View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19368_low_68 (Length: 226)
Name: NF19368_low_68
Description: NF19368
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19368_low_68 |
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Alignment Details
Target: chr8 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 30903065 - 30902851
Alignment:
| Q |
1 |
cacaaaattatagtgttagagcaaaaccctctcttcttcaatagaattcacatctctttatctcttatcaatttaagtcaagtcttatcctaaatcgcac |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
30903065 |
cacaaaattatagtgttagagcaaaaccctctcttcttcaatagaattcacatctctttatctcttatcaatttaagtcaagtcttatcctaaaacgcac |
30902966 |
T |
|
| Q |
101 |
caatactcactcaactcaaaccttcctctacttctcaactataagtacctacctcaattattcaacttcccaaaacacaacac-----aacataacacct |
195 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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|
| T |
30902965 |
caatactcactcaactcaaaccttcctctacttctcaactataagtacctacctcaattattcaacttcccaaaacacaacacaacacaacataacacct |
30902866 |
T |
|
| Q |
196 |
tattctcttctttct |
210 |
Q |
| |
|
||||||||||||||| |
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|
| T |
30902865 |
tattctcttctttct |
30902851 |
T |
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