View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19371_low_19 (Length: 246)
Name: NF19371_low_19
Description: NF19371
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19371_low_19 |
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Alignment Details
Target: chr7 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 19 - 229
Target Start/End: Original strand, 36887729 - 36887936
Alignment:
| Q |
19 |
attagaaaatcaagattcaacagtgataatccagattctggaacaattatcgaagttaccttcggctgaatgagttaacgccaagctctgagaaatcaaa |
118 |
Q |
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| T |
36887729 |
attagaaaatcaagattcaacagtgataatccagattctggaaaaattatcgaagttaccttcggctgaatgagttaacgccaagctctgagaaatcaaa |
36887828 |
T |
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| Q |
119 |
attgaggagaagagaaccagattgagaagcaggtaaaggaagttacgaatcatttttctgagaattggaagaaactattaacgatgctctttgttcttct |
218 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |
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| T |
36887829 |
attgaggagaagagaaccagattgagaagcaggtaaaggaagttacgaatcatttttctgagaattg---gaaactattaacaatgctctttgttcttct |
36887925 |
T |
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| Q |
219 |
tttcctgaaaa |
229 |
Q |
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||||||||||| |
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| T |
36887926 |
tttcctgaaaa |
36887936 |
T |
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