View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19372_high_43 (Length: 201)
Name: NF19372_high_43
Description: NF19372
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19372_high_43 |
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Alignment Details
Target: chr4 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 38427712 - 38427527
Alignment:
| Q |
1 |
ttaccacatgtggacttgcatttcttaaaataacaaccttccttgagaccgattagttattcacataagttacaatcacacaacattttatatttcaaaa |
100 |
Q |
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| T |
38427712 |
ttaccacatgtggacttgcatttcttaaaataacaaccttccttgagaccgattagttattcacataagttacaatcacacaacattttatatttcaaaa |
38427613 |
T |
|
| Q |
101 |
taaattaatttccacaaaagagatcactttgacgacataatgtttcaatcaactcatctcaaactatatacataaactgtcctatg |
186 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38427612 |
taaattaatttccacaaaagagatcactttgacgacataatgtttcaatcaactcatctcaaactatatacataaactgtcctatg |
38427527 |
T |
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