View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19368_low_59 (Length: 250)
Name: NF19368_low_59
Description: NF19368
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19368_low_59 |
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Alignment Details
Target: chr1 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 10 - 235
Target Start/End: Original strand, 7022286 - 7022511
Alignment:
| Q |
10 |
attattctagtggtcgaaactcacattttaaatatggaaaagtgagttgtttataatttgaactctgatcactatatattttctctatcaattgagttaa |
109 |
Q |
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| T |
7022286 |
attattctagtggtcgaaactaacattttaaatgtgaaaaagtgagctgtttataattcgaactctgatctctatatattttctctatcaattgagttaa |
7022385 |
T |
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| Q |
110 |
gctcaggagacaacttatacttctttatataccaacaaaagaagctgatacctctattgagtttattgtttaatttaaagcaaatgatatctctgttgtt |
209 |
Q |
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|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7022386 |
gctcaggagacaacttatacttgtttatataccaacaaaagaagctgatacctctattgagtttattgtttaatttaaagcaaatgatatctctgttgtt |
7022485 |
T |
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| Q |
210 |
cataaaggctacatccctcttatata |
235 |
Q |
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|||||||||||||||||||||||||| |
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| T |
7022486 |
cataaaggctacatccctcttatata |
7022511 |
T |
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