View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19368_low_45 (Length: 318)
Name: NF19368_low_45
Description: NF19368
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19368_low_45 |
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Alignment Details
Target: chr2 (Bit Score: 285; Significance: 1e-160; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 14 - 302
Target Start/End: Original strand, 4935324 - 4935612
Alignment:
| Q |
14 |
aaaatacaaaggatcagattgtacctaagacggttcggactttttcaagtgcttcttctgaaataggtccttcaggagacaaggaagccttgcagacgtc |
113 |
Q |
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| T |
4935324 |
aaaatacaaaggatcagattgtacctaagacggttcggactttttcaagtgcttcttctgaaataggtccttcaggagacaaggaagccttgcagacgtc |
4935423 |
T |
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| Q |
114 |
atacaatttctgaatatacggcattgtactcaacaattcttaaacaatcaatgtagcagctagaatttcagatttcagaatccaataaaacaatgaaact |
213 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
4935424 |
atacaatttctgaatatacggcattgtactcaacaattcttaaacaatcaatgtagcagttagaatttcagatttcagaatccaataaaacaatgaaact |
4935523 |
T |
|
| Q |
214 |
tggatccaaaatatcactcaggtcgctagaatccaatcaaaacagcaaaagaaacagcttcatttctacgcaacaaaacatgtgcatga |
302 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4935524 |
tggatccaaaatatcactcaggtcgctagaatccaatcaaaacagcaaaagaaacagcttcatttctacgcaacaaaacatgtgcatga |
4935612 |
T |
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