||| || |||||||||||||    
T  19855 agtgtgtttggatggggga-tgttttgagggaatgtaatgttttaagaaaattcaaatactttgaggtgaatt 19784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 268 - 337
Target Start/End: Original strand, 19788 - 19856
Alignment:
Q  268 cacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacacta 337  Q
    ||||||||| || || ||||  || |||||||||||||||||||||| | | ||||||||||||||||||    
T  19788 cacctcaaagtatttgaattttcttaaaacattacattccctcaaaaca-tcccccatccaaacacacta 19856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 44; Significance: 7e-16; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 180 - 263
Target Start/End: Original strand, 10887 - 10970
Alignment:
Q  180 gagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    ||||||||||| |||   ||||||||| || |||||||||||||||||||||||||| || ||||| |||||||| ||||||||    
T  10887 gagtgtgtttgaatggaagaatgttttaagggaatgtaatgttttgagggaattcaaatactttgacgtgaattccattgtttg 10970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 336
Target Start/End: Complemental strand, 10961 - 10888
Alignment:
Q  263 gaatccacctcaaaataattaaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||| ||| ||||| || || |||||||||||||||||||||||||| |||| |||   |||| ||||||||||    
T  10961 gaattcacgtcaaagtatttgaattccctcaaaacattacattcccttaaaacattcttccattcaaacacact 10888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 181 - 263
Target Start/End: Original strand, 7153 - 7235
Alignment:
Q  181 agtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    ||||||||||||||  ||||||||||||| ||||||| |||||| ||||||||||| || ||||  |||||||| ||||||||    
T  7153 agtgtgtttggatggaggaatgttttgagggaatgtattgttttaagggaattcaaatactttggagtgaattccattgtttg 7235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 7205 - 7153
Alignment:
Q  284 aattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 336  Q
    |||||||| |||||| ||||||||||||||| ||| | |||||||||||||||    
T  7205 aattcccttaaaacaatacattccctcaaaacattcctccatccaaacacact 7153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 217 - 276
Target Start/End: Complemental strand, 17620 - 17561
Alignment:
Q  217 aatgttttgagggaattcaactattttgaggtgaattctattgtttgaatccacctcaaa 276  Q
    ||||||||||||||||||||||  ||||||||| ||| |||||||||  |||||||||||    
T  17620 aatgttttgagggaattcaactcctttgaggtgcattttattgtttggttccacctcaaa 17561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 172 - 263
Target Start/End: Complemental strand, 15943 - 15855
Alignment:
Q  172 ttctctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||| |||||||||||||||||| |||| ||||||| | |||||||||| | |||| |||||||| || ||  |||||||||| ||||||||    
T  15943 ttctttaagagtgtgtttggatgggggattgttttg-gggaatgtaatgctatgagagaattcaaatactt--aggtgaattccattgtttg 15855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 172 - 263
Target Start/End: Complemental strand, 2985 - 2897
Alignment:
Q  172 ttctctaagagtgtgtttggatgtgggaatgttttgagagaatgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    |||| |||||||||||||||||| |||| ||||||| | |||||||||| | |||| |||||||| || ||  |||||||||| ||||||||    
T  2985 ttctttaagagtgtgtttggatgggggattgttttg-gggaatgtaatgctatgagagaattcaaatactt--aggtgaattccattgtttg 2897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 130388 - 130438
Alignment:
Q  213 atgtaatgttttgagggaattcaactattttgaggtgaattctattgtttg 263  Q
    ||||||||||||||||||||||||  | ||| ||||| |||||||||||||    
T  130388 atgtaatgttttgagggaattcaaagacttttaggtggattctattgtttg 130438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 253
Target Start/End: Complemental strand, 221236 - 221195
Alignment:
Q  212 aatgtaatgttttgagggaattcaactattttgaggtgaatt 253  Q
    ||||||||||||| ||||||||||| ||||||| ||||||||    
T  221236 aatgtaatgttttaagggaattcaaatattttggggtgaatt 221195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University