View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1936_high_26 (Length: 252)
Name: NF1936_high_26
Description: NF1936
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1936_high_26 |
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Alignment Details
Target: chr8 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 36829891 - 36830127
Alignment:
| Q |
1 |
aatttaaatagatcattaaccgacggtataaattaaaaccaagaacattattttctcatattaacaaaattttatgaatgtatggtcaatttcttacaat |
100 |
Q |
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| T |
36829891 |
aatttaaatagatcattaaccgacagtataaattaaaaccaagaacattattttctcatattaacaaaattttatgaatctatggtcaatttcttacaat |
36829990 |
T |
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| Q |
101 |
aaacgacagaaaaatggttcaaaagctagaggctcactatcataccaaatcgacaaggtcattacatgaccttgtatgtttttacacttcatctaaatcc |
200 |
Q |
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| T |
36829991 |
acacgacagaaaaatggttcaaaagctagaggctcacaatcataccaaatcgacaaggtcattacatgaccttgtatgtttttacacttcatctaaatcc |
36830090 |
T |
|
| Q |
201 |
aaatgtgctaaacaaatggtggcaatatacaccaagt |
237 |
Q |
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|||||||||||||||||||||||||||||||| |||| |
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| T |
36830091 |
aaatgtgctaaacaaatggtggcaatatacactaagt |
36830127 |
T |
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