View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19372_high_39 (Length: 223)
Name: NF19372_high_39
Description: NF19372
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19372_high_39 |
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Alignment Details
Target: chr8 (Bit Score: 175; Significance: 2e-94; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 15 - 204
Target Start/End: Complemental strand, 36291333 - 36291143
Alignment:
| Q |
15 |
ttagcgaggaacctttcaatt-ctcaaacattgaagacccttctagtaagtaactgccaaattgtaactccaattcccctgtaaacctcaactaaactcc |
113 |
Q |
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| T |
36291333 |
ttagcgaggaacctttcaattgctcaaacattgaagaccctcctagtaagtaactgccaaattgtaactccaattcccctgtaaacctcaactaaactcc |
36291234 |
T |
|
| Q |
114 |
attagctacaagataccaatcgaccctctttcccttcatttcattttccccttaattaggcactctataaatatgcatttcagctaaacct |
204 |
Q |
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|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36291233 |
attaactacaagataccaatcgaccctctttcccttcatttcattttccccttaattaggcactctataaatatgcatttcagctaaacct |
36291143 |
T |
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