View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19368_high_65 (Length: 233)
Name: NF19368_high_65
Description: NF19368
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19368_high_65 |
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Alignment Details
Target: chr7 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 3 - 217
Target Start/End: Original strand, 38463395 - 38463601
Alignment:
| Q |
3 |
gcgtttaagaactcaagtaactaaacaaaaaa-cacatatgaagaccaatctaactaaagatatattcaagaatatttttgtaattttggttaactcaag |
101 |
Q |
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| T |
38463395 |
gcgtttaagaactcaagtaactaaacaaaaaaacacatatgaagaccaatct-------gatatattcaagaatatttttgtaattttggttaactcaag |
38463487 |
T |
|
| Q |
102 |
aactatagtaatcacgcatcatacattgaaattgaaagattaaaatgattgtttactcaaactaaaaccatatatatgatgttgaagttaatagatatta |
201 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
38463488 |
aactatagtaatcacgcatcatacattgaaattgaaagattaaaatgattgtttgctcaaactaaaac--tatatatgatgttgaagttaatagatatta |
38463585 |
T |
|
| Q |
202 |
tttaggttcatgagag |
217 |
Q |
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|||||||||||||||| |
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| T |
38463586 |
tttaggttcatgagag |
38463601 |
T |
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